>UTR4_YEAST (P32626) Protein UTR4 (Unknown transcript 4 protein)|
          Length = 241

 Score = 53.1 bits (126), Expect = 7e-07
 Identities = 41/118 (34%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
 Frame = +1

Query: 286 VMDIEGTTTPISFVADVLFPYXXXXXXXXXXXTYHTKQTQEDVALLRAQILQDLADG-VP 462
           ++DIEGT  PISFV + LFPY            +  K  Q         + QD  D  V 
Sbjct: 23  LLDIEGTVCPISFVKETLFPY------------FTNKVPQ--------LVQQDTRDSPVS 62

Query: 463 GAVALPPSDDADQDKTIDALVANVQAMIDADRKLTALKQLQGRVWRRGFESGEIKGEV 636
             ++    D+ +Q      L A++  ++  D K   LKQLQG VW  G+ESG+IK  V
Sbjct: 63  NILSQFHIDNKEQ------LQAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPV 114

>HID_DROME (Q24106) Cell death protein W (Protein head involution defective)|
           (Protein wrinkled)
          Length = 410

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 20/53 (37%), Positives = 27/53 (50%)
 Frame = -3

Query: 611 SKPRRHTRPCSCLSAVSFRSASIMACTLATRASMVLSWSASSDGGSATAPGTP 453
           S P  H  P S  S+VS    S  + + A+ +S     SASSDG S+ A  +P
Sbjct: 26  SSPHNHPLPSSASSSVSSSGVSSASASSASSSS-----SASSDGASSAASQSP 73

>SYK_MYCLE (P46861) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 507

 Score = 29.6 bits (65), Expect = 7.9
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +1

Query: 382 TYHTKQTQEDVALLRAQILQDLADGVPGAVALPPSDDADQD 504
           TY T  T +D A++  +I+Q++AD   G   L   DD+  D
Sbjct: 276 TYQTYGTYDDSAVVTREIIQEVADEAIGTRQLQMPDDSVYD 316


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,934,429
Number of Sequences: 219361
Number of extensions: 538735
Number of successful extensions: 2042
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2040
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)