ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63c08 |
|---|---|
| Clone Library Name | barley_pub |
>CERKL_HUMAN (Q49MI3) Ceramide kinase-like protein| Length = 558 Score = 45.1 bits (105), Expect = 2e-04 Identities = 19/50 (38%), Positives = 32/50 (64%) Frame = +3 Query: 468 PQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHAGHAKSL 617 P+ + ++LNP+S + +V++EK EP+ KLAG ++ + GHA SL Sbjct: 166 PKSLKILLNPQSHKKEATQVYYEKVEPLLKLAGIKTDVTIMEYEGHALSL 215
>CERK1_HUMAN (Q8TCT0) Ceramide kinase (EC 2.7.1.138) (Acylsphingosine kinase)| (hCERK) (Lipid kinase 4) (LK4) Length = 537 Score = 43.9 bits (102), Expect = 4e-04 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = +3 Query: 468 PQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHAGHAK 611 P+ +LV +NP G G+ +++ K P+F LA +I+ T HA AK Sbjct: 130 PKHLLVFINPFGGKGQGKRIYERKVAPLFTLASITTDIIVTEHANQAK 177
>CERK1_MOUSE (Q8K4Q7) Ceramide kinase (EC 2.7.1.138) (Acylsphingosine kinase)| (mCERK) Length = 531 Score = 42.7 bits (99), Expect = 9e-04 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = +3 Query: 468 PQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHAGHAK 611 P+ +LV +NP G G+ +++ + P+F LA EI+ T HA AK Sbjct: 130 PKHLLVFINPFGGKGQGKRIYEKTVAPLFTLASITTEIIITEHANQAK 177
>SPHK1_HUMAN (Q9NYA1) Sphingosine kinase 1 (EC 2.7.1.-) (SK 1) (SPK 1)| Length = 384 Score = 41.6 bits (96), Expect = 0.002 Identities = 17/50 (34%), Positives = 29/50 (58%) Frame = +3 Query: 468 PQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHAGHAKSL 617 P R+LV+LNPR G G+++++F +P+ A ++ T HA+ L Sbjct: 14 PCRVLVLLNPRGGKGKALQLFRSHVQPLLAEAEISFTLMLTERRNHAREL 63
>SPHK2_HUMAN (Q9NRA0) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)| Length = 654 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 5/145 (3%) Frame = +3 Query: 198 SVSYNSGVQHFTLHAYPGKKSLFGKTHRVRKDFRFM-ASTLDE----AILWVTCFAEQNI 362 S S + +F ++ YP + G R + FR A+T +E A W T Sbjct: 105 SRSPSDSAAYFCIYTYPRGRR--GARRRATRTFRADGAATYEENRAEAQRWATALT---C 159 Query: 363 YINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRILVILNPRSGHGRSIKVFHEKA 542 + LP P I D L PP R+L+++NP G G + + Sbjct: 160 LLRGLPLPGDGEITPD--------LLPRPP-------RLLLLVNPFGGRGLAWQWCKNHV 204 Query: 543 EPIFKLAGFHMEIVKTTHAGHAKSL 617 P+ AG +++T HA+ L Sbjct: 205 LPMISEAGLSFNLIQTERQNHAREL 229
>YSM3_CAEEL (Q10123) Hypothetical protein F52C9.3| Length = 439 Score = 34.3 bits (77), Expect = 0.31 Identities = 15/51 (29%), Positives = 28/51 (54%) Frame = +3 Query: 468 PQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHAGHAKSLA 620 P+R+ V++N F++ A P+F LAG +++VK + ++LA Sbjct: 67 PKRVFVLVNVEGNSRGCFDQFNKNALPLFHLAGVQVDVVKADNQAQLEALA 117
>SPHK2_MOUSE (Q9JIA7) Sphingosine kinase 2 (EC 2.7.1.-) (SK 2) (SPK 2)| Length = 617 Score = 34.3 bits (77), Expect = 0.31 Identities = 19/66 (28%), Positives = 32/66 (48%) Frame = +3 Query: 420 PLGGVLFDYPPIKSRTPQRILVILNPRSGHGRSIKVFHEKAEPIFKLAGFHMEIVKTTHA 599 PL G P + R P R+L+++NP G G + + + P+ AG +++T Sbjct: 130 PLSGDQEITPELLPRKP-RLLILVNPFGGRGLAWQRCMDHVVPMISEAGLSFNLIQTERQ 188 Query: 600 GHAKSL 617 HA+ L Sbjct: 189 NHAREL 194
>Y1457_METJA (Q58852) Hypothetical protein MJ1457| Length = 135 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 5/67 (7%) Frame = +3 Query: 30 VGFEVYAGKLFFDRKNKSIGVDGNLSSNKKADTTDARLTSKA----LIWGSTVL-SLEDV 194 VGF + G L F RKNK++ N + + D+++ T+ A +I G + ++EDV Sbjct: 21 VGFGLILGYLIFSRKNKTVNGTANRTVVVERDSSNLLGTAAAVAGGVIAGELITDAIEDV 80 Query: 195 ISVSYNS 215 I+ + N+ Sbjct: 81 INNNENN 87
>APLP_LOCMI (Q9U943) Apolipophorins precursor [Contains: Apolipophorin-2| (Apolipophorin II) (apoLp-2); Apolipophorin-1 (Apolipophorin I) (apoLp-1)] Length = 3380 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/69 (26%), Positives = 33/69 (47%) Frame = +3 Query: 324 AILWVTCFAEQNIYINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRILVILNPRS 503 A +V + +N++++V PH S+ D +G P KS IL++L + Sbjct: 3043 AAAYVQACSVENVFVSVPPHCVHCSVNGDAAIDIGQSFSVKVPQKSAD---ILIVLEQVT 3099 Query: 504 GHGRSIKVF 530 G+ ++K F Sbjct: 3100 GNAETVKDF 3108
>GCAA_MOUSE (P01863) Ig gamma-2A chain C region, A allele| Length = 330 Score = 29.3 bits (64), Expect = 10.0 Identities = 31/147 (21%), Positives = 63/147 (42%) Frame = +3 Query: 123 DTTDARLTSKALIWGSTVLSLEDVISVSYNSGVQHFTLHAYPGKKSLFGKTHRVRKDFRF 302 DTT + +T L+ G + +++++NSG +H +P ++ D Sbjct: 17 DTTGSSVTLGCLVKGY----FPEPVTLTWNSGSLSSGVHTFPAV---------LQSDLYT 63 Query: 303 MASTLDEAILWVTCFAEQNIYINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRIL 482 ++S++ + + + Q+I NV HPA+S+ + P G + PP K P + Sbjct: 64 LSSSVT---VTSSTWPSQSITCNVA-HPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLL- 118 Query: 483 VILNPRSGHGRSIKVFHEKAEPIFKLA 563 G S+ +F K + + ++ Sbjct: 119 --------GGPSVFIFPPKIKDVLMIS 137
>CD2AP_MOUSE (Q9JLQ0) CD2-associated protein (Mesenchym-to-epithelium transition| protein with SH3 domains 1) (METS-1) Length = 637 Score = 29.3 bits (64), Expect = 10.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +3 Query: 372 VLPHPATSSIKEDTDAPLGGVLFDYPP 452 + PHP T +IK+ T VLFDY P Sbjct: 95 IQPHPQTKAIKKKTKKRQCKVLFDYSP 121
>SLDA1_GLUOX (Q70JN9) Glycerol dehydrogenase large subunit precursor (EC| 1.1.99.22) (Gluconate/polyol dehydrogenase large subunit) (D-sorbitol dehydrogenase subunit sldA) (SLDH) (D-arabitol dehydrogenase large subunit) (ARDH) Length = 743 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = -3 Query: 611 LRMTSMSSFNYLHVKTCKLKYRFCFFMENFN*PTMSRTRVQYNKYSLRSSGFDWWVIK*N 432 L+ T M + + C++K+R + F P++ + ++Y Y + G DW + + Sbjct: 482 LKETDMWGMSPIDQLFCRIKFRRANYTGEFTPPSVDKPWIEYPGY---NGGSDWGSVSYD 538 Query: 431 PTKG 420 P G Sbjct: 539 PQSG 542
>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 29.3 bits (64), Expect = 10.0 Identities = 25/74 (33%), Positives = 31/74 (41%) Frame = +3 Query: 312 TLDEAILWVTCFAEQNIYINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRILVIL 491 TLD WVT Q I N LP P S + + D P L+ PI+ I L Sbjct: 399 TLDTLEKWVTEIFSQ-IPNNGLPKPNFSHLTDPFDTPAFNKLYRVVPIRKIHALTITWAL 457 Query: 492 NPRSGHGRSIKVFH 533 P+ H R +K H Sbjct: 458 PPQQQHYR-VKPLH 470
>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic| convertase) (NRD convertase) (NRD-C) Length = 1161 Score = 29.3 bits (64), Expect = 10.0 Identities = 25/74 (33%), Positives = 31/74 (41%) Frame = +3 Query: 312 TLDEAILWVTCFAEQNIYINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRILVIL 491 TLD WVT Q I N LP P S + + D P L+ PI+ I L Sbjct: 399 TLDTLEKWVTEIFSQ-IPNNGLPKPNFSHLTDPFDTPAFNKLYRVVPIRKIHALTITWAL 457 Query: 492 NPRSGHGRSIKVFH 533 P+ H R +K H Sbjct: 458 PPQQQHYR-VKPLH 470
>SLDA2_GLUOX (Q8KIL1) Glycerol dehydrogenase large subunit precursor (EC| 1.1.99.22) (Gluconate/polyol dehydrogenase large subunit) (D-sorbitol dehydrogenase subunit sldA) (SLDH) (D-arabitol dehydrogenase large subunit) (ARDH) Length = 740 Score = 29.3 bits (64), Expect = 10.0 Identities = 15/64 (23%), Positives = 31/64 (48%) Frame = -3 Query: 611 LRMTSMSSFNYLHVKTCKLKYRFCFFMENFN*PTMSRTRVQYNKYSLRSSGFDWWVIK*N 432 L+ T M + + C++K+R ++ F P++ + ++Y Y + G DW + + Sbjct: 478 LKETDMWGMSPIDQLFCRIKFRRANYVGEFTPPSVDKPWIEYPGY---NGGSDWGSMSYD 534 Query: 431 PTKG 420 P G Sbjct: 535 PQSG 538
>CRKL_HUMAN (P46109) Crk-like protein| Length = 303 Score = 29.3 bits (64), Expect = 10.0 Identities = 17/69 (24%), Positives = 32/69 (46%) Frame = +3 Query: 63 FDRKNKSIGVDGNLSSNKKADTTDARLTSKALIWGSTVLSLEDVISVSYNSGVQHFTLHA 242 FD ++S G +S + + L+ S+ + V+SVS NS V H+ +++ Sbjct: 6 FDSSDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINS 65 Query: 243 YPGKKSLFG 269 P ++ G Sbjct: 66 LPNRRFKIG 74
>Y1266_ARCFU (O29002) Hypothetical protein AF1266| Length = 169 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +1 Query: 160 YGVPLYSALRMSSLYP--IILVSNILLYMHILVRSLYLERHIEFGR 291 +GV +++ M + P + VS +LLY + RS L+ H FGR Sbjct: 86 FGVGSFTSALMLFVLPTAFLFVSLLLLYWWFVTRSYLLDMHTNFGR 131
>GCAM_MOUSE (P01865) Ig gamma-2A chain C region, membrane-bound form| Length = 398 Score = 29.3 bits (64), Expect = 10.0 Identities = 31/147 (21%), Positives = 63/147 (42%) Frame = +3 Query: 123 DTTDARLTSKALIWGSTVLSLEDVISVSYNSGVQHFTLHAYPGKKSLFGKTHRVRKDFRF 302 DTT + +T L+ G + +++++NSG +H +P ++ D Sbjct: 16 DTTGSSVTLGCLVKGY----FPEPVTLTWNSGSLSSGVHTFPAV---------LQSDLYT 62 Query: 303 MASTLDEAILWVTCFAEQNIYINVLPHPATSSIKEDTDAPLGGVLFDYPPIKSRTPQRIL 482 ++S++ + + + Q+I NV HPA+S+ + P G + PP K P + Sbjct: 63 LSSSVT---VTSSTWPSQSITCNVA-HPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLL- 117 Query: 483 VILNPRSGHGRSIKVFHEKAEPIFKLA 563 G S+ +F K + + ++ Sbjct: 118 --------GGPSVFIFPPKIKDVLMIS 136
>PTDSR_RAT (Q6AYK2) Protein PTDSR| Length = 403 Score = 29.3 bits (64), Expect = 10.0 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +3 Query: 300 FMASTLDEAILWV--TCFAEQNIYINVLPHPATSSIKEDTDAP--LGGVLFDYPPIKSRT 467 +M ST D++ L++ + + E HP + ED P LF Y K R Sbjct: 120 YMESTRDDSPLYIFDSSYGE---------HPKRRKLLEDYKVPKFFTDDLFQYAGEKRRP 170 Query: 468 PQRILVILNPRSGHG 512 P R V+ PRSG G Sbjct: 171 PYRWFVMGPPRSGTG 185
>PTDSR_PONPY (Q5R6G2) Protein PTDSR| Length = 403 Score = 29.3 bits (64), Expect = 10.0 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +3 Query: 300 FMASTLDEAILWV--TCFAEQNIYINVLPHPATSSIKEDTDAP--LGGVLFDYPPIKSRT 467 +M ST D++ L++ + + E HP + ED P LF Y K R Sbjct: 120 YMESTRDDSPLYIFDSSYGE---------HPKRRKLLEDYKVPKFFTDDLFQYAGEKRRP 170 Query: 468 PQRILVILNPRSGHG 512 P R V+ PRSG G Sbjct: 171 PYRWFVMGPPRSGTG 185
>PTDSR_MOUSE (Q9ERI5) Protein PTDSR (Phosphatidylserine receptor) (Apoptotic| cell clearance receptor PtdSerR) Length = 403 Score = 29.3 bits (64), Expect = 10.0 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +3 Query: 300 FMASTLDEAILWV--TCFAEQNIYINVLPHPATSSIKEDTDAP--LGGVLFDYPPIKSRT 467 +M ST D++ L++ + + E HP + ED P LF Y K R Sbjct: 120 YMESTRDDSPLYIFDSSYGE---------HPKRRKLLEDYKVPKFFTDDLFQYAGEKRRP 170 Query: 468 PQRILVILNPRSGHG 512 P R V+ PRSG G Sbjct: 171 PYRWFVMGPPRSGTG 185
>PTDSR_HUMAN (Q6NYC1) Protein PTDSR (Phosphatidylserine receptor)| Length = 403 Score = 29.3 bits (64), Expect = 10.0 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%) Frame = +3 Query: 300 FMASTLDEAILWV--TCFAEQNIYINVLPHPATSSIKEDTDAP--LGGVLFDYPPIKSRT 467 +M ST D++ L++ + + E HP + ED P LF Y K R Sbjct: 120 YMESTRDDSPLYIFDSSYGE---------HPKRRKLLEDYKVPKFFTDDLFQYAGEKRRP 170 Query: 468 PQRILVILNPRSGHG 512 P R V+ PRSG G Sbjct: 171 PYRWFVMGPPRSGTG 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,297,357 Number of Sequences: 219361 Number of extensions: 2044650 Number of successful extensions: 4918 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4787 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4916 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
