ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63d01 |
|---|---|
| Clone Library Name | barley_pub |
>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 427 Score = 235 bits (599), Expect = 8e-62 Identities = 113/168 (67%), Positives = 135/168 (80%) Frame = +2 Query: 26 MGDHGNAMTRGNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHK 205 MGD G+ R NP+ +Q R K RANV QLKLMGQ HPTGLT NLLKLFE RP LE+K Sbjct: 1 MGDSGDPFLR-NPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYK 59 Query: 206 PPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAK 385 PP +KRK P YTGMAQFVS FAEPGDPEYAPP P E ++K++RI KL+LE+G +K A+ Sbjct: 60 PPPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAE 119 Query: 386 ELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 +L+ Y+P +DPN T DPYKTLFV+RLNYE+SES++KREFE+YGPIKRV Sbjct: 120 DLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 114 bits (284), Expect = 3e-25 Identities = 59/133 (44%), Positives = 86/133 (64%), Gaps = 7/133 (5%) Frame = +2 Query: 152 LTPNLLKLFEARPMLEHKPPVQKRKLP-------AYTGMAQFVSRFAEPGDPEYAPPVPT 310 L PNLL LF R + + PP++K LP Y G+A ++ F +P D APP Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59 Query: 311 CETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRV 490 ET+ E+ +R R+ K+E+ +V EL+ ++P +DPN D +KTLFVAR+NY+T+ES++ Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119 Query: 491 KREFEAYGPIKRV 529 +REFE YGPIKR+ Sbjct: 120 RREFEVYGPIKRI 132
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 114 bits (284), Expect = 3e-25 Identities = 59/133 (44%), Positives = 86/133 (64%), Gaps = 7/133 (5%) Frame = +2 Query: 152 LTPNLLKLFEARPMLEHKPPVQKRKLP-------AYTGMAQFVSRFAEPGDPEYAPPVPT 310 L PNLL LF R + + PP++K LP Y G+A ++ F +P D APP Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59 Query: 311 CETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRV 490 ET+ E+ +R R+ K+E+ +V EL+ ++P +DPN D +KTLFVAR+NY+T+ES++ Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119 Query: 491 KREFEAYGPIKRV 529 +REFE YGPIKR+ Sbjct: 120 RREFEVYGPIKRI 132
>RU17_DROME (P17133) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) Length = 448 Score = 112 bits (281), Expect = 6e-25 Identities = 60/131 (45%), Positives = 87/131 (66%), Gaps = 5/131 (3%) Frame = +2 Query: 152 LTPNLLKLFEARPMLEHKPPVQK----RKLPAYTGMAQFVSRFAEPGDPEYAPPVP-TCE 316 L PNLL LF AR + PPV K +K Y G+A+F++ F +P D P+P T E Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKDT----PLPKTVE 60 Query: 317 TKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKR 496 T+ E+ +R R+ K EQ A K+ +E+ ++P N T DP++TLF+AR+NY+TSES+++R Sbjct: 61 TRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRR 120 Query: 497 EFEAYGPIKRV 529 EFE YGPIK++ Sbjct: 121 EFEFYGPIKKI 131
>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 109 bits (272), Expect = 7e-24 Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 5/131 (3%) Frame = +2 Query: 152 LTPNLLKLFEARPMLEHKPPV-----QKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCE 316 L PNLL LF R + + PP+ +K Y G+A ++ F +P D APP E Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61 Query: 317 TKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKR 496 T+ E+ +R R+ K+E+ V EL+ ++P +D N D +KTLFVAR+NY+T+ES+++R Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121 Query: 497 EFEAYGPIKRV 529 EFE YGPIKR+ Sbjct: 122 EFEVYGPIKRI 132
>RU17_XENLA (P09406) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 471 Score = 109 bits (272), Expect = 7e-24 Identities = 56/131 (42%), Positives = 82/131 (62%), Gaps = 5/131 (3%) Frame = +2 Query: 152 LTPNLLKLFEARPMLEHKPPV-----QKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCE 316 L PNLL LF R + + PP+ +K Y G+A ++ F +P D APP E Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61 Query: 317 TKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKR 496 T+ E+ +R R+ K+E+ V EL+ ++P +D N D +KTLFVAR+NY+T+ES+++R Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121 Query: 497 EFEAYGPIKRV 529 EFE YGPIKR+ Sbjct: 122 EFEVYGPIKRI 132
>RU17_YEAST (Q00916) U1 small nuclear ribonucleoprotein 70 kDa homolog| Length = 300 Score = 61.6 bits (148), Expect = 2e-09 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 6/126 (4%) Frame = +2 Query: 170 KLFEARPMLEHKPPV-----QKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKK 334 +LF+ RP L +K P +++ P TG+A +S + E+ P + + Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEGSPNNHLQRYED 73 Query: 335 DRIRKLKLEQGADKVAKELQNYNPQSDPNTT-SDPYKTLFVARLNYETSESRVKREFEAY 511 ++ K+K Q D+ LQN+NP DP+ +DPY+T+F+ RL Y+ E +++ F + Sbjct: 74 IKLSKIKNAQLLDR---RLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKF 130 Query: 512 GPIKRV 529 G I+++ Sbjct: 131 GEIEKI 136
>RBM19_HUMAN (Q9Y4C8) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 960 Score = 42.4 bits (98), Expect = 0.001 Identities = 24/84 (28%), Positives = 42/84 (50%) Frame = +2 Query: 272 EPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLF 451 +P +PE VP ET ++ E+GAD + +++ + + S P TLF Sbjct: 683 DPAEPE---TVPDGETPEDENPT------EEGADNSSAKMEEEEEEEEEEEESLPGCTLF 733 Query: 452 VARLNYETSESRVKREFEAYGPIK 523 + LN++T+E ++K F G +K Sbjct: 734 IKNLNFDTTEEKLKEVFSKVGTVK 757
>P2OX_EMENI (Q5B2E9) Pyranose 2-oxidase (EC 1.1.3.10) (P2Ox) (Pyranose oxidase)| (PROD) (POD) (POx) (Pyranose:oxygen 2-oxidoreductase) (Glucose 2-oxidase) (FAD-oxidoreductase) Length = 591 Score = 42.0 bits (97), Expect = 0.001 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 6/129 (4%) Frame = +2 Query: 206 PPVQKRKLP--AYTGMAQFVSR----FAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQG 367 P + KR + Y G A+ R F++ Y P PT + K KDR+ ++ Q Sbjct: 409 PAIDKRTIVDLRYFGRAETQWRNRVTFSKKLTDAYGMPQPTFDFKLSTKDRLESHRMMQD 468 Query: 368 ADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRVGACGKS 547 +KVA EL Y P S+P + P L V + + +++ + +KR+ C ++ Sbjct: 469 MEKVAGELGGYLPGSEPQFLA-PGLALHVC-----GTTAALRKGCRSEDEMKRISVCDEN 522 Query: 548 QYRWSYSSL 574 W +L Sbjct: 523 SKVWGVENL 531
>NUCL_RAT (P13383) Nucleolin (Protein C23)| Length = 712 Score = 38.1 bits (87), Expect = 0.019 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +2 Query: 353 KLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 K+E + ELQ P+ PN S P KTLFV L+ +T+E +K FE Sbjct: 547 KMEIEGRTIRLELQG--PRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE 595
>NUCL_MESAU (P08199) Nucleolin (Protein C23)| Length = 713 Score = 38.1 bits (87), Expect = 0.019 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +2 Query: 353 KLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 K+E + ELQ P+ PN S P KTLFV L+ +T+E +K FE Sbjct: 544 KMEIEGRTIRLELQG--PRGSPNARSQPSKTLFVKGLSEDTTEETLKESFE 592
>NUCL_MACFA (Q4R4J7) Nucleolin| Length = 710 Score = 36.2 bits (82), Expect = 0.071 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +2 Query: 380 AKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 A L+ P+ PN S P KTLFV L+ +T+E +K F+ Sbjct: 552 AIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD 593
>NUCL_PONPY (Q5RF26) Nucleolin| Length = 711 Score = 36.2 bits (82), Expect = 0.071 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +2 Query: 380 AKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 A L+ P+ PN S P KTLFV L+ +T+E +K F+ Sbjct: 553 AIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD 594
>NUCL_HUMAN (P19338) Nucleolin (Protein C23)| Length = 709 Score = 36.2 bits (82), Expect = 0.071 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +2 Query: 380 AKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 A L+ P+ PN S P KTLFV L+ +T+E +K F+ Sbjct: 551 AIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFD 592
>CSP_PLASI (Q03110) Circumsporozoite protein precursor (CS)| Length = 386 Score = 35.4 bits (80), Expect = 0.12 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R DG+P +GQP G R AG P G +PA AG P G A Sbjct: 194 AGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGD-RAAGQPAGDRA 243 Score = 33.9 bits (76), Expect = 0.35 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R AG P G +PA G P G A+ Sbjct: 149 AGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGD-RADGQPAGDRAD 199 Score = 33.5 bits (75), Expect = 0.46 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R G P G +PA AG P G A+ Sbjct: 104 AGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGD-RAAGQPAGDRAD 154 Score = 33.1 bits (74), Expect = 0.60 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R DG+P +GQP G R G P G +PA AG P G A Sbjct: 185 AGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGD-RAAGQPAGDRA 234 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R DG+P +GQP G R AG P G +PA G P G A Sbjct: 122 AGDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RADGQPAGDRA 171 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R G P G +PA G P G A+ Sbjct: 113 AGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGD-RADGQPAGDRAD 163
>RBM19_MOUSE (Q8R3C6) Probable RNA-binding protein 19 (RNA-binding motif protein| 19) Length = 952 Score = 35.0 bits (79), Expect = 0.16 Identities = 34/137 (24%), Positives = 51/137 (37%), Gaps = 4/137 (2%) Frame = +2 Query: 125 LMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPAYTGMAQFVSRFAEPG--DPEYAP 298 L+ +G T + L+ EAR H + +P Y A A P D ++ Sbjct: 614 LLPEGGITAIV-EFLEPLEARKAFRHLAYSKFHHVPLYLEWAPIGVFGAAPQKKDSQHEQ 672 Query: 299 PVPTCETKAEK--KDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYE 472 P E + E K +E K + + + S P TLF+ LN+ Sbjct: 673 PAEKAEVEQETVLDPEGEKASVEGAEASTGKMEEEEEEEEEEEEESIPGCTLFIKNLNFS 732 Query: 473 TSESRVKREFEAYGPIK 523 T+E +K F G IK Sbjct: 733 TTEETLKGVFSKVGAIK 749 Score = 30.0 bits (66), Expect = 5.1 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 446 LFVARLNYETSESRVKREFEAYGPIKRV 529 LFV L+Y +SE +++ F AYGP+ + Sbjct: 402 LFVRNLSYTSSEEDLEKLFSAYGPLSEL 429
>CSP_PLAVB (P08677) Circumsporozoite protein precursor (CS)| Length = 378 Score = 34.7 bits (78), Expect = 0.21 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P GQP G R AG P G +PA AG P G A+ Sbjct: 158 AGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRAD 208 Score = 33.9 bits (76), Expect = 0.35 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R G P G +PA AG P G A+ Sbjct: 140 AGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGD-RAAGQPAGDRAD 190 Score = 33.5 bits (75), Expect = 0.46 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R AG P G +PA G P G A+ Sbjct: 104 AGDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RADGQPAGDRAD 154 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R G+P +GQP G R AG P G +PA AG P G A+ Sbjct: 176 AGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRAD 226 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R DG+P +GQP G R G P G +PA AG P G A Sbjct: 131 AGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGD-RAAGQPAGDRA 180 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R G+P +GQP G R AG P G +PA AG P G A Sbjct: 212 AGDRAAGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGD-RAAGQPAGDRA 261 Score = 32.0 bits (71), Expect = 1.3 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R G+P +GQP G R AG P G +PA AG P G A Sbjct: 194 AGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRA 243
>CSP_PLAVS (P13826) Circumsporozoite protein (CS) (Fragment)| Length = 343 Score = 34.7 bits (78), Expect = 0.21 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P GQP G R AG P G +PA AG P G A+ Sbjct: 133 AGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRAD 183 Score = 33.9 bits (76), Expect = 0.35 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R G P G +PA AG P G A+ Sbjct: 115 AGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGD-RAAGQPAGDRAD 165 Score = 33.5 bits (75), Expect = 0.46 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R AG P G +PA G P G A+ Sbjct: 79 AGDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RADGQPAGDRAD 129 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R G+P +GQP G R AG P G +PA AG P G A+ Sbjct: 151 AGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRAD 201 Score = 32.7 bits (73), Expect = 0.79 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R DG+P +GQP G R G P G +PA AG P G A Sbjct: 106 AGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGD-RAAGQPAGDRA 155 Score = 32.0 bits (71), Expect = 1.3 Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG R G+P +GQP G R AG P G +PA AG P G A Sbjct: 169 AGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGD-RAAGQPAGDRA 218 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 AG R DG+P +GQP G R G P G +PA G P G A+ Sbjct: 70 AGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGD-RADGQPAGDRAD 120 Score = 30.0 bits (66), Expect = 5.1 Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQP-GRRLAGPPKGSAPRQRPAAQAHG---AGPPYGPHA 159 AG R DG+P GQP G R AG P G R A QA G AG G +A Sbjct: 196 AGDRADGQPAGDRAAGQPAGDRAAGQPAG----DRAAGQAAGDRAAGQAAGGNA 245
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 33.5 bits (75), Expect = 0.46 Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1 Query: 13 GKRGDGRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQA--HGAGPPYGPHA 159 GK G P ++ + G PG +AGPP GS P P Q G P GP A Sbjct: 823 GKGERGAPGEKGEGGPPG--VAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 871 Score = 30.4 bits (67), Expect = 3.9 Identities = 23/59 (38%), Positives = 26/59 (44%), Gaps = 10/59 (16%) Frame = +1 Query: 13 GKRGD----GRPRQRDDEGQPGRR----LAGPP--KGSAPRQRPAAQAHGAGPPYGPHA 159 G +GD G P + D G PG R LAG P +G A P AGPP P A Sbjct: 660 GPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGPPGA 718
>GAR2_SCHPO (P41891) Protein gar2| Length = 500 Score = 33.5 bits (75), Expect = 0.46 Identities = 26/89 (29%), Positives = 42/89 (47%) Frame = +2 Query: 269 AEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTL 448 +E GD + + + + ++K R + E+ K+ K P D N T T+ Sbjct: 216 SESGDSDSSSDSESESSSEDEKKRKAEPASEERPAKITK------PSQDSNETC----TV 265 Query: 449 FVARLNYETSESRVKREFEAYGPIKRVGA 535 FV RL++ + + +EFE YG I VGA Sbjct: 266 FVGRLSWNVDDQWLGQEFEEYGTI--VGA 292
>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID| domain-containing protein 1B) (Osa homolog 2) (hOsa2) (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated factor 250b) (BAF250B) Length = 2236 Score = 33.1 bits (74), Expect = 0.60 Identities = 42/160 (26%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Frame = +2 Query: 11 QXSVAMGDHGNAMTRGNPDGGLQGRP--KGVPRANVQ------------QLKLMGQGHPT 148 Q S + G +G M++ P G P GVP A+ Q+ G P Sbjct: 819 QQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPC 878 Query: 149 GLTPNLLKLFEARPMLEHKPPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAE 328 G P L ++ A P P+ GM+Q G P PP+PT KA+ Sbjct: 879 GAVP-LGRMPSAGMQNRPFPGNMSSMTPSSPGMSQ-------QGGPGMGPPMPTVNRKAQ 930 Query: 329 KKDRIRKLKLEQGADKVAKELQNYNP---QSDPNTTSDPY 439 + + Q A A+ Q P QS +S PY Sbjct: 931 E----AAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPY 966
>GPMI_STRCO (Q9L214) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 511 Score = 32.7 bits (73), Expect = 0.79 Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Frame = +2 Query: 20 VAMGDHGNA--MTRGNPDGGLQGRPKGVPRANVQQLKLMGQ--GHPTGLTPNLLKLFEAR 187 VA+GDHGNA MT+ PDG + RP G N L ++ P P L + Sbjct: 433 VAVGDHGNAERMTKQAPDGSV--RPYGGHTTNPVPLVIVPNRTDTPAPTLPGTATLADVA 490 Query: 188 P----MLEHKPPVQKRKLPAYTG 244 P +L HKP PA TG Sbjct: 491 PTILHLLGHKPG------PAMTG 507
>COLQ_RAT (O35167) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 458 Score = 32.3 bits (72), Expect = 1.0 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 2/52 (3%) Frame = +1 Query: 10 AGKRGD-GRPRQRDDEGQPG-RRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 AG RG GRP +R +GQ G + GPP P +P Q GPP P A Sbjct: 223 AGHRGPTGRPGKRGKQGQKGDSGIMGPPGKPGPSGQPGRQG-PPGPPGPPSA 273
>HELZ_HUMAN (P42694) Probable helicase with zinc-finger domain (EC 3.6.1.-)| Length = 1942 Score = 32.3 bits (72), Expect = 1.0 Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 30/145 (20%) Frame = +2 Query: 104 ANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPP----VQKRKLPAYTGMAQF----- 256 AN+QQ LMG G P GL P L H+PP VQ + G F Sbjct: 1686 ANLQQNHLMGPGFPYGLPP-----------LPHRPPQNPFVQIQNHQHAIGQEPFHPLSS 1734 Query: 257 --VSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVA---------KELQNYN 403 VS + P EY P P + + RI ++ +++V+ KELQ+++ Sbjct: 1735 RTVSSSSLPSLEEYEPRGP---GRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHS 1791 Query: 404 PQSDPN----------TTSDPYKTL 448 QS N T+S PY+ + Sbjct: 1792 NQSSFNFSSPESWVNTTSSTPYQNI 1816
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = +1 Query: 13 GKRGD----GRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQA-HGAGPPYGP 153 GKRG+ G+P + D+G PG R A P G P+ P Q G G P P Sbjct: 220 GKRGENGLPGQPGLKGDQGVPGERGAAGPSG--PQGPPGEQGPEGIGKPGAP 269
>NODC_BRAJA (P26024) N-acetylglucosaminyltransferase (EC 2.4.1.-) (Nodulation| protein C) Length = 485 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/76 (32%), Positives = 35/76 (46%) Frame = -1 Query: 373 ICTLLKLKFPDSILLFGLSLARWDRRRILWVARLGKPRHKLRHPRVGRQLALLDGRLVLE 194 IC LL LK + L LS + W R++ + + + HP GR A + GRL+L Sbjct: 373 ICLLLPLK---AYALCTLSNSDWLSRKVTDMPTEEGKQPVILHPNAGRSPAGVGGRLLLF 429 Query: 193 HRPRLEQLEQVRREAR 146 R R L + R R Sbjct: 430 VRRRYRSLHRAWRRRR 445
>NSR1_YEAST (P27476) Nuclear localization sequence-binding protein (P67)| Length = 414 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/69 (26%), Positives = 39/69 (56%) Frame = +2 Query: 314 ETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVK 493 ++++EK++ K + + A++ E ++ N + T +P T+FV RL++ + +K Sbjct: 128 DSESEKEESNDKKRKSEDAEEEEDE-ESSNKKQKNEETEEP-ATIFVGRLSWSIDDEWLK 185 Query: 494 REFEAYGPI 520 +EFE G + Sbjct: 186 KEFEHIGGV 194
>PALI_EMENI (O93956) pH-response regulator protein palI/RIM9| Length = 549 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +1 Query: 37 RQRDDEGQPGRRLAGPPKGSAPRQR---PAAQAHGAGPPYG 150 R RD P R GPP G APR R P +G G PYG Sbjct: 315 RVRDQYSDPRR---GPPTGFAPRGRGGYPPRGGYGRGGPYG 352
>MYSC_ACACA (P10569) Myosin IC heavy chain| Length = 1168 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = +1 Query: 19 RGDGRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYG 150 RG P G PG R P G+APR R A GPP G Sbjct: 1081 RGGAPPPGAGRAGPPGGRGMPAPGGAAPRGRGAPPPGAGGPPGG 1124
>MSX1_CALJA (Q2VL84) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| Length = 297 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = +2 Query: 56 GNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPA 235 G P GG G+ G A + +G ++P+LL M +H+ P K A Sbjct: 16 GKPAGGGSGQAPGAAAATAAAMGADEEGAKPKVSPSLLPFSVEALMADHRKPGAKESSLA 75 Query: 236 YTGMAQFVSRFAEP 277 + AQ A+P Sbjct: 76 ASESAQAAGGLAQP 89
>MSX1_CALGO (Q2VL85) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| Length = 297 Score = 31.6 bits (70), Expect = 1.8 Identities = 20/74 (27%), Positives = 30/74 (40%) Frame = +2 Query: 56 GNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPA 235 G P GG G+ G A + +G ++P+LL M +H+ P K A Sbjct: 16 GKPAGGGSGQAPGAAAATAAAMGTDEEGAKPKVSPSLLPFSVEALMADHRKPGAKESSLA 75 Query: 236 YTGMAQFVSRFAEP 277 + AQ A+P Sbjct: 76 ASESAQAAGGLAQP 89
>BOLL_MACFA (Q8WP23) Protein boule-like| Length = 283 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 401 NPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 NP S P + +FV ++++T+ES +++ F YG +K V Sbjct: 20 NPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEV 62
>BOLL_HUMAN (Q8N9W6) Protein boule-like| Length = 283 Score = 31.2 bits (69), Expect = 2.3 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +2 Query: 401 NPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 NP S P + +FV ++++T+ES +++ F YG +K V Sbjct: 20 NPTSAPRYGTVIPNRIFVGGIDFKTNESDLRKFFSQYGSVKEV 62
>SYC_BURPS (Q63SS8) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 259 HKLRHPRVGRQLALLDGRLVLEHRPRLEQLEQVRREARRVAL-PHELE 119 ++ R P + RQL LL G L L R E L+ AR AL PHE+E Sbjct: 373 NRTREPALARQLRLLAGLLGLLGREPREFLQHAAGAARTGALEPHEIE 420
>SYC_BURMA (Q62J37) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 259 HKLRHPRVGRQLALLDGRLVLEHRPRLEQLEQVRREARRVAL-PHELE 119 ++ R P + RQL LL G L L R E L+ AR AL PHE+E Sbjct: 373 NRTREPALARQLRLLAGLLGLLGREPREFLQHAAGAARTGALEPHEIE 420
>BAIP3_HUMAN (O94812) BAI1-associated protein 3 (BAP3)| Length = 1187 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +2 Query: 314 ETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVK 493 E E +R+RK K A KV+ DPN SDPY L + + T E R + Sbjct: 178 EEHTEAIERVRKAKAPTYALKVSVMRAKNLLAKDPNGFSDPYCMLGILPASDATREPRAQ 237 Query: 494 RE 499 +E Sbjct: 238 KE 239
>RSP31_ARATH (P92964) Arginine/serine-rich splicing factor RSP31| Length = 264 Score = 31.2 bits (69), Expect = 2.3 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +2 Query: 440 KTLFVARLNYETSESRVKREFEAYGPIKRVGACGKSQYRWSY 565 + +FV YET +S ++R F+ YG + RV KS Y + Y Sbjct: 2 RPVFVGNFEYETRQSDLERLFDKYGRVDRVDM--KSGYAFVY 41
>RNP24_SCHPO (Q09100) RNA-binding protein rnp24| Length = 369 Score = 31.2 bits (69), Expect = 2.3 Identities = 13/37 (35%), Positives = 23/37 (62%) Frame = +2 Query: 419 NTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 ++ +P LFV L++ET+++ +K F G I+RV Sbjct: 221 SSKKEPSSILFVGNLDFETTDADLKEHFGQVGQIRRV 257
>RB15B_MOUSE (Q6PHZ5) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 564 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 404 PQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 P+ D T + LF+ L++ SE ++R FE YG I+ V Sbjct: 2 PEDDQRAT----RNLFIGNLDHSVSEVELRRAFEKYGIIEEV 39
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQPGRR----LAGPPKGSAPRQRPAAQAHGAGPPYGP 153 AGK DG R D G GR +AGPP G A + P+ +A AGPP P Sbjct: 811 AGK--DGPRGLRGDVGPVGRTGEQGIAGPP-GFAGEKGPSGEAGAAGPPGTP 859
>RB15B_HUMAN (Q8NDT2) Putative RNA-binding protein 15B (RNA-binding motif| protein 15B) Length = 563 Score = 31.2 bits (69), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 404 PQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 P+ D T + LF+ L++ SE ++R FE YG I+ V Sbjct: 2 PEDDQRAT----RNLFIGNLDHSVSEVELRRAFEKYGIIEEV 39
>HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mobility group| AT-hook protein 2) Length = 109 Score = 31.2 bits (69), Expect = 2.3 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Frame = +1 Query: 1 AAAAGKRGDGRPRQRDDE--GQPG-RRLAGPPKGSAPRQ-----RPAAQAHGAGPPYG 150 A A KRG GRPR++ E G+P +R G PKGS + + A+A G P G Sbjct: 21 APAPQKRGRGRPRKQQQEPTGEPSPKRPRGRPKGSKNKSPSKAAQKKAEATGEKRPRG 78
>ILVC_SYNPX (Q7U5Q1) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 331 Score = 30.8 bits (68), Expect = 3.0 Identities = 27/107 (25%), Positives = 43/107 (40%) Frame = +2 Query: 239 TGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDP 418 T M +S AE GD P + T +TKAE K +V ++Q+ Sbjct: 245 TSMRDSISNTAEYGDYVSGPRLITADTKAEMK-------------RVLADIQD------- 284 Query: 419 NTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRVGACGKSQYRW 559 + FVA E + R+ ++ PI++VG +S + W Sbjct: 285 ----GTFAKNFVAECEAGKPEMKKVRDRDSQHPIEKVGKGLRSMFSW 327
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 30.8 bits (68), Expect = 3.0 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEG--QPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 A + G G PR +G +PG P G+ P RPAA A G P GP Sbjct: 195 AARPGPGGPRPGPAQGGPRPGPGQGAPRPGATPGPRPAA-AQGGPRPGGP 243 Score = 30.0 bits (66), Expect = 5.1 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +1 Query: 1 AAAAGKRGDGRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 A AG+ G G R G PG AG P G R RP G G P GP Sbjct: 280 APGAGRPGGGGGGYRGGGGAPGAG-AGAPAGGGFRGRPGG---GGGRPGGP 326
>GRC3_KLULA (Q6CQ06) Protein GRC3| Length = 631 Score = 30.8 bits (68), Expect = 3.0 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 272 EPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKE--LQNYNPQSDPNTTSDPYKT 445 +PG PEY+PP K + K L QG K+ + + +PQ P T S+ ++ Sbjct: 289 DPGQPEYSPPESISWNKVDPKSMSLGQHLCQGRFTTIKQHFIGSSSPQDWPETYSNAVES 348 Query: 446 L 448 L Sbjct: 349 L 349
>UBXD2_HUMAN (Q92575) UBX domain-containing protein 2| Length = 508 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%) Frame = +2 Query: 296 PPVPTCETKAEKKDRIRKLKLEQGADKVAKE-----LQNYNPQSDPNTT 427 PP P +K+EK++ +RK LE+ D KE L+ + D N T Sbjct: 451 PPNPASSSKSEKREPVRKRVLEKRGDDFKKEGKIYRLRTQDDGEDENNT 499
>ROAA_MOUSE (Q99020) Heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B)| (CArG-binding factor-A) (CBF-A) Length = 285 Score = 30.8 bits (68), Expect = 3.0 Identities = 13/43 (30%), Positives = 23/43 (53%) Frame = +2 Query: 401 NPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 +P+ DP K +FV LN E +E +++ F +G I+ + Sbjct: 146 DPKKAMAMKKDPVKKIFVGGLNPEATEEKIREYFGQFGEIEAI 188
>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) Length = 1147 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +2 Query: 371 DKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 +K + Q PQ P T S TL+V +L+ T++ V E +GPI+ + Sbjct: 485 EKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESI 537
>COL8_CAEEL (P18833) Cuticle collagen 8 precursor| Length = 282 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Frame = +1 Query: 22 GDGRPRQRDDEGQPGRRLAGPPKGSAPRQRPAA-----QAHGAGPPYGP 153 G G P ++ D G+PG AG P PR P QA AGPP GP Sbjct: 172 GQGGPGEQGDAGRPGA--AGCPGPPGPRGEPGTEYRPGQAGRAGPP-GP 217
>RS10A_ARATH (Q9SW09) 40S ribosomal protein S10-1| Length = 177 Score = 30.4 bits (67), Expect = 3.9 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +1 Query: 19 RGDG-RPRQRDDEGQPGRRLAGPPKGSAPRQ-RPAAQAHGAGPPYG 150 R DG RPR D +G G G KG AP +P+ Q G P +G Sbjct: 115 RSDGDRPRFGDRDGYRGGPRGGDEKGGAPADFQPSFQGGGGRPGFG 160
>SYH_BUCAI (P57375) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 423 Score = 30.4 bits (67), Expect = 3.9 Identities = 21/79 (26%), Positives = 34/79 (43%) Frame = +2 Query: 329 KKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEA 508 +K I K + D V KE+ ++N + N T P T+ R + + + +F Sbjct: 47 EKTEIFKRAIGNVTDVVEKEMYSFNDRKGNNLTLRPEGTVGCVRAIIQNNLLQKSNKFWY 106 Query: 509 YGPIKRVGACGKSQYRWSY 565 GP+ R K +YR Y Sbjct: 107 LGPMFRYERPQKGRYRQFY 125
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +1 Query: 61 PGRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 P + + PP S+ + P HG GPP GPH+ Sbjct: 817 PLQPMTAPPSQSSAQPHPQPSLHGQGPP-GPHS 848
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/30 (43%), Positives = 20/30 (66%) Frame = +1 Query: 25 DGRPRQRDDEGQPGRRLAGPPKGSAPRQRP 114 DG+P ++G+PGR +GPP + PR +P Sbjct: 547 DGKPGPPGNQGEPGR--SGPPGPAGPRGQP 574
>COLQ_HUMAN (Q9Y215) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) (Acetylcholinesterase-associated collagen) Length = 456 Score = 30.4 bits (67), Expect = 3.9 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Frame = +1 Query: 10 AGKRGD-GRPRQRDDEGQPG-RRLAGPPKGSAPRQRPAAQAHGAGPPYG 150 AG RG GRP +R +GQ G + GPP P +P PP G Sbjct: 224 AGHRGPTGRPGKRGKQGQKGDSGVMGPPGKPGPSGQPGRPGPPGPPPAG 272
>BOLL_MOUSE (Q924M5) Protein boule-like| Length = 281 Score = 30.4 bits (67), Expect = 3.9 Identities = 13/43 (30%), Positives = 25/43 (58%) Frame = +2 Query: 401 NPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 NP S P + +FV ++++T+E+ +++ F YG +K V Sbjct: 20 NPTSGPRYGTVIPNRIFVGGIDFKTNENDLRKFFSQYGSVKEV 62
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 27.3 bits (59), Expect(2) = 5.0 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +2 Query: 158 PNLLKLFEARPMLEHKPPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPT 310 P+ L+ P + +PP PAY Q ++ P P Y+PP P+ Sbjct: 246 PSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPP-PPTYSPPPPS 295 Score = 25.8 bits (55), Expect(2) = 3.9 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 79 GPPKGSAPRQRPAAQAHGAGPPYGPH 156 GP + QRP + +HG PP G H Sbjct: 130 GPGHLPSHGQRPPSPSHGHAPPSGGH 155 Score = 23.1 bits (48), Expect(2) = 3.9 Identities = 13/35 (37%), Positives = 14/35 (40%) Frame = +2 Query: 206 PPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPT 310 PP +R P SR P P YA P PT Sbjct: 163 PPSHRRPSPP--------SRHGHPPPPTYAQPPPT 189 Score = 21.2 bits (43), Expect(2) = 5.0 Identities = 9/26 (34%), Positives = 11/26 (42%) Frame = +1 Query: 82 PPKGSAPRQRPAAQAHGAGPPYGPHA 159 PP P P ++ H PP HA Sbjct: 208 PPTHVQPTPSPPSRGHQPQPPTHRHA 233
>SYFB_XANC5 (Q3BRU2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 792 Score = 30.0 bits (66), Expect = 5.1 Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 11/36 (30%) Frame = -1 Query: 274 LGKPRHK-----------LRHPRVGRQLALLDGRLV 200 LG+P H +RH RVG QL LLDGR V Sbjct: 259 LGQPMHAFDLDTLQGPIGVRHSRVGEQLVLLDGRQV 294
>TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)| Length = 1163 Score = 30.0 bits (66), Expect = 5.1 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = -2 Query: 204 LCSSIGRASNSLSRFGVRPVGWPCPMSLSCWTLARGTPFGRPCKPPSGLPLVIALPWSPI 25 L S+ G+ SLS RP+ P P+ S W+ + P P +P ++ P+S Sbjct: 319 LFSTPGQLPQSLSSLSTRPL--PEPLQASLWSPSAVCGMTTPPTSPGNVPADLSHPYSKA 376 Query: 24 ATLXCGGR 1 GG+ Sbjct: 377 FGTTTGGK 384
>TRUB_AERPE (Q9YDC3) Probable tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA| pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase) Length = 293 Score = 30.0 bits (66), Expect = 5.1 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = +2 Query: 68 GGLQGRPKGVPRANVQQLKLMGQGHP--TGLTPNLLK 172 G LQG P+G PRA G+G+P TG+ P L+ Sbjct: 7 GSLQGGPRGDPRAPASPQGAAGRGYPKVTGVLPVALE 43
>MIAA_BACHK (Q6HF97) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 317 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/58 (25%), Positives = 32/58 (55%) Frame = +2 Query: 332 KDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 ++++ KL LE+G + V K+LQ +P+S ++ + + A + TS ++ + E Sbjct: 128 REQMEKLALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFHTSGEKMSDQLE 185
>MIAA_BACCZ (Q636W2) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 317 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/58 (25%), Positives = 32/58 (55%) Frame = +2 Query: 332 KDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 ++++ KL LE+G + V K+LQ +P+S ++ + + A + TS ++ + E Sbjct: 128 REQMEKLALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFHTSGEKMSDQLE 185
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 30.0 bits (66), Expect = 5.1 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Frame = +1 Query: 25 DGRPRQRDDEGQPGRR-------LAGPPKGSAPRQRPAAQA--HGAGPPYGPHA 159 +G P + + G PG + AGPP GS P P Q G P GP A Sbjct: 817 NGEPGAKGERGAPGEKGEGGPPGAAGPPGGSGPAGPPGPQGVKGERGSPGGPGA 870
>MIAA_BACAN (Q81JG8) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 314 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/58 (25%), Positives = 32/58 (55%) Frame = +2 Query: 332 KDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFE 505 ++++ KL LE+G + V K+LQ +P+S ++ + + A + TS ++ + E Sbjct: 125 REQMEKLALERGVEYVHKKLQEVDPESAERIHANNVRRVIRALEIFHTSGEKMSDQLE 182
>PRTP_HHV1F (P06490) Processing and transport protein (Infected cell protein| 18.5) (ICP18.5 protein) Length = 780 Score = 30.0 bits (66), Expect = 5.1 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 5/52 (9%) Frame = +1 Query: 1 AAAAGKRGDGRPRQRDDEG-----QPGRRLAGPPKGSAPRQRPAAQAHGAGP 141 A A G +G P DD+G + G R G P G + P+ +A G GP Sbjct: 429 AGAGGPKGGAGP---DDDGDRVAVEEGARGLGAPGGGGEDEAPSPRARGTGP 477
>PPIL4_MOUSE (Q9CXG3) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 30.0 bits (66), Expect = 5.1 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +2 Query: 314 ETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVK 493 E KAEK+ + + + LE D P +D P LFV +LN T++ ++ Sbjct: 210 EIKAEKEAKTQAILLEMVGDL---------PDAD---IKPPENVLFVCKLNPVTTDEDLE 257 Query: 494 REFEAYGPIK 523 F +GPI+ Sbjct: 258 IIFSRFGPIR 267
>PPIL4_HUMAN (Q8WUA2) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-like protein PPIL4) Length = 492 Score = 30.0 bits (66), Expect = 5.1 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +2 Query: 314 ETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVK 493 E KAEK+ + + + LE D P +D P LFV +LN T++ ++ Sbjct: 210 EIKAEKEAKTQAILLEMVGDL---------PDAD---IKPPENVLFVCKLNPVTTDEDLE 257 Query: 494 REFEAYGPIK 523 F +GPI+ Sbjct: 258 IIFSRFGPIR 267
>PALI_MAGGR (Q51MB1) pH-response regulator protein palI/RIM9| Length = 736 Score = 30.0 bits (66), Expect = 5.1 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +1 Query: 19 RGDGRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHAE 162 RG P R G P R A PP R+ A+A+G P GP+ + Sbjct: 360 RGGYGPPPRGGYGPPMRGRAPPPGYQYDRRGSPAEAYGPPPGQGPYGQ 407
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 30.0 bits (66), Expect = 5.1 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 17/67 (25%) Frame = +1 Query: 13 GKRGD--GRPRQRDDEGQPGRRLAGPPKGS---------------APRQRPAAQAHGAGP 141 G RGD G R +PG R AGP G+ APR A + GAG Sbjct: 187 GDRGDRQGAARPGGQAPRPGARPAGPRPGNNPFTSGGSTGMARPQAPRPGGAPRPGGAGA 246 Query: 142 PYGPHAE 162 P GP + Sbjct: 247 PGGPRPQ 253
>CJ035_HUMAN (Q96D05) Protein C10orf35| Length = 121 Score = 30.0 bits (66), Expect = 5.1 Identities = 16/35 (45%), Positives = 19/35 (54%) Frame = +1 Query: 49 DEGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 D+ R PP+GS PRQ + HGA PP GP Sbjct: 13 DDDPRVRTTTQPPRGSIPRQSFFNRGHGA-PPGGP 46
>HNF3B_RAT (P32182) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 458 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 52 EGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 +G P L+ P +P Q+ A AH GPP+ P Sbjct: 323 KGTPASALSPPEPAPSPGQQQQAAAHLLGPPHHP 356
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 446 LFVARLNYETSESRVKREFEAYGPIKRV 529 LFV LN+ T E ++ F ++GPI V Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEV 35
>NRG1_XENLA (O93383) Pro-neuregulin-1, membrane-bound isoform precursor| (Pro-NRG1) [Contains: Neuregulin-1] Length = 677 Score = 29.6 bits (65), Expect = 6.7 Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 3/68 (4%) Frame = +2 Query: 311 CETKAEKK---DRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSE 481 C+TK ++K DR+R+ E+ + K+ + +NP++ P + +V++ N +SE Sbjct: 284 CKTKKQRKKLNDRLRQSLRERNKNITNKDNRPHNPKNPPPRKNVQLVNQYVSK-NVISSE 342 Query: 482 SRVKREFE 505 ++RE E Sbjct: 343 HVIERETE 350
>GIDA_ERWCT (Q6CYI6) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/48 (31%), Positives = 26/48 (54%) Frame = -1 Query: 253 LRHPRVGRQLALLDGRLVLEHRPRLEQLEQVRREARRVALPHELELLD 110 LR +GR+L ++D +LE +E+ R+ R + + + ELLD Sbjct: 446 LRLTEMGRELGMVDDHRWARFNEKLENIEKERQRLRDIHVHPQSELLD 493
>RS3_BURPS (Q63Q17) 30S ribosomal protein S3| Length = 266 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 22 GDGRPRQRDDEGQPGRRLAGPPKGS 96 GD RPR+ + G PG R GP +G+ Sbjct: 232 GDRRPRRDGEGGAPGARRGGPRRGA 256
>RS3_BURP1 (Q3JMR9) 30S ribosomal protein S3| Length = 266 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 22 GDGRPRQRDDEGQPGRRLAGPPKGS 96 GD RPR+ + G PG R GP +G+ Sbjct: 232 GDRRPRRDGEGGAPGARRGGPRRGA 256
>RS3_BURMA (Q62GL1) 30S ribosomal protein S3| Length = 266 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +1 Query: 22 GDGRPRQRDDEGQPGRRLAGPPKGS 96 GD RPR+ + G PG R GP +G+ Sbjct: 232 GDRRPRRDGEGGAPGARRGGPRRGA 256
>PABP3_HUMAN (Q9H361) Polyadenylate-binding protein 3 (Poly(A)-binding protein| 3) (PABP 3) (Testis-specific poly(A)-binding protein) Length = 631 Score = 29.6 bits (65), Expect = 6.7 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 6/55 (10%) Frame = +2 Query: 413 DPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRVGAC------GKSQYRW 559 +P+T S P +L+V L+ + +E+ + +F GPI + C G S Y + Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAY 56
>HNF3B_HUMAN (Q9Y261) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 457 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 52 EGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 +G P L+ P +P Q+ A AH GPP+ P Sbjct: 323 KGTPAAALSPPEPAPSPGQQQQAAAHLLGPPHHP 356
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +1 Query: 28 GRPRQRDDEGQPGRRLAGPPKGSAPRQRPAAQAHGAGPP 144 G P + + G PG G PKG + A AGPP Sbjct: 1255 GEPGEAGNPGPPGEAGVGGPKGERGEKGEAGPPGAAGPP 1293
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 29.6 bits (65), Expect = 6.7 Identities = 25/101 (24%), Positives = 41/101 (40%) Frame = +2 Query: 38 GNAMTRGNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQ 217 G R +PDGGL+G +G PR P G +P E+ E P + Sbjct: 1664 GPCSQRSSPDGGLKGSAEGPPR------------RPGGPSPLKAVPGESSSASEPSEPHR 1711 Query: 218 KRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDR 340 +R ++ G + + R + PP P ++++ DR Sbjct: 1712 RRPPASHEGERKELPR------EQPLPPGPIGTERSQRTDR 1746
>HNF3B_MOUSE (P35583) Hepatocyte nuclear factor 3-beta (HNF-3B) (Forkhead box| protein A2) Length = 459 Score = 29.6 bits (65), Expect = 6.7 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +1 Query: 52 EGQPGRRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 +G P L+ P +P Q+ A AH GPP+ P Sbjct: 324 KGAPASALSPPEPAPSPGQQQQAAAHLLGPPHHP 357
>SHH_RAT (Q63673) Sonic hedgehog protein precursor (SHH) [Contains: Sonic| hedgehog protein N-product; Sonic hedgehog protein C-product] Length = 437 Score = 29.6 bits (65), Expect = 6.7 Identities = 14/29 (48%), Positives = 16/29 (55%) Frame = +1 Query: 70 RLAGPPKGSAPRQRPAAQAHGAGPPYGPH 156 R G GS P + A+A GAGPP G H Sbjct: 380 RTDGGGGGSIPAPQSVAEARGAGPPAGIH 408
>MSX1_SAGOE (Q2VL82) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| Length = 297 Score = 29.6 bits (65), Expect = 6.7 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 1/85 (1%) Frame = +2 Query: 56 GNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPA 235 G P GG G+ A + +G ++P+LL M +H+ P K A Sbjct: 16 GKPAGGGSGQAPSAAAATAAAMGADEEGAKPKVSPSLLPFSVEALMADHRKPGAKESSLA 75 Query: 236 YTGMAQFVSRFAEP-GDPEYAPPVP 307 + AQ A+P G P + VP Sbjct: 76 ASESAQAAGGLAQPLGVPPGSLGVP 100
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.6 bits (65), Expect = 6.7 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +1 Query: 10 AGKRGDGRPRQRDDEGQPGRR----LAGPPKGSAPRQRPAAQAHGAGPPYGP 153 AGK G PR D+G GR GPP G A + P+ +A AGPP P Sbjct: 813 AGKEGLRGPR--GDQGPVGRTGEVGAVGPP-GFAGEKGPSGEAGTAGPPGTP 861
>RBM3_HUMAN (P98179) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) (RNPL) Length = 157 Score = 29.6 bits (65), Expect = 6.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 446 LFVARLNYETSESRVKREFEAYGPIKRV 529 LFV LN+ T E ++ F ++GPI V Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEV 35
>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)| Length = 296 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 6/45 (13%) Frame = +1 Query: 28 GRPRQRDDEGQPG------RRLAGPPKGSAPRQRPAAQAHGAGPP 144 G P+QR +G P R GPP + P+ RP H G P Sbjct: 230 GGPQQRPPQGPPPPGGPQPRPPQGPPPPTGPQPRPTQGPHPTGGP 274 Score = 29.3 bits (64), Expect = 8.7 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Frame = +1 Query: 28 GRPRQRDDEGQPG-----RRLAGPPKGSAPRQRPAAQAHGAGPPYGP 153 G P R +G P R GPP P+QRP G PP GP Sbjct: 203 GGPHPRPTQGPPPTGPQPRPTQGPPPTGGPQQRP---PQGPPPPGGP 246
>TRA2_DROME (P19018) Transformer-2 sex-determining protein| Length = 264 Score = 29.3 bits (64), Expect = 8.7 Identities = 22/81 (27%), Positives = 34/81 (41%) Frame = +2 Query: 287 EYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLN 466 E PP P + +DR R K + +PQ+ + + V LN Sbjct: 66 ESPPPEPRHRSGRSSRDRERMHKSRE------------HPQAS--------RCIGVFGLN 105 Query: 467 YETSESRVKREFEAYGPIKRV 529 TS+ +V+ F YGPI+R+ Sbjct: 106 TNTSQHKVRELFNKYGPIERI 126
>PKSM_BACSU (P40872) Putative polyketide synthase pksM| Length = 4262 Score = 29.3 bits (64), Expect = 8.7 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Frame = +2 Query: 167 LKLFEARPMLEHKPPVQKRKLPAYTGMAQFVSRF---AEPGDPEYAPPVPTCETKAEKKD 337 L+ E M EH Q + G VSRF EP PE A P + E KD Sbjct: 3347 LEAEEGIRMFEHILAQQDAQHLVIAGQPSRVSRFLGMTEPAIPEPATQAPLAQ---ENKD 3403 Query: 338 RIRKLKLEQGADKVAKE 388 ++ L +E+ + KE Sbjct: 3404 EVKTLSIEKRLEHDLKE 3420
>KCNH5_RAT (Q9EPI9) Potassium voltage-gated channel subfamily H member 5| (Voltage-gated potassium channel subunit Kv10.2) (Ether-a-go-go potassium channel 2) (rEAG2) Length = 988 Score = 29.3 bits (64), Expect = 8.7 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 7/137 (5%) Frame = +2 Query: 41 NAMTRGNPDGGLQGRPKGVPRANVQQLKLMGQGHP--TGLTPNLLKLF---EARPMLEHK 205 N +T+ G L PKG N + + +G+T + L+L EAR LEH Sbjct: 829 NNVTKAESMGLLSEDPKGSDSENSVTKNPLRKTDSCDSGITKSDLRLDKAGEARSPLEHS 888 Query: 206 PPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGA--DKV 379 P K P Y PE A E K E K+ I+ L A +V Sbjct: 889 PSQADAKHPFYP-------------IPEQALQTTLQEVKHELKEDIQLLSCRMTALEKQV 935 Query: 380 AKELQNYNPQSDPNTTS 430 A+ L+ + +S P T+S Sbjct: 936 AEILKLLSEKSVPQTSS 952
>FBS1_HUMAN (P62706) Fibrosin-1| Length = 177 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = -2 Query: 201 CSSIGRASNSLSRFGVRPVGWPCPMSLSCWTLARGT--PFGRPCKPPSGLP 55 C GRA + SR G W C S W L R T P R C+P + LP Sbjct: 19 CRVTGRAEVTASREGRGACAWECGSSRGPWGLLRYTFAPV-RACRPWACLP 68
>TIG_CAUCR (O87705) Trigger factor (TF)| Length = 452 Score = 29.3 bits (64), Expect = 8.7 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 9/119 (7%) Frame = +2 Query: 83 RPKGVPRANVQQL---KLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPA------ 235 RP VP A+V++L LMG+ L K+ E + +P Q P+ Sbjct: 45 RPGKVPTAHVRRLYGKALMGEVIEQALNETTTKVLEDNKL---RPAGQPELNPSSDMDKV 101 Query: 236 YTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAKELQNYNPQS 412 G A PE+ P PT + ++ ++++ D++AK+ + Y P++ Sbjct: 102 IAGGEDLSFDLAVEVMPEFEPIDPTSIELVKPVYKVSDEEVQEALDELAKQARTYEPRT 160
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 29.3 bits (64), Expect = 8.7 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%) Frame = +2 Query: 266 FAEPGDPEYAPPVPTCETKAEKKDRIRKLKLE--QGADKVAKELQNYNPQSD---PNTTS 430 F +P D E A E +K K+++E QG D E + Y + D P +T Sbjct: 602 FKKPDDVEKA-----LEVSHDKHFFGCKIEVEPYQGYDVEDNEFRPYEAELDEYHPKST- 655 Query: 431 DPYKTLFVARLNYETSESRVKREFEAYGPI 520 +TLF+ L + + ++ FEA+G I Sbjct: 656 ---RTLFIGNLEKDITAGELRSHFEAFGEI 682
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 29.3 bits (64), Expect = 8.7 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 4/52 (7%) Frame = +1 Query: 7 AAGKRGDGRPRQRDDEG----QPGRRLAGPPKGSAPRQRPAAQAHGAGPPYG 150 A+G G RP R G +PG GPP+ AP RP A G G G Sbjct: 180 ASGGTGAPRPGPRPHPGMMPPRPGASAGGPPRPQAP--RPQAPRPGPGTAGG 229
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +2 Query: 407 QSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKRV 529 QS + D + LFV L++ET+E ++ F YG I+ + Sbjct: 45 QSAASGQRDDDRKLFVGGLSWETTEKELRDHFGKYGEIESI 85
>ROA0_HUMAN (Q13151) Heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0)| Length = 305 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = +2 Query: 446 LFVARLNYETSESRVKREFEAYGPI 520 LF+ LN +TSES ++ FEA+G + Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTL 33
>PUF68_DROME (Q8T6B9) Poly U-binding splicing factor half pint (68 kDa poly| U-binding splicing factor) (Protein half pint) (PUF60 homolog) Length = 637 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = +2 Query: 359 EQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPI 520 +Q D+V +E +++N ++VA ++ + SE +K FEA+GPI Sbjct: 213 QQVIDEVQEEAKSFN-------------RIYVASIHPDLSEEDIKSVFEAFGPI 253
>MSX1_BOVIN (O02786) Homeobox protein MSX-1 (Msh homeobox 1-like protein)| Length = 297 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/74 (25%), Positives = 31/74 (41%) Frame = +2 Query: 56 GNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHKPPVQKRKLPA 235 G P GG G+ A + +G ++P+LL M +H+ P K+ + A Sbjct: 16 GKPAGGGGGQTPSTTAATAAAMGADAEGAKPKVSPSLLPFSVEALMADHRKPGAKKSVLA 75 Query: 236 YTGMAQFVSRFAEP 277 + AQ A+P Sbjct: 76 ASEGAQAAGGSAKP 89
>Y1074_GEOSL (P62036) UPF0082 protein GSU1074| Length = 247 Score = 29.3 bits (64), Expect = 8.7 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = +2 Query: 335 DRIRKLKLEQGADKVAKELQNYNPQSDPNTTSDPYKTLFVARLNYETSE 481 +++ + LE GAD VA E + Y +DP D + L A +E++E Sbjct: 149 EKLFETALEAGADDVADEEEQYEVLTDPAAFIDVREALEKAGFPFESAE 197
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = +1 Query: 61 PGRRLAGPPKGSAPRQRPAAQAHGAGPPYGPHA 159 P + + PP ++ + P HG GPP GPH+ Sbjct: 816 PLQPMTAPPSQNSAQPHPQPSLHGQGPP-GPHS 847
>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich| proteoglycan 1) Length = 206 Score = 29.3 bits (64), Expect = 8.7 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Frame = +1 Query: 28 GRPRQRDDEG--QPGRRLAGPPKGSAPRQRPAAQAHGAGPP 144 G P Q +G QPG PP+G P+QRP GPP Sbjct: 115 GPPPQGGPQGPPQPGNPQGPPPQGG-PQQRPPQPGKPQGPP 154 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,090,318 Number of Sequences: 219361 Number of extensions: 1834410 Number of successful extensions: 8880 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 7583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8802 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
