ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62n08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosom... 44 0.51
2emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 i... 44 0.51
3emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chrom... 44 0.51
4gb|BC047772.2| Homo sapiens tuberous sclerosis 1, transcript var... 42 2.0
5emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on ch... 42 2.0
6emb|AL390125.23| Human DNA sequence from clone RP11-43O2 on chro... 42 2.0
7emb|AL008628.1|HS140C12 Human DNA sequence from clone RP1-140C12... 42 2.0
8gb|AY991500.1| Uncultured bacterium clone C10_B16 16S ribosomal ... 42 2.0
9gb|BC070032.1| Homo sapiens tuberous sclerosis 1, transcript var... 42 2.0
10emb|CR622174.1| full-length cDNA clone CS0DD001YO24 of Neuroblas... 42 2.0
11gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, co... 42 2.0
12gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, comp... 42 2.0
13ref|NM_001008567.1| Homo sapiens tuberous sclerosis 1 (TSC1), tr... 42 2.0
14gb|AC002096.1|AC002096 Homo sapiens chromosome 9q34, clone 63G10... 42 2.0
15ref|NM_007111.3| Homo sapiens transcription factor Dp-1 (TFDP1),... 40 8.0
16ref|NM_101002.1| Arabidopsis thaliana unknown protein AT1G11290 ... 40 8.0
17ref|XM_509749.1| PREDICTED: Pan troglodytes similar to Transcrip... 40 8.0
18gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, co... 40 8.0
19gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, com... 40 8.0
20gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 40 8.0
21gb|AC145748.4| Mus musculus BAC clone RP23-31L10 from chromosome... 40 8.0
22ref|NM_198488.2| Homo sapiens family with sequence similarity 83... 40 8.0
23gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 8.0
24gb|AF370424.1| Homo sapiens PP2121 mRNA, complete cds 40 8.0
25emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in ... 40 8.0
26emb|AJ879636.1| Bos taurus microsatellite DNA, clone RP42-493P3,... 40 8.0
27emb|CT009698.8| Mouse DNA sequence from clone RP23-117P22 on chr... 40 8.0
28gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosom... 40 8.0
29gb|AC007259.4| Arabidopsis thaliana chromosome I BAC T28P6 genom... 40 8.0
30gb|U16344.1|CPITSLRE01 Gallus gallus protein kinase gene (cPITSL... 40 8.0
31gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome ... 40 8.0
32gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) ge... 40 8.0
33gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence 40 8.0
34gb|AC005228.1| Homo sapiens PAC clone RP5-1100A7 from 7, complet... 40 8.0
35gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Can... 40 8.0
36emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in... 40 8.0
37emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 o... 40 8.0
38gb|BC033256.1| Homo sapiens family with sequence similarity 83, ... 40 8.0
39gb|BC007264.1| Homo sapiens family with sequence similarity 83, ... 40 8.0
40emb|AL590072.7| Human DNA sequence from clone RP11-154J12 on chr... 40 8.0
41emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on ch... 40 8.0
42emb|AL161910.19| Human DNA sequence from clone RP11-260L6 on chr... 40 8.0
43emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chrom... 40 8.0
44gb|AC105219.6| Homo sapiens chromosome 8, clone RP11-429J17, com... 40 8.0
45ref|NM_001030871.1| Gallus gallus similar to protein kinase (LOC... 40 8.0
46emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 8.0
47emb|CR628336.1| Legionella pneumophila str. Paris complete genome 40 8.0
48gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome... 40 8.0
49gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosom... 40 8.0
50emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 i... 40 8.0
51emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 i... 40 8.0
52emb|CR614715.1| full-length cDNA clone CS0DJ009YD20 of T cells (... 40 8.0
53emb|CR603875.1| full-length cDNA clone CS0DI075YN08 of Placenta ... 40 8.0
54gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, comp... 40 8.0
55emb|CR390730.1| Gallus gallus finished cDNA, clone ChEST631g4 40 8.0
56emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in ... 40 8.0
57dbj|AK043560.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 8.0
58emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, c... 40 8.0
59gb|AC079150.3| Homo sapiens BAC clone RP11-155F11 from 2, comple... 40 8.0
60gb|AC091021.8| Homo sapiens chromosome 18, clone RP11-786F14, co... 40 8.0
61gb|AC021302.11| Homo sapiens chromosome 18, clone RP11-203G13, c... 40 8.0
62gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Can... 40 8.0
63ref|XM_555966.1| Anopheles gambiae str. PEST ENSANGP00000026017 ... 40 8.0
64gb|AC154780.2| Mus musculus BAC clone RP24-462E4 from 13, comple... 40 8.0
65gb|AE001439.1| Helicobacter pylori J99, complete genome 40 8.0
66gb|BC011685.2| Homo sapiens transcription factor Dp-1, mRNA (cDN... 40 8.0
67gb|AE000511.1| Helicobacter pylori 26695, complete genome 40 8.0
68gb|AY609680.1| Sus scrofa clone Clu_25225.scr.msk.p1.Contig4, mR... 40 8.0
69emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.0
70gb|AC153021.2| Mus musculus 10 BAC RP23-37G3 (Roswell Park Cance... 40 8.0
71gb|L23959.1|HUMDP1A Homo sapiens E2F-related transcription facto... 40 8.0 
>gb|AC159254.2| Mus musculus BAC clone RP24-112C23 from chromosome 12, complete
             sequence
          Length = 163438

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 132   cttttcccaggggaaaagaaac 153
             ||||||||||||||||||||||
Sbjct: 86881 cttttcccaggggaaaagaaac 86902
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>emb|CR855307.18| Zebrafish DNA sequence from clone DKEYP-121D2 in linkage group 14,
              complete sequence
          Length = 167962

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 411    acagaaacagtctcaacatcaa 432
              ||||||||||||||||||||||
Sbjct: 167047 acagaaacagtctcaacatcaa 167068
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>emb|CT571252.9| Mouse DNA sequence from clone RP24-91J7 on chromosome 12, complete
              sequence
          Length = 189925

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 132    cttttcccaggggaaaagaaac 153
              ||||||||||||||||||||||
Sbjct: 132721 cttttcccaggggaaaagaaac 132742
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>gb|BC047772.2| Homo sapiens tuberous sclerosis 1, transcript variant 2, mRNA (cDNA
            clone IMAGE:5785462), complete cds
          Length = 1702

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 530  tccatgatattagcaaagaaa 550
            |||||||||||||||||||||
Sbjct: 1361 tccatgatattagcaaagaaa 1381
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>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the
              TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for
              chromosome 9 open reading frame 9 protein, the 5' end of
              gene FLJ32704, two novel gene, the 5' end of a novel gene
              and three CpG islands, complete sequence
          Length = 199113

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 530    tccatgatattagcaaagaaa 550
              |||||||||||||||||||||
Sbjct: 155177 tccatgatattagcaaagaaa 155157
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>emb|AL390125.23| Human DNA sequence from clone RP11-43O2 on chromosome 6, complete
              sequence
          Length = 140782

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 145    aaaagaaaccaaatctctctcaaat 169
              ||||||||| |||||||||||||||
Sbjct: 111461 aaaagaaactaaatctctctcaaat 111437
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>emb|AL008628.1|HS140C12 Human DNA sequence from clone RP1-140C12 on chromosome 6q26-27
             ContaiContains the 3' end of the gene for KIAA1838 and 2
             CpG islands, complete sequence
          Length = 143096

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 62    tatttgtcaaattgtatagca 82
             |||||||||||||||||||||
Sbjct: 59403 tatttgtcaaattgtatagca 59423
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>gb|AY991500.1| Uncultured bacterium clone C10_B16 16S ribosomal RNA gene, partial
           sequence
          Length = 1276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 476 tcatgtttggtcaacttcttccctg 500
           |||||||| ||||||||||||||||
Sbjct: 417 tcatgttttgtcaacttcttccctg 393
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>gb|BC070032.1| Homo sapiens tuberous sclerosis 1, transcript variant 2, mRNA (cDNA
            clone IMAGE:5273541), complete cds
          Length = 1751

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 530  tccatgatattagcaaagaaa 550
            |||||||||||||||||||||
Sbjct: 1389 tccatgatattagcaaagaaa 1409
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>emb|CR622174.1| full-length cDNA clone CS0DD001YO24 of Neuroblastoma Cot
            50-normalized of Homo sapiens (human)
          Length = 1490

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 530  tccatgatattagcaaagaaa 550
            |||||||||||||||||||||
Sbjct: 1330 tccatgatattagcaaagaaa 1350
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>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence
          Length = 187574

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   ttgattttttccctgatgtaa 237
             |||||||||||||||||||||
Sbjct: 94238 ttgattttttccctgatgtaa 94218
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>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence
          Length = 161775

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    ttgattttttccctgatgtaa 237
              |||||||||||||||||||||
Sbjct: 109339 ttgattttttccctgatgtaa 109319
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>ref|NM_001008567.1| Homo sapiens tuberous sclerosis 1 (TSC1), transcript variant 2, mRNA
          Length = 1729

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 530  tccatgatattagcaaagaaa 550
            |||||||||||||||||||||
Sbjct: 1388 tccatgatattagcaaagaaa 1408
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>gb|AC002096.1|AC002096 Homo sapiens chromosome 9q34, clone 63G10, complete sequence
          Length = 39805

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 530   tccatgatattagcaaagaaa 550
             |||||||||||||||||||||
Sbjct: 37960 tccatgatattagcaaagaaa 37940
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>ref|NM_007111.3| Homo sapiens transcription factor Dp-1 (TFDP1), mRNA
          Length = 2385

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 aacagaaacagtctcaacatcaag 433
           |||||||||||||||||| |||||
Sbjct: 862 aacagaaacagtctcaacttcaag 885
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>ref|NM_101002.1| Arabidopsis thaliana unknown protein AT1G11290 mRNA, complete cds
          Length = 2430

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 aagaaaccaaatctctctca 166
           ||||||||||||||||||||
Sbjct: 610 aagaaaccaaatctctctca 591
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>ref|XM_509749.1| PREDICTED: Pan troglodytes similar to Transcription factor Dp-1 (E2F
            dimerization partner 1) (DRTF1-polypeptide-1) (DRTF1)
            (LOC452682), mRNA
          Length = 3882

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 410  aacagaaacagtctcaacatcaag 433
            |||||||||||||||||| |||||
Sbjct: 2423 aacagaaacagtctcaacttcaag 2446
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>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence
          Length = 166451

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     tctcctccttccctccccac 46
              ||||||||||||||||||||
Sbjct: 101026 tctcctccttccctccccac 101045
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>gb|AC130658.36| Mus musculus chromosome 1, clone RP23-309D5, complete sequence
          Length = 184094

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   aaaagaaaccaaatctctct 164
             ||||||||||||||||||||
Sbjct: 78029 aaaagaaaccaaatctctct 78048
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     tttcttttgattttttccct 230
               ||||||||||||||||||||
Sbjct: 2089296 tttcttttgattttttccct 2089315
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>gb|AC145748.4| Mus musculus BAC clone RP23-31L10 from chromosome 5, complete sequence
          Length = 220208

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    tgctctctggacacttcctt 316
              ||||||||||||||||||||
Sbjct: 219473 tgctctctggacacttcctt 219454
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>ref|NM_198488.2| Homo sapiens family with sequence similarity 83, member H (FAM83H),
            mRNA
          Length = 5604

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   ggtctcctccttccctcccc 44
            ||||||||||||||||||||
Sbjct: 4341 ggtctcctccttccctcccc 4360
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    gaacatcgtcgctggtgaac 471
              ||||||||||||||||||||
Sbjct: 415381 gaacatcgtcgctggtgaac 415400
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>gb|AF370424.1| Homo sapiens PP2121 mRNA, complete cds
          Length = 2244

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 25  ggtctcctccttccctcccc 44
           ||||||||||||||||||||
Sbjct: 979 ggtctcctccttccctcccc 998
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>emb|BX537295.7| Zebrafish DNA sequence from clone DKEY-21O10 in linkage group 1,
            complete sequence
          Length = 165366

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  catgatattagcaaagaaaa 551
            ||||||||||||||||||||
Sbjct: 6879 catgatattagcaaagaaaa 6860
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>emb|AJ879636.1| Bos taurus microsatellite DNA, clone RP42-493P3, subclone MS2
          Length = 884

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 413 agaaacagtctcaacatcaa 432
           ||||||||||||||||||||
Sbjct: 417 agaaacagtctcaacatcaa 398
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>emb|CT009698.8| Mouse DNA sequence from clone RP23-117P22 on chromosome 16, complete
              sequence
          Length = 210485

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    caggggaaaagaaaccaaat 158
              ||||||||||||||||||||
Sbjct: 129089 caggggaaaagaaaccaaat 129070
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>gb|AC131794.3| Mus musculus BAC clone RP24-486P14 from chromosome 9, complete sequence
          Length = 166272

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 557    cttggaaagtcaaggtcaga 576
              ||||||||||||||||||||
Sbjct: 129193 cttggaaagtcaaggtcaga 129174
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>gb|AC007259.4| Arabidopsis thaliana chromosome I BAC T28P6 genomic sequence, complete
             sequence
          Length = 97146

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   aagaaaccaaatctctctca 166
             ||||||||||||||||||||
Sbjct: 24806 aagaaaccaaatctctctca 24787
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>gb|U16344.1|CPITSLRE01 Gallus gallus protein kinase gene (cPITSLRE) gene, exons 1, 2 and 3
          Length = 1224

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 547 gaaaaggattcttggaaagt 566
           ||||||||||||||||||||
Sbjct: 290 gaaaaggattcttggaaagt 309
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>gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome 5, complete sequence
          Length = 195640

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 297   tgctctctggacacttcctt 316
             ||||||||||||||||||||
Sbjct: 74398 tgctctctggacacttcctt 74417
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>gb|AF550129.1| Homo sapiens transcription factor Dp-1 (TFDP1) gene, partial cds
          Length = 55319

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 410   aacagaaacagtctcaacatcaag 433
             |||||||||||||||||| |||||
Sbjct: 47409 aacagaaacagtctcaacttcaag 47432
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>gb|AC091316.2| Sus scrofa clone RP44-479G12, complete sequence
          Length = 155724

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    ctcctccttccctccccaca 47
             ||||||||||||||||||||
Sbjct: 47098 ctcctccttccctccccaca 47117
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>gb|AC005228.1| Homo sapiens PAC clone RP5-1100A7 from 7, complete sequence
          Length = 102008

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  tttcttttgattttttccct 230
            ||||||||||||||||||||
Sbjct: 5389 tttcttttgattttttccct 5408
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>gb|AC159503.10| Mus musculus 10 BAC RP24-293I2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 199258

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ggcacgaggctcatcaccat 24
              ||||||||||||||||||||
Sbjct: 157529 ggcacgaggctcatcaccat 157548
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>emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in linkage group 17,
             complete sequence
          Length = 113259

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 258   ttgcaactgtattaggattattaa 281
             ||||| ||||||||||||||||||
Sbjct: 26093 ttgcacctgtattaggattattaa 26070
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>emb|Z97053.2|HS179M20 Human DNA sequence from clone RP1-179M20 on chromosome 20 Contains the
             3' end of the C20orf121 gene for chromosome 20 open
             reading frame 121, the TDE1 gene for tumour differentially
             expressed 1, the PKIG gene for protein kinase
             (cAMP-dependent, catalytic) inhibitor gamma, the 3' end of
             the ADA gene for adenosine deaminase and two CpG islands,
             complete sequence
          Length = 147708

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   gtcaaggtcagaataattag 584
             ||||||||||||||||||||
Sbjct: 36434 gtcaaggtcagaataattag 36453
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>gb|BC033256.1| Homo sapiens family with sequence similarity 83, member H, mRNA (cDNA
            clone IMAGE:5455669), partial cds
          Length = 2960

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   ggtctcctccttccctcccc 44
            ||||||||||||||||||||
Sbjct: 1694 ggtctcctccttccctcccc 1713
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>gb|BC007264.1| Homo sapiens family with sequence similarity 83, member H, mRNA (cDNA
            clone IMAGE:3138324), containing frame-shift errors
          Length = 2508

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 25   ggtctcctccttccctcccc 44
            ||||||||||||||||||||
Sbjct: 1244 ggtctcctccttccctcccc 1263
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>emb|AL590072.7| Human DNA sequence from clone RP11-154J12 on chromosome 10, complete
             sequence
          Length = 112445

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   ctctggacacttccttgatt 320
             ||||||||||||||||||||
Sbjct: 21962 ctctggacacttccttgatt 21943
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>emb|AL442125.13| Human DNA sequence from clone RP11-230F18 on chromosome 13 Contains the
              5' end of the gene for FLJ10704 (FLJ20092), a  novel gene,
              a novel gene (FLJ20623), the TFDP1 gene for transcription
              factor Dp-1 (DP-1, DRTF1) and 5 CpG islands, complete
              sequence
          Length = 184889

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 410    aacagaaacagtctcaacatcaag 433
              |||||||||||||||||| |||||
Sbjct: 170277 aacagaaacagtctcaacttcaag 170300
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>emb|AL161910.19| Human DNA sequence from clone RP11-260L6 on chromosome 9 Contains the
             GADD45G gene for growth arrest and DNA-damage-inducible,
             gamma (CR6, DDIT2, GRP17) and a CpG island, complete
             sequence
          Length = 171025

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ggtctcctccttccctcccc 44
             ||||||||||||||||||||
Sbjct: 58605 ggtctcctccttccctcccc 58586
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>emb|AL157812.5| Human DNA sequence from clone RP11-14B2 on chromosome 13q21.1-21.3
             Contains GSSs and STSs, complete sequence
          Length = 166971

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 205   catcgatttcttttgattttttcc 228
             |||||||||||||| |||||||||
Sbjct: 62775 catcgatttcttttcattttttcc 62798
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>gb|AC105219.6| Homo sapiens chromosome 8, clone RP11-429J17, complete sequence
          Length = 177816

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 25     ggtctcctccttccctcccc 44
              ||||||||||||||||||||
Sbjct: 103606 ggtctcctccttccctcccc 103625
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>ref|NM_001030871.1| Gallus gallus similar to protein kinase (LOC419406), mRNA
          Length = 3259

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 547 gaaaaggattcttggaaagt 566
           ||||||||||||||||||||
Sbjct: 132 gaaaaggattcttggaaagt 151
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     tttcttttgattttttccct 230
               ||||||||||||||||||||
Sbjct: 2047718 tttcttttgattttttccct 2047737
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     tttcttttgattttttccct 230
               ||||||||||||||||||||
Sbjct: 2074505 tttcttttgattttttccct 2074524
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>gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome 17, complete sequence
          Length = 252045

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 536    atattagcaaagaaaaggattctt 559
              |||||||| |||||||||||||||
Sbjct: 115317 atattagccaagaaaaggattctt 115294
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>gb|AC153012.4| Mus musculus BAC clone RP23-302F19 from chromosome 9, complete sequence
          Length = 196764

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   cttggaaagtcaaggtcaga 576
             ||||||||||||||||||||
Sbjct: 97958 cttggaaagtcaaggtcaga 97939
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>emb|BX294387.11| Zebrafish DNA sequence from clone DKEY-267L16 in linkage group 9,
             complete sequence
          Length = 167582

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atatttgtcaaattgtatag 80
             ||||||||||||||||||||
Sbjct: 26882 atatttgtcaaattgtatag 26901
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>emb|BX323579.20| Zebrafish DNA sequence from clone DKEYP-79E11 in linkage group 14,
             complete sequence
          Length = 120579

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   aaaccaaatctctctcaaat 169
             ||||||||||||||||||||
Sbjct: 82162 aaaccaaatctctctcaaat 82181
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>emb|CR614715.1| full-length cDNA clone CS0DJ009YD20 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 1767

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 aacagaaacagtctcaacatcaag 433
           |||||||||||||||||| |||||
Sbjct: 10  aacagaaacagtctcaacttcaag 33
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>emb|CR603875.1| full-length cDNA clone CS0DI075YN08 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1362

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 aacagaaacagtctcaacatcaag 433
           |||||||||||||||||| |||||
Sbjct: 333 aacagaaacagtctcaacttcaag 356
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>gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, complete sequence
          Length = 173450

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     accatggtctcctccttccc 39
              ||||||||||||||||||||
Sbjct: 148314 accatggtctcctccttccc 148333
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>emb|CR390730.1| Gallus gallus finished cDNA, clone ChEST631g4
          Length = 623

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 547 gaaaaggattcttggaaagt 566
           ||||||||||||||||||||
Sbjct: 112 gaaaaggattcttggaaagt 131
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>emb|BX323450.8| Zebrafish DNA sequence from clone RP71-40N14 in linkage group 17,
             complete sequence
          Length = 178920

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    atatttgtcaaattgtatag 80
             ||||||||||||||||||||
Sbjct: 88694 atatttgtcaaattgtatag 88713
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>dbj|AK043560.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830008A03
           product:unclassifiable, full insert sequence
          Length = 2254

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 tgctctctggacacttcctt 316
           ||||||||||||||||||||
Sbjct: 706 tgctctctggacacttcctt 687
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>emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, complete sequence
          Length = 141754

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   aaaccaaatctctctcaaat 169
             ||||||||||||||||||||
Sbjct: 17305 aaaccaaatctctctcaaat 17324
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>gb|AC079150.3| Homo sapiens BAC clone RP11-155F11 from 2, complete sequence
          Length = 174782

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ggaatctctcaccttttccc 139
             ||||||||||||||||||||
Sbjct: 11239 ggaatctctcaccttttccc 11258
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>gb|AC091021.8| Homo sapiens chromosome 18, clone RP11-786F14, complete sequence
          Length = 196622

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 143    ggaaaagaaaccaaatctct 162
              ||||||||||||||||||||
Sbjct: 110065 ggaaaagaaaccaaatctct 110046
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>gb|AC021302.11| Homo sapiens chromosome 18, clone RP11-203G13, complete sequence
          Length = 168535

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ggaaaagaaaccaaatctct 162
             ||||||||||||||||||||
Sbjct: 26125 ggaaaagaaaccaaatctct 26106
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>gb|AC153911.5| Mus musculus 10 BAC RP23-182J19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 219859

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      ggcacgaggctcatcaccat 24
              ||||||||||||||||||||
Sbjct: 108252 ggcacgaggctcatcaccat 108233
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>ref|XM_555966.1| Anopheles gambiae str. PEST ENSANGP00000026017
           (ENSANGG00000024971), partial mRNA
          Length = 2724

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 478 atgtttggtcaacttcttcc 497
           ||||||||||||||||||||
Sbjct: 807 atgtttggtcaacttcttcc 826
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>gb|AC154780.2| Mus musculus BAC clone RP24-462E4 from 13, complete sequence
          Length = 161998

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tctcctccttccctccccac 46
             ||||||||||||||||||||
Sbjct: 84990 tctcctccttccctccccac 85009
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>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     agcaagcaaattagggaatt 98
              ||||||||||||||||||||
Sbjct: 381577 agcaagcaaattagggaatt 381558
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>gb|BC011685.2| Homo sapiens transcription factor Dp-1, mRNA (cDNA clone MGC:19534
           IMAGE:4111289), complete cds
          Length = 2385

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 aacagaaacagtctcaacatcaag 433
           |||||||||||||||||| |||||
Sbjct: 862 aacagaaacagtctcaacttcaag 885
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>gb|AE000511.1| Helicobacter pylori 26695, complete genome
          Length = 1667867

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      agcaagcaaattagggaatt 98
               ||||||||||||||||||||
Sbjct: 1134745 agcaagcaaattagggaatt 1134764
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>gb|AY609680.1| Sus scrofa clone Clu_25225.scr.msk.p1.Contig4, mRNA sequence
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    attcggcacgaggctcatca 20
            ||||||||||||||||||||
Sbjct: 1100 attcggcacgaggctcatca 1081
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     ctctggacactttgtggaga 354
               ||||||||||||||||||||
Sbjct: 1083417 ctctggacactttgtggaga 1083436
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>gb|AC153021.2| Mus musculus 10 BAC RP23-37G3 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 187132

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 5    ggcacgaggctcatcaccat 24
            ||||||||||||||||||||
Sbjct: 4330 ggcacgaggctcatcaccat 4349
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>gb|L23959.1|HUMDP1A Homo sapiens E2F-related transcription factor (DP-1) mRNA, complete
           cds
          Length = 1440

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 410 aacagaaacagtctcaacatcaag 433
           |||||||||||||||||| |||||
Sbjct: 687 aacagaaacagtctcaacttcaag 710


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,226,186
Number of Sequences: 3902068
Number of extensions: 6226186
Number of successful extensions: 147893
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147606
Number of HSP's gapped (non-prelim): 287
length of query: 585
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 562
effective length of database: 17,143,297,704
effective search space: 9634533309648
effective search space used: 9634533309648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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