ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63d02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 468 bits (236), Expect = e-128 Identities = 481/562 (85%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 50 tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 109 ||||| ||||||||||||| ||| | ||| ||||||||| || | ||||||||||||| Sbjct: 7099820 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 7099761 Query: 110 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 169 ||||| | | |||| | |||||||||||||| || |||||| ||||||||||||||| Sbjct: 7099760 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 7099701 Query: 170 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 229 | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| |||| Sbjct: 7099700 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7099641 Query: 230 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 289 ||||||||| | || |||||||||| || || |||||||||||||||| | | Sbjct: 7099640 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7099584 Query: 290 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 349 ||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||| Sbjct: 7099583 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7099524 Query: 350 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 409 |||| ||||| |||||||| || ||||| || || || || |||| ||||||||||||| Sbjct: 7099523 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7099464 Query: 410 gaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgc 469 | ||||||||| |||| ||||||||| |||||||||| ||||||||||| || ||||||| Sbjct: 7099463 gtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgc 7099404 Query: 470 ttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattggga 529 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 7099403 tcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattggga 7099344 Query: 530 ggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttag 589 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7099343 ggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttgg 7099284 Query: 590 agctttcattggaggaagctcg 611 ||||||||||||| |||||||| Sbjct: 7099283 agctttcattggaagaagctcg 7099262
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 468 bits (236), Expect = e-128 Identities = 481/562 (85%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 50 tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 109 ||||| ||||||||||||| ||| | ||| ||||||||| || | ||||||||||||| Sbjct: 7099699 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 7099640 Query: 110 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 169 ||||| | | |||| | |||||||||||||| || |||||| ||||||||||||||| Sbjct: 7099639 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 7099580 Query: 170 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 229 | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| |||| Sbjct: 7099579 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7099520 Query: 230 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 289 ||||||||| | || |||||||||| || || |||||||||||||||| | | Sbjct: 7099519 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7099463 Query: 290 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 349 ||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||| Sbjct: 7099462 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7099403 Query: 350 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 409 |||| ||||| |||||||| || ||||| || || || || |||| ||||||||||||| Sbjct: 7099402 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7099343 Query: 410 gaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgc 469 | ||||||||| |||| ||||||||| |||||||||| ||||||||||| || ||||||| Sbjct: 7099342 gtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgc 7099283 Query: 470 ttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattggga 529 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 7099282 tcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattggga 7099223 Query: 530 ggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttag 589 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7099222 ggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttgg 7099163 Query: 590 agctttcattggaggaagctcg 611 ||||||||||||| |||||||| Sbjct: 7099162 agctttcattggaagaagctcg 7099141
>emb|AL928782.4|CNS08CCC Oryza sativa chromosome 12, . BAC OSJNBb0069I24 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 68450 Score = 468 bits (236), Expect = e-128 Identities = 481/562 (85%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 50 tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 109 ||||| ||||||||||||| ||| | ||| ||||||||| || | ||||||||||||| Sbjct: 67506 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 67447 Query: 110 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 169 ||||| | | |||| | |||||||||||||| || |||||| ||||||||||||||| Sbjct: 67446 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 67387 Query: 170 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 229 | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| |||| Sbjct: 67386 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 67327 Query: 230 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 289 ||||||||| | || |||||||||| || || |||||||||||||||| | | Sbjct: 67326 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 67270 Query: 290 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 349 ||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||| Sbjct: 67269 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 67210 Query: 350 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 409 |||| ||||| |||||||| || ||||| || || || || |||| ||||||||||||| Sbjct: 67209 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 67150 Query: 410 gaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgc 469 | ||||||||| |||| ||||||||| |||||||||| ||||||||||| || ||||||| Sbjct: 67149 gtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgc 67090 Query: 470 ttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattggga 529 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 67089 tcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattggga 67030 Query: 530 ggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttag 589 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 67029 ggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttgg 66970 Query: 590 agctttcattggaggaagctcg 611 ||||||||||||| |||||||| Sbjct: 66969 agctttcattggaagaagctcg 66948
>emb|BX842241.1|CNS0B0PM Oryza sativa chromosome 12, . Partial sequence from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 45687 Score = 468 bits (236), Expect = e-128 Identities = 481/562 (85%), Gaps = 3/562 (0%) Strand = Plus / Minus Query: 50 tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 109 ||||| ||||||||||||| ||| | ||| ||||||||| || | ||||||||||||| Sbjct: 8120 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 8061 Query: 110 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 169 ||||| | | |||| | |||||||||||||| || |||||| ||||||||||||||| Sbjct: 8060 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 8001 Query: 170 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 229 | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| |||| Sbjct: 8000 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 7941 Query: 230 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 289 ||||||||| | || |||||||||| || || |||||||||||||||| | | Sbjct: 7940 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 7884 Query: 290 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 349 ||||||||||||||||| |||||||||||| ||||||| ||||| || |||||||||| Sbjct: 7883 gacggggaaggcgtgctcgctttgtaaccagatcgatgtttgagaggttcactgagaaag 7824 Query: 350 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 409 |||| ||||| |||||||| || ||||| || || || || |||| ||||||||||||| Sbjct: 7823 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 7764 Query: 410 gaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgc 469 | ||||||||| |||| ||||||||| |||||||||| ||||||||||| || ||||||| Sbjct: 7763 gtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgc 7704 Query: 470 ttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattggga 529 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 7703 tcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattggga 7644 Query: 530 ggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttag 589 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 7643 ggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttgg 7584 Query: 590 agctttcattggaggaagctcg 611 ||||||||||||| |||||||| Sbjct: 7583 agctttcattggaagaagctcg 7562
>dbj|AK066153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058A21, full insert sequence Length = 3088 Score = 460 bits (232), Expect = e-126 Identities = 481/562 (85%), Gaps = 4/562 (0%) Strand = Plus / Plus Query: 50 tacttttgaccatggcagggaccttagtcctgccggttgctcttgagacaacttttgcag 109 ||||| ||||||||||||| ||| | ||| ||||||||| || | ||||||||||||| Sbjct: 120 tacttctgaccatggcaggcaccctgctccagccggttgccctcggaacaacttttgcag 179 Query: 110 gccgtacaggcggtcgacactggaagtctcatggaaccaggaggactccctcaatgttgg 169 ||||| | | |||| | |||||||||||||| || |||||| ||||||||||||||| Sbjct: 180 gccgtgtaagtggtcagcgatggaagtctcatggcacaaggaggcctccctcaatgttgg 239 Query: 170 caatgtcattaaaccgtcctgtaaggatggcagcatttgtcggtctgagatcggtacata 229 | ||||| || | ||| || || | |||||| ||||||||||||||||||||||| |||| Sbjct: 240 cgatgtccttgagccgcccagttaagatggccgcatttgtcggtctgagatcggtgcata 299 Query: 230 gcttctcagctatgcgctcgtccaacttcaggtcaacagttgcatcttacagattctcta 289 ||||||||| | || |||||||||| || || |||||||||||||||| | | Sbjct: 300 gcttctcagtcacgcctgtcaccaacttcagatcgacggttgcatcttacagat---caa 356 Query: 290 gacggggaaggcgtgcttcttttgtaaccagagcgatgttcgagagatttactgagaaag 349 ||||||||||||||||| | ||||||||||| ||||||| ||||| || |||||||||| Sbjct: 357 gacggggaaggcgtgct-cgcttgtaaccagatcgatgtttgagaggttcactgagaaag 415 Query: 350 ctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcg 409 |||| ||||| |||||||| || ||||| || || || || |||| ||||||||||||| Sbjct: 416 ctattaaggttataatgcttgcgcaagaagaggcaaggcggttgggccacaactttgtcg 475 Query: 410 gaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgc 469 | ||||||||| |||| ||||||||| |||||||||| ||||||||||| || ||||||| Sbjct: 476 gtactgagcaaattctcttgggtctgattggagaagggactggtattgctgctaaggtgc 535 Query: 470 ttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattggga 529 | ||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 536 tcaagtcaatgggcataaatctcaaggatgcacgtgtggaagtggagaagatcattggga 595 Query: 530 ggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttag 589 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 596 ggggcaatggtttcgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttgg 655 Query: 590 agctttcattggaggaagctcg 611 ||||||||||||| |||||||| Sbjct: 656 agctttcattggaagaagctcg 677
>gb|L09547.1|PEAPCLP Pisum sativum (clone pCLp) nuclear encoded precursor to chloroplast protein mRNA, complete cds Length = 3239 Score = 153 bits (77), Expect = 8e-34 Identities = 221/269 (82%) Strand = Plus / Plus Query: 343 gagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaac 402 |||||||| || || || |||||||| || || |||||||| ||||| || |||||||| Sbjct: 340 gagaaagcaatcaaagtgataatgctagctcaggaggaagcaagacgtcttggtcacaat 399 Query: 403 tttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcg 462 ||||||||||||||||| |||| |||||||| |||| |||||||||||||| || || Sbjct: 400 tttgtcggaactgagcagattcttttgggtcttattggtgaaggcactggtatcgccgcc 459 Query: 463 aaggtgcttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatc 522 ||||| | ||||| ||||| || || || || ||||| ||||| |||||||||||||| Sbjct: 460 aaggttttaaagtctatgggaatcaaccttaaagatgcacgtgttgaagtggagaagata 519 Query: 523 attgggaggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgt 582 ||||| ||||| | || |||||||||||||| || ||||| || || |||||||| ||| Sbjct: 520 attggaaggggtagtggatttgttgctgtcgagattccatttactccccgtgcaaagcgt 579 Query: 583 gttttagagctttcattggaggaagctcg 611 || || || |||||| |||||||||||| Sbjct: 580 gtattggaactttcacaggaggaagctcg 608
>ref|XM_472335.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2667 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Plus Query: 355 aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 414 ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || Sbjct: 199 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 258 Query: 415 gagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgcttaag 474 |||||| ||||| |||| || | || || ||||| || || ||||| ||||| || ||| Sbjct: 259 gagcaaattctactgggccttatcggtgagggcacaggaatcgcggcaaaggttctcaag 318 Query: 475 tccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattgggaggggc 534 || |||||||| || || |||||||||||||||||||| |||||||||||||| | || Sbjct: 319 tctatgggtatcaaccttaaggatgcccgtgtggaagttgagaagatcattggacgtggt 378 Query: 535 aacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgt 584 | ||| ||||| ||||| || || |||||||| || |||||||| ||||| Sbjct: 379 agcgggtttgtggctgttgagatcccattcacgcctcgtgcaaagcgtgt 428
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Minus Query: 355 aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 414 ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || Sbjct: 19615390 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 19615331 Query: 415 gagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgcttaag 474 |||||| ||||| |||| || | || || ||||| || || ||||| ||||| || ||| Sbjct: 19615330 gagcaaattctactgggccttatcggtgagggcacaggaatcgcggcaaaggttctcaag 19615271 Query: 475 tccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattgggaggggc 534 || |||||||| || || |||||||||||||||||||| |||||||||||||| | || Sbjct: 19615270 tctatgggtatcaaccttaaggatgcccgtgtggaagttgagaagatcattggacgtggt 19615211 Query: 535 aacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgt 584 | ||| ||||| ||||| || || |||||||| || |||||||| ||||| Sbjct: 19615210 agcgggtttgtggctgttgagatcccattcacgcctcgtgcaaagcgtgt 19615161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gctcttctttctccctctctc 21 ||||||||||||||||||||| Sbjct: 33138118 gctcttctttctccctctctc 33138098
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 123 bits (62), Expect = 7e-25 Identities = 188/230 (81%) Strand = Plus / Minus Query: 355 aaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaact 414 ||||| || ||||| ||||| || |||||||| |||||||| ||||||||||| || || Sbjct: 66116 aaggtgatcatgcttgcacaggaagaagcgaggcgcctgggccacaactttgttgggacg 66057 Query: 415 gagcaagttctattgggtctggttggagaaggcactggtattgcggcgaaggtgcttaag 474 |||||| ||||| |||| || | || || ||||| || || ||||| ||||| || ||| Sbjct: 66056 gagcaaattctactgggccttatcggtgagggcacaggaatcgcggcaaaggttctcaag 65997 Query: 475 tccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatcattgggaggggc 534 || |||||||| || || |||||||||||||||||||| |||||||||||||| | || Sbjct: 65996 tctatgggtatcaaccttaaggatgcccgtgtggaagttgagaagatcattggacgtggt 65937 Query: 535 aacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgt 584 | ||| ||||| ||||| || || |||||||| || |||||||| ||||| Sbjct: 65936 agcgggtttgtggctgttgagatcccattcacgcctcgtgcaaagcgtgt 65887
>gb|AF043539.1|AF043539 Spinacia oleracea ClpC protease (clpC) mRNA, chloroplast gene encoding chloroplast protein, complete cds Length = 2992 Score = 121 bits (61), Expect = 3e-24 Identities = 151/181 (83%) Strand = Plus / Plus Query: 428 tgggtctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataa 487 ||||||| |||| ||||||||||| ||||| || ||||| | || |||||||| || | Sbjct: 520 tgggtcttattggtgaaggcactggaattgctgccaaggtcttgaaatccatgggaatta 579 Query: 488 atctgaaggatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttg 547 ||||||| ||||| ||||| ||||| ||||| || ||||||||||||| ||| ||||||| Sbjct: 580 atctgaaagatgctcgtgtagaagttgagaaaattattgggaggggcagcggatttgttg 639 Query: 548 ctgtcgaaataccattcacaccacgtgcaaaacgtgttttagagctttcattggaggaag 607 |||| ||||| ||||| || || ||||| || |||||||| || |||||||| ||||||| Sbjct: 640 ctgttgaaattccatttactcctcgtgccaagcgtgttttggaactttcattagaggaag 699 Query: 608 c 608 | Sbjct: 700 c 700
>gb|M32603.1|TOMCD4A Tomato ATP-dependent protease (CD4A) gene, complete cds Length = 5429 Score = 113 bits (57), Expect = 7e-22 Identities = 216/269 (80%) Strand = Plus / Plus Query: 340 actgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcac 399 ||||||||||| ||||| ||||| ||||| || ||||| || || ||||| || |||||| Sbjct: 1078 actgagaaagcaataaaagtcattatgcttgcccaagaagaggccagacgactaggtcac 1137 Query: 400 aactttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtattgcg 459 |||||||| || || || || | || ||||||| |||| || || ||||||||||| Sbjct: 1138 aactttgttgggacagaacagatcctgctgggtcttattggtgagggaactggtattgct 1197 Query: 460 gcgaaggtgcttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaag 519 || ||||| ||||| |||||||| || ||| |||| ||||| ||||||||||| |||||| Sbjct: 1198 gctaaggttcttaaatccatgggaattaatttgaaagatgctcgtgtggaagtagagaag 1257 Query: 520 atcattgggaggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaa 579 |||||||| ||||| | || ||| |||| || ||||| || || || || |||||||| Sbjct: 1258 atcattggcaggggtagtggatttattgcagtggaaatcccttttactcctcgtgcaaag 1317 Query: 580 cgtgttttagagctttcattggaggaagc 608 |||||| |||| || || |||||||||| Sbjct: 1318 cgtgttctagaactatctctggaggaagc 1346
>gb|AC126794.15| Medicago truncatula clone mth2-24j7, complete sequence Length = 129513 Score = 109 bits (55), Expect = 1e-20 Identities = 220/275 (80%) Strand = Plus / Minus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| ||||||||||| || || || ||| | || || |||||||| || || ||||| Sbjct: 40053 tttacggagaaagctatcaaagttattatgttggctcaggaggaagcaaggcggctggga 39994 Query: 397 cacaactttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtatt 456 ||||| ||||| |||||||| || ||||||||||||| |||| ||||| ||||||||| Sbjct: 39993 cacaattttgttggaactgaacagattctattgggtcttattggtgaaggaactggtatt 39934 Query: 457 gcggcgaaggtgcttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggag 516 ||||| ||||| | ||||| ||||| || || || || ||||| ||||| || || ||| Sbjct: 39933 gcggctaaggttttgaagtctatggggattaacctaaaagatgcacgtgtcgaggtagag 39874 Query: 517 aagatcattgggaggggcaacggttttgttgctgtcgaaataccattcacaccacgtgca 576 ||||| ||||| ||||||| |||||||| ||||| || || || || || || ||||| Sbjct: 39873 aagataattggaaggggcagtggttttgtcgctgttgagattccgtttactccgcgtgcc 39814 Query: 577 aaacgtgttttagagctttcattggaggaagctcg 611 || | ||||| || || ||||||||||||||||| Sbjct: 39813 aagagagttttggaactctcattggaggaagctcg 39779
>gb|M32604.1|TOMCD4B Tomato ATP-dependent protease (CD4B) gene, complete cds Length = 5846 Score = 97.6 bits (49), Expect = 4e-17 Identities = 169/209 (80%) Strand = Plus / Plus Query: 343 gagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaac 402 ||||| || ||||| ||||| ||||| |||||||| || || ||||| || |||||||| Sbjct: 1399 gagaaggcgataaaagtcattatgcttgcacaagaagaggccagacgacttggtcacaat 1458 Query: 403 tttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcg 462 ||||| || |||||||| | | |||||||| |||| || || ||||||||||| || Sbjct: 1459 tttgttggcactgagcagatcttgttgggtctaattggtgagggaactggtattgctgcc 1518 Query: 463 aaggtgcttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatc 522 ||||| ||||| || ||||| || ||| |||| ||||| |||||||||||||| ||||| Sbjct: 1519 aaggttcttaaatcgatggggatcaatttgaaagatgctcgtgtggaagtggaaaagata 1578 Query: 523 attgggaggggcaacggttttgttgctgt 551 ||||| ||||| | || ||||||||||| Sbjct: 1579 attggaaggggtagtgggtttgttgctgt 1607
>ref|NM_114746.2| Arabidopsis thaliana ATCLPC; ATP binding / ATPase/ DNA binding / nuclease/ nucleoside-triphosphatase/ nucleotide binding / protein binding AT3G48870 (ATCLPC) mRNA, complete cds Length = 3130 Score = 95.6 bits (48), Expect = 2e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 312 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 371 |||| ||| ||| ||||| ||| | ||||| |||||||| || |||||||||||||| | Sbjct: 433 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 492 Query: 372 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 431 ||||||||||| | | || || || |||||||| || ||||||||| | || ||||| Sbjct: 493 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 552 Query: 432 tctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatct 491 ||| |||||||||| ||||| ||||| || ||||| ||||| |||||||| || ||||| Sbjct: 553 tctaattggagaagggactgggattgccgccaaggttcttaaatccatggggatcaatct 612 Query: 492 gaaggatgcccgtgtggaagtggagaagatcattgggaggggca 535 || ||| | || |||||||| || ||||| |||||||| |||| Sbjct: 613 taaagattcacgcgtggaagtagaaaagataattgggagaggca 656
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 95.6 bits (48), Expect = 2e-16 Identities = 180/224 (80%) Strand = Plus / Minus Query: 312 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 371 |||| ||| ||| ||||| ||| | ||||| |||||||| || |||||||||||||| | Sbjct: 74121 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 74062 Query: 372 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 431 ||||||||||| | | || || || |||||||| || ||||||||| | || ||||| Sbjct: 74061 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 74002 Query: 432 tctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatct 491 ||| |||||||||| ||||| ||||| || ||||| ||||| |||||||| || ||||| Sbjct: 74001 tctaattggagaagggactgggattgccgccaaggttcttaaatccatggggatcaatct 73942 Query: 492 gaaggatgcccgtgtggaagtggagaagatcattgggaggggca 535 || ||| | || |||||||| || ||||| |||||||| |||| Sbjct: 73941 taaagattcacgcgtggaagtagaaaagataattgggagaggca 73898
>gb|AY056787.1| Arabidopsis thaliana AT3g48870/T21J18_140 mRNA, complete cds Length = 3105 Score = 95.6 bits (48), Expect = 2e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 312 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 371 |||| ||| ||| ||||| ||| | ||||| |||||||| || |||||||||||||| | Sbjct: 433 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 492 Query: 372 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 431 ||||||||||| | | || || || |||||||| || ||||||||| | || ||||| Sbjct: 493 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 552 Query: 432 tctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatct 491 ||| |||||||||| ||||| ||||| || ||||| ||||| |||||||| || ||||| Sbjct: 553 tctaattggagaagggactgggattgccgccaaggttcttaaatccatggggatcaatct 612 Query: 492 gaaggatgcccgtgtggaagtggagaagatcattgggaggggca 535 || ||| | || |||||||| || ||||| |||||||| |||| Sbjct: 613 taaagattcacgcgtggaagtagaaaagataattgggagaggca 656
>dbj|AB022324.1| Arabidopsis thaliana mRNA for AtClpC, complete cds Length = 3090 Score = 95.6 bits (48), Expect = 2e-16 Identities = 180/224 (80%) Strand = Plus / Plus Query: 312 tgtaaccagagcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgc 371 |||| ||| ||| ||||| ||| | ||||| |||||||| || |||||||||||||| | Sbjct: 418 tgtacccaaagcaatgtttgagcgttttaccgagaaagcaattaaggtcataatgctgtc 477 Query: 372 acaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagttctattggg 431 ||||||||||| | | || || || |||||||| || ||||||||| | || ||||| Sbjct: 478 tcaagaggaagctcggagacttggccataactttgttgggactgagcaaatactgttggg 537 Query: 432 tctggttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatct 491 ||| |||||||||| ||||| ||||| || ||||| ||||| |||||||| || ||||| Sbjct: 538 tctaattggagaagggactgggattgccgccaaggttcttaaatccatggggatcaatct 597 Query: 492 gaaggatgcccgtgtggaagtggagaagatcattgggaggggca 535 || ||| | || |||||||| || ||||| |||||||| |||| Sbjct: 598 taaagattcacgcgtggaagtagaaaagataattgggagaggca 641
>emb|X75328.1|BNCLPA B.napus (Topas) clpA mRNA Length = 2837 Score = 93.7 bits (47), Expect = 6e-16 Identities = 182/227 (80%) Strand = Plus / Plus Query: 325 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 384 ||||| ||||| ||||||||||||||||| ||||| || ||||| || || |||||||| Sbjct: 123 atgtttgagaggtttactgagaaagctatcaaggttattatgcttgctcaggaggaagct 182 Query: 385 agacgcctgggtcacaactttgtcggaactgagcaagttctattgggtctggttggagaa 444 || | || || ||||| ||||| ||||| || || |||| ||||||| |||| || Sbjct: 183 aggagactaggccacaattttgtgggaaccgaacagattcttctgggtcttattggtgag 242 Query: 445 ggcactggtattgcggcgaaggtgcttaagtccatgggtataaatctgaaggatgcccgt 504 || ||||| ||||| || ||||| | ||||||||||| || || || |||||||| ||| Sbjct: 243 ggtactggaattgctgctaaggttttgaagtccatggggattaacctaaaggatgcacgt 302 Query: 505 gtggaagtggagaagatcattgggaggggcaacggttttgttgctgt 551 ||||| || |||||||| ||||| ||||||| || ||||||||||| Sbjct: 303 gtggaggttgagaagattattggaaggggcagtgggtttgttgctgt 349
>dbj|AP006098.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G08, TM0175, complete sequence Length = 108582 Score = 89.7 bits (45), Expect = 1e-14 Identities = 213/269 (79%) Strand = Plus / Minus Query: 343 gagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaac 402 |||||||| || ||||| || ||||| | || ||||| |||||||| |||||||| || Sbjct: 68572 gagaaagcaatcaaggttattatgctttcccaggaggaggcgagacggctgggtcataat 68513 Query: 403 tttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtattgcggcg 462 ||||| ||||| || || | || |||||||| ||||| ||||||||||||||||| || Sbjct: 68512 tttgttggaacagaacagatcctgttgggtcttgttggtgaaggcactggtattgctgct 68453 Query: 463 aaggtgcttaagtccatgggtataaatctgaaggatgcccgtgtggaagtggagaagatc 522 | ||| | ||| | ||||| || | || || ||||| || ||||||||||| |||| | Sbjct: 68452 agggttttgaaggctatggggattagccttaaagatgcacgcgtggaagtggaaaagacc 68393 Query: 523 attgggaggggcaacggttttgttgctgtcgaaataccattcacaccacgtgcaaaacgt 582 ||||| ||||| | || ||||||||||| || || ||||| || || |||||||| ||| Sbjct: 68392 attggaaggggtagtggatttgttgctgttgagattccatttactcctcgtgcaaagcgt 68333 Query: 583 gttttagagctttcattggaggaagctcg 611 ||||| || || ||| ||||||| ||||| Sbjct: 68332 gttttggaactctcactggaggaggctcg 68304
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 |||||||| ||||||||||| ||||||||||| ||||| || ||||| |||||| | || Sbjct: 122308 tttactgaaaaagctataaaagtcataatgctagcacaggaagaagctagacgcttagga 122367 Query: 397 cacaactttgtcggaactgagca 419 || || ||||||||||||||||| Sbjct: 122368 cataattttgtcggaactgagca 122390
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 |||||||| ||||||||||| ||||| ||||| |||||||| ||||| |||||| | || Sbjct: 120962 tttactgaaaaagctataaaagtcatcatgctagcacaagaagaagctagacgcttaggc 121021 Query: 397 cacaactttgtcggaactgagcaa 420 || |||||||| || ||||||||| Sbjct: 121022 cataactttgttggtactgagcaa 121045
>ref|NM_114414.1| Arabidopsis thaliana ATP binding / protein binding AT3G45450 mRNA, complete cds Length = 1026 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 437 ttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatctgaagg 496 |||| ||||| ||||| || || || ||||| ||||| |||||||| || ||||| || | Sbjct: 113 ttggggaagggactgggatcgctgcaaaggttcttaaatccatggggatcaatcttaaag 172 Query: 497 atgcccgtgtggaagtggagaagatcattgggaggggca 535 |||| |||||||||||||| ||||| |||||||| |||| Sbjct: 173 atgcacgtgtggaagtggaaaagataattgggagaggca 211 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagc 383 |||||||||||||| || |||||||||| | | || ||||||||||| Sbjct: 13 tttactgagaaagcaattaaggtcataacgttggctcaagaggaagc 59
>emb|AL138657.1|ATF9K21 Arabidopsis thaliana DNA chromosome 3, BAC clone F9K21 Length = 110980 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 437 ttggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatctgaagg 496 |||| ||||| ||||| || || || ||||| ||||| |||||||| || ||||| || | Sbjct: 15747 ttggggaagggactgggatcgctgcaaaggttcttaaatccatggggatcaatcttaaag 15806 Query: 497 atgcccgtgtggaagtggagaagatcattgggaggggca 535 |||| |||||||||||||| ||||| |||||||| |||| Sbjct: 15807 atgcacgtgtggaagtggaaaagataattgggagaggca 15845 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 323 cgatgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaag 382 ||||||| ||| | |||||||||||||| || |||||||||| | | || |||||||||| Sbjct: 15633 cgatgtttgagcgttttactgagaaagcaattaaggtcataacgttggctcaagaggaag 15692 Query: 383 c 383 | Sbjct: 15693 c 15693
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||| || |||||||| ||||| || || ||||||||| | ||||||||| Sbjct: 1362460 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 1362519 Query: 397 cacaactttgtcggaactgagcaa 420 || ||||| ||||| || |||||| Sbjct: 1362520 cataacttcgtcggcaccgagcaa 1362543
>gb|U16134.1|SSU16134 Synechococcus sp. Clp protease putative regulatory subunit (clpC) gene, complete cds Length = 2935 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||| || |||||||| ||||| || || ||||||||| | ||||||||| Sbjct: 356 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 415 Query: 397 cacaactttgtcggaactgagcaa 420 || ||||| ||||| || |||||| Sbjct: 416 cataacttcgtcggcaccgagcaa 439
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 63.9 bits (32), Expect = 6e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||| || |||||||| ||||| || || ||||||||| | ||||||||| Sbjct: 258423 tttaccgagaaagccattaaggtcatcatgctggctcaggaggaagcgcgtcgcctgggt 258364 Query: 397 cacaactttgtcggaactgagcaa 420 || ||||| ||||| || |||||| Sbjct: 258363 cataacttcgtcggcaccgagcaa 258340
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 321 agcgatgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagagga 380 |||||||||||| | ||||| ||||| || || || || || ||||| || |||||||| Sbjct: 1355512 agcgatgttcgaacggtttaccgagaaggccatcaaagtgatcatgctggcccaagagga 1355453 Query: 381 agcgagacgcctgggtcacaactttgtcggaactgagcaa 420 ||| || | || ||||||||||| ||||||||||||||| Sbjct: 1355452 agctcgaaggcttggtcacaacttcgtcggaactgagcaa 1355413
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||||||||| || || |||||||| ||||| ||||| | || | || Sbjct: 741 tttacagagaaagctataaaagttattatgctcgctcaagaagaagctcgtcgtttaggg 800 Query: 397 cacaactttgtcggaactgagcaagttctattgggtctggttggagaaggcactggtatt 456 ||||| ||||| || ||||| ||| | ||| | |||||| | |||||||| ||||||||| Sbjct: 801 cacaattttgtgggtactgaacaaatactactaggtctgatcggagaaggtactggtatt 860 Query: 457 gcggcgaa 464 || ||||| Sbjct: 861 gctgcgaa 868
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 358 gtcataatgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaactgag 417 ||||| |||||||| || |||||||| | |||||||| ||||| || || ||||||||| Sbjct: 2344441 gtcattatgctcgctcaggaggaagcacgtcgcctgggacacaatttcgtaggaactgag 2344500 Query: 418 caagttctattgggtctggttggagaaggcactgg 452 ||| |||| ||||| || | |||||||| ||||| Sbjct: 2344501 caaattctcctgggtttgatgggagaaggaactgg 2344535 Score = 44.1 bits (22), Expect = 0.53 Identities = 88/110 (80%) Strand = Plus / Plus Query: 394 ggtcacaactttgtcggaactgagcaagttctattgggtctggttggagaaggcactggt 453 ||||||||||| |||||||| || || | || ||||||||| | || ||||| || || Sbjct: 3642461 ggtcacaacttcgtcggaaccgaacagatcctcttgggtctgatcggggaaggtacggga 3642520 Query: 454 attgcggcgaaggtgcttaagtccatgggtataaatctgaaggatgcccg 503 ||||||| |||||||| || || |||||| | ||||| || |||||||| Sbjct: 3642521 gttgcggccaaggtgctgaaatcgatgggtgtcaatctcaaagatgcccg 3642570
>ref|NM_124471.2| Arabidopsis thaliana CLPC; ATP binding / ATPase AT5G50920 (CLPC) mRNA, complete cds Length = 3183 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| |||||||| || |||||||| ||||| ||||| | || ||||||||||| || Sbjct: 606 gatgcacgtgtggaggttgagaagattattggaaggggaagtggctttgttgctgttgag 665 Query: 556 ataccattcacaccacgtgcaaaacgtgtt 585 || |||||||| || ||||| || |||||| Sbjct: 666 atcccattcactcctcgtgccaagcgtgtt 695
>gb|AY102125.1| Arabidopsis thaliana AT5g50920/K3K7_7 mRNA, complete cds Length = 3125 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| |||||||| || |||||||| ||||| ||||| | || ||||||||||| || Sbjct: 581 gatgcacgtgtggaggttgagaagattattggaaggggaagtggctttgttgctgttgag 640 Query: 556 ataccattcacaccacgtgcaaaacgtgtt 585 || |||||||| || ||||| || |||||| Sbjct: 641 atcccattcactcctcgtgccaagcgtgtt 670
>emb|BX833282.1|CNS09YXM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL42ZE05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| |||||||| || |||||||| ||||| ||||| | || ||||||||||| || Sbjct: 557 gatgcacgtgtggaggttgagaagattattggaaggggaagtggctttgttgctgttgag 616 Query: 556 ataccattcacaccacgtgcaaaacgtgtt 585 || |||||||| || ||||| || |||||| Sbjct: 617 atcccattcactcctcgtgccaagcgtgtt 646
>dbj|AB017063.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K3K7 Length = 68726 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| |||||||| || |||||||| ||||| ||||| | || ||||||||||| || Sbjct: 21839 gatgcacgtgtggaggttgagaagattattggaaggggaagtggctttgttgctgttgag 21780 Query: 556 ataccattcacaccacgtgcaaaacgtgtt 585 || |||||||| || ||||| || |||||| Sbjct: 21779 atcccattcactcctcgtgccaagcgtgtt 21750
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 364 atgctcgcacaagaggaagcgagacgcctgggtcacaactttgtcggaactgagcaagtt 423 |||||||| || |||||||| | |||||||| ||||| || || |||||||||||| || Sbjct: 5457309 atgctcgctcaggaggaagcacgtcgcctgggacacaatttcgtaggaactgagcaaatt 5457250 Query: 424 ctattgggtctggttggagaaggcactgg 452 || ||||| || | |||||||| ||||| Sbjct: 5457249 ctcctgggtttgatgggagaaggaactgg 5457221
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 48.1 bits (24), Expect = 0.034 Identities = 69/84 (82%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||| || ||||| || ||||| || ||||||||||| || | ||||| Sbjct: 33478 tttacagagaaagcaatcaaggttatcatgcttgcccaagaggaagctcgaagattgggt 33537 Query: 397 cacaactttgtcggaactgagcaa 420 ||||| ||||| || ||||||||| Sbjct: 33538 cacaattttgttggtactgagcaa 33561 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| ||||| ||||| || ||||| |||||| |||| ||| |||||||| || ||| Sbjct: 33637 gatgcacgtgttgaagttgaaaagattattgggcggggttccggatttgttgcggtggaa 33696 Query: 556 ataccatt 563 |||||||| Sbjct: 33697 ataccatt 33704
>gb|AY704571.1| Emiliania huxleyi Clp protease ATP binding subunit (clpC) gene, complete cds; chloroplast Length = 2454 Score = 48.1 bits (24), Expect = 0.034 Identities = 69/84 (82%) Strand = Plus / Plus Query: 337 tttactgagaaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggt 396 ||||| |||||||| || ||||| || ||||| || ||||||||||| || | ||||| Sbjct: 13 tttacagagaaagcaatcaaggttatcatgcttgcccaagaggaagctcgaagattgggt 72 Query: 397 cacaactttgtcggaactgagcaa 420 ||||| ||||| || ||||||||| Sbjct: 73 cacaattttgttggtactgagcaa 96 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| ||||| ||||| || ||||| |||||| |||| ||| |||||||| || ||| Sbjct: 172 gatgcacgtgttgaagttgaaaagattattgggcggggttccggatttgttgcggtggaa 231 Query: 556 ataccatt 563 |||||||| Sbjct: 232 ataccatt 239
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 349 gctataaaggtcataatgctcgcacaagaggaagcgaga 387 |||||||| ||||| ||||| || ||||||||||||||| Sbjct: 1013800 gctataaaagtcattatgcttgcccaagaggaagcgaga 1013762
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 541 tttgttgctgtcgaaataccattcacaccacgtgcaaaacgtgttttagagctttcattg 600 ||||||||||| |||||||| || ||||| ||||| ||| | || |||||||||| || Sbjct: 1032974 tttgttgctgtagaaataccttttacacctcgtgcgaaaagagtcctagagctttcttta 1033033 Query: 601 gaggaagctcg 611 || |||||||| Sbjct: 1033034 gaagaagctcg 1033044
>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome Length = 183883 Score = 44.1 bits (22), Expect = 0.53 Identities = 52/62 (83%) Strand = Plus / Plus Query: 346 aaagctataaaggtcataatgctcgcacaagaggaagcgagacgcctgggtcacaacttt 405 ||||| ||||| || || ||||| || ||||| ||||| |||||| | |||||||||||| Sbjct: 55295 aaagcaataaaagttatcatgcttgctcaagaagaagctagacgcttaggtcacaacttt 55354 Query: 406 gt 407 || Sbjct: 55355 gt 55356
>ref|NM_032047.4| Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 (B3GNT5), mRNA Length = 4131 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 283 ctgaaggatgcccgtgtggaag 304
>gb|BC028058.1| Homo sapiens UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, mRNA (cDNA clone MGC:39847 IMAGE:5175670), complete cds Length = 1849 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 276 ctgaaggatgcccgtgtggaag 297
>gb|AC069417.19| Homo sapiens 3 BAC RP11-385K11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 107000 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 30942 ctgaaggatgcccgtgtggaag 30921
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 553 gaaataccattcacaccacgtgcaaaacgtgttttaga 590 ||||||||||| || || ||||||||||||||| |||| Sbjct: 13323 gaaataccatttactcctcgtgcaaaacgtgttctaga 13286
>emb|BX569691.1| Synechococcus sp. WH8102 complete genome; segment 3/7 Length = 347365 Score = 44.1 bits (22), Expect = 0.53 Identities = 70/86 (81%) Strand = Plus / Plus Query: 439 ggagaaggcactggtattgcggcgaaggtgcttaagtccatgggtataaatctgaaggat 498 ||||| ||||| ||| | || |||||||| || ||||| |||||| | || || ||||| Sbjct: 199994 ggagagggcacgggtgtcgccgcgaaggttctgaagtcgatgggtgtcaacctcaaggac 200053 Query: 499 gcccgtgtggaagtggagaagatcat 524 ||||| || ||||| ||||||||||| Sbjct: 200054 gcccgggttgaagttgagaagatcat 200079
>dbj|AK091474.1| Homo sapiens cDNA FLJ34155 fis, clone FCBBF3013205, weakly similar to Homo sapiens mRNA for UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta- galactosyltransferase Length = 3345 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 470 ctgaaggatgcccgtgtggaag 491
>gb|AF022909.1| Arabidopsis thaliana ClpC mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2912 Score = 44.1 bits (22), Expect = 0.53 Identities = 73/90 (81%) Strand = Plus / Plus Query: 496 gatgcccgtgtggaagtggagaagatcattgggaggggcaacggttttgttgctgtcgaa 555 ||||| |||||||| || || || || ||||| ||||| | || ||||||||||| ||| Sbjct: 554 gatgcacgtgtggaggttgaaaaaattattggaaggggaagtggctttgttgctgttgaa 613 Query: 556 ataccattcacaccacgtgcaaaacgtgtt 585 || |||||||| || ||||| || |||||| Sbjct: 614 atcccattcactcctcgtgccaagcgtgtt 643 Score = 42.1 bits (21), Expect = 2.1 Identities = 72/89 (80%) Strand = Plus / Plus Query: 325 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 384 ||||| || |||||||| ||||||||||| || || || ||||| || || |||||||| Sbjct: 383 atgtttgaaagatttacggagaaagctatcaaagttattatgcttgctcaggaggaagct 442 Query: 385 agacgcctgggtcacaactttgtcggaac 413 ||| | || || ||||| ||||| ||||| Sbjct: 443 agaagactaggccacaattttgtgggaac 471
>gb|AF368169.1|AF368169 Homo sapiens beta 1,3 N-acetyglucosaminyltransferase Lc3 synthase mRNA, complete cds Length = 1694 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 213 ctgaaggatgcccgtgtggaag 234
>dbj|AK074424.1| Homo sapiens cDNA FLJ23844 fis, clone KAT07578, highly similar to Homo sapiens beta3GnT5 mRNA for beta1,3-N-acetylglucosaminyltransferase 5 Length = 1838 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 270 ctgaaggatgcccgtgtggaag 291
>dbj|AB209517.1| Homo sapiens mRNA for beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant protein Length = 3936 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 490 ctgaaggatgcccgtgtggaag 511 |||||||||||||||||||||| Sbjct: 101 ctgaaggatgcccgtgtggaag 122
>gb|AC186003.3| Pan troglodytes BAC clone CH251-72E16 from chromosome 5, complete sequence Length = 191785 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 122018 ttctttctccctctctctgtctctc 121994
>gb|AC132576.3| Mus musculus BAC clone RP24-444F2 from chromosome 16, complete sequence Length = 135862 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctcggtctctca 30 ||||||| ||||||||||||| ||||||| Sbjct: 85726 ctcttctctctccctctctcgctctctca 85698
>gb|AC139334.3| Mus musculus BAC clone RP23-449C21 from chromosome 18, complete sequence Length = 194665 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctctc 29 |||||||||||||||||| |||||| Sbjct: 127093 ttctttctccctctctcgctctctc 127069
>emb|AL954256.1| Pan troglodytes chromosome 22 clone PTB-129I16 map 22q22.3, complete sequence Length = 180777 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 51090 ttctttctccctctctctgtctctc 51066
>emb|AL954255.1| Pan troglodytes chromosome 22 clone PTB-044C19 map 22q22.3, complete sequence Length = 177268 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 149269 ttctttctccctctctctgtctctc 149245
>gb|AC099561.2| Homo sapiens chromosome 1 clone RP11-193H16, complete sequence Length = 163453 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 25565 ttctttctccctctctctgtctctc 25589
>gb|AC182475.2| Pan troglodytes BAC clone CH251-196J4 from chromosome 5, complete sequence Length = 147307 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 46075 ttctttctccctctctctgtctctc 46051
>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02, complete sequence Length = 165745 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gctcttctttctccctctctc 21 ||||||||||||||||||||| Sbjct: 20768 gctcttctttctccctctctc 20748
>emb|AL732368.12| Mouse DNA sequence from clone RP23-417N12 on chromosome X, complete sequence Length = 177727 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 ttctttctccctctctcggtctctc 29 ||||||||||||||||| ||||||| Sbjct: 130864 ttctttctccctctctctgtctctc 130888
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 493 aaggatgcccgtgtggaagtggagaagatcat 524 ||||||||||| || ||||| ||||||||||| Sbjct: 1498438 aaggatgcccgggttgaagttgagaagatcat 1498407
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence Length = 196946 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 92791 tctttctccctctctctgtctctc 92814
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctcggtctctc 29 ||||||| |||||||||||| ||||||| Sbjct: 161886 ctcttctctctccctctctcagtctctc 161913
>gb|AC124332.9| Mus musculus chromosome 1, clone RP24-497F17, complete sequence Length = 181313 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tctccctctctcggtctctc 29 |||||||||||||||||||| Sbjct: 39852 tctccctctctcggtctctc 39871
>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence Length = 212792 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 208731 ctcttctttctccctctctc 208750
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctcggtctctc 29 ||||||| |||||||||||| ||||||| Sbjct: 37080 ctcttctctctccctctctcagtctctc 37107
>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence Length = 175604 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 117953 tctttctccctctctctgtctctc 117976
>gb|AC092140.4| Homo sapiens chromosome 16 clone RP11-413H22, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 22915 ctcttctttctccctctctc 22896
>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence Length = 213751 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 caacttacttttgaccatgg 64 |||||||||||||||||||| Sbjct: 60222 caacttacttttgaccatgg 60203
>gb|AC122030.3| Mus musculus BAC clone RP24-401B24 from chromosome 3, complete sequence Length = 123838 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 44752 ctcttctttctccctctctc 44771
>gb|AC127563.4| Mus musculus BAC clone RP24-283E13 from chromosome 10, complete sequence Length = 150502 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctcggtctctc 29 |||||||||||| ||||||| ||||||| Sbjct: 116170 ctcttctttctctctctctctgtctctc 116197
>gb|AC125038.4| Mus musculus BAC clone RP23-333P7 from chromosome 5, complete sequence Length = 198463 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 165881 ctcttctttctccctctctc 165862
>gb|AC087432.3| Homo sapiens chromosome 3 clone RP11-96G4 map 3p, complete sequence Length = 152430 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 141482 ctcttctttctccctctctc 141463
>gb|AC087427.3| Homo sapiens chromosome 3 clone RP11-176P14 map 3p, complete sequence Length = 171965 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 82128 ctcttctttctccctctctc 82109
>gb|AC115110.3| Homo sapiens BAC clone RP11-192P23 from 4, complete sequence Length = 171128 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 ttctttctccctctctcggtctct 28 |||||||||||||||||| ||||| Sbjct: 108172 ttctttctccctctctcgctctct 108195
>ref|XM_537382.2| PREDICTED: Canis familiaris similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta), transcript variant 1 (LOC480258), mRNA Length = 912 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 300 caggaggactccctcaatgt 319
>ref|XM_855106.1| PREDICTED: Canis familiaris similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta), transcript variant 5 (LOC480258), mRNA Length = 744 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 132 caggaggactccctcaatgt 151
>ref|XM_855030.1| PREDICTED: Canis familiaris similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta), transcript variant 3 (LOC480258), mRNA Length = 738 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 126 caggaggactccctcaatgt 145
>ref|XM_854997.1| PREDICTED: Canis familiaris similar to Proteasome activator complex subunit 2 (Proteasome activator 28-beta subunit) (PA28beta) (PA28b) (Activator of multicatalytic protease subunit 2) (11S regulator complex beta subunit) (REG-beta), transcript variant 2 (LOC480258), mRNA Length = 767 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 189 caggaggactccctcaatgt 208
>gb|AC165347.4| Mus musculus BAC clone RP23-348B21 from chromosome 13, complete sequence Length = 205783 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 84638 ctcttctttctccctctctc 84619
>emb|AL928709.36| Zebrafish DNA sequence from clone CH211-127L5 in linkage group 17, complete sequence Length = 166456 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tctccctctctcggtctctc 29 |||||||||||||||||||| Sbjct: 95954 tctccctctctcggtctctc 95973
>emb|AL390844.12| Human DNA sequence from clone RP11-255N24 on chromosome 9p13.3-21.3 Contains a CMT1A duplicated region transcript 15 (CDRT15) pseudogene, a pseudogene similar to part of solute carrier family 4 (anion exchanger), member 1, adaptor protein (SLC4A1AP), a novel pseudogene and a RNA binding motif protein, X chromosome (RBMX) (HNRPG) pseudogene, complete sequence Length = 163677 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctct 28 ||||||||||||||||| |||||| Sbjct: 100675 ttctttctccctctctctgtctct 100652
>emb|AL121868.11|HSA541I12 Human DNA sequence from clone RP11-541I12 on chromosome Xq22.1-22.3, complete sequence Length = 118269 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 5768 ctcttctttctccctctctc 5787
>emb|AL050325.20|HSJ824F16 Human DNA sequence from clone RP5-824F16 on chromosome 20 Contains the 5' end of the ANGPT4 gene for angiopoietin 4, part of the gene for a novel protein similar to mouse thrombospondin type 1 domain protein R-spondin and a CpG island, complete sequence Length = 139330 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 16686 tctttctccctctctctgtctctc 16663
>ref|XM_791772.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC592239 (LOC592239), mRNA Length = 1329 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 tggagaagatcattgggagg 531 |||||||||||||||||||| Sbjct: 1028 tggagaagatcattgggagg 1047
>emb|AL669822.10| Mouse DNA sequence from clone RP23-47J12 on chromosome 11 Contains the 5' end of the Cobl gene for cordon-bleu and a CpG island, complete sequence Length = 137869 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 114567 ctcttctttctccctctctc 114586
>emb|AL591129.24| Mouse DNA sequence from clone RP23-147P4 on chromosome 11 Contains 4 novel genes, a ribosomal protein L29 (Rpl29) pseudogene, the Gemin4 gene for gem (nuclear organelle) associated protein 4, the Dbil5 gene for diazepam binding inhibitor-like 5 and four CpG islands, complete sequence Length = 213985 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 108743 ctcttctttctccctctctc 108724
>gb|AC026898.8| Homo sapiens chromosome 18, clone RP11-767C4, complete sequence Length = 187295 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 156547 ctcttctttctccctctctc 156566
>gb|BC035974.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15, mRNA (cDNA clone MGC:32617 IMAGE:4806964), complete cds Length = 3018 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctct 28 |||||||||||||||||| ||||| Sbjct: 323 ttctttctccctctctcgctctct 300
>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence Length = 182898 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tctccctctctcggtctctc 29 |||||||||||||||||||| Sbjct: 59095 tctccctctctcggtctctc 59076
>gb|AC161408.4| Mus musculus chromosome 1, clone RP24-329G10, complete sequence Length = 154449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tctccctctctcggtctctc 29 |||||||||||||||||||| Sbjct: 126808 tctccctctctcggtctctc 126827
>gb|AC120349.5| Homo sapiens chromosome 18, clone RP11-380M21, complete sequence Length = 183055 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 179345 ctcttctttctccctctctc 179326
>ref|NM_001358.2| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 15 (DHX15), mRNA Length = 3019 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctct 28 |||||||||||||||||| ||||| Sbjct: 336 ttctttctccctctctcgctctct 313
>emb|CR618033.1| full-length cDNA clone CS0DI020YF01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2079 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 823 caggaggactccctcaatgt 842
>gb|AC110002.2| Homo sapiens chromosome 5 clone RP11-125A13, complete sequence Length = 168708 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 5284 tctttctccctctctctgtctctc 5261
>gb|AC182738.1| Gasterosteus aculeatus clone VMRC26-26C14, complete sequence Length = 168680 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 gaagtggagaagatcattgggagg 531 |||||||||| ||||||||||||| Sbjct: 9837 gaagtggagatgatcattgggagg 9814
>emb|BX908736.10| Zebrafish DNA sequence from clone CH211-229C8 in linkage group 18, complete sequence Length = 159047 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 159 ctcaatgttggcaatgtcattaaa 182 |||||||||||||||||| ||||| Sbjct: 40765 ctcaatgttggcaatgtctttaaa 40742
>gb|AC022161.8| Homo sapiens chromosome 16 clone RP11-273P11, complete sequence Length = 181541 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 133890 ctcttctttctccctctctc 133871
>emb|BX323835.9| Zebrafish DNA sequence from clone DKEYP-22F6 in linkage group 14, complete sequence Length = 172378 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tctttctccctctctcggtctctc 29 |||||||| ||||||||||||||| Sbjct: 41841 tctttctctctctctcggtctctc 41818
>gb|AC158239.2| Mus musculus BAC clone RP23-48A24 from chromosome 10, complete sequence Length = 256496 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctcggtctctc 29 |||||||||||| ||||||| ||||||| Sbjct: 221405 ctcttctttctctctctctctgtctctc 221378
>gb|AC008840.5| Homo sapiens chromosome 5 clone CTD-2154I11, complete sequence Length = 126746 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 108729 tctttctccctctctctgtctctc 108706
>gb|AC018618.5|AC018618 Homo sapiens chromosome 15, clone RP11-162I7, complete sequence Length = 156542 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 583 gttttagagctttcattggaggaa 606 ||||||||| |||||||||||||| Sbjct: 73463 gttttagagatttcattggaggaa 73486
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 gcaacggttttgttgctgtc 552 |||||||||||||||||||| Sbjct: 41341050 gcaacggttttgttgctgtc 41341031
>gb|AC008511.6|AC008511 Homo sapiens chromosome 5 clone CTC-454D3, complete sequence Length = 160770 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 26012 tctttctccctctctctgtctctc 26035
>gb|AC009102.10| Homo sapiens chromosome 16 clone RP11-441F2, complete sequence Length = 183394 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 68106 ctcttctttctccctctctc 68125
>gb|AC007222.5| Homo sapiens chromosome 16 clone RP11-441K8, complete sequence Length = 187191 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 tggagaaggcactggtattg 457 |||||||||||||||||||| Sbjct: 175908 tggagaaggcactggtattg 175927
>gb|AC104131.4| Homo sapiens BAC clone RP11-324H23 from 2, complete sequence Length = 154891 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ctccctctctcggtctctca 30 |||||||||||||||||||| Sbjct: 91377 ctccctctctcggtctctca 91396
>dbj|AP004031.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432C03 Length = 164394 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 gcaacggttttgttgctgtc 552 |||||||||||||||||||| Sbjct: 32543 gcaacggttttgttgctgtc 32524
>gb|AF279891.1| Homo sapiens dead box protein 15 mRNA, complete cds Length = 2441 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctct 28 |||||||||||||||||| ||||| Sbjct: 168 ttctttctccctctctcgctctct 145
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 8.3 Identities = 77/96 (80%) Strand = Plus / Plus Query: 325 atgttcgagagatttactgagaaagctataaaggtcataatgctcgcacaagaggaagcg 384 ||||| || |||||||| |||||||| || || || || ||| | || || |||||||| Sbjct: 2215509 atgtttgaaagatttaccgagaaagcaatcaaagtgatcatgttggcccaggaggaagcc 2215568 Query: 385 agacgcctgggtcacaactttgtcggaactgagcaa 420 | |||||||| ||||||||||| || || |||||| Sbjct: 2215569 cgtcgcctgggacacaactttgtgggtaccgagcaa 2215604
>gb|AC102106.14| Mus musculus chromosome 18, clone RP23-92B24, complete sequence Length = 230823 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 124135 ctcttctttctccctctctc 124116
>emb|BX004832.9| Zebrafish DNA sequence from clone CH211-89M19, complete sequence Length = 190952 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctcggtctctc 29 |||||||||||| ||||||| ||||||| Sbjct: 178987 ctcttctttctctctctctctgtctctc 178960
>emb|BX571779.6| Mouse DNA sequence from clone RP23-415G1 on chromosome X, complete sequence Length = 97756 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 14190 tctttctccctctctctgtctctc 14213
>emb|AL929184.7| Zebrafish DNA sequence from clone CH211-125N20, complete sequence Length = 168257 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ttctccctctctcggtctctcatc 32 ||||||||||||| |||||||||| Sbjct: 93273 ttctccctctctctgtctctcatc 93250
>gb|AC115029.12| Mus musculus chromosome 3, clone RP24-248I17, complete sequence Length = 171133 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 23483 ctcttctttctccctctctc 23464
>gb|AE001439.1| Helicobacter pylori J99, complete genome Length = 1643831 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 434 tggttggagaaggcactggtattg 457 |||||||||||||||||| ||||| Sbjct: 634445 tggttggagaaggcactgatattg 634468
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ttctccctctctcggtctctcatc 32 ||||||||||||| |||||||||| Sbjct: 56819 ttctccctctctctgtctctcatc 56842
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194815 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 caggaggactccctcaatgt 166 |||||||||||||||||||| Sbjct: 64564 caggaggactccctcaatgt 64583
>dbj|AP006241.1| Homo sapiens genomic DNA, chromosome 3, clone:RP11-660I20, complete sequence Length = 171287 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 aaagctataaaggtcataat 365 |||||||||||||||||||| Sbjct: 10908 aaagctataaaggtcataat 10889
>emb|AL935312.10| Mouse DNA sequence from clone RP23-56A7 on chromosome 2, complete sequence Length = 124236 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctcttctttctccctctctc 21 |||||||||||||||||||| Sbjct: 35716 ctcttctttctccctctctc 35735
>gb|AC003691.1|AC003691 Human Chromosome 11q23 PAC clone pDJ254e13, complete sequence Length = 65020 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 33190 tctttctccctctctctgtctctc 33167
>gb|AC132382.3| Mus musculus BAC clone RP23-425E9 from 8, complete sequence Length = 218283 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 tctttctccctctctcggtctctc 29 |||||||||||||||| ||||||| Sbjct: 125697 tctttctccctctctctgtctctc 125720
>dbj|AP000500.1| Homo sapiens genomic DNA, chromosome 3p21.3, clone:603 to 320, anti-oncogene region, section 3/3 Length = 254437 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 aaagctataaaggtcataat 365 |||||||||||||||||||| Sbjct: 219225 aaagctataaaggtcataat 219206
>dbj|AB001636.1| Homo sapiens mRNA for ATP-dependent RNA helicase #46, complete cds Length = 3028 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ttctttctccctctctcggtctct 28 |||||||||||||||||| ||||| Sbjct: 329 ttctttctccctctctcgctctct 306 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,587,754 Number of Sequences: 3902068 Number of extensions: 4587754 Number of successful extensions: 93762 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93252 Number of HSP's gapped (non-prelim): 501 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
