ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62n16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 61398 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 61457 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 61458 cgcgcgacaatgtccgccgccacctggccgccac 61491 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 61679 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 61735 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 37682554 cctacccgcgggccaacgcccccgccca 37682527 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 30118976 ccggcgccggctgctgcttc 30118995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 15780838 ccggcgccggctgctgcttc 15780857
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 59200 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 59259 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 59260 cgcgcgacaatgtccgccgccacctggccgccac 59293 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 59481 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 59537
>dbj|AK119457.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E05, full insert sequence Length = 3112 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 198 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 257 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 258 cgcgcgacaatgtccgccgccacctggccgccac 291
>dbj|AK104517.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C10, full insert sequence Length = 1136 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 240 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 299 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 300 cgcgcgacaatgtccgccgccacctggccgccac 333 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 521 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 577
>dbj|AK104752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F07, full insert sequence Length = 1127 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 236 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 295 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 296 cgcgcgacaatgtccgccgccacctggccgccac 329 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 517 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 573
>dbj|AK104625.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A09, full insert sequence Length = 1127 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 236 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 295 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 296 cgcgcgacaatgtccgccgccacctggccgccac 329 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 517 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 573
>dbj|AK067866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127C12, full insert sequence Length = 1206 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 251 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 310 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 311 cgcgcgacaatgtccgccgccacctggccgccac 344 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 532 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 588
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 9944 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 10003 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 10004 cgcgcgacaatgtccgccgccacctggccgccac 10037 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 10225 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 10281
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/94 (88%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccacccccatctccttcgtcgccgacgtgctcttcccctacg 349 ||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||| Sbjct: 46328 tggacatcgagggcaccacgacgcccatctccttcgtggcggacgtgctcttcccctacg 46387 Query: 350 cgcgggccaacgcccgcgcccacctcgccgccac 383 |||| | ||| | |||| |||||| |||||||| Sbjct: 46388 cgcgcgacaatgtccgccgccacctggccgccac 46421 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 565 acggcgctcaagcagctgcagggccgcgtgtggcggcgcggcttcgagagcggcgag 621 |||||||| |||||||||||||| ||| | |||||||| |||||||| ||||||||| Sbjct: 46609 acggcgctgaagcagctgcaggggcgcatctggcggcggggcttcgacagcggcgag 46665
>gb|BC087697.1| Rattus norvegicus similar to RIKEN cDNA 2310057D15, mRNA (cDNA clone MGC:105720 IMAGE:7312419), complete cds Length = 1710 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 564 cacggcgctcaagcagctgcagggcc 589 |||||||||||||||||||||||||| Sbjct: 407 cacggcgctcaagcagctgcagggcc 432
>ref|NM_001009391.1| Rattus norvegicus similar to RIKEN cDNA 2310057D15 (RGD1309016), mRNA Length = 1710 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 564 cacggcgctcaagcagctgcagggcc 589 |||||||||||||||||||||||||| Sbjct: 407 cacggcgctcaagcagctgcagggcc 432
>emb|CR524276.1| Gallus gallus finished cDNA, clone ChEST35n4 Length = 1184 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 298 gagggcaccaccacccccatctccttcgt 326 ||||||||||||||||||||| ||||||| Sbjct: 39 gagggcaccaccacccccatcgccttcgt 67 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 cacggcgctcaagcagctgcaggg 587 ||||||||| |||||||||||||| Sbjct: 308 cacggcgctgaagcagctgcaggg 331
>emb|CR858645.1| Pongo pygmaeus mRNA; cDNA DKFZp459I2217 (from clone DKFZp459I2217) Length = 2431 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 3 tcatcctgtggcctccacctgcggcttc 30 |||| ||||||||||||||||||||||| Sbjct: 924 tcatgctgtggcctccacctgcggcttc 897
>gb|AC116021.5| Homo sapiens chromosome 11, clone CTD-2589M5, complete sequence Length = 167757 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 8 ctgtggcctccacctgcggcttc 30 ||||||||||||||||||||||| Sbjct: 26829 ctgtggcctccacctgcggcttc 26807
>gb|AY639876.1| Lupinus angustifolius serine/proline-rich repeat protein gene, complete cds Length = 1988 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 caccaccacccccatctccttc 324 |||||||||||||||||||||| Sbjct: 1584 caccaccacccccatctccttc 1605
>ref|NM_141266.1| Drosophila melanogaster CG12173-RA (CG12173), mRNA Length = 819 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccac 311 |||||||||||||||||||||| Sbjct: 86 tggacatcgagggcaccaccac 107
>gb|AC007532.8| Drosophila melanogaster, chromosome 3R, region 82F-82F, BAC clone BACR01D10, complete sequence Length = 171105 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccac 311 |||||||||||||||||||||| Sbjct: 62095 tggacatcgagggcaccaccac 62116
>gb|BT023405.1| Drosophila melanogaster IP01034 full insert cDNA Length = 862 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccac 311 |||||||||||||||||||||| Sbjct: 94 tggacatcgagggcaccaccac 115
>gb|BT022791.1| Drosophila melanogaster IP13511 full insert cDNA Length = 862 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 tggacatcgagggcaccaccac 311 |||||||||||||||||||||| Sbjct: 30 tggacatcgagggcaccaccac 51 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 ggacatcgagggcaccaccac 311 ||||||||||||||||||||| Sbjct: 106 ggacatcgagggcaccaccac 126
>gb|AY209002.1| Lupinus angustifolius serine-proline rich repeat protein mRNA, partial cds Length = 820 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 caccaccacccccatctccttc 324 |||||||||||||||||||||| Sbjct: 489 caccaccacccccatctccttc 510
>gb|AE003603.4| Drosophila melanogaster chromosome 3R, section 5 of 118 of the complete sequence Length = 265289 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 tggacatcgagggcaccaccac 311 |||||||||||||||||||||| Sbjct: 111185 tggacatcgagggcaccaccac 111164
>ref|XM_603916.2| PREDICTED: Bos taurus similar to E-1 enzyme, transcript variant 1 (LOC525563), mRNA Length = 1936 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 553 gaccggaagctcacggcgctcaagcagctgcagggcc 589 ||||||||| |||||| || |||||||||||||||| Sbjct: 510 gaccggaagaccacggcactgaagcagctgcagggcc 546
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gcgcggcttcgagagcggcgagatc 624 ||||||||||||| ||||||||||| Sbjct: 1601060 gcgcggcttcgagcgcggcgagatc 1601036
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gcgcggcttcgagagcggcgagatc 624 ||||||||||||| ||||||||||| Sbjct: 2936404 gcgcggcttcgagcgcggcgagatc 2936380
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 ccgcgcccacctcgccgccac 383 ||||||||||||||||||||| Sbjct: 272243 ccgcgcccacctcgccgccac 272263
>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 171868 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 132839 ggaccagaccatcgacgccctgctggcca 132867
>ref|NM_167921.1| Drosophila melanogaster CG12024-RB, transcript variant B (CG12024), mRNA Length = 1774 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 192 ggaccagaccatcgacgccctgctggcca 220
>ref|NM_139413.2| Drosophila melanogaster CG12024-RA, transcript variant A (CG12024), mRNA Length = 1822 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 192 ggaccagaccatcgacgccctgctggcca 220
>gb|AY070503.1| Drosophila melanogaster GH08896 full length cDNA Length = 1783 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 137 ggaccagaccatcgacgccctgctggcca 165
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 600 gcgcggcttcgagagcggcgagatc 624 ||||||||||||| ||||||||||| Sbjct: 2155594 gcgcggcttcgagcgcggcgagatc 2155570
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 27466800 gcggcggcgtcgcagcagctg 27466780 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21454785 ccggcgccggctgctgcttc 21454804 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21444124 ccggcgccggctgctgcttc 21444143 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21402704 ccggcgccggctgctgcttc 21402723
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 292 gacatcgagggcaccaccaccccca 316 ||||||||||||||||||| ||||| Sbjct: 4724039 gacatcgagggcaccaccagcccca 4724063
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 15018 gcggcggcgtcgcagcagctg 15038
>dbj|AK122084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122D07, full insert sequence Length = 2444 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 329 gcggcggcgtcgcagcagctg 309
>dbj|AK065168.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C15, full insert sequence Length = 2933 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 372 gcggcggcgtcgcagcagctg 352
>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete sequence Length = 315108 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 19529 ggaccagaccatcgacgccctgctggcca 19557
>gb|AC005557.1|AC005557 Drosophila melanogaster, chromosome 3L, region 62A10-62B5, P1 clones DS02777, DS03222, DS02345, and DS04808, complete sequence Length = 257867 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ggacaagaccatcgacgccctggtggcca 529 |||| ||||||||||||||||| |||||| Sbjct: 245827 ggaccagaccatcgacgccctgctggcca 245855
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 27392400 gcggcggcgtcgcagcagctg 27392380 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21383106 ccggcgccggctgctgcttc 21383125 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21372445 ccggcgccggctgctgcttc 21372464 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21331025 ccggcgccggctgctgcttc 21331044
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 gcggcggcgtcgcagcagctg 244 ||||||||||||||||||||| Sbjct: 42714 gcggcggcgtcgcagcagctg 42694
>emb|AL773525.5| Mouse DNA sequence from clone RP23-169L4 on chromosome 2, complete sequence Length = 188772 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 caccaccacccccatctcctt 323 ||||||||||||||||||||| Sbjct: 155647 caccaccacccccatctcctt 155627
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 190042 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cataccacaccaaacagacccaagaaga 410 |||| ||||||| ||||||||||||||| Sbjct: 94740 cataacacaccacacagacccaagaaga 94767
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 561 gctcacggcgctcaagcagc 580 |||||||||||||||||||| Sbjct: 2745475 gctcacggcgctcaagcagc 2745456
>ref|NM_193898.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2760 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 384 ccggcgccggctgctgcttc 403
>ref|NM_190781.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1152 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 50 cctacccgcgggccaacgcccccgccca 77
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 83744 ccggcgccggctgctgcttc 83763
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 cggcttcgagagcggcgaga 622 |||||||||||||||||||| Sbjct: 1953717 cggcttcgagagcggcgaga 1953736
>ref|XM_420559.1| PREDICTED: Gallus gallus similar to E-1 enzyme (LOC422600), mRNA Length = 812 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 564 cacggcgctcaagcagctgcaggg 587 ||||||||| |||||||||||||| Sbjct: 249 cacggcgctgaagcagctgcaggg 272
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 46020 ccggcgccggctgctgcttc 46001
>gb|AY659174.1| Synthetic construct Peudomonas aeruginosa clone FLH036934.01F PA0536 gene, partial cds Length = 1026 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcttcttcggctccggcg 46 |||||||||||||||||||| Sbjct: 618 cttcttcttcggctccggcg 599
>gb|BC067713.1| Danio rerio sp1 transcription factor, mRNA (cDNA clone MGC:85950 IMAGE:6964991), complete cds Length = 2262 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcagggggttcagcagggcg 135 |||||||||||||||||||| Sbjct: 843 gcagggggttcagcagggcg 862
>ref|XM_957299.1| Neurospora crassa OR74A hypothetical protein (NCU06358.1) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ccacccccatctccttcgtcgccg 331 ||||||||||||| |||||||||| Sbjct: 812 ccacccccatctctttcgtcgccg 835
>ref|XM_326212.1| Neurospora crassa OR74A hypothetical protein (NCU06358.1) partial mRNA Length = 1584 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 ccacccccatctccttcgtcgccg 331 ||||||||||||| |||||||||| Sbjct: 812 ccacccccatctctttcgtcgccg 835
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 141204 ccggcgccggctgctgcttc 141185
>ref|XM_387252.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07076.1) partial mRNA Length = 3288 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 gcctccacctgcggcttcttcttc 36 ||||||||||| |||||||||||| Sbjct: 3245 gcctccacctgtggcttcttcttc 3222
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cggcttcttcttcggctccggcgccggc 51 |||||||||| |||||||||||||||| Sbjct: 37422 cggcttcttcgccggctccggcgccggc 37395
>emb|AL137857.29| Human DNA sequence from clone RP5-1166H10 on chromosome 1p33-35.1 Contains the MATN1 gene for matrilin 1 cartilage matrix protein, a novel gene (FLJ46197, FLJ33163), the 3' end of the gene for Lysosomal-associated multispanning membrane protein-5 (LAPTM5) and a CpG island, complete sequence Length = 152042 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ccaccacccccatctccttc 324 |||||||||||||||||||| Sbjct: 137851 ccaccacccccatctccttc 137870
>ref|XM_966525.1| PREDICTED: Tribolium castaneum similar to CG11071-PA (LOC660282), mRNA Length = 1110 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 489 cgacgccgaccaggacaagaccatcgac 516 |||||||||||||||| | ||||||||| Sbjct: 705 cgacgccgaccaggacgacaccatcgac 732
>ref|XM_968253.1| PREDICTED: Tribolium castaneum similar to CG10627-PA (LOC662136), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 atcgacgccctggtggccaa 530 |||||||||||||||||||| Sbjct: 1462 atcgacgccctggtggccaa 1481
>gb|AC182012.3| Otolemur garnettii clone CH256-376P14, complete sequence Length = 224337 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ggccaacgcccgcgcccacc 373 |||||||||||||||||||| Sbjct: 206542 ggccaacgcccgcgcccacc 206523
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gcggcttcgagagcggcgag 621 |||||||||||||||||||| Sbjct: 236688 gcggcttcgagagcggcgag 236669
>emb|AL606667.5|OSJN00082 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C06, complete sequence Length = 160129 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcttcttcggctccggcg 46 |||||||||||||||||||| Sbjct: 94742 cttcttcttcggctccggcg 94723
>emb|AJ300302.1|SGR300302 Streptomyces griseus partial ORF1, canA gene, canC gene, canF gene, canT gene, canRA gene and canRB gene Length = 39314 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cggcttcttcttcggctccggcgccggc 51 |||||||||| |||||||||||||||| Sbjct: 31937 cggcttcttcgccggctccggcgccggc 31910
>emb|AL662900.12| Mouse DNA sequence from clone RP23-413L24 on chromosome 11 Contains a CpG island, complete sequence Length = 190156 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 caccaaacagacccaagaag 409 |||||||||||||||||||| Sbjct: 48760 caccaaacagacccaagaag 48779
>gb|AC100814.2| Homo sapiens chromosome 8, clone CTD-3025N20, complete sequence Length = 169537 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 caccaccacccccatctcct 322 |||||||||||||||||||| Sbjct: 125686 caccaccacccccatctcct 125705
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcacctccggctccagcggc 117 |||||||||||||||||||| Sbjct: 546458 gcacctccggctccagcggc 546439
>dbj|AK128076.1| Homo sapiens cDNA FLJ46197 fis, clone TESTI4007565 Length = 4281 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ccaccacccccatctccttc 324 |||||||||||||||||||| Sbjct: 2149 ccaccacccccatctccttc 2168
>gb|AE005989.1| Caulobacter crescentus CB15 section 315 of 359 of the complete genome Length = 10128 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 cggcttcgagagcggcgaga 622 |||||||||||||||||||| Sbjct: 5318 cggcttcgagagcggcgaga 5299
>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete sequence Length = 158550 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 29088 ccggcgccggctgctgcttc 29069
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 atggacatcgagggcaccac 308 |||||||||||||||||||| Sbjct: 203714 atggacatcgagggcaccac 203695
>gb|AC174742.8| Mus musculus BAC RP24-258O12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163118 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cataccacaccaaacagacccaagaaga 410 |||| ||||||| ||||||||||||||| Sbjct: 112171 cataacacaccacacagacccaagaaga 112198
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcggcagggggttcagcagg 132 |||||||||||||||||||| Sbjct: 47325 gcggcagggggttcagcagg 47306
>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20, complete sequence Length = 151560 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 taccacaccaaacagacccaagaa 408 ||||||||||||||||| |||||| Sbjct: 107460 taccacaccaaacagacacaagaa 107483
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cttcttcttcggctccggcg 46 |||||||||||||||||||| Sbjct: 6673786 cttcttcttcggctccggcg 6673767
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 17209141 ccggcgccggctgctgcttc 17209160
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21035303 ccggcgccggctgctgcttc 21035322
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cggcttcttcttcggctccggcgccggc 51 ||||||| |||||||| ||||||||||| Sbjct: 18886922 cggcttcgtcttcggcgccggcgccggc 18886895
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 7956429 ccggcgccggctgctgcttc 7956410
>ref|NM_212662.1| Danio rerio sp1 transcription factor (sp1), mRNA Length = 2262 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcagggggttcagcagggcg 135 |||||||||||||||||||| Sbjct: 843 gcagggggttcagcagggcg 862
>dbj|AP003536.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1096D03 Length = 184422 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 8507 ccggcgccggctgctgcttc 8526
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 23798 ccggcgccggctgctgcttc 23817
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 114966 ccggcgccggctgctgcttc 114985
>gb|AE004490.1| Pseudomonas aeruginosa PAO1, section 51 of 529 of the complete genome Length = 11445 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cttcttcttcggctccggcg 46 |||||||||||||||||||| Sbjct: 4825 cttcttcttcggctccggcg 4844
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 513 cgacgccctggtggccaacgtgcaggcc 540 |||||| ||||||||| ||||||||||| Sbjct: 372293 cgacgcgctggtggccgacgtgcaggcc 372266
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 143028 cctacccgcgggccaacgcccccgccca 143001
>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039A07 Length = 148892 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 10855 cctacccgcgggccaacgcccccgccca 10828
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 24 cggcttcttcttcggctccggcgccggc 51 ||||||| |||||||| ||||||||||| Sbjct: 52487 cggcttcgtcttcggcgccggcgccggc 52460
>dbj|AP004359.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150E06 Length = 129680 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 87927 ccggcgccggctgctgcttc 87946
>emb|X72087.1|ADVRR Aujeszky's disease virus RR1 and RR2 genes Length = 4080 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcggcagggggttcagcagg 132 |||||||||||||||||||| Sbjct: 1387 gcggcagggggttcagcagg 1368
>dbj|AK122139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136E13, full insert sequence Length = 2994 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 148 ccggcgccggctgctgcttc 167
>dbj|AK106718.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-G03, full insert sequence Length = 1841 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 145 cctacccgcgggccaacgcccccgccca 172
>dbj|AK070435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054D19, full insert sequence Length = 1245 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 344 cctacgcgcgggccaacgcccgcgccca 371 ||||| ||||||||||||||| |||||| Sbjct: 149 cctacccgcgggccaacgcccccgccca 176
>emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in linkage group 20, complete sequence Length = 176396 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 385 taccacaccaaacagacccaagaa 408 ||||||||||||||||| |||||| Sbjct: 81739 taccacaccaaacagacacaagaa 81762
>emb|AJ893535.1| Ochotona princeps partial ar gene for androgen receptor, exon 1 Length = 1404 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 ctccggcgccggctgctgct 58 |||||||||||||||||||| Sbjct: 120 ctccggcgccggctgctgct 101
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 486 cgacgacgccgaccaggacaagaccatc 513 |||||||||||||| ||||||| ||||| Sbjct: 1811407 cgacgacgccgacctggacaaggccatc 1811434
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 21046567 ccggcgccggctgctgcttc 21046586
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ccggcgccggctgctgcttc 60 |||||||||||||||||||| Sbjct: 17304327 ccggcgccggctgctgcttc 17304346
>emb|AJ318065.1|PVI318065 Pseudorabies virus ul39 gene (partial), ul36 gene, ul37 gene and ul38 gene (partial) Length = 6126 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gcggcagggggttcagcagg 132 |||||||||||||||||||| Sbjct: 245 gcggcagggggttcagcagg 264
>emb|X80797.1|PVPCA Pseudorabies Virus genomic DNA Length = 5657 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcggcagggggttcagcagg 132 |||||||||||||||||||| Sbjct: 2964 gcggcagggggttcagcagg 2945
>gb|AC172027.4| Mus musculus BAC RP24-219P17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 185679 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cataccacaccaaacagacccaagaaga 410 |||| ||||||| ||||||||||||||| Sbjct: 162292 cataacacaccacacagacccaagaaga 162319 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cataccacaccaaacagacccaagaaga 410 |||| ||||||| ||||||||||||||| Sbjct: 3200 cataacacaccacacagacccaagaaga 3227
>gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 211697 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cataccacaccaaacagacccaagaaga 410 |||| ||||||| ||||||||||||||| Sbjct: 47692 cataacacaccacacagacccaagaaga 47719
>gb|U11693.1|ASU11693 Avena sativa victorin binding protein mRNA, complete cds Length = 3408 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 tggcctccacctgcggcttc 30 |||||||||||||||||||| Sbjct: 327 tggcctccacctgcggcttc 346 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,873,375 Number of Sequences: 3902068 Number of extensions: 4873375 Number of successful extensions: 116386 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113399 Number of HSP's gapped (non-prelim): 2987 length of query: 643 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 620 effective length of database: 17,143,297,704 effective search space: 10628844576480 effective search space used: 10628844576480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
