ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62n17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
2dbj|AK066084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
3dbj|AK065331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 2e-10
4emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4,... 60 1e-05
5gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosom... 44 0.57
6gb|AC124729.4| Mus musculus BAC clone RP23-479H9 from chromosome... 44 0.57
7gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, com... 42 2.3
8ref|NM_010585.2| Mus musculus inositol 1,4,5-triphosphate recept... 42 2.3
9gb|BC054120.1| Mus musculus integrator complex subunit 7, mRNA (... 42 2.3
10ref|NM_178632.4| Mus musculus integrator complex subunit 7 (Ints... 42 2.3
11dbj|AK137477.1| Mus musculus adult male bone cDNA, RIKEN full-le... 42 2.3
12gb|AC096644.2| Homo sapiens chromosome 1 clone RP11-410C4, compl... 42 2.3
13gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574... 42 2.3
14dbj|AK040344.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 42 2.3
15dbj|AK052103.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN ... 42 2.3
16dbj|AK034856.1| Mus musculus 12 days embryo embryonic body betwe... 42 2.3
17dbj|AK049015.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 2.3
18dbj|AK086462.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 42 2.3
19dbj|AK085362.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 2.3
20dbj|AK085336.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 42 2.3
21ref|XM_223075.3| PREDICTED: Rattus norvegicus similar to DKFZP43... 42 2.3
22emb|X15373.1|MMP400 Mouse cerebellum mRNA for P400 protein 42 2.3
23gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K1... 40 8.9
24gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 8.9
25gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.9
26gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence 40 8.9
27gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, c... 40 8.9
28ref|XM_817074.1| Trypanosoma brucei TREU927 clone RPCI93-10K10 k... 40 8.9
29ref|XM_500844.1| Yarrowia lipolytica CLIB122, YALI0B13530g predi... 40 8.9
30gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, r... 40 8.9
31gb|AC106783.3| Homo sapiens chromosome 16 clone RP11-347K10, com... 40 8.9
32emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone... 40 8.9
33emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, co... 40 8.9
34gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65... 40 8.9
35emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 8.9
36emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chr... 40 8.9
37dbj|D14400.1|XELIP3R X. laevis mRNA for inositol 1,4,5-trisphosp... 40 8.9 
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Minus

                                                                            
Query: 133      cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 192
                ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 20950967 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 20950908

                                                                            
Query: 193      ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 252
                 ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 20950907 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 20950848

                                                                            
Query: 253      caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 312
                ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 20950847 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 20950788

                      
Query: 313      ctacag 318
                ||||||
Sbjct: 20950787 ctacag 20950782



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 434      agctccgacgactatgatggtggctacaagaa 465
                ||||| ||||||||||||||||||||||||||
Sbjct: 20950591 agctcagacgactatgatggtggctacaagaa 20950560



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                            
Query: 578      agcaccgaggactacagcagtggtaagaatacctccaacactgatgactatgacagcagt 637
                |||||||  ||||||  ||||||||||||  |||||||||||||||  ||||   |||||
Sbjct: 20950510 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 20950451

                           
Query: 638      ggctacaacaa 648
                |||||||||||
Sbjct: 20950450 ggctacaacaa 20950440



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 20       atggcagatgagtatgatcgcagc 43
                ||||||||||||||||||||||||
Sbjct: 20951095 atggcagatgagtatgatcgcagc 20951072
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>dbj|AK066084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051M03, full
           insert sequence
          Length = 1261

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Plus

                                                                       
Query: 133 cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 192
           ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 183 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 242

                                                                       
Query: 193 ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 252
            ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 243 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 302

                                                                       
Query: 253 caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 312
           ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 303 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 362

                 
Query: 313 ctacag 318
           ||||||
Sbjct: 363 ctacag 368



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 434 agctccgacgactatgatggtggctacaagaa 465
           ||||| ||||||||||||||||||||||||||
Sbjct: 559 agctcagacgactatgatggtggctacaagaa 590



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 578 agcaccgaggactacagcagtggtaagaatacctccaacactgatgactatgacagcagt 637
           |||||||  ||||||  ||||||||||||  |||||||||||||||  ||||   |||||
Sbjct: 640 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 699

                      
Query: 638 ggctacaacaa 648
           |||||||||||
Sbjct: 700 ggctacaacaa 710



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 20 atggcagatgagtatgatcgcagc 43
          ||||||||||||||||||||||||
Sbjct: 55 atggcagatgagtatgatcgcagc 78
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>dbj|AK065331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M22, full
            insert sequence
          Length = 3861

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 149/186 (80%)
 Strand = Plus / Plus

                                                                        
Query: 133  cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 192
            ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 2798 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 2857

                                                                        
Query: 193  ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 252
             ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 2858 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 2917

                                                                        
Query: 253  caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 312
            ||||||  |||| |||||||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 2918 caaatccggcacagatgactacagtggtggcggcggctacaacaaatctggcgccgacga 2977

                  
Query: 313  ctacag 318
            ||||||
Sbjct: 2978 ctacag 2983



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                            
Query: 434  agctccgacgactatgatggtggctacaagaa 465
            ||||| ||||||||||||||||||||||||||
Sbjct: 3174 agctcagacgactatgatggtggctacaagaa 3205



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                        
Query: 578  agcaccgaggactacagcagtggtaagaatacctccaacactgatgactatgacagcagt 637
            |||||||  ||||||  ||||||||||||  |||||||||||||||  ||||   |||||
Sbjct: 3255 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 3314

                       
Query: 638  ggctacaacaa 648
            |||||||||||
Sbjct: 3315 ggctacaacaa 3325



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 20   atggcagatgagtatgatcgcagc 43
            ||||||||||||||||||||||||
Sbjct: 2670 atggcagatgagtatgatcgcagc 2693
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>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09,
             complete sequence
          Length = 96079

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 148/186 (79%), Gaps = 1/186 (0%)
 Strand = Plus / Minus

                                                                         
Query: 133   cttcaacaaatccagcaacgacaacaatgatggtgggtataagaacaccaacacggatga 192
             ||||||| | ||| |||||||| |||||||  |||| || |||||||||||||| |||||
Sbjct: 54198 cttcaacgagtccggcaacgacgacaatgagagtggctacaagaacaccaacactgatga 54139

                                                                         
Query: 193   ctacagtagcagtggcggctacgacaagtccagcacagacagtttagctggcggcttgac 252
              ||  | |||| |||  ||||| ||||||||| ||| |||   ||| |||||||||| | 
Sbjct: 54138 atatggcagcactggtagctacaacaagtccaacaccgacgacttaactggcggcttcaa 54079

                                                                         
Query: 253   caaatctagcaccgatgactacaatggcagtggcagttacaacaaaactggtgccgaaga 312
             ||||||  |||| ||| |||||| |||  | ||| | ||||||||| |||| ||||| ||
Sbjct: 54078 caaatccggcacagat-actacagtggtggcggcggctacaacaaatctggcgccgacga 54020

                   
Query: 313   ctacag 318
             ||||||
Sbjct: 54019 ctacag 54014



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 434   agctccgacgactatgatggtggctacaagaa 465
             ||||| ||||||||||||||||||||||||||
Sbjct: 53782 agctcagacgactatgatggtggctacaagaa 53751



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 578   agcaccgaggactacagcagtggtaagaatacctccaacactgatgactatgacagcagt 637
             |||||||  ||||||  ||||||||||||  |||||||||||||||  ||||   |||||
Sbjct: 53701 agcaccggcgactacgacagtggtaagaacgcctccaacactgatggatatggtggcagt 53642

                        
Query: 638   ggctacaacaa 648
             |||||||||||
Sbjct: 53641 ggctacaacaa 53631



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 20    atggcagatgagtatgatcgcagc 43
             ||||||||||||||||||||||||
Sbjct: 54327 atggcagatgagtatgatcgcagc 54304
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>gb|AC141565.3| Mus musculus BAC clone RP23-160M21 from chromosome 14, complete sequence
          Length = 210128

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 625    ctatgacagcagtggctacaacaagc 650
              |||||||||||||||||||| |||||
Sbjct: 191565 ctatgacagcagtggctacagcaagc 191590
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>gb|AC124729.4| Mus musculus BAC clone RP23-479H9 from chromosome 14, complete sequence
          Length = 176086

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 625   ctatgacagcagtggctacaacaagc 650
             |||||||||||||||||||| |||||
Sbjct: 19127 ctatgacagcagtggctacagcaagc 19152
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>gb|AC132830.12| Mus musculus chromosome 1, clone RP24-566B6, complete sequence
          Length = 205300

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 473    gccgatgccggctatggcgaa 493
              |||||||||||||||||||||
Sbjct: 146420 gccgatgccggctatggcgaa 146440
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>ref|NM_010585.2| Mus musculus inositol 1,4,5-triphosphate receptor 1 (Itpr1), mRNA
          Length = 9848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 619  tgatgactatgacagcagtgg 639
            |||||||||||||||||||||
Sbjct: 2776 tgatgactatgacagcagtgg 2796
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>gb|BC054120.1| Mus musculus integrator complex subunit 7, mRNA (cDNA clone
           MGC:59468 IMAGE:6506658), complete cds
          Length = 4206

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 109 gccgatgccggctatggcgaa 129
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>ref|NM_178632.4| Mus musculus integrator complex subunit 7 (Ints7), mRNA
          Length = 4206

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 109 gccgatgccggctatggcgaa 129
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>dbj|AK137477.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830108A05 product:inositol
            1,4,5-triphosphate receptor 1, full insert sequence
          Length = 3806

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 619  tgatgactatgacagcagtgg 639
            |||||||||||||||||||||
Sbjct: 2800 tgatgactatgacagcagtgg 2820
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>gb|AC096644.2| Homo sapiens chromosome 1 clone RP11-410C4, complete sequence
          Length = 151900

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     tttctctttattttgagatgg 23
             |||||||||||||||||||||
Sbjct: 80106 tttctctttattttgagatgg 80086
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>gb|AC068499.1|AC068499 Homo sapiens chromosome 19, cosmid R26574 (LLNL-R_225F10), complete
            sequence
          Length = 36431

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 3    tttctctttattttgagatgg 23
            |||||||||||||||||||||
Sbjct: 3937 tttctctttattttgagatgg 3957
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>dbj|AK040344.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430088A22 product:hypothetical protein,
           full insert sequence
          Length = 1533

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 150 gccgatgccggctatggcgaa 170
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>dbj|AK052103.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length
           enriched library, clone:D230046C07 product:hypothetical
           ARM repeat structure containing protein, full insert
           sequence
          Length = 4001

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 128 gccgatgccggctatggcgaa 148
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>dbj|AK034856.1| Mus musculus 12 days embryo embryonic body between diaphragm region
           and neck cDNA, RIKEN full-length enriched library,
           clone:9430048M23 product:RIKEN cDNA 5930412E23 gene,
           full insert sequence
          Length = 4198

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 126 gccgatgccggctatggcgaa 146
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>dbj|AK049015.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230091M20 product:inositol
            1,4,5-triphosphate receptor 1, full insert sequence
          Length = 3510

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 619  tgatgactatgacagcagtgg 639
            |||||||||||||||||||||
Sbjct: 2412 tgatgactatgacagcagtgg 2432
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>dbj|AK086462.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930030K15 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3253

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 156 gccgatgccggctatggcgaa 176
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>dbj|AK085362.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630016B11 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3178

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 163 gccgatgccggctatggcgaa 183
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>dbj|AK085336.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630013D23 product:hypothetical ARM
           repeat structure containing protein, full insert
           sequence
          Length = 3053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 128 gccgatgccggctatggcgaa 148
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>ref|XM_223075.3| PREDICTED: Rattus norvegicus similar to DKFZP434B168 protein
           (predicted) (LOC289382), mRNA
          Length = 3010

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 473 gccgatgccggctatggcgaa 493
           |||||||||||||||||||||
Sbjct: 137 gccgatgccggctatggcgaa 157
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>emb|X15373.1|MMP400 Mouse cerebellum mRNA for P400 protein
          Length = 9848

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 619  tgatgactatgacagcagtgg 639
            |||||||||||||||||||||
Sbjct: 2776 tgatgactatgacagcagtgg 2796
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>gb|AC159404.1| Trypanosoma brucei chromosome 8 clone RPCI93-10K10, complete sequence
          Length = 182660

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    agtcacaaacagtgacgaag 74
             ||||||||||||||||||||
Sbjct: 74898 agtcacaaacagtgacgaag 74879
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 55      agtcacaaacagtgacgaag 74
               ||||||||||||||||||||
Sbjct: 2083287 agtcacaaacagtgacgaag 2083306
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 56      gtcacaaacagtgacgaagg 75
               ||||||||||||||||||||
Sbjct: 5005066 gtcacaaacagtgacgaagg 5005047
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>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence
          Length = 314335

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    caaggaagactatgaccgca 113
             ||||||||||||||||||||
Sbjct: 12939 caaggaagactatgaccgca 12958
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>gb|AC137681.20| Mus musculus chromosome 14, clone RP23-460H20, complete sequence
          Length = 212261

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tttctctttattttgagatg 22
              ||||||||||||||||||||
Sbjct: 157058 tttctctttattttgagatg 157039
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>ref|XM_817074.1| Trypanosoma brucei TREU927 clone RPCI93-10K10
           kinetoplast-associated protein (Tb927.8.7260) partial
           mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 55  agtcacaaacagtgacgaag 74
           ||||||||||||||||||||
Sbjct: 335 agtcacaaacagtgacgaag 354
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>ref|XM_500844.1| Yarrowia lipolytica CLIB122, YALI0B13530g predicted mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 107  gaccgcagcagcgatgataccggc 130
            ||||||||||| ||||||||||||
Sbjct: 1377 gaccgcagcagtgatgataccggc 1354
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>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone
              BACR07I18, complete sequence
          Length = 159413

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 136    caacaaatccagcaacgacaacaa 159
              |||||| |||||||||||||||||
Sbjct: 104186 caacaactccagcaacgacaacaa 104163
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>gb|AC106783.3| Homo sapiens chromosome 16 clone RP11-347K10, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      atttctctttattttgagat 21
              ||||||||||||||||||||
Sbjct: 107290 atttctctttattttgagat 107271
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>emb|BX842600.1| Neurospora crassa DNA linkage group II BAC clone B15P20
          Length = 74452

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   accaaatctagcaccgatga 270
             ||||||||||||||||||||
Sbjct: 19001 accaaatctagcaccgatga 18982
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>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence
          Length = 141213

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 153  acaacaatgatggtgggtataaga 176
            |||||||||||||||||| |||||
Sbjct: 5056 acaacaatgatggtgggtgtaaga 5033
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>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the
             complete sequence
          Length = 242618

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 136   caacaaatccagcaacgacaacaa 159
             |||||| |||||||||||||||||
Sbjct: 85524 caacaactccagcaacgacaacaa 85501
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     gaccgcagcagcgatgataccggc 130
               ||||||||||| ||||||||||||
Sbjct: 1820165 gaccgcagcagtgatgataccggc 1820188
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>emb|AL365322.10| Mouse DNA sequence from clone RP23-282D4 on chromosome 1, complete
              sequence
          Length = 259487

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    caatggcagtggcagttaca 293
              ||||||||||||||||||||
Sbjct: 138099 caatggcagtggcagttaca 138080
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>dbj|D14400.1|XELIP3R X. laevis mRNA for inositol 1,4,5-trisphosphate receptor, complete
            cds
          Length = 8939

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 620  gatgactatgacagcagtgg 639
            ||||||||||||||||||||
Sbjct: 2552 gatgactatgacagcagtgg 2571


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,816,713
Number of Sequences: 3902068
Number of extensions: 4816713
Number of successful extensions: 93597
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93410
Number of HSP's gapped (non-prelim): 187
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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