ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63c13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR407588.11| Zebrafish DNA sequence from clone DKEY-190L8 in... 46 0.13
2emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 i... 46 0.13
3ref|XM_720785.1| Plasmodium yoelii yoelii str. 17XNL vacuolar pr... 46 0.13
4emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 46 0.13
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
6emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in ... 46 0.13
7gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Can... 44 0.50
8emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 44 0.50
9emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 ... 44 0.50
10gb|AC167666.4| Culex pipiens quinquefasciatus, clone Culex pipie... 42 2.0
11gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.0
12ref|XM_567214.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 2.0
13gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosom... 42 2.0
14gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete... 42 2.0
15ref|XM_727278.1| Plasmodium chabaudi chabaudi ubiquitin carboxyl... 42 2.0
16ref|XM_672565.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.0
17emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro... 42 2.0
18emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in... 42 2.0
19gb|AC008173.2| Homo sapiens BAC clone RP11-374F15 from 2, comple... 42 2.0
20gb|AC109513.14| Homo sapiens chromosome 15, clone RP11-893E1, co... 42 2.0
21gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosom... 42 2.0
22gb|AC013489.17| Homo sapiens chromosome 15, clone RP11-97O12, co... 42 2.0
23gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 7.8
24gb|AY360384.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
25gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, com... 40 7.8
26gb|AC142111.3| Mus musculus BAC clone RP24-63G9 from chromosome ... 40 7.8
27gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
28gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
29gb|AC153007.4| Mus musculus BAC clone RP24-266E2 from chromosome... 40 7.8
30gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequ... 40 7.8
31gb|AC132340.3| Mus musculus BAC clone RP24-166O10 from chromosom... 40 7.8
32gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosom... 40 7.8
33gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosom... 40 7.8
34gb|AC124485.3| Mus musculus BAC clone RP23-450J12 from chromosom... 40 7.8
35gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, compl... 40 7.8
36gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, co... 40 7.8
37gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosom... 40 7.8
38emb|AL731543.9| Human DNA sequence from clone RP11-318C4 on chro... 40 7.8
39emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on ch... 40 7.8
40emb|AL078634.24|HS1049G11 Human DNA sequence from clone RP5-1049... 40 7.8
41gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Ca... 40 7.8
42dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 7.8
43gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, comple... 40 7.8
44gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complet... 40 7.8
45gb|AC093606.3| Homo sapiens BAC clone RP11-648B12 from 4, comple... 40 7.8
46emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in ... 40 7.8
47emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in ... 40 7.8
48dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
50gb|AC026325.17| Homo sapiens 3 BAC RP11-335L9 (Roswell Park Canc... 40 7.8
51dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
52dbj|AP005407.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
53dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
54dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
55dbj|AB100603.1| Mus musculus Notch1 gene for transmembrane recep... 40 7.8
56gb|AC154771.2| Mus musculus BAC clone RP24-448F8 from 13, comple... 40 7.8
57gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, compl... 40 7.8
58gb|AC006287.1|AC006287 Homo sapiens, clone hRPK.22_A_1, complete... 40 7.8
59emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in ... 40 7.8
60emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 i... 40 7.8
61dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss... 40 7.8
62emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chr... 40 7.8
63emb|AL732541.11| Mouse DNA sequence from clone RP23-306D20 on ch... 40 7.8 
>emb|CR407588.11| Zebrafish DNA sequence from clone DKEY-190L8 in linkage group 17,
              complete sequence
          Length = 154439

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 97     aaaaacaactcaaatatttactt 119
              |||||||||||||||||||||||
Sbjct: 139890 aaaaacaactcaaatatttactt 139912
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>emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 in linkage group 17,
            complete sequence
          Length = 147890

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 97   aaaaacaactcaaatatttactt 119
            |||||||||||||||||||||||
Sbjct: 5660 aaaaacaactcaaatatttactt 5682
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>ref|XM_720785.1| Plasmodium yoelii yoelii str. 17XNL vacuolar proton translocating
            ATPase 116 kDa subunit a isoform 1 (PY05420) partial mRNA
          Length = 2844

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 391  attaatcatgataataaattttatgaa 417
            |||||||| ||||||||||||||||||
Sbjct: 2020 attaatcaagataataaattttatgaa 2046
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 429   tctcccctctctcccccatggcc 451
             |||||||||||||||||||||||
Sbjct: 94312 tctcccctctctcccccatggcc 94290
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 429      tctcccctctctcccccatggcc 451
                |||||||||||||||||||||||
Sbjct: 20363679 tctcccctctctcccccatggcc 20363657
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>emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in linkage group 17, complete
              sequence
          Length = 236557

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 97     aaaaacaactcaaatatttactt 119
              |||||||||||||||||||||||
Sbjct: 139998 aaaaacaactcaaatatttactt 139976
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>gb|AC023503.23| Homo sapiens 3 BAC RP11-217I10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 160370

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 239  tgatataccagttgttttcttt 260
            ||||||||||||||||||||||
Sbjct: 3209 tgatataccagttgttttcttt 3188
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 255     ttctttgcagcttcatcctgct 276
               ||||||||||||||||||||||
Sbjct: 1201721 ttctttgcagcttcatcctgct 1201700
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>emb|CR388073.11| Zebrafish DNA sequence from clone CH211-197K16 in linkage group 25,
              complete sequence
          Length = 131786

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 391    attaatcatgataataaatttt 412
              ||||||||||||||||||||||
Sbjct: 108244 attaatcatgataataaatttt 108265
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>gb|AC167666.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940120D9, complete sequence
          Length = 115819

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 264   gcttcatcctgctggacgagc 284
             |||||||||||||||||||||
Sbjct: 22767 gcttcatcctgctggacgagc 22787
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>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
               sequence
          Length = 2300533

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 427     attctcccctctctcccccat 447
               |||||||||||||||||||||
Sbjct: 1703756 attctcccctctctcccccat 1703736
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>ref|XM_567214.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNA06260) partial mRNA
          Length = 2636

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 427 attctcccctctctcccccat 447
           |||||||||||||||||||||
Sbjct: 636 attctcccctctctcccccat 656
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>gb|AC126935.3| Mus musculus BAC clone RP24-186K24 from chromosome 1, complete sequence
          Length = 197488

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   agttgtgatgtagatgtacca 340
             |||||||||||||||||||||
Sbjct: 72068 agttgtgatgtagatgtacca 72048
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>gb|AC117188.3| Mus musculus BAC clone RP23-42E3 from 1, complete sequence
          Length = 226443

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 320  agttgtgatgtagatgtacca 340
            |||||||||||||||||||||
Sbjct: 3318 agttgtgatgtagatgtacca 3338
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>ref|XM_727278.1| Plasmodium chabaudi chabaudi ubiquitin carboxyl-terminal hydrolase
           a (PC300010.00.0) partial mRNA
          Length = 567

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 399 tgataataaattttatgaatacgaa 423
           |||||||||| ||||||||||||||
Sbjct: 99  tgataataaagtttatgaatacgaa 123
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>ref|XM_672565.1| Plasmodium berghei strain ANKA hypothetical protein (PB001505.02.0)
           partial mRNA
          Length = 1764

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 atgataataaattttatgaat 418
           |||||||||||||||||||||
Sbjct: 596 atgataataaattttatgaat 616
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>emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
              Rabep1 gene for rabaptin, RAB GTPase binding effector
              protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
              ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
              for nucleoporin 88, four novel genes, the C1qbp gene for
              complement component 1 q subcomponent binding protein, the
              Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a
               novel pseudogene, a CARD domain pseudogene and six CpG
              islands, complete sequence
          Length = 254116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 370    taaaaatccagaatgttgtca 390
              |||||||||||||||||||||
Sbjct: 211720 taaaaatccagaatgttgtca 211700
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>emb|BX663607.13| Zebrafish DNA sequence from clone DKEY-30P18 in linkage group 6, complete
              sequence
          Length = 216068

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    gataataaattttatgaatac 420
              |||||||||||||||||||||
Sbjct: 178722 gataataaattttatgaatac 178702
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>gb|AC008173.2| Homo sapiens BAC clone RP11-374F15 from 2, complete sequence
          Length = 193893

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 398    atgataataaattttatgaat 418
              |||||||||||||||||||||
Sbjct: 169296 atgataataaattttatgaat 169276
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>gb|AC109513.14| Homo sapiens chromosome 15, clone RP11-893E1, complete sequence
          Length = 93684

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 104   actcaaatatttactttatgg 124
             |||||||||||||||||||||
Sbjct: 34296 actcaaatatttactttatgg 34316
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>gb|AC174648.2| Mus musculus BAC clone CH36-236I19 from chromosome 1, complete sequence
          Length = 202877

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   agttgtgatgtagatgtacca 340
             |||||||||||||||||||||
Sbjct: 15061 agttgtgatgtagatgtacca 15041
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>gb|AC013489.17| Homo sapiens chromosome 15, clone RP11-97O12, complete sequence
          Length = 175836

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 104    actcaaatatttactttatgg 124
              |||||||||||||||||||||
Sbjct: 140244 actcaaatatttactttatgg 140224
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 82      tattatcatttgtcaaaaaa 101
               ||||||||||||||||||||
Sbjct: 1247150 tattatcatttgtcaaaaaa 1247131
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>gb|AY360384.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0079I01,
              complete sequence
          Length = 178920

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 235    agcctgatataccagttgttttctttgc 262
              ||||||||  ||||||||||||||||||
Sbjct: 136112 agcctgatcaaccagttgttttctttgc 136139
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>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 106    tcaaatatttactttatggcacat 129
              ||||||||||||||||||| ||||
Sbjct: 131826 tcaaatatttactttatggtacat 131803
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>gb|AC142111.3| Mus musculus BAC clone RP24-63G9 from chromosome 9, complete sequence
          Length = 185361

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atattatcatttgtcaaaaa 100
             ||||||||||||||||||||
Sbjct: 13238 atattatcatttgtcaaaaa 13257
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>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0008E07, complete sequence
          Length = 146679

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 236   gcctgatataccagttgttttctttgca 263
             |||||||  |||||||||||||||||||
Sbjct: 43621 gcctgatcaaccagttgttttctttgca 43594
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>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 236    gcctgatataccagttgttttctttgca 263
              |||||||  |||||||||||||||||||
Sbjct: 153255 gcctgatcaaccagttgttttctttgca 153228
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>gb|AC153007.4| Mus musculus BAC clone RP24-266E2 from chromosome 8, complete sequence
          Length = 174101

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     cattgttaatatattatcat 90
              ||||||||||||||||||||
Sbjct: 119601 cattgttaatatattatcat 119582
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>gb|AC136965.2| Canis familiaris clone RP81-213K20, complete sequence
          Length = 157884

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 432   cccctctctcccccatggccgcacctttgcct 463
             |||||||||||||||||||  ||||| |||||
Sbjct: 67599 cccctctctcccccatggcatcacctctgcct 67568
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>gb|AC132340.3| Mus musculus BAC clone RP24-166O10 from chromosome 1, complete sequence
          Length = 146111

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   ttctcccctctctcccccat 447
             ||||||||||||||||||||
Sbjct: 69047 ttctcccctctctcccccat 69028
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>gb|AC127318.4| Mus musculus BAC clone RP23-228J12 from chromosome 9, complete sequence
          Length = 168789

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     atattatcatttgtcaaaaa 100
              ||||||||||||||||||||
Sbjct: 136415 atattatcatttgtcaaaaa 136434
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>gb|AC132411.3| Mus musculus BAC clone RP23-352O24 from chromosome 1, complete sequence
          Length = 181902

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    ttgtgccatgcacccacagc 237
              ||||||||||||||||||||
Sbjct: 121926 ttgtgccatgcacccacagc 121945
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>gb|AC124485.3| Mus musculus BAC clone RP23-450J12 from chromosome 8, complete sequence
          Length = 198254

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     cattgttaatatattatcat 90
              ||||||||||||||||||||
Sbjct: 101569 cattgttaatatattatcat 101550
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>gb|AC124565.2| Mus musculus BAC clone RP23-143I23 from 16, complete sequence
          Length = 177251

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   actgatgttaatgtgtaaaa 359
             ||||||||||||||||||||
Sbjct: 61741 actgatgttaatgtgtaaaa 61722
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>gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, complete sequence
          Length = 232454

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    attgttaatatattatcatt 91
             ||||||||||||||||||||
Sbjct: 81284 attgttaatatattatcatt 81265
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>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete
            sequence
          Length = 199388

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 213  cccctttgtgccatgcacccacagcctg 240
            |||||||||||||||||| |||| ||||
Sbjct: 9376 cccctttgtgccatgcacacacaacctg 9349
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>emb|AL731543.9| Human DNA sequence from clone RP11-318C4 on chromosome 10 Contains the
             gene for a novel protein and the 5' end of a deleted in
             malignant brain tumors 1 (DMBT1) pseudogene, complete
             sequence
          Length = 118510

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   aaaacatttgacgtaaaaat 376
             ||||||||||||||||||||
Sbjct: 75357 aaaacatttgacgtaaaaat 75376
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>emb|AL356454.15| Human DNA sequence from clone RP11-458J24 on chromosome 6, complete
              sequence
          Length = 174333

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     gttaatatattatcatttgt 94
              ||||||||||||||||||||
Sbjct: 164379 gttaatatattatcatttgt 164398
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>emb|AL078634.24|HS1049G11 Human DNA sequence from clone RP5-1049G11 on chromosome 20p11.1-11.23
             Contains part of the KIAA1272 gene for a protein similar
             to rat tulip proteins 1 and 2, the 5' part of the gene for
             a novel protein similar to eukaryotic translation
             initiation factor 4E-like 4 and part of a novel protein
             similar to fly CG552, complete sequence
          Length = 136168

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   ttaatgtgtaaaaacatttg 366
             ||||||||||||||||||||
Sbjct: 60754 ttaatgtgtaaaaacatttg 60773
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>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180064

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    aatcatgataataaatttta 413
              ||||||||||||||||||||
Sbjct: 171745 aatcatgataataaatttta 171764
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     cttcatcctgctggacgagc 284
               ||||||||||||||||||||
Sbjct: 4347685 cttcatcctgctggacgagc 4347704
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>gb|AC096755.2| Homo sapiens BAC clone RP11-519M16 from 4, complete sequence
          Length = 182440

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     tgtcaaaaaacaactcaaat 111
              ||||||||||||||||||||
Sbjct: 114513 tgtcaaaaaacaactcaaat 114494
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>gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complete sequence
          Length = 158901

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 425  ttattctcccctctctcccc 444
            ||||||||||||||||||||
Sbjct: 8006 ttattctcccctctctcccc 7987
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>gb|AC093606.3| Homo sapiens BAC clone RP11-648B12 from 4, complete sequence
          Length = 48065

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   atcatgataataaattttat 414
             ||||||||||||||||||||
Sbjct: 22931 atcatgataataaattttat 22950
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>emb|BX649630.9| Zebrafish DNA sequence from clone DKEY-125B7 in linkage group 21,
              complete sequence
          Length = 124133

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     aatatattatcatttgtcaaaaaa 101
              |||||||||| |||||||||||||
Sbjct: 120487 aatatattattatttgtcaaaaaa 120464
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>emb|BX323053.6| Zebrafish DNA sequence from clone DKEYP-53E9 in linkage group 12,
             complete sequence
          Length = 92153

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    ttaatatattatcatttgtcaaaaaaca 103
             |||||| |||||||||||| ||||||||
Sbjct: 46864 ttaataaattatcatttgttaaaaaaca 46837
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 235      agcctgatataccagttgttttctttgc 262
                ||||||||  ||||||||||||||||||
Sbjct: 13567360 agcctgatcaaccagttgttttctttgc 13567333



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 346     gttaatgtgtaaaaacattt 365
               ||||||||||||||||||||
Sbjct: 1987032 gttaatgtgtaaaaacattt 1987051
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 236      gcctgatataccagttgttttctttgca 263
                |||||||  |||||||||||||||||||
Sbjct: 12276143 gcctgatcaaccagttgttttctttgca 12276116
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>gb|AC026325.17| Homo sapiens 3 BAC RP11-335L9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162104

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 352   gtgtaaaaacatttgacgtaaaaa 375
             |||||||||| |||||||||||||
Sbjct: 92770 gtgtaaaaacttttgacgtaaaaa 92793
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>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0451H06
          Length = 136473

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 235    agcctgatataccagttgttttctttgc 262
              ||||||||  ||||||||||||||||||
Sbjct: 105674 agcctgatcaaccagttgttttctttgc 105647
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>dbj|AP005407.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0019N02
          Length = 152373

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 235   agcctgatataccagttgttttctttgc 262
             ||||||||  ||||||||||||||||||
Sbjct: 24806 agcctgatcaaccagttgttttctttgc 24779
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    gttaatgtgtaaaaacattt 365
              ||||||||||||||||||||
Sbjct: 112230 gttaatgtgtaaaaacattt 112249
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>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0509D04
          Length = 140666

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    gttaatgtgtaaaaacattt 365
              ||||||||||||||||||||
Sbjct: 136067 gttaatgtgtaaaaacattt 136086
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>dbj|AB100603.1| Mus musculus Notch1 gene for transmembrane receptor Notch1, complete
             cds
          Length = 60667

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   tctcccctctctcccccatg 448
             ||||||||||||||||||||
Sbjct: 53915 tctcccctctctcccccatg 53934
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>gb|AC154771.2| Mus musculus BAC clone RP24-448F8 from 13, complete sequence
          Length = 165376

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   catgataataaattttatga 416
             ||||||||||||||||||||
Sbjct: 94124 catgataataaattttatga 94143
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>gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, complete sequence
          Length = 170268

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 213   cccctttgtgccatgcacccacagcctg 240
             |||||||||||||||||| |||| ||||
Sbjct: 98508 cccctttgtgccatgcacacacaacctg 98481
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>gb|AC006287.1|AC006287 Homo sapiens, clone hRPK.22_A_1, complete sequence
          Length = 176153

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   ctcaaatatttactttatgg 124
             ||||||||||||||||||||
Sbjct: 11417 ctcaaatatttactttatgg 11436
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>emb|CR456684.10| Zebrafish DNA sequence from clone DKEY-46I8 in linkage group 12,
             complete sequence
          Length = 262809

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 76    ttaatatattatcatttgtcaaaaaaca 103
             |||||| |||||||||||| ||||||||
Sbjct: 50501 ttaataaattatcatttgttaaaaaaca 50474
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>emb|BX005111.4| Zebrafish DNA sequence from clone CH211-273E17 in linkage group 21,
             complete sequence
          Length = 169747

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 78    aatatattatcatttgtcaaaaaa 101
             |||||||||| |||||||||||||
Sbjct: 56645 aatatattattatttgtcaaaaaa 56668
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>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aaaaacaactcaaatattta 116
              ||||||||||||||||||||
Sbjct: 556844 aaaaacaactcaaatattta 556825
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>emb|AL807248.7| Mouse DNA sequence from clone RP23-400M20 on chromosome X, complete
             sequence
          Length = 190178

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    atattatcatttgtcaaaaa 100
             ||||||||||||||||||||
Sbjct: 53047 atattatcatttgtcaaaaa 53066
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>emb|AL732541.11| Mouse DNA sequence from clone RP23-306D20 on chromosome 2, complete
             sequence
          Length = 213918

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   tctcccctctctcccccatg 448
             ||||||||||||||||||||
Sbjct: 63582 tctcccctctctcccccatg 63601


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,003,713
Number of Sequences: 3902068
Number of extensions: 6003713
Number of successful extensions: 154222
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153664
Number of HSP's gapped (non-prelim): 558
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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