>AMER1_MOUSE (Q9JHT5) AMME syndrome candidate gene 1 protein homolog|
          Length = 344

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -1

Query: 562 GFGSSGVQLRGVKAKLLSTSGTRGNGGGDLATARQRCGHGGERG 431
           G G +G +L G+    LS  G  G GGG   +  Q CG GG  G
Sbjct: 45  GLGGAGTRLNGLGG--LSGGGGSGGGGGCPLSPPQGCGGGGGGG 86

>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid|
           protein-binding protein 1) (APP-BP1)
          Length = 533

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +1

Query: 52  MTLCIISLLIYYHLSKNNSNIYFMAHLLVYMKKMHAEYAFLGRD-LQHE*NVTSYPFVPC 228
           + LC+ SLL  Y L+ N  + Y          + H   AFLG    Q    + ++ FVP 
Sbjct: 456 LKLCVNSLLQEYSLNVNVKDDYIHEFCRYGAAEPHTVAAFLGGSAAQEAIKIITHQFVPF 515

Query: 229 THSLIYQLFS 258
            ++ +Y   S
Sbjct: 516 NNTFLYNAMS 525

>HPAP_RALSO (P35651) HRP-associated protein|
          Length = 197

 Score = 29.6 bits (65), Expect = 6.3
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +3

Query: 420 RNYSPLSPPWPHLCLAVARSPPPFPLVPEVLSSFALTPRSCTPEEPKP 563
           R  +PL  P PH  L     PPP P  PE +      PR  TP    P
Sbjct: 20  RRRTPLRTPGPHDALPYV--PPPRPEPPEPVEDDFPEPRQDTPASDPP 65

>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +3

Query: 432 PLSPPWPHLCLAVARSPPPFPLVPEVLSSFALTPRSCTPEEPKP 563
           P  PP P      A SP P P  P       + P +C P  PKP
Sbjct: 89  PSPPPKPQPKPPPAPSPSPCPSPPPKPQPKPVPPPACPPTPPKP 132

>K2C1B_HUMAN (Q7Z794) Keratin, type II cytoskeletal 1b|
          Length = 576

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
 Frame = -1

Query: 553 SSGVQLRGVKAKLLSTSGTRGNGGGDLAT-----ARQRCGHGG 440
           SS      +  ++ STS + G+GGG  A      AR RCG GG
Sbjct: 6   SSQSAFSSMSRRVYSTSSSAGSGGGSPAVGSVCYARGRCGGGG 48

>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)|
          Length = 1663

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
 Frame = +2

Query: 152 CMRSMLSWGEIYNMSEMLRVTPLCHAPTA*YTSCFLCSFILLDEHNRLLTYEKKLSSC-- 325
           C+R +LS     N ++    TPLC A    +  C             L++Y+  ++    
Sbjct: 759 CVRLLLSAEAQVNAADKNGFTPLCAAAAQGHFECV----------ELLISYDANINHAAD 808

Query: 326 DVDVPLMLMCKNI*RKNPECCQLIM 400
               PL L CKN    N EC +L++
Sbjct: 809 GGQTPLYLACKN---GNKECIKLLL 830

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 29.3 bits (64), Expect = 8.2
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +3

Query: 432 PLSPPWPHLCLAVARSP---PPFPLVPEVLSSFALTPRSCTPEEPKP 563
           P  PP P      A +P   PP P  P+     A TP  C P+ PKP
Sbjct: 6   PKPPPKPQPKPPPAPTPSPCPPQPPKPQPKPPPAPTPSPCPPQPPKP 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,851,334
Number of Sequences: 219361
Number of extensions: 1692679
Number of successful extensions: 4791
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4770
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4757699440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)