ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62n11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009271.1| Triticum aestivum clone wlk8.pk0009.f9:fis, full insert mRNA sequence Length = 1301 Score = 1072 bits (541), Expect = 0.0 Identities = 572/581 (98%), Gaps = 1/581 (0%) Strand = Plus / Plus Query: 44 tggcgttgtcgaacggctccggtggcgactccaaggccgagttcgcggaaatatacagca 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tggcgttgtcgaacggctccggtggcgactccaaggccgagttcgcggaaatatacagca 124 Query: 104 ggctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagt 163 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 125 ggctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtcgctccagt 184 Query: 164 ggatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctg 223 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185 ggatcgagcgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctg 244 Query: 224 tcattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttc 283 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 245 tcatcgatagctacaagacattgaaaggtgtagatgttttgaggaaggaggagacgtttc 304 Query: 284 ttgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatg 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 305 ttgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatg 364 Query: 344 atatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcagg 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 atatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcagg 424 Query: 404 ttggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttc 463 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 425 ttggccttattgctgtaaacgacgggattatccttcgcaaccatatttcacggatccttc 484 Query: 464 aacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttg 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 aacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttg 544 Query: 524 agttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagg 583 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 aattcaagacggcttcagggcagttgttggatcttatcactactcacgagggagaaaagg 604 Query: 584 atctcacaaaatataacttggaatgttcaccggcgcattgt 624 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 605 atctcacaaaatataactt-gaatgttcaccggcgcattgt 644 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 gtcccttctcgctcgcgtgcgc 23 |||||||||||||||||||||| Sbjct: 15 gtcccttctcgctcgcgtgcgc 36
>ref|NM_192229.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 700 bits (353), Expect = 0.0 Identities = 504/553 (91%), Gaps = 1/553 (0%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 42 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 101 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgt 191 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 102 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgcatgctggattacaatgt 161 Query: 192 cctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaagacattgaaagg 251 || ||||||||||||||||| ||| |||||||||||||||| | ||||| ||||| || Sbjct: 162 gctcggaggaaagtgcaaccgcgggatctctgtcattgatagtttcaagatgttgaaggg 221 Query: 252 tgtagatgttttgagcaaggaggagacgtttcttgcctgcacccttggttggtgtattga 311 |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 222 cactgatgttctgaataaggaggagacatttcttgcctgcacccttggttggtgcattga 281 Query: 312 atggcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacg 371 |||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 282 atggcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacg 341 Query: 372 gggccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggat 431 ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 342 tggccagccttgctggtttagggtgcctcaggttgggctcattgctgtaaatgatggtat 401 Query: 432 tatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaaccgtatta 491 |||||||||||||||||||||||| |||||||||||||| || | |||||| | |||||| Sbjct: 402 tatccttcgcaaccatatttcacgaattcttcaacgccattttaaaggaaagctgtatta 461 Query: 492 tgttgatctcattgatttgttcaatgaggttgagttcaagacagcttcagggcagttgtt 551 |||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 462 tgttgatctcattgatttgttcaatgaggttgagtttaagactgcttcaggtcaattgtt 521 Query: 552 ggatcttatcactactcacgagggagaaaaggatctcacaaaatataacttggaatgttc 611 ||||||||| |||||||| ||||||||||||||||||||||| || ||||| || |||| Sbjct: 522 ggatcttattactactcatgagggagaaaaggatctcacaaagtacaactt-gacagttc 580 Query: 612 accggcgcattgt 624 |||| |||||||| Sbjct: 581 accgccgcattgt 593
>dbj|AK061657.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D06, full insert sequence Length = 1332 Score = 700 bits (353), Expect = 0.0 Identities = 504/553 (91%), Gaps = 1/553 (0%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 185 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgt 191 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 186 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgcatgctggattacaatgt 245 Query: 192 cctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaagacattgaaagg 251 || ||||||||||||||||| ||| |||||||||||||||| | ||||| ||||| || Sbjct: 246 gctcggaggaaagtgcaaccgcgggatctctgtcattgatagtttcaagatgttgaaggg 305 Query: 252 tgtagatgttttgagcaaggaggagacgtttcttgcctgcacccttggttggtgtattga 311 |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 306 cactgatgttctgaataaggaggagacatttcttgcctgcacccttggttggtgcattga 365 Query: 312 atggcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacg 371 |||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 366 atggcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacg 425 Query: 372 gggccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggat 431 ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 426 tggccagccttgctggtttagggtgcctcaggttgggctcattgctgtaaatgatggtat 485 Query: 432 tatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaaccgtatta 491 |||||||||||||||||||||||| |||||||||||||| || | |||||| | |||||| Sbjct: 486 tatccttcgcaaccatatttcacgaattcttcaacgccattttaaaggaaagctgtatta 545 Query: 492 tgttgatctcattgatttgttcaatgaggttgagttcaagacagcttcagggcagttgtt 551 |||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 546 tgttgatctcattgatttgttcaatgaggttgagtttaagactgcttcaggtcaattgtt 605 Query: 552 ggatcttatcactactcacgagggagaaaaggatctcacaaaatataacttggaatgttc 611 ||||||||| |||||||| ||||||||||||||||||||||| || ||||| || |||| Sbjct: 606 ggatcttattactactcatgagggagaaaaggatctcacaaagtacaactt-gacagttc 664 Query: 612 accggcgcattgt 624 |||| |||||||| Sbjct: 665 accgccgcattgt 677
>dbj|D85317.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl pyrophosphate synthase, complete cds Length = 1289 Score = 700 bits (353), Expect = 0.0 Identities = 504/553 (91%), Gaps = 1/553 (0%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 83 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 142 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgt 191 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 143 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgcatgctggattacaatgt 202 Query: 192 cctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaagacattgaaagg 251 || ||||||||||||||||| ||| |||||||||||||||| | ||||| ||||| || Sbjct: 203 gctcggaggaaagtgcaaccgcgggatctctgtcattgatagtttcaagatgttgaaggg 262 Query: 252 tgtagatgttttgagcaaggaggagacgtttcttgcctgcacccttggttggtgtattga 311 |||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 263 cactgatgttctgaataaggaggagacatttcttgcctgcacccttggttggtgcattga 322 Query: 312 atggcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacg 371 |||||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 323 atggcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacg 382 Query: 372 gggccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggat 431 ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| || Sbjct: 383 tggccagccttgctggtttagggtgcctcaggttgggctcattgctgtaaatgatggtat 442 Query: 432 tatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaaccgtatta 491 |||||||||||||||||||||||| |||||||||||||| || | |||||| | |||||| Sbjct: 443 tatccttcgcaaccatatttcacgaattcttcaacgccattttaaaggaaagctgtatta 502 Query: 492 tgttgatctcattgatttgttcaatgaggttgagttcaagacagcttcagggcagttgtt 551 |||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 503 tgttgatctcattgatttgttcaatgaggttgagtttaagactgcttcaggtcaattgtt 562 Query: 552 ggatcttatcactactcacgagggagaaaaggatctcacaaaatataacttggaatgttc 611 ||||||||| |||||||| ||||||||||||||||||||||| || ||||| || |||| Sbjct: 563 ggatcttattactactcatgagggagaaaaggatctcacaaagtacaactt-gacagttc 621 Query: 612 accggcgcattgt 624 |||| |||||||| Sbjct: 622 accgccgcattgt 634
>gb|AY110411.1| Zea mays CL242_1 mRNA sequence Length = 2504 Score = 630 bits (318), Expect = e-177 Identities = 462/510 (90%) Strand = Plus / Plus Query: 94 atatacagcaggctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgag 153 |||||||||| ||||||| |||||||||||||||||||||||||||| ||||| |||||| Sbjct: 178 atatacagcaagctcaagcaggagatgctcgaggaccccgccttcgaattcactgacgag 237 Query: 154 tccctccagtggatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgt 213 || ||||||||||||||||||||| ||||||||||||| || |||||||||||||| ||| Sbjct: 238 tcgctccagtggatcgaccgcatgttggattacaatgtgcttggaggaaagtgcaatcgt 297 Query: 214 gggctctctgtcattgatagctacaagacattgaaaggtgtagatgttttgagcaaggag 273 ||||| ||||| | ||||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 298 gggctatctgttgtcgatagctacaagattttgaagggtgttgacgttctgagcaaggag 357 Query: 274 gagacgtttcttgcctgcacccttggttggtgtattgaatggcttcaagcatattttctt 333 ||||| ||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 358 gagacatttctggcctgcacccttggctggtgtattgaatggcttcaagcttattttctt 417 Query: 334 gtgcttgatgatatcatggacaactcccagacacgacggggccagccttgctggtttagg 393 |||||||||||||| |||||||||||||||||||| || |||||||||||||||||||| Sbjct: 418 gtgcttgatgatattatggacaactcccagacacggcgtggccagccttgctggtttaga 477 Query: 394 gtgcctcaggttggccttattgctgtaaacgatgggattatccttcgcaaccatatttca 453 ||||| |||||||| || ||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 478 gtgccacaggttggtctcattgcagtaaatgatgggattatccttcgcaatcatatctca 537 Query: 454 cggattcttcaacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttc 513 || || |||||||||||||||| |||||| || |||||||||||| ||||||| |||||| Sbjct: 538 cgaatccttcaacgccacttcaaaggaaagccatattatgttgatatcattgacttgttc 597 Query: 514 aatgaggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgag 573 || ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 598 aacgaggttgagttcaagacagcttcagggcaaatgttggatcttatcactacccacgag 657 Query: 574 ggagaaaaggatctcacaaaatataacttg 603 || ||||||||||| || |||||||||||| Sbjct: 658 ggtgaaaaggatctaactaaatataacttg 687
>gb|BT016427.1| Zea mays clone Contig260 mRNA sequence Length = 1469 Score = 365 bits (184), Expect = 1e-97 Identities = 418/496 (84%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | |||||| Sbjct: 206 gctcaaggaggagctgctcaccgacccggccttcgagttcaccgaggagtcacgccagtg 265 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 ||||||||||||| | || |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 266 gatcgaccgcatggttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgt 325 Query: 225 cattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttct 284 | || ||||||||| | || || | |||| | || || ||||||| ||||| || Sbjct: 326 ggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaacgttcct 385 Query: 285 tgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatga 344 ||| |||||||| || ||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 386 tgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgcttgatga 445 Query: 345 tatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggt 404 ||||||||| |||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 446 tatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcctcaggt 505 Query: 405 tggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttca 464 |||| | ||||||| || || ||||| ||||||||||||||||| |||||||| |||| Sbjct: 506 tggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggatccttcg 565 Query: 465 acgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttga 524 |||||||| | || ||||| || |||| ||||||| |||||||||||||||||||||| Sbjct: 566 gcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatgaggttga 625 Query: 525 gttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagga 584 |||||||||||||||||| ||| || |||| ||||||||||| || ||||||||||| || Sbjct: 626 gttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggagaaaaaga 685 Query: 585 tctcacaaaatataac 600 ||| ||||| |||||| Sbjct: 686 tctaacaaagtataac 701
>gb|AF330037.1| Zea mays truncated geranylgeranyl-diphosphate synthase mRNA, partial cds Length = 1250 Score = 365 bits (184), Expect = 1e-97 Identities = 418/496 (84%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | |||||| Sbjct: 39 gctcaaggaggagctgctcaccgacccggccttcgagttcaccgaggagtcacgccagtg 98 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 ||||||||||||| | || |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 99 gatcgaccgcatggttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgt 158 Query: 225 cattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttct 284 | || ||||||||| | || || | |||| | || || ||||||| ||||| || Sbjct: 159 ggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaacgttcct 218 Query: 285 tgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatga 344 ||| |||||||| || ||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 219 tgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgcttgatga 278 Query: 345 tatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggt 404 ||||||||| |||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 279 tatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcctcaggt 338 Query: 405 tggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttca 464 |||| | ||||||| || || ||||| ||||||||||||||||| |||||||| |||| Sbjct: 339 tggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggatccttcg 398 Query: 465 acgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttga 524 |||||||| | || ||||| || |||| ||||||| |||||||||||||||||||||| Sbjct: 399 gcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatgaggttga 458 Query: 525 gttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagga 584 |||||||||||||||||| ||| || |||| ||||||||||| || ||||||||||| || Sbjct: 459 gttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggagaaaaaga 518 Query: 585 tctcacaaaatataac 600 ||| ||||| |||||| Sbjct: 519 tctaacaaagtataac 534
>gb|AF330036.1| Zea mays geranylgeranyl-diphosphate synthase mRNA, complete cds Length = 1399 Score = 365 bits (184), Expect = 1e-97 Identities = 418/496 (84%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | |||||| Sbjct: 188 gctcaaggaggagctgctcaccgacccggccttcgagttcaccgaggagtcacgccagtg 247 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 ||||||||||||| | || |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 248 gatcgaccgcatggttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgt 307 Query: 225 cattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttct 284 | || ||||||||| | || || | |||| | || || ||||||| ||||| || Sbjct: 308 ggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaacgttcct 367 Query: 285 tgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatga 344 ||| |||||||| || ||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 368 tgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgcttgatga 427 Query: 345 tatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggt 404 ||||||||| |||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 428 tatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcctcaggt 487 Query: 405 tggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttca 464 |||| | ||||||| || || ||||| ||||||||||||||||| |||||||| |||| Sbjct: 488 tggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggatccttcg 547 Query: 465 acgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttga 524 |||||||| | || ||||| || |||| ||||||| |||||||||||||||||||||| Sbjct: 548 gcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatgaggttga 607 Query: 525 gttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagga 584 |||||||||||||||||| ||| || |||| ||||||||||| || ||||||||||| || Sbjct: 608 gttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggagaaaaaga 667 Query: 585 tctcacaaaatataac 600 ||| ||||| |||||| Sbjct: 668 tctaacaaagtataac 683
>gb|AY108110.1| Zea mays PCO074380 mRNA sequence Length = 1453 Score = 365 bits (184), Expect = 1e-97 Identities = 418/496 (84%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | |||||| Sbjct: 188 gctcaaggaggagctgctcaccgacccggccttcgagttcaccgaggagtcacgccagtg 247 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 ||||||||||||| | || |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 248 gatcgaccgcatggttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgt 307 Query: 225 cattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttct 284 | || ||||||||| | || || | |||| | || || ||||||| ||||| || Sbjct: 308 ggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaacgttcct 367 Query: 285 tgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatga 344 ||| |||||||| || ||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 368 tgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgcttgatga 427 Query: 345 tatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggt 404 ||||||||| |||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 428 tatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcctcaggt 487 Query: 405 tggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttca 464 |||| | ||||||| || || ||||| ||||||||||||||||| |||||||| |||| Sbjct: 488 tggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggatccttcg 547 Query: 465 acgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttga 524 |||||||| | || ||||| || |||| ||||||| |||||||||||||||||||||| Sbjct: 548 gcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatgaggttga 607 Query: 525 gttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagga 584 |||||||||||||||||| ||| || |||| ||||||||||| || ||||||||||| || Sbjct: 608 gttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggagaaaaaga 667 Query: 585 tctcacaaaatataac 600 ||| ||||| |||||| Sbjct: 668 tctaacaaagtataac 683
>gb|L39789.1|MZEFPS Zea mays farnesyl pyrophosphate synthetase (fps) mRNA, complete cds Length = 1378 Score = 365 bits (184), Expect = 1e-97 Identities = 418/496 (84%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||| ||||||||||||||||| ||||| | |||||| Sbjct: 162 gctcaaggaggagctgctcaccgacccggccttcgagttcaccgaggagtcacgccagtg 221 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 ||||||||||||| | || |||||||| || ||||| ||||| ||||||||||||||||| Sbjct: 222 gatcgaccgcatggttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgt 281 Query: 225 cattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttct 284 | || ||||||||| | || || | |||| | || || ||||||| ||||| || Sbjct: 282 ggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaacgttcct 341 Query: 285 tgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatga 344 ||| |||||||| || ||||| |||||||||||||| || | ||||||||||||||||| Sbjct: 342 tgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgcttgatga 401 Query: 345 tatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggt 404 ||||||||| |||| || || || || ||||||||||||||||| |||||||||||||| Sbjct: 402 tatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcctcaggt 461 Query: 405 tggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttca 464 |||| | ||||||| || || ||||| ||||||||||||||||| |||||||| |||| Sbjct: 462 tggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggatccttcg 521 Query: 465 acgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttga 524 |||||||| | || ||||| || |||| ||||||| |||||||||||||||||||||| Sbjct: 522 gcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatgaggttga 581 Query: 525 gttcaagacagcttcagggcagttgttggatcttatcactactcacgagggagaaaagga 584 |||||||||||||||||| ||| || |||| ||||||||||| || ||||||||||| || Sbjct: 582 gttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggagaaaaaga 641 Query: 585 tctcacaaaatataac 600 ||| ||||| |||||| Sbjct: 642 tctaacaaagtataac 657
>gb|BT018228.1| Zea mays clone EL01N0561H08.c mRNA sequence Length = 1208 Score = 305 bits (154), Expect = 9e-80 Identities = 370/442 (83%) Strand = Plus / Plus Query: 159 ccagtggatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggct 218 ||||||||||||||||||| | || ||| || | || ||||| ||||| ||||||||||| Sbjct: 21 ccagtggatcgaccgcatggttgactaccatttactcggaggcaagtgtaaccgtgggct 80 Query: 219 ctctgtcattgatagctacaagacattgaaaggtgtagatgttttgagcaaggaggagac 278 |||||| | || ||||||||| | || || | |||| | || || ||||||| || Sbjct: 81 ctctgtggtcgacagctacaagctgctcaagggcgctgatgctctgggcgaggaggaaac 140 Query: 279 gtttcttgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgct 338 ||| ||||| |||||||| || ||||| |||||||||||||| || | ||||||||||| Sbjct: 141 gttccttgcttgcaccctcggctggtgcattgaatggcttcaggctttctttcttgtgct 200 Query: 339 tgatgatatcatggacaactcccagacacgacggggccagccttgctggtttagggtgcc 398 ||||||||||||||| |||| || || || || ||||||||||||||||| |||||||| Sbjct: 201 tgatgatatcatggatgactctcacactcgtcgcggccagccttgctggttcagggtgcc 260 Query: 399 tcaggttggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggat 458 |||||||||| | ||||||| || || ||||| ||||||||||||||||| |||||||| Sbjct: 261 tcaggttggcttaattgctgcgaatgacgggatcatccttcgcaaccatatctcacggat 320 Query: 459 tcttcaacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatga 518 |||| |||||||| | || ||||| || |||| ||||||| |||||||||||||||| Sbjct: 321 ccttcggcgccactttaagggcaaaccttactatgctgatctccttgatttgttcaatga 380 Query: 519 ggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggaga 578 |||||||||||||||||||||||| ||| || |||| ||||||||||| || |||||||| Sbjct: 381 ggttgagttcaagacagcttcaggtcagctgctggaccttatcactacccatgagggaga 440 Query: 579 aaaggatctcacaaaatataac 600 ||| ||||| ||||| |||||| Sbjct: 441 aaaagatctaacaaagtataac 462
>dbj|AK100273.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072A14, full insert sequence Length = 1452 Score = 244 bits (123), Expect = 3e-61 Identities = 264/311 (84%) Strand = Plus / Plus Query: 290 gcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatca 349 |||| ||||||||||| |||||||||||||||| || ||||| |||||||||||||||| Sbjct: 471 gcactcttggttggtgcgttgaatggcttcaagcttactttctcgtgcttgatgatatca 530 Query: 350 tggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggcc 409 |||| | || || || ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 531 tggatgattctcacactcgacgtggtcagccttgttggtttcgggtgcctcaggttggct 590 Query: 410 ttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgcc 469 |||||| | || |||||||||||||||||||||||||| | || || |||| | || Sbjct: 591 ccattgctatcaatgatgggattatccttcgcaaccatatcacgcgaatgcttcggctcc 650 Query: 470 acttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttca 529 |||| |||||||||| || |||| ||||||| ||||||| ||||||||||| ||||||| Sbjct: 651 actttagaggaaaactttactatgctgatctccttgatttattcaatgaggtcgagttca 710 Query: 530 agacagcttcagggcagttgttggatcttatcactactcacgagggagaaaaggatctca 589 ||||||||||||| || ||| | || |||||||||||||||||||||||||| ||||| | Sbjct: 711 agacagcttcaggtcaattgctagaccttatcactactcacgagggagaaaaagatctaa 770 Query: 590 caaaatataac 600 ||||||||| Sbjct: 771 acaaatataac 781 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||| Sbjct: 286 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 345 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 |||||| |||||| |||| |||||||| | ||||| |||||||| ||||| |||||||| Sbjct: 346 gatcgatcgcatgttggactacaatgtacctggagggaagtgcaatcgtggtctctctgt 405
>dbj|AK073822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I20, full insert sequence Length = 1452 Score = 236 bits (119), Expect = 7e-59 Identities = 263/311 (84%) Strand = Plus / Plus Query: 290 gcacccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatca 349 |||| ||||||||||| |||||||||||||||| || ||||| |||||||||||||||| Sbjct: 543 gcactcttggttggtgcgttgaatggcttcaagcttactttctcgtgcttgatgatatca 602 Query: 350 tggacaactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggcc 409 |||| | || || || ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 603 tggatgattctcacactcgacgtggtcagccttgttggtttcgggtgcctcaggttggct 662 Query: 410 ttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgcc 469 |||||| | || ||||| |||||||||||||||||||| | || || |||| | || Sbjct: 663 ccattgctatcaatgatggaattatccttcgcaaccatatcacgcgaatgcttcggctcc 722 Query: 470 acttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttca 529 |||| |||||||||| || |||| ||||||| ||||||| ||||||||||| ||||||| Sbjct: 723 actttagaggaaaactttactatgctgatctccttgatttattcaatgaggtcgagttca 782 Query: 530 agacagcttcagggcagttgttggatcttatcactactcacgagggagaaaaggatctca 589 ||||||||||||| || ||| | || |||||||||||||||||||||||||| ||||| | Sbjct: 783 agacagcttcaggtcaattgctagaccttatcactactcacgagggagaaaaagatctaa 842 Query: 590 caaaatataac 600 ||||||||| Sbjct: 843 acaaatataac 853 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||| Sbjct: 358 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 417 Query: 165 gatcgaccgcatgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgt 224 |||||| |||||| |||| |||||||| | ||||| |||||||| ||||| |||||||| Sbjct: 418 gatcgatcgcatgttggactacaatgtacctggagggaagtgcaatcgtggtctctctgt 477
>gb|AF470318.1| Musa acuminata farnesyl pyrophosphare synthase (FPPS) mRNA, complete cds Length = 1269 Score = 180 bits (91), Expect = 4e-42 Identities = 244/295 (82%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 |||| |||||||| |||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 304 ccctcggttggtgcattgaatggcttcaagcatattttctagtccttgatgatatcatgg 363 Query: 353 acaactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggcctta 412 | ||||| || || | || || || | ||| |||||||| || || ||||||| |||| Sbjct: 364 ataactcgcacactaggcgaggtcaactttgttggtttagagttccaaaggttggactta 423 Query: 413 ttgctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgccact 472 |||||||||| ||||| ||| | || ||||| || ||| | ||||||||| || | || | Sbjct: 424 ttgctgtaaatgatggaattctactccgcaatcacattcctcggattcttaaaaggcatt 483 Query: 473 tcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttcaaga 532 | | ||||| || || ||||| |||||| |||||||||||||||||||||| || ||| Sbjct: 484 ttaagggaaagccttactatgtagatctccttgatttgttcaatgaggttgaatttcaga 543 Query: 533 cagcttcagggcagttgttggatcttatcactactcacgagggagaaaaggatct 587 |||||||||||||| || | ||||| || |||||||| || |||||||||||||| Sbjct: 544 cagcttcagggcagatgcttgatctcattactactcatgaaggagaaaaggatct 598 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgt 191 ||||||||| | |||||||||| ||| ||| ||||||||| | |||||||| |||||||| Sbjct: 143 cgccttcgattgcaccgacgaggcccgccaatggatcgacaggatgctggactacaatgt 202 Query: 192 cctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaag 240 | ||||| ||| |||||||| | |||||||| |||||||||||| Sbjct: 203 acctggaggcaagctaaaccgtggattgtctgtcatcgatagctacaag 251
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 172 bits (87), Expect = 9e-40 Identities = 99/103 (96%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 29151688 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 29151747 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgc 174 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 29151748 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgc 29151790 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 401 aggttggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattc 460 ||||||| || ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 29153966 aggttgggctcattgctgtaaatgatggtattatccttcgcaaccatatttcacgaattc 29154025 Query: 461 ttcaacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgagg 520 |||||||||| || | |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 29154026 ttcaacgccattttaaaggaaagctgtattatgttgatctcattgatttgttcaatgagg 29154085 Query: 521 t 521 | Sbjct: 29154086 t 29154086 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| || Sbjct: 29153637 gcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacgtgg 29153696 Query: 375 ccagccttgctggtttagggtgcctcaggt 404 |||||||||||||||||||||||||||||| Sbjct: 29153697 ccagccttgctggtttagggtgcctcaggt 29153726 Score = 137 bits (69), Expect = 5e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 175 atgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagc 234 ||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||| Sbjct: 29153398 atgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctctgtcattgatagt 29153457 Query: 235 tacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttcttgcctgcacc 294 | ||||| ||||| || |||||| ||| ||||||||||| ||||||||||||||| Sbjct: 29153458 ttcaagatgttgaagggcactgatgttctgaataaggaggagacatttcttgcctgcacc 29153517 Query: 295 cttggttggtgtattgaatgg 315 ||||||||||| ||||||||| Sbjct: 29153518 cttggttggtgcattgaatgg 29153538 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||||||||| ||||| |||||||| || |||||||||||||| |||||||| ||||||| Sbjct: 29154175 aggttgagtttaagactgcttcaggtcaattgttggatcttattactactcatgagggag 29154234 Query: 578 aaaaggatctcacaaaatataacttg 603 |||||||||||||||| || |||||| Sbjct: 29154235 aaaaggatctcacaaagtacaacttg 29154260 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactc 359 |||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 28747931 gcttcaggcctattttctggttcttgatgatataatggataactc 28747887 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 tatgttgatctcattgatttgttcaatgaggt 521 |||||||||||| | ||||| ||||||||||| Sbjct: 28747415 tatgttgatctcctagatttattcaatgaggt 28747384
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 172 bits (87), Expect = 9e-40 Identities = 99/103 (96%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112054 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 112113 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgc 174 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112114 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgc 112156 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 401 aggttggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattc 460 ||||||| || ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 114332 aggttgggctcattgctgtaaatgatggtattatccttcgcaaccatatttcacgaattc 114391 Query: 461 ttcaacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgagg 520 |||||||||| || | |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 114392 ttcaacgccattttaaaggaaagctgtattatgttgatctcattgatttgttcaatgagg 114451 Query: 521 t 521 | Sbjct: 114452 t 114452 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| || Sbjct: 114003 gcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacgtgg 114062 Query: 375 ccagccttgctggtttagggtgcctcaggt 404 |||||||||||||||||||||||||||||| Sbjct: 114063 ccagccttgctggtttagggtgcctcaggt 114092 Score = 137 bits (69), Expect = 5e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 175 atgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagc 234 ||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||| Sbjct: 113764 atgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctctgtcattgatagt 113823 Query: 235 tacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttcttgcctgcacc 294 | ||||| ||||| || |||||| ||| ||||||||||| ||||||||||||||| Sbjct: 113824 ttcaagatgttgaagggcactgatgttctgaataaggaggagacatttcttgcctgcacc 113883 Query: 295 cttggttggtgtattgaatgg 315 ||||||||||| ||||||||| Sbjct: 113884 cttggttggtgcattgaatgg 113904 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||||||||| ||||| |||||||| || |||||||||||||| |||||||| ||||||| Sbjct: 114541 aggttgagtttaagactgcttcaggtcaattgttggatcttattactactcatgagggag 114600 Query: 578 aaaaggatctcacaaaatataacttg 603 |||||||||||||||| || |||||| Sbjct: 114601 aaaaggatctcacaaagtacaacttg 114626
>dbj|AB021747.1| Oryza sativa (japonica cultivar-group) FPPS1 gene for farnesyl diphosphate synthase, complete cds Length = 7423 Score = 172 bits (87), Expect = 9e-40 Identities = 99/103 (96%) Strand = Plus / Plus Query: 72 ctccaaggccgagttcgcggaaatatacagcaggctcaaggaggagatgctcgaggaccc 131 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1991 ctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggaccc 2050 Query: 132 cgccttcgagttcaccgacgagtccctccagtggatcgaccgc 174 ||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2051 ggccttcgagttcaccgacgagtcgctccagtggatcgaccgc 2093 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Plus Query: 401 aggttggccttattgctgtaaacgatgggattatccttcgcaaccatatttcacggattc 460 ||||||| || ||||||||||| ||||| |||||||||||||||||||||||||| |||| Sbjct: 4269 aggttgggctcattgctgtaaatgatggtattatccttcgcaaccatatttcacgaattc 4328 Query: 461 ttcaacgccacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgagg 520 |||||||||| || | |||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 4329 ttcaacgccattttaaaggaaagctgtattatgttgatctcattgatttgttcaatgagg 4388 Query: 521 t 521 | Sbjct: 4389 t 4389 Score = 139 bits (70), Expect = 1e-29 Identities = 85/90 (94%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| || Sbjct: 3940 gcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacgtgg 3999 Query: 375 ccagccttgctggtttagggtgcctcaggt 404 |||||||||||||||||||||||||||||| Sbjct: 4000 ccagccttgctggtttagggtgcctcaggt 4029 Score = 137 bits (69), Expect = 5e-29 Identities = 123/141 (87%) Strand = Plus / Plus Query: 175 atgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagc 234 ||||||||||||||||| || ||||||||||||||||| ||| |||||||||||||||| Sbjct: 3701 atgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctctgtcattgatagt 3760 Query: 235 tacaagacattgaaaggtgtagatgttttgagcaaggaggagacgtttcttgcctgcacc 294 | ||||| ||||| || |||||| ||| ||||||||||| ||||||||||||||| Sbjct: 3761 ttcaagatgttgaagggcactgatgttctgaataaggaggagacatttcttgcctgcacc 3820 Query: 295 cttggttggtgtattgaatgg 315 ||||||||||| ||||||||| Sbjct: 3821 cttggttggtgcattgaatgg 3841 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||||||||| ||||| |||||||| || |||||||||||||| |||||||| ||||||| Sbjct: 4478 aggttgagtttaagactgcttcaggtcaattgttggatcttattactactcatgagggag 4537 Query: 578 aaaaggatctcacaaaatataacttg 603 |||||||||||||||| || |||||| Sbjct: 4538 aaaaggatctcacaaagtacaacttg 4563
>gb|AY349419.1| Hevea brasiliensis farnesyl diphosphate synthase (FDP) gene, complete cds Length = 1130 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 248 cttggttggtgtattgaatggcttcaagcctattttcttgtacttgatgacattatggat 307 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 | ||| || |||||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 308 agctctcatacacgacgtggtcagccttgctggtttagggtgcccaaggttggtctgatt 367 Query: 415 gctgtaaacgatgggattatccttcgcaa 443 || | ||| ||||||||| | |||||||| Sbjct: 368 gcagcaaatgatgggattttgcttcgcaa 396
>gb|AY135188.1| Hevea brasiliensis farnesyl diphosphate synthase (FDP) mRNA, complete cds Length = 1166 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 247 cttggttggtgtattgaatggcttcaagcctattttcttgtacttgatgacattatggat 306 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 | ||| || |||||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 307 agctctcatacacgacgtggtcagccttgctggtttagggtgcccaaggttggtctgatt 366 Query: 415 gctgtaaacgatgggattatccttcgcaa 443 || | ||| ||||||||| | |||||||| Sbjct: 367 gcagcaaatgatgggattttgcttcgcaa 395
>emb|Z49786.1|HBFPSYNMR H.brasiliensis mRNA for farnesyl pyrophosphate synthase Length = 1292 Score = 145 bits (73), Expect = 2e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 284 cttggttggtgtattgaatggcttcaagcctattttcttgtacttgatgacattatggat 343 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 | ||| || |||||||| || ||||||||||||||||||||||| ||||||| || ||| Sbjct: 344 agctctcatacacgacgtggtcagccttgctggtttagggtgcccaaggttggtctgatt 403 Query: 415 gctgtaaacgatgggattatccttcgcaa 443 || | ||| ||||||||| | |||||||| Sbjct: 404 gcagcaaatgatgggattttgcttcgcaa 432
>dbj|AB086039.2| Phaseolus lunatus FPS mRNA for farnesyl pyrophosphate synthase, partial cds Length = 732 Score = 135 bits (68), Expect = 2e-28 Identities = 203/248 (81%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 |||||||||||||||||||||||||| || |||||||| || |||||||| || ||||| Sbjct: 43 cttggttggtgtattgaatggcttcaggcgtattttctagttcttgatgacattatggat 102 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 || || || ||||| |||| ||||| ||||||||||| ||||| ||||||| | ||| Sbjct: 103 aattctcacacacgtaggggtcagccatgctggtttagagtgcccaaggttgggatgatt 162 Query: 415 gctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgccacttc 474 || | ||| ||||| || | || | ||||||||| |||| |||||| | || ||| Sbjct: 163 gcagcaaatgatggagttttactaagaaaccatattccacgcattcttaagaaacatttc 222 Query: 475 agaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttcaagaca 534 || |||||||| |||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 223 aggggaaaaccttattatgttgatcttcttgatctgttcaatgaggttgagttccagact 282 Query: 535 gcttcagg 542 |||||||| Sbjct: 283 gcttcagg 290
>gb|U15777.1|LAU15777 Lupinus albus farnesyl pyrophosphate synthase (fps1) mRNA, complete cds Length = 1304 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 |||||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 304 cttggttggtgtattgaatggcttcaggcatatttccttgttcttgatgacattatggat 363 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 |||||||| ||||| || || ||||| || ||||| || || || ||||||| | ||| Sbjct: 364 aactcccacacacggcgtggtcagccatgttggttcagagtacccaaggttggaatgatt 423 Query: 415 gctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgccacttc 474 || | ||| |||||| | | || || ||||||||| | || || ||| | |||||| Sbjct: 424 gcagcaaatgatggggtgctgctacggaaccatattcctcgtatccttaagaaacacttc 483 Query: 475 agaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttcaagaca 534 || |||||||| ||||||| |||||| ||||| |||| |||||||||||||| | || Sbjct: 484 aggggaaaaccttattatgctgatcttcttgatctgtttaatgaggttgagtttcaaact 543 Query: 535 gcttcagggcagttgttggatcttatcactac 566 |||||||||||| || | ||||| |||||||| Sbjct: 544 gcttcagggcagatgatagatctgatcactac 575
>emb|Y12072.1|CAFPS1 G.arboreum mRNA for farnesyl pyrophosphate synthase Length = 1286 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||| | Sbjct: 329 ggttggtgtattgaatggcttcaggcatattttcttgttcttgatgacatcatggacagc 388 Query: 358 tcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttattgct 417 || || || || || ||||||||||| |||||||| |||| ||||||| | |||||| Sbjct: 389 tctcacacccggcgtggccagccttgttggtttagattgccgaaggttggtatgattgct 448 Query: 418 gtaaacgatgggattatccttcgcaa 443 ||||| || || |||| |||||||| Sbjct: 449 gtaaatgacggtgttatacttcgcaa 474
>gb|AF112881.1|AF112881 Artemisia annua farnesyl diphosphate synthase mRNA, complete cds Length = 1333 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 306 cccttggttggtgtattgaatggcttcaagcatactttcttgtgcttgatgatatcatgg 365 Query: 353 ac 354 || Sbjct: 366 ac 367
>gb|AF136602.1|AF136602 Artemisia annua farnesyl diphosphate synthase (fps2) mRNA, complete cds Length = 1333 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 306 cccttggttggtgtattgaatggcttcaagcatactttcttgtgcttgatgatatcatgg 365 Query: 353 ac 354 || Sbjct: 366 ac 367
>gb|U36376.1|AAU36376 Artemisia annua farnesyl diphosphate synthase (fps1) mRNA, complete cds Length = 1337 Score = 115 bits (58), Expect = 2e-22 Identities = 61/62 (98%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 306 cccttggttggtgtattgaatggcttcaagcatactttcttgtgcttgatgatatcatgg 365 Query: 353 ac 354 || Sbjct: 366 ac 367
>gb|AF268889.1|AF268889 Humulus lupulus farnesyl pyrophosphate synthase mRNA, complete cds Length = 1241 Score = 111 bits (56), Expect = 3e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 |||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 237 cttggttggtgtattgaatggcttcaagcatattttttggttcttgatgatatcatggat 296 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || || || || ||||||||||| || || ||||||| | ||| Sbjct: 297 aactctgttacacgtcgcggtcaaccctgctggtttagagtaccaaaggttggattgatt 356 Query: 415 gctgtaaacgatgggattatccttcgcaaccatatt 450 |||| ||||||||| ||| | ||||| ||||||||| Sbjct: 357 gctgcaaacgatggcattctacttcgaaaccatatt 392 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 136 ttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgtccta 195 |||||||||||||| || || | ||| ||| |||| || ||||||||||||||||||| | Sbjct: 78 ttcgagttcaccgatgattctcgccaatgggtcgaacggatgctggattacaatgtccca 137 Query: 196 ggagg 200 ||||| Sbjct: 138 ggagg 142
>dbj|AB053487.1| Humulus lupulus fpps mRNA for farnesyl pyrophophate synthase, complete cds Length = 1029 Score = 111 bits (56), Expect = 3e-21 Identities = 131/156 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 |||||||||||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 232 cttggttggtgtattgaatggcttcaagcatattttttggttcttgatgatatcatggat 291 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || || || || ||||||||||| || || ||||||| | ||| Sbjct: 292 aactctgttacacgtcgcggtcaaccctgctggtttagagtaccaaaggttggattgatt 351 Query: 415 gctgtaaacgatgggattatccttcgcaaccatatt 450 |||| ||||||||| ||| | ||||| ||||||||| Sbjct: 352 gctgcaaacgatggcattctacttcgaaaccatatt 387 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 136 ttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattacaatgtccta 195 |||||||||||||| || || | ||| ||| |||| || ||||||||||||||||||| | Sbjct: 73 ttcgagttcaccgatgattctcgccaatgggtcgaacggatgctggattacaatgtccca 132 Query: 196 ggagg 200 ||||| Sbjct: 133 ggagg 137
>ref|NM_202836.1| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.2 mRNA, complete cds Length = 1291 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 292 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 351 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 352 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 411 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 412 gccattaacgatgggattctacttcgcaatcatat 446
>ref|NM_117823.2| Arabidopsis thaliana FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2); dimethylallyltranstransferase/ geranyltranstransferase AT4G17190 (FPS2) transcript variant AT4G17190.1 mRNA, complete cds Length = 1278 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 279 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 338 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 339 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 398 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 399 gccattaacgatgggattctacttcgcaatcatat 433
>gb|AY787627.1| Centella asiatica farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1340 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 295 cttggttggtgtattgaatggcttcaagcttattttcttgtgcttgatgatatcatgga 353
>gb|AY117354.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1060 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 232 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 291 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 292 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 351 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 352 gccattaacgatgggattctacttcgcaatcatat 386
>gb|AY072207.1| Arabidopsis thaliana putative farnesyl-pyrophosphate synthetase FPS2 (At4g17190) mRNA, complete cds Length = 1292 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 278 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 337 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 338 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 397 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 398 gccattaacgatgggattctacttcgcaatcatat 432
>emb|BX827727.1|CNS0A4KD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH15ZF05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1198 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 237 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 296 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 297 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 356 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 357 gccattaacgatgggattctacttcgcaatcatat 391
>gb|L46349.1|ATHFPS2R Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) mRNA, complete cds Length = 1266 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||||||||| Sbjct: 278 cttggttggtgcattgaatggcttcaagcttatttccttgtgcttgatgacatcatggac 337 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| ||||| || ||||||||||| |||||||| ||| ||||||| | ||| Sbjct: 338 aactctgtcacacgccgtggccagccttgttggtttagaaagccaaaggttggtatgatt 397 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || | |||||||||||| | |||||||| ||||| Sbjct: 398 gccattaacgatgggattctacttcgcaatcatat 432
>emb|X82542.1|PAFPS1 P.argentatum mRNA for farnesyl diphosphate synthase (FPS1) Length = 1283 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 283 cccttggttggtgcattgaatggcttcaagcatactttcttgtgcttgatgatatcatgg 342 Query: 353 a 353 | Sbjct: 343 a 343
>gb|U20771.1|LAU20771 Lupinus albus farnesyl pyrophosphate synthase (fps1) mRNA, complete cds Length = 1320 Score = 105 bits (53), Expect = 2e-19 Identities = 233/293 (79%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 289 cttggttggtgcattgaatggcttcaggcatatttccttgttcttgatgacatcatggat 348 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 ||||| || ||||| || || || || ||||||||||| || || ||||||| | ||| Sbjct: 349 aactctcacacacggcgtggtcacccgtgctggtttagagtacccaaggttggaatgatt 408 Query: 415 gctgtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgccacttc 474 || |||||||||| | | || || ||||||||| | || || ||| | |||||| Sbjct: 409 gcaccaaacgatggggtggttctacgaaaccatattcctcgtatccttaagaaacacttc 468 Query: 475 agaggaaaaccgtattatgttgatctcattgatttgttcaatgaggttgagttcaagaca 534 || ||||| || || ||||||||||| ||||| |||| |||||||| ||||| |||| Sbjct: 469 aggggaaagccatactatgttgatctgcttgatctgtttaatgaggtcgagtttcagact 528 Query: 535 gcttcagggcagttgttggatcttatcactactcacgagggagaaaaggatct 587 |||||||| ||| || | ||||| |||||||| | || |||||||| ||||| Sbjct: 529 gcttcaggacagatgatagatctgatcactacactggaaggagaaaaagatct 581
>gb|AY308477.1| Artemisia tridentata subsp. spiciformis farnesyl diphosphate synthase (FDS-1) mRNA, complete cds Length = 1378 Score = 101 bits (51), Expect = 3e-18 Identities = 129/155 (83%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct: 312 cccttggttggtgtattgaatggcttcaagcgtactttctggtgcttgatgatatcatgg 371 Query: 353 acaactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggcctta 412 || | || || ||||| | || || || || |||||||| | || ||||||| | | Sbjct: 372 acgagtctcatacacgcagagggcaaccctgttggtttagattacccaaggttggtatga 431 Query: 413 ttgctgtaaacgatgggattatccttcgcaaccat 447 |||||| |||||||||||| | |||||||||||| Sbjct: 432 ttgctgcgaacgatgggattcttcttcgcaaccat 466
>gb|AY966012.1| Vitis vinifera farnesyl diphosphate synthase mRNA, complete cds Length = 1026 Score = 99.6 bits (50), Expect = 1e-17 Identities = 86/98 (87%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||| ||| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| Sbjct: 232 ggtttgtgcattgaatggcttcaagcatatttccttgtgcttgatgatattatggataac 291 Query: 358 tcccagacacgacggggccagccttgctggtttagggt 395 || || ||||| || || || ||||||||||| ||||| Sbjct: 292 tcgcatacacgtcgaggtcaaccttgctggttcagggt 329 Score = 44.1 bits (22), Expect = 0.54 Identities = 91/114 (79%) Strand = Plus / Plus Query: 127 gaccccgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattac 186 |||||||| || |||||||| ||||| || | ||| ||| |||| || ||| |||| ||| Sbjct: 64 gaccccgcttttgagttcactgacgattctcgccaatgggtcgagcgtatgttggactac 123 Query: 187 aatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaag 240 ||||| | ||||||||| || || ||||||||||| |||| ||||||||| Sbjct: 124 aatgtacctggaggaaagctaaatcgagggctctctgttgttgacagctacaag 177
>gb|AF019892.1| Helianthus annuus farnesyl pyrophosphate synthase (FPS) mRNA, complete cds Length = 1347 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 246 cccttggttggtgcattgaatggcttcaagcatactttcttgtgcttgatgacatcatgg 305 Query: 353 ac 354 || Sbjct: 306 ac 307
>gb|AF384040.1|AF384040 Mentha x piperita farnesyl diphosphate synthase mRNA, complete cds Length = 1427 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| Sbjct: 351 cttggctggtgtattgaatggcttcaggcatattttcttgtccttgacgatataatggat 410 Query: 355 aactcccagacacgacggggccagccttgctggttta 391 || || || |||||||| || ||||| |||||||||| Sbjct: 411 aattctcacacacgacgtggtcagccatgctggttta 447
>emb|X82543.1|PAFPS2 P.argentatum mRNA for farnesyl diphosphate synthase (FPS2) Length = 1233 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 ||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 258 cccttggctggtgtgttgaatggcttcaagcatacttccttgtgcttgatgatatcatgg 317 Query: 353 a 353 | Sbjct: 318 a 318
>gb|AY083165.1| Malus x domestica farnesyl pyrophosphate synthase (FPPS) mRNA, complete cds Length = 1401 Score = 87.7 bits (44), Expect = 4e-14 Identities = 179/224 (79%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| || |||||||||||||||| |||||| || |||||||| |||||||| | Sbjct: 377 ggttggtgcatcgaatggcttcaagcattttttctggttcttgatgacatcatggatggc 436 Query: 358 tcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttattgct 417 || || ||||| || || ||||||||||||||||| |||| ||||||| | ||||| Sbjct: 437 tctcacacacgtcgtggtcagccttgctggtttagattgcccaaggttggtatgattgca 496 Query: 418 gtaaacgatgggattatccttcgcaaccatatttcacggattcttcaacgccacttcaga 477 ||||| ||||| || | ||||| |||||||| || ||||||| | |||||||| Sbjct: 497 gtaaatgatggtgttgtgcttcgaaaccatatcccaaggattctcagaaagtacttcaga 556 Query: 478 ggaaaaccgtattatgttgatctcattgatttgttcaatgaggt 521 | ||| || ||||| || ||||| ||||||||||||||||||| Sbjct: 557 gaaaagccatattacgtggatcttcttgatttgttcaatgaggt 600
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||| |||||||||||||||||||| || ||| | || |||||||||||||||||||||| Sbjct: 43238 aggtcgagttcaagacagcttcaggtcaattgctagaccttatcactactcacgagggag 43179 Query: 578 aaaaggatctcacaaaatataac 600 |||| ||||| | ||||||||| Sbjct: 43178 aaaaagatctaaacaaatataac 43156 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| || ||||| |||||||||||||||||||| | || || || ||||| || Sbjct: 43677 gcttcaagcttactttctcgtgcttgatgatatcatggatgattctcacactcgacgtgg 43618 Query: 375 ccagccttgctggtttagggtgcctcaggttgg 407 |||||||| |||||| |||||||||||||||| Sbjct: 43617 tcagccttgttggtttcgggtgcctcaggttgg 43585 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||| Sbjct: 44685 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 44626 Query: 165 gatcga 170 |||||| Sbjct: 44625 gatcga 44620 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 424 gatgggattatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaa 483 ||||| |||||||||||||||||||| | || || |||| | |||||| ||||||||| Sbjct: 43422 gatggaattatccttcgcaaccatatcacgcgaatgcttcggctccactttagaggaaaa 43363 Query: 484 ccgtattatgttgatctcattgatttgttcaatgaggt 521 | || |||| ||||||| ||||||| ||||||||||| Sbjct: 43362 ctttactatgctgatctccttgatttattcaatgaggt 43325
>gb|DQ153209.1| Bupleurum falcatum farensyl diphosphate synthase mRNA, partial cds Length = 113 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||||||||||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 1 cttggttggtgtattgaatggcttcaagcttattttcttgtacttgatgacattatgga 59
>gb|DQ087959.1| Panax ginseng farnesyl diphosphate synthase (FPS) mRNA, complete cds Length = 1343 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 341 cttggttggtgcattgaatggcttcaagcttattttcttgtgctcgatgatattatgga 399 Score = 44.1 bits (22), Expect = 0.54 Identities = 91/114 (79%) Strand = Plus / Plus Query: 127 gaccccgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattac 186 ||||| || |||||||||||||| || || | ||| ||| |||| || |||||||| || Sbjct: 173 gaccctgctttcgagttcaccgatgattctcgccaatgggtcgagcggatgctggactat 232 Query: 187 aatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaag 240 ||||| | ||||||||| || || ||||| ||||| ||||| ||||||||| Sbjct: 233 aatgtgcctggaggaaagctgaatcgagggctgtctgttattgacagctacaag 286
>gb|DQ059550.1| Panax notoginseng farnesyl pyrophosphate synthase mRNA, complete cds Length = 1409 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct: 361 cttggttggtgcattgaatggcttcaagcttattttctggtgcttgatgatattatgga 419 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 127 gaccccgccttcgagttcaccgacgagtccctccagtggatcgaccgcatgctggattac 186 ||||| || |||||||||||||| || || | ||| ||| |||| || |||||||| || Sbjct: 193 gaccctgctttcgagttcaccgatgattctcgccaatgggtcgagcggatgctggactat 252 Query: 187 aatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagctacaag 240 ||||| | ||||||||| ||||| ||||| ||||| ||||| ||||||||| Sbjct: 253 aatgtgcctggaggaaagctgaaccgagggctgtctgttattgacagctacaag 306
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||| |||||||||||||||||||| || ||| | || |||||||||||||||||||||| Sbjct: 26761299 aggtcgagttcaagacagcttcaggtcaattgctagaccttatcactactcacgagggag 26761240 Query: 578 aaaaggatctcacaaaatataac 600 |||| ||||| | ||||||||| Sbjct: 26761239 aaaaagatctaaacaaatataac 26761217 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| || ||||| |||||||||||||||||||| | || || || ||||| || Sbjct: 26761738 gcttcaagcttactttctcgtgcttgatgatatcatggatgattctcacactcgacgtgg 26761679 Query: 375 ccagccttgctggtttagggtgcctcaggttgg 407 |||||||| |||||| |||||||||||||||| Sbjct: 26761678 tcagccttgttggtttcgggtgcctcaggttgg 26761646 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||| Sbjct: 26762746 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 26762687 Query: 165 gatcga 170 |||||| Sbjct: 26762686 gatcga 26762681 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 424 gatgggattatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaa 483 ||||| |||||||||||||||||||| | || || |||| | |||||| ||||||||| Sbjct: 26761483 gatggaattatccttcgcaaccatatcacgcgaatgcttcggctccactttagaggaaaa 26761424 Query: 484 ccgtattatgttgatctcattgatttgttcaatgaggt 521 | || |||| ||||||| ||||||| ||||||||||| Sbjct: 26761423 ctttactatgctgatctccttgatttattcaatgaggt 26761386 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agcaaggaggagacgtttct 284 |||||||||||||||||||| Sbjct: 28691382 agcaaggaggagacgtttct 28691363
>gb|AF111710.1|AF111710 Oryza sativa subsp. indica putative dnaJ-like protein, putative myb-related protein, putative farnesyl pyrophosphate synthase, and hypothetical protein genes, complete cds Length = 43422 Score = 85.7 bits (43), Expect = 2e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 518 aggttgagttcaagacagcttcagggcagttgttggatcttatcactactcacgagggag 577 |||| |||||||||||||||||||| || ||| | || |||||||||||||||||||||| Sbjct: 32977 aggtcgagttcaagacagcttcaggtcaattgctagaccttatcactactcacgagggag 33036 Query: 578 aaaaggatctcacaaaatataac 600 |||| ||||| | ||||||||| Sbjct: 33037 aaaaagatctaaacaaatataac 33059 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| || ||||| |||||||||||||||||||| | || || || ||||| || Sbjct: 32538 gcttcaagcttactttctcgtgcttgatgatatcatggatgattctcacactcgacgtgg 32597 Query: 375 ccagccttgctggtttagggtgcctcaggttgg 407 |||||||| |||||| |||||||||||||||| Sbjct: 32598 tcagccttgttggtttcgggtgcctcaggttgg 32630 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Plus Query: 424 gatgggattatccttcgcaaccatatttcacggattcttcaacgccacttcagaggaaaa 483 ||||| |||||||||||||||||||| | || || |||| | |||||| ||||||||| Sbjct: 32793 gatggaattatccttcgcaaccatatcacgcgaatgcttcggctccactttagaggaaaa 32852 Query: 484 ccgtattatgttgatctcattgatttgttcaatgaggt 521 | || |||| ||||||| ||||||| ||||||||||| Sbjct: 32853 ctttactatgctgatctccttgatttattcaatgaggt 32890 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgac 150 ||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 31530 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgac 31575
>gb|AY461811.1| Taxus x media farnesyl diphosphate synthase mRNA, complete cds Length = 1464 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||| ||||||||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct: 353 cttggatggtgtattgaatggcttcaagcatatttccttgtgctagatgatataatgga 411 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Plus Query: 503 ttgatttgttcaatgaggttgagttcaagacagcttcagggcagttgttggatcttatca 562 ||||||||||||||||||||||||| | ||||||| ||||||||||| ||| | || | Sbjct: 561 ttgatttgttcaatgaggttgagtttcaaacagcttgtgggcagttgttagatttgatta 620 Query: 563 ctactcacgagggagaaaaggatctcacaaa 593 |||||||||| || | || ||||||| |||| Sbjct: 621 ctactcacgaaggggcaatggatctctcaaa 651
>gb|AY308476.1| Artemisia tridentata subsp. spiciformis farnesyl diphosphate synthase (FDS-2) mRNA, complete cds Length = 1221 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 293 cccttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgg 352 ||||||||||||| ||||||||||||||||||||||||||||| || ||||| || |||| Sbjct: 407 cccttggttggtgcattgaatggcttcaagcatattttcttgtactcgatgacattatgg 466 Query: 353 a 353 | Sbjct: 467 a 467
>gb|DQ375813.1| Vitis vinifera farnesyl diphosphate synthase gene, partial genomic sequence Length = 1517 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||| || || Sbjct: 185 gcttcaagcatatttccttgtgcttgatgatattatggataactcgcatacacgtcgagg 244 Query: 375 ccagccttgctggtttagggt 395 || ||||||||||| ||||| Sbjct: 245 tcaaccttgctggttcagggt 265
>gb|AF390138.1|AF390138 X Citrofortunella microcarpa farnesyldiphosphate synthase (FPS1) mRNA, complete cds Length = 1392 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 301 tggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||| || |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 337 tggtgcatcgaatggcttcaagcatattttcttgttcttgatgatatcatgga 389
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || Sbjct: 15150 gcttcaagcttatttccttgtgcttgatgacatcatggacaactctgtcacacgccgtgg 15091 Query: 375 ccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggattat 434 ||||||||| |||||||| ||| ||||||| | ||||| | |||||||||||| | Sbjct: 15090 ccagccttgttggtttagaaagccaaaggttggtatgattgccattaacgatgggattct 15031 Query: 435 ccttcgcaaccatat 449 |||||||| ||||| Sbjct: 15030 acttcgcaatcatat 15016
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || Sbjct: 4515 gcttcaagcttatttccttgtgcttgatgacatcatggacaactctgtcacacgccgtgg 4456 Query: 375 ccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggattat 434 ||||||||| |||||||| ||| ||||||| | ||||| | |||||||||||| | Sbjct: 4455 ccagccttgttggtttagaaagccaaaggttggtatgattgccattaacgatgggattct 4396 Query: 435 ccttcgcaaccatat 449 |||||||| ||||| Sbjct: 4395 acttcgcaatcatat 4381
>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45 Length = 199548 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || Sbjct: 199063 gcttcaagcttatttccttgtgcttgatgacatcatggacaactctgtcacacgccgtgg 199004 Query: 375 ccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggattat 434 ||||||||| |||||||| ||| ||||||| | ||||| | |||||||||||| | Sbjct: 199003 ccagccttgttggtttagaaagccaaaggttggtatgattgccattaacgatgggattct 198944 Query: 435 ccttcgcaaccatat 449 |||||||| ||||| Sbjct: 198943 acttcgcaatcatat 198929
>gb|L46350.2|ATHFPS2G Arabidopsis thaliana farnesyl diphosphate synthase (FPS2) gene, complete cds Length = 4025 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 ||||||||| ||||| |||||||||||||| |||||||||||||| ||||| || || Sbjct: 1861 gcttcaagcttatttccttgtgcttgatgacatcatggacaactctgtcacacgccgtgg 1920 Query: 375 ccagccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggattat 434 ||||||||| |||||||| ||| ||||||| | ||||| | |||||||||||| | Sbjct: 1921 ccagccttgttggtttagaaagccaaaggttggtatgattgccattaacgatgggattct 1980 Query: 435 ccttcgcaaccatat 449 |||||||| ||||| Sbjct: 1981 acttcgcaatcatat 1995
>dbj|AB052681.1| Eucommia ulmoides EUFPS2 mRNA for putative FPP synthase 2, complete cds Length = 1304 Score = 77.8 bits (39), Expect = 4e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||||||||| || |||||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 354 cttggttggtgcatagaatggcttcaagcgtattttcttgttcttgatgacattatggat 413 Query: 355 aactcccagacacgacggggccagccttgctggtttagggtgcctcaggttggccttatt 414 | |||||| ||||| || ||||| || || ||||| || |||| |||| || | ||| Sbjct: 414 agctcccatacacgccgaggccaaccatgttggttcagattgccaaaggtcggtatgatt 473 Query: 415 gctgtaaacgatgggattatccttcgcaaccatat 449 || || |||||||| | || |||||||||||||| Sbjct: 474 gcagtgaacgatggactaatacttcgcaaccatat 508
>ref|NM_124151.2| Arabidopsis thaliana FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1); dimethylallyltranstransferase/ geranyltranstransferase AT5G47770 (FPS1) mRNA, complete cds Length = 1493 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 485 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 544 Query: 358 tc 359 || Sbjct: 545 tc 546 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 677 tatgttgaccttgttgatttgtttaatgaggttgagtt 714
>emb|X84695.1|CAFPS C.annuum mRNA for farnesyl pyrophosphate synthase Length = 1228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggac 354 ||||| ||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 301 cttggctggtgcattgaatggcttcaagcatacttccttgttcttgatgatataatggat 360 Query: 355 aactcccagacacg 368 ||||| || ||||| Sbjct: 361 aactctcatacacg 374 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 487 tattatgttgatctcattgatttgttcaatgaggttgagttcaagac 533 |||||||||||||| | |||||||| |||||||| |||||| |||| Sbjct: 493 tattatgttgatcttctagatttgtttaatgaggtagagttccagac 539
>gb|AY063112.1| Arabidopsis thaliana putative farnesyl diphosphate synthase precursor (At5g47770) mRNA, complete cds Length = 1186 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 361 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 420 Query: 358 tc 359 || Sbjct: 421 tc 422 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 553 tatgttgaccttgttgatttgtttaatgaggttgagtt 590
>gb|AF370324.1| Arabidopsis thaliana putative farnesyl diphosphate synthase precursor (At5g47770) mRNA, complete cds Length = 1475 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 485 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 544 Query: 358 tc 359 || Sbjct: 545 tc 546 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 677 tatgttgaccttgttgatttgtttaatgaggttgagtt 714
>emb|BX833933.1|CNS0A1UV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1242 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 274 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 333 Query: 358 tc 359 || Sbjct: 334 tc 335 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 466 tatgttgaccttgttgatttgtttaatgaggttgagtt 503
>emb|BX830785.1|CNS0A1WD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZG01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1262 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 270 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 329 Query: 358 tc 359 || Sbjct: 330 tc 331 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 462 tatgttgaccttgttgatttgtttaatgaggttgagtt 499
>emb|BX830585.1|CNS0A1Z7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1422 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 454 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 513 Query: 358 tc 359 || Sbjct: 514 tc 515 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 646 tatgttgaccttgttgatttgtttaatgaggttgagtt 683
>gb|U80605.1|ATU80605 Arabidopsis thaliana farnesyl diphosphate synthase precursor (FPS1) mRNA, complete cds Length = 1396 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||| ||| Sbjct: 388 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgatattatggataac 447 Query: 358 tc 359 || Sbjct: 448 tc 449 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 580 tatgttgaccttgttgatttgtttaatgaggttgagtt 617
>ref|NM_192180.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 279 gtttcttgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgct 338 ||||||||| |||| |||||||||| | || ||||||||||| || |||||||| || || Sbjct: 258 gtttcttgcatgcatccttggttggggcatcgaatggcttcaggcctattttctggttct 317 Query: 339 tgatgatatcatggacaactc 359 ||||||||| ||||| ||||| Sbjct: 318 tgatgatataatggataactc 338 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttga 524 |||||||||||| | ||||| |||||||||||||| Sbjct: 469 tatgttgatctcctagatttattcaatgaggttga 503
>dbj|AK099451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022H18, full insert sequence Length = 1079 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 279 gtttcttgcctgcacccttggttggtgtattgaatggcttcaagcatattttcttgtgct 338 ||||||||| |||| |||||||||| | || ||||||||||| || |||||||| || || Sbjct: 112 gtttcttgcatgcatccttggttggggcatcgaatggcttcaggcctattttctggttct 171 Query: 339 tgatgatatcatggacaactc 359 ||||||||| ||||| ||||| Sbjct: 172 tgatgatataatggataactc 192 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttga 524 |||||||||||| | ||||| |||||||||||||| Sbjct: 323 tatgttgatctcctagatttattcaatgaggttga 357
>gb|BT013910.1| Lycopersicon esculentum clone 132907F, mRNA sequence Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||| ||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 295 cttggctggtgcattgaatggcttcaagcatacttccttgttcttgatgatataatgga 353
>emb|BX826432.1|CNS0A41B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 968 Score = 69.9 bits (35), Expect = 1e-08 Identities = 107/131 (81%) Strand = Plus / Plus Query: 319 caagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacggggccag 378 ||||| ||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1 caagcttatttccttgtgcttgatgacatcatggacaactctgtcacacgccgtggccag 60 Query: 379 ccttgctggtttagggtgcctcaggttggccttattgctgtaaacgatgggattatcctt 438 ||||| |||||||| ||| ||||||| | ||||| | |||||||||||| | ||| Sbjct: 61 ccttgttggtttagaaagccaaaggttggtatgattgccattaacgatgggattctactt 120 Query: 439 cgcaaccatat 449 ||||| ||||| Sbjct: 121 cgcaatcatat 131
>gb|AF048747.1|AF048747 Lycopersicon esculentum farnesyl pyrophosphate synthase (FPS1) mRNA, complete cds Length = 1274 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||| ||||| |||||||||||||||||||| || ||||| ||||||||||| ||||| Sbjct: 264 cttggctggtgcattgaatggcttcaagcatacttccttgttcttgatgatataatgga 322
>gb|AY389818.1| Ginkgo biloba farnesyl diphosphate synthetase mRNA, complete cds Length = 1731 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 504 tgatttgttcaatgaggttgagttcaagacagcttcagggcagttgttggatcttatcac 563 |||||||||||||||||| |||||| | |||||||| || ||| || ||||||| ||||| Sbjct: 757 tgatttgttcaatgaggtcgagttccaaacagcttctggtcagatgctggatctgatcac 816 Query: 564 tactca 569 |||||| Sbjct: 817 tactca 822 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatggcttcaagcatattttcttgt 335 ||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 548 cttggctggtgcattgaatggcttcaagcctatttccttgt 588
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 105 gctcaaggaggagatgctcgaggaccccgccttcgagttcaccgacgagtccctccagtg 164 ||||||||||||| ||||| ||||||||||||||||||||||||| ||| | ||||| Sbjct: 986 gctcaaggaggagctgctcagggaccccgccttcgagttcaccgactcgtcgcggcagtg 927 Query: 165 gatcga 170 |||||| Sbjct: 926 gatcga 921
>emb|X75789.1|ATFPS A.thaliana mRNA for farnesyl pyrophosphate synthetase Length = 1224 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatggacaac 357 |||||||| ||||||||||| ||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 299 ggttggtgcattgaatggctccaagcttatttccttgtgcttgatgacattatggataac 358 Query: 358 tc 359 || Sbjct: 359 tc 360 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 490 tatgttgatctcattgatttgttcaatgaggttgagtt 527 |||||||| || |||||||||| |||||||||||||| Sbjct: 491 tatgttgaccttgttgatttgtttaatgaggttgagtt 528
>dbj|AB021979.1| Oryza sativa (japonica cultivar-group) mRNA for farnesyl diphosphate synthase, partial cds Length = 725 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/70 (87%) Strand = Plus / Plus Query: 531 gacagcttcagggcagttgttggatcttatcactactcacgagggagaaaaggatctcac 590 |||||||||||| || ||| | || |||||||||||||||||||||||||| ||||| | Sbjct: 1 gacagcttcaggtcaattgctagaccttatcactactcacgagggagaaaaagatctaaa 60 Query: 591 aaaatataac 600 ||||||||| Sbjct: 61 caaatataac 70
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 557 ttatcactactcacgagggagaaaaggatctcacaaaatataacttg 603 |||| |||||||| ||||||||||||||||||||||| || |||||| Sbjct: 1 ttattactactcatgagggagaaaaggatctcacaaagtacaacttg 47
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence Length = 126907 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactcccagacacgacgggg 374 |||||| |||||||||||||| ||||| || || ||||| |||||||| ||||| || || Sbjct: 64028 gcttcaggcatattttcttgttcttgacgacattatggataactcccatacacgtcgtgg 64087 Query: 375 ccagccttgctggt 388 ||||| ||||||| Sbjct: 64088 tcagccatgctggt 64101 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 469 cacttcagaggaaaaccgtattatgttgatctcattgatttgttcaatgaggt 521 ||||||| ||||| |||||||||||||| || ||||||||||||||||||| Sbjct: 64270 cacttcaagggaaagccgtattatgttgaacttcttgatttgttcaatgaggt 64322 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatgg 315 ||||||||||||||||||||| Sbjct: 63887 cttggttggtgtattgaatgg 63907
>dbj|AB017371.1| Gentiana lutea mRNA for Farnesyl pyrophosphate synthase, complete cds Length = 1348 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 301 tggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 ||||||||||||||||| || ||||| |||||||| |||||||| || ||||| Sbjct: 357 tggtgtattgaatggctccaggcatactttcttgtccttgatgacattatgga 409 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 175 atgctggattacaatgtcctaggaggaaagtgcaaccgtgggctctctgtcattgatagc 234 ||||||||||||||||| | ||||||||| |||| | || || ||||||||||||||| Sbjct: 231 atgctggattacaatgttcctggaggaaagctcaacagaggcctttctgtcattgatagc 290 Query: 235 ta 236 || Sbjct: 291 ta 292
>dbj|AB053486.1| Humulus lupulus fpps gene for farnesyl pyrophosphate synthase, complete cds Length = 4698 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactc 359 |||||||||||||||| | || ||||||||||||||||| ||||| Sbjct: 2907 gcttcaagcatattttttggttcttgatgatatcatggataactc 2951 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 atgctggattacaatgtcctaggagg 200 ||||||||||||||||||| |||||| Sbjct: 2568 atgctggattacaatgtcccaggagg 2593 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 cttggttggtgtattgaatgg 315 ||||||||||||||||||||| Sbjct: 2806 cttggttggtgtattgaatgg 2826
>emb|BX831849.1|CNS09ZJO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH33ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1404 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcatattttcttgtgcttgatgatatcatgga 353 |||||||| ||||| ||||| ||||| ||| | ||||||||||||||||| ||||| Sbjct: 436 ggttggtgcattgagtggctccaagcgtatgtccttgtgcttgatgatattatgga 491
>gb|L46367.2|ATHFPS1G Arabidopsis thaliana farnesyl diphosphate synthase (FPS1) gene, alternative products, complete cds Length = 3883 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 caagcatattttcttgtgcttgatgatatcatggacaactc 359 ||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 2060 caagcttatttccttgtgcttgatgatattatggataactc 2100
>dbj|AB016886.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCA23 Length = 82503 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 caagcatattttcttgtgcttgatgatatcatggacaactc 359 ||||| ||||| ||||||||||||||||| ||||| ||||| Sbjct: 23183 caagcttatttccttgtgcttgatgatattatggataactc 23223
>gb|AC117072.3| Dictyostelium discoideum chromosome 2 map 3879572-4071762 strain AX4, complete sequence Length = 192187 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 592 aaatataacttggaatgttcac 613 |||||||||||||||||||||| Sbjct: 123258 aaatataacttggaatgttcac 123237
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 tttcttgtgcttgatgatatcatgga 353 |||||| ||||||||||||||||||| Sbjct: 12807423 tttcttctgcttgatgatatcatgga 12807398
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 44 tggcgttgtcgaacggctccgg 65 |||||||||||||||||||||| Sbjct: 3767457 tggcgttgtcgaacggctccgg 3767478
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 328 tttcttgtgcttgatgatatcatgga 353 |||||| ||||||||||||||||||| Sbjct: 65547 tttcttctgcttgatgatatcatgga 65522
>gb|AY123428.1|AY123426S03 Papio anubis anubis neurofibromatosis type 2 region, section 3; and merlin (NF2) gene, exon 1 Length = 9402 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 gccagccttgctggtttaggg 394 ||||||||||||||||||||| Sbjct: 456 gccagccttgctggtttaggg 476
>gb|AC010485.6| Homo sapiens chromosome 19 clone CTD-2329C7, complete sequence Length = 125439 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 514 aatgaggttgagttcaagacagctt 538 |||| |||||||||||||||||||| Sbjct: 125396 aatggggttgagttcaagacagctt 125420
>dbj|AP003248.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431H09 Length = 166886 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 315 gcttcaagcatattttcttgtgcttgatgatatcatggacaactc 359 |||||| || |||||||| || ||||||||||| ||||| ||||| Sbjct: 131005 gcttcaggcctattttctggttcttgatgatataatggataactc 130961 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 490 tatgttgatctcattgatttgttcaatgaggt 521 |||||||||||| | ||||| ||||||||||| Sbjct: 130489 tatgttgatctcctagatttattcaatgaggt 130458
>gb|AC010510.6|AC010510 Homo sapiens chromosome 19 clone LLNLF-191G6, complete sequence Length = 42307 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 514 aatgaggttgagttcaagacagctt 538 |||| |||||||||||||||||||| Sbjct: 847 aatggggttgagttcaagacagctt 871
>gb|AC129477.11| Mus musculus chromosome 13, clone RP23-98D15, complete sequence Length = 251066 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 acagcttcagggcagttgttggat 555 |||||||||||||||| ||||||| Sbjct: 127758 acagcttcagggcagtagttggat 127781
>ref|XM_636898.1| Dictyostelium discoideum FDP synthase (DDB0215017), partial mRNA Length = 1149 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcat 325 ||||||||| | |||||||||||||||| Sbjct: 337 ggttggtgtgtcgaatggcttcaagcat 364
>gb|BT016871.1| Zea mays clone Contig704 mRNA sequence Length = 1384 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 aggctcaaggaggagatgct 122 |||||||||||||||||||| Sbjct: 599 aggctcaaggaggagatgct 580
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agcaaggaggagacgtttct 284 |||||||||||||||||||| Sbjct: 119174 agcaaggaggagacgtttct 119155
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 agcaaggaggagacgtttct 284 |||||||||||||||||||| Sbjct: 10095 agcaaggaggagacgtttct 10076
>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence Length = 113431 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 ttcaagcatattttcttgtgcttg 340 ||||||||||||||||||| |||| Sbjct: 25783 ttcaagcatattttcttgttcttg 25760
>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE Length = 116834 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 317 ttcaagcatattttcttgtgcttg 340 ||||||||||||||||||| |||| Sbjct: 69141 ttcaagcatattttcttgttcttg 69118
>emb|AL445123.11| Human DNA sequence from clone RP11-242F11 on chromosome 6 Contains the 3' part of a novel gene and a novel gene, complete sequence Length = 120709 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aagcatattttcttgtgctt 339 |||||||||||||||||||| Sbjct: 82072 aagcatattttcttgtgctt 82091
>emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chromosome 11 Contains a phosphoglycerate mutase (Pgam) family pseudogene, a pseudogene similar to part of chondroitin sulfate proteoglycan 6 Cspg6, the gene for a novel protein similar to human DSCAM-interacting protein 1, a novel gene, the Crlf3 gene for cytokine receptor-like factor 3, the 5' end of a novel gene and a CpG island, complete sequence Length = 204106 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 cattgaaaggtgtagatgtt 261 |||||||||||||||||||| Sbjct: 72693 cattgaaaggtgtagatgtt 72674
>gb|AC129961.2| Sus scrofa, clone RP44-428N16, complete sequence Length = 154348 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 agaaaaggatctcacaaaat 595 |||||||||||||||||||| Sbjct: 64106 agaaaaggatctcacaaaat 64125
>dbj|AB105424.1| Photobacterium damselae subsp. piscicida DNA, genomic contig sequence, clone: contig761 Length = 2304 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 tggcttcaagcatattttct 332 |||||||||||||||||||| Sbjct: 865 tggcttcaagcatattttct 846
>emb|BX855615.5| Zebrafish DNA sequence from clone CH211-134J6, complete sequence Length = 92637 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ttcagaggaaaaccgtatta 491 |||||||||||||||||||| Sbjct: 39337 ttcagaggaaaaccgtatta 39356
>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153517 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 tatttcacggattcttcaac 466 |||||||||||||||||||| Sbjct: 10355 tatttcacggattcttcaac 10374
>gb|AC019115.8| Homo sapiens BAC clone RP11-506G17 from 2, complete sequence Length = 213996 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 caagcatattttcttgtgct 338 |||||||||||||||||||| Sbjct: 188935 caagcatattttcttgtgct 188954
>gb|AF234168.1|AF234168 Dictyostelium discoideum farnesyl diphosphate synthase (Dfps) mRNA, complete cds Length = 1149 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 298 ggttggtgtattgaatggcttcaagcat 325 ||||||||| | |||||||||||||||| Sbjct: 337 ggttggtgtgtcgaatggcttcaagcat 364
>emb|CT009759.12| Mouse DNA sequence from clone RP23-213P21 on chromosome 13, complete sequence Length = 199967 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 532 acagcttcagggcagttgttggat 555 |||||||||||||||| ||||||| Sbjct: 55802 acagcttcagggcagtagttggat 55825
>emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chromosome X, complete sequence Length = 188048 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 532 acagcttcagggcagttgttggat 555 ||||||||| |||||||||||||| Sbjct: 43807 acagcttcaaggcagttgttggat 43784
>dbj|AB049086.1| Youngia japonica YjFPPS1 mRNA for putative FPP synthase 1, partial cds Length = 409 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 331 cttgtgcttgatgatatcatggac 354 |||||||||||||| ||||||||| Sbjct: 8 cttgtgcttgatgacatcatggac 31
>dbj|AB041627.1| Eucommia ulmoides EUFPPS2 mRNA for FPP synthase 2, partial cds Length = 409 Score = 40.1 bits (20), Expect = 8.5 Identities = 98/124 (79%) Strand = Plus / Plus Query: 326 attttcttgtgcttgatgatatcatggacaactcccagacacgacggggccagccttgct 385 |||||||||| |||||||| || ||||| | |||||| ||||| || ||||| || || | Sbjct: 1 attttcttgttcttgatgacattatggatagctcccatacacgccgaggccaaccatgtt 60 Query: 386 ggtttagggtgcctcaggttggccttattgctgtaaacgatgggattatccttcgcaacc 445 |||| || |||| |||| || | ||||| || |||||||| | || |||||||||| Sbjct: 61 ggttcagattgccaaaggtcggtatgattgcagtgaacgatggactaatacttcgcaacc 120 Query: 446 atat 449 |||| Sbjct: 121 atat 124 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,963,032 Number of Sequences: 3902068 Number of extensions: 4963032 Number of successful extensions: 88067 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 87673 Number of HSP's gapped (non-prelim): 367 length of query: 624 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 601 effective length of database: 17,143,297,704 effective search space: 10303121920104 effective search space used: 10303121920104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
