Clone Name | bah63c07 |
---|---|
Clone Library Name | barley_pub |
>gb|L36959.1|BLYCA Hordeum vulgare carbonic anhydrase mRNA, complete cds Length = 1529 Score = 1164 bits (587), Expect = 0.0 Identities = 601/608 (98%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 936 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 996 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 1056 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 1116 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 1176 Query: 302 cactacgacttcgtctccggcaagttcgaaacatgggagcagtaaatcttccccaccggt 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1177 cactacgacttcgtctccggcaagttcgaaacatgggagcagtaaatcttccccaccggt 1236 Query: 362 taactccgacatatacaaacgtacatatatcaagatatcgtccgatcgatgtgaatgcaa 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 taactccgacatatacaaacgtacatatatcaagatatcgtccgatcgatgtgaatgcaa 1296 Query: 422 tgccatgggagtgcgtacccgttattgtccagtactggatgccggatggcccgatgtgaa 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 tgccatgggagtgcgtacccgttattgtccagtactggatgccggatggcccgatgtgaa 1356 Query: 482 tttgccataagcaatagaaccnnnnnnncttcaccattttctgacgaggaattgtactgc 541 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1357 tttgccataagcaatagaacctttttttcttcaccattttctgacgaggaattgtactgc 1416 Query: 542 tatgtgatgcataatttgatcgtcttgtgatcgaaagacatcatatataagtttaatata 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1417 tatgtgatgcataatttgatcgtcttgtgatcgaaagacatcatatataagtttaatata 1476 Query: 602 atattttc 609 |||||||| Sbjct: 1477 atattttc 1484
>ref|NM_192260.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 819 Score = 339 bits (171), Expect = 6e-90 Identities = 285/323 (88%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 475 gccgtctgcgccctcaaggtcgaactcatcgtggtgattggccacagccgctgcggtgga 534 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| ||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 535 atcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtcgaggac 594 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| ||||| Sbjct: 595 tgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcgctgcct 654 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||| ||| || || |||||||||||||||| ||| ||||| |||||||| Sbjct: 655 ttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggagaacctc 714 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct: 715 aagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtcggcggc 774 Query: 302 cactacgacttcgtctccggcaa 324 ||||||||||||||||||||||| Sbjct: 775 cactacgacttcgtctccggcaa 797
>dbj|AK099825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102G17, full insert sequence Length = 1163 Score = 339 bits (171), Expect = 6e-90 Identities = 285/323 (88%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 525 gccgtctgcgccctcaaggtcgaactcatcgtggtgattggccacagccgctgcggtgga 584 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| ||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 585 atcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtcgaggac 644 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| ||||| Sbjct: 645 tgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcgctgcct 704 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||| ||| || || |||||||||||||||| ||| ||||| |||||||| Sbjct: 705 ttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggagaacctc 764 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct: 765 aagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtcggcggc 824 Query: 302 cactacgacttcgtctccggcaa 324 ||||||||||||||||||||||| Sbjct: 825 cactacgacttcgtctccggcaa 847 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 1078 tgatgcataatttgatcgcagtgtgatcaaaagacatca 1116
>dbj|AK060890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B12, full insert sequence Length = 1165 Score = 339 bits (171), Expect = 6e-90 Identities = 285/323 (88%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 524 gccgtctgcgccctcaaggtcgaactcatcgtggtgattggccacagccgctgcggtgga 583 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| ||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 584 atcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtcgaggac 643 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| ||||| Sbjct: 644 tgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcgctgcct 703 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||| ||| || || |||||||||||||||| ||| ||||| |||||||| Sbjct: 704 ttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggagaacctc 763 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct: 764 aagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtcggcggc 823 Query: 302 cactacgacttcgtctccggcaa 324 ||||||||||||||||||||||| Sbjct: 824 cactacgacttcgtctccggcaa 846 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 1077 tgatgcataatttgatcgcagtgtgatcaaaagacatca 1115
>gb|AF182806.1|AF182806 Oryza sativa carbonic anhydrase 3 mRNA, complete cds Length = 1169 Score = 339 bits (171), Expect = 6e-90 Identities = 285/323 (88%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 519 gccgtctgcgccctcaaggtcgaactcatcgtggtgattggccacagccgctgcggtgga 578 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| ||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 579 atcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtcgaggac 638 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| ||||| Sbjct: 639 tgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcgctgcct 698 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||| ||| || || |||||||||||||||| ||| ||||| |||||||| Sbjct: 699 ttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggagaacctc 758 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct: 759 aagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtcggcggc 818 Query: 302 cactacgacttcgtctccggcaa 324 ||||||||||||||||||||||| Sbjct: 819 cactacgacttcgtctccggcaa 841
>gb|U08404.1|OSU08404 Oryza sativa chloroplast carbonic anhydrase mRNA, complete cds Length = 1148 Score = 339 bits (171), Expect = 6e-90 Identities = 285/323 (88%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 510 gccgtctgcgccctcaaggtcgaactcatcgtggtgattggccacagccgctgcggtgga 569 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| ||||||||||| ||| ||||||||||||||||| |||||| Sbjct: 570 atcaaggccctcctctcactcaaggatggagcaccagactccttccacttcgtcgaggac 629 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||| ||| ||||| |||||||||||||| ||||| ||| |||||| ||||| Sbjct: 630 tgggtcaggaccggtttccccgccaagaagaaggttcagaccgagcacgcctcgctgcct 689 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||| ||| || || |||||||||||||||| ||| ||||| |||||||| Sbjct: 690 ttcgatgaccaatgcgccatcttggagaaggaggccgtgaaccaatccctggagaacctc 749 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||| Sbjct: 750 aagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcgtcggcggc 809 Query: 302 cactacgacttcgtctccggcaa 324 ||||||||||||||||||||||| Sbjct: 810 cactacgacttcgtctccggcaa 832 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 1063 tgatgcataatttgatcgcagtgtgatcaaaagacatca 1101
>gb|AY109272.1| Zea mays PCO064414 mRNA sequence Length = 978 Score = 222 bits (112), Expect = 1e-54 Identities = 268/320 (83%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||| ||||| |||||||| |||||| ||||||| || ||||||||| |||||||||| Sbjct: 400 gccgtgtgcgccctcaaggtggaggtcctcgtggtcatcggccacagctgctgcggtggc 459 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 ||| ||| |||||||| ||| |||| || ||| |||| |||||||||||| ||| || Sbjct: 460 atccgggcgctgctctccctccaggacggtgcacccgacaacttccacttcgtcgagaac 519 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 ||||||| |||||| ||||| |||||| |||||| ||| ||| ||||||| |||| Sbjct: 520 tgggtcaagatcggcttccctgccaaggtcaaggtgaagaaagagcacgcctccgtgccc 579 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||||||| || ||||||||||||||||||| ||||||||||| |||||||| Sbjct: 580 ttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtccctggagaacctc 639 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 ||||||||| |||||| |||| || || |||| || ||||||||||| ||||||| | Sbjct: 640 aagacctaccccttcgtccaggaagggctggccaaggggaccctcaagctggtcggcgcc 699 Query: 302 cactacgacttcgtctccgg 321 |||||||||||||| ||||| Sbjct: 700 cactacgacttcgtgtccgg 719
>gb|U08403.1|ZMU08403 Zea mays Golden Bantam carbonic anhydrase mRNA, complete cds Length = 2184 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 409 gccgtgtgcgcgctcaaggtgcaggtcatcgtggtcattggccacagctgctgcggtggc 468 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| |||||| Sbjct: 469 atcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtggaggac 528 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| |||| Sbjct: 529 tgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtccgtgccg 588 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||||| Sbjct: 589 ttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccagaacctc 648 Query: 242 ttgacctacccgttcgtcaagga 264 || |||||| ||||||||||| Sbjct: 649 aagagctaccccttcgtcaagga 671 Score = 192 bits (97), Expect = 9e-46 Identities = 217/257 (84%) Strand = Plus / Plus Query: 8 tgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtggaatcaag 67 ||||| |||||||| |||||| ||||||| |||||||| ||| |||||||||| |||| | Sbjct: 1021 tgcgccctcaaggtggaggtcctcgtggtcattggccatagctgctgcggtggcatcagg 1080 Query: 68 gctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggactgggtc 127 || || ||||| |||||||| ||||| |||| |||||||||||| |||||||||||| Sbjct: 1081 gcgctcctctccctcaaggacggcgcgcccgacaacttccacttcgtggaggactgggtc 1140 Query: 128 aggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcctttcgat 187 |||||||| ||| |||||||| |||||| ||| ||| ||| ||| |||| |||||| Sbjct: 1141 aggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtccgtgccgttcgat 1200 Query: 188 gaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctcttgacc 247 ||||||||| || ||||||||||||||||||| |||||||| |||||||||||| || | Sbjct: 1201 gaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccagaacctcaagagc 1260 Query: 248 tacccgttcgtcaagga 264 ||||| || |||||||| Sbjct: 1261 taccccttggtcaagga 1277 Score = 157 bits (79), Expect = 5e-35 Identities = 253/311 (81%) Strand = Plus / Plus Query: 8 tgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtggaatcaag 67 ||||| |||||||| |||||| ||||||| |||||||| ||| |||||||||| |||| | Sbjct: 1624 tgcgccctcaaggtggaggtcctcgtggtcattggccatagctgctgcggtggcatcagg 1683 Query: 68 gctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggactgggtc 127 || || ||||| ||| |||| |||||| ||| ||||||||||||| ||||||||||| Sbjct: 1684 gcgctcctctcactccaggacggcgcacctgacaccttccacttcgtcgaggactgggtt 1743 Query: 128 aggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcctttcgat 187 | ||||| ||| ||||||| |||||| ||| ||| |||||| |||| |||||| Sbjct: 1744 aagatcgccttcattgccaagatgaaggtaaagaaagagcacgcctcggtgccgttcgat 1803 Query: 188 gaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctcttgacc 247 |||||||| || | || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 1804 gaccagtggtccattctcgagaaggaggccgtgaacgtgtccctggagaacctcaagacc 1863 Query: 248 tacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggccactac 307 ||||| ||||||||||| || | | || || ||||||||||| |||||| ||||||| Sbjct: 1864 taccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcccactac 1923 Query: 308 gacttcgtctc 318 ||||| ||||| Sbjct: 1924 gactttgtctc 1934
>gb|U08401.1|ZMU08401 Zea mays carbonic anhydrase mRNA, complete cds Length = 1920 Score = 204 bits (103), Expect = 2e-49 Identities = 223/263 (84%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 688 gccgtgtgcgcgctcaaggtgcaggtcatcgtggtcattggccacagctgctgcggtggc 747 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| |||||| Sbjct: 748 atcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtggaggac 807 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| |||| Sbjct: 808 tgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtccgtgccg 867 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||||| Sbjct: 868 ttcgatgaccagtgctccatcctggagaaggaggccgtgaacgtgtcgctccagaacctc 927 Query: 242 ttgacctacccgttcgtcaagga 264 || |||||| ||||||||||| Sbjct: 928 aagagctaccccttcgtcaagga 950 Score = 180 bits (91), Expect = 4e-42 Identities = 256/311 (82%) Strand = Plus / Plus Query: 8 tgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtggaatcaag 67 ||||| |||||||| |||||| ||||||| |||||||| ||| |||||||||| |||| | Sbjct: 1300 tgcgccctcaaggtggaggtcctcgtggtcattggccatagctgctgcggtggcatcagg 1359 Query: 68 gctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggactgggtc 127 || || ||||| ||| |||| ||||||| | || ||||||||||||| ||||||||||| Sbjct: 1360 gcgctcctctcactccaggacggcgcagcctacaccttccacttcgtcgaggactgggtt 1419 Query: 128 aggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcctttcgat 187 | |||||| ||| ||||||| |||||| ||| ||| |||||| |||| |||||| Sbjct: 1420 aagatcggcttcattgccaagatgaaggtaaagaaagagcacgcctcggtgccgttcgat 1479 Query: 188 gaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctcttgacc 247 ||||||||| || | || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 1480 gaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggagaacctcaagacc 1539 Query: 248 tacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggccactac 307 ||||| ||||||||||| || | | || || ||||||||||| |||||| ||||||| Sbjct: 1540 taccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcccactac 1599 Query: 308 gacttcgtctc 318 ||||| ||||| Sbjct: 1600 gactttgtctc 1610
>gb|AY109373.1| Zea mays CL2331_1 mRNA sequence Length = 2552 Score = 172 bits (87), Expect = 9e-40 Identities = 255/311 (81%) Strand = Plus / Plus Query: 8 tgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtggaatcaag 67 ||||| |||||||| |||||| ||||||| |||||||| ||| |||||||||| |||| | Sbjct: 1300 tgcgccctcaaggtggaggtcctcgtggtcattggccatagctgctgcggtggcatcagg 1359 Query: 68 gctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggactgggtc 127 || || ||||| ||| |||| |||||| ||| ||||||||||||| ||||||||||| Sbjct: 1360 gcgctcctctccctccaggacggcgcacctgacaccttccacttcgtcgaggactgggtt 1419 Query: 128 aggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcctttcgat 187 | |||||| ||| ||||||| |||||| ||| ||| |||||| |||| |||||| Sbjct: 1420 aagatcggcttcattgccaagatgaaggtaaagaaagagcacgcctcggtgccgttcgat 1479 Query: 188 gaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctcttgacc 247 ||||||||| || | || |||||||||||||| ||||||||||| |||||||| |||| Sbjct: 1480 gaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggagaacctcaagacc 1539 Query: 248 tacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggccactac 307 ||||| ||||||||||| || | | || || ||||||||||| |||||| ||||||| Sbjct: 1540 taccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcccactac 1599 Query: 308 gacttcgtctc 318 ||||| ||||| Sbjct: 1600 gactttgtctc 1610 Score = 155 bits (78), Expect = 2e-34 Identities = 180/214 (84%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 688 gccgtgtgcgcgctcaaggtgcaggtcatcgtggtcattggccacagctgctgcggtggc 747 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||| ||| || ||||| |||||||| ||||| |||| |||| |||||| |||||| Sbjct: 748 atcagggcgctcctctccctcaaggacggcgcgcccgacaacttcaccttcgtggaggac 807 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggtgcagactgagtgcgcctccatgcct 181 |||||||||||||| ||| |||||||| |||||| ||| ||| ||| ||| |||| Sbjct: 808 tgggtcaggatcggcagccctgccaagaacaaggtgaagaaagagcacgcgtccgtgccg 867 Query: 182 ttcgatgaccagtgcaccgtcctggagaaggagg 215 ||||||||||||||| || ||||||||||||||| Sbjct: 868 ttcgatgaccagtgctccatcctggagaaggagg 901
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 234 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 293 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 25698376 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 25698435 Query: 294 tcggcggccactacgacttcgtctccggcaa 324 ||||||||||||||||||||||||||||||| Sbjct: 25698436 tcggcggccactacgacttcgtctccggcaa 25698466 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 27 tcatcgtggtgattggccacagccgctgcggtggaatcaaggctctgctctcgctcaagg 86 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 25697820 tcatcgtggtgattggccacagccgctgcggtggaatcaaggccctcctctcactcaagg 25697879 Query: 87 atgg 90 |||| Sbjct: 25697880 atgg 25697883 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 106 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 165 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 25698058 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 25698117 Query: 166 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 212 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 25698118 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 25698164 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 25698697 tgatgcataatttgatcgcagtgtgatcaaaagacatca 25698735 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 35 gtgattggccacagccgctgcggtggaatcaagg 68 |||||||| |||||| |||| ||||||||||||| Sbjct: 25709550 gtgattggtcacagctgctgtggtggaatcaagg 25709583
>dbj|AP003607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0004A09 Length = 158826 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 234 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 293 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 145182 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 145241 Query: 294 tcggcggccactacgacttcgtctccggcaa 324 ||||||||||||||||||||||||||||||| Sbjct: 145242 tcggcggccactacgacttcgtctccggcaa 145272 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 27 tcatcgtggtgattggccacagccgctgcggtggaatcaaggctctgctctcgctcaagg 86 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 144626 tcatcgtggtgattggccacagccgctgcggtggaatcaaggccctcctctcactcaagg 144685 Query: 87 atgg 90 |||| Sbjct: 144686 atgg 144689 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 106 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 165 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 144864 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 144923 Query: 166 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 212 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 144924 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 144970 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 145503 tgatgcataatttgatcgcagtgtgatcaaaagacatca 145541 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 35 gtgattggccacagccgctgcggtggaatcaagg 68 |||||||| |||||| |||| ||||||||||||| Sbjct: 156356 gtgattggtcacagctgctgtggtggaatcaagg 156389
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 234 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 293 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 840 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 899 Query: 294 tcggcggccactacgacttcgtctccggcaa 324 ||||||||||||||||||||||||||||||| Sbjct: 900 tcggcggccactacgacttcgtctccggcaa 930 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 27 tcatcgtggtgattggccacagccgctgcggtggaatcaaggctctgctctcgctcaagg 86 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 284 tcatcgtggtgattggccacagccgctgcggtggaatcaaggccctcctctcactcaagg 343 Query: 87 atgg 90 |||| Sbjct: 344 atgg 347 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 106 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 165 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 522 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 581 Query: 166 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 212 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 582 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 628 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 1161 tgatgcataatttgatcgcagtgtgatcaaaagacatca 1199 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 35 gtgattggccacagccgctgcggtggaatcaagg 68 |||||||| |||||| |||| ||||||||||||| Sbjct: 12014 gtgattggtcacagctgctgtggtggaatcaagg 12047
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||| ||||||||| || || |||||||||||||||||||||| ||||| | |||||| Sbjct: 730 ttcgacgaccagtgctccatcttggagaaggaggccgtcaacgtctccctgtacaacctc 789 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||| | || ||||| |||||| ||||||| |||||||||| ||||||||| Sbjct: 790 ctgacctacccctgggtgaaggaaggtgtgtccaacggctccctcaagctggtcggcggc 849 Query: 302 cactacgacttcgtc 316 ||||||||||||||| Sbjct: 850 cactacgacttcgtc 864 Score = 117 bits (59), Expect = 4e-23 Identities = 131/155 (84%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| ||||| || || || |||||||||||||||||||| Sbjct: 550 gccgtctgcgccctcaaggtcaaggtcctcaccgtcatcggccacagccgctgcggtggc 609 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| | |||| ||||||| |||| |||||||||||| |||||| Sbjct: 610 atcaaggcgctcctctcaatgcaggacggcgcagccgacaacttccacttcgtcgaggac 669 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggt 156 |||||||||||||| |||| |||||||||||||| Sbjct: 670 tgggtcaggatcggcttcctcgccaagaagaaggt 704 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 ||||||||||||||| || |||||| || |||||||||| Sbjct: 1108 tgatgcataatttgaccgccttgtggtcaaaagacatca 1146
>gb|U19739.1|UPU19739 Urochloa panicoides carbonic anhydrase 2 mRNA, complete cds Length = 1034 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||||||| || || ||||||||||||| |||||||| |||||| | |||||| Sbjct: 569 ttcgatgaccagtgctccatcttggagaaggaggcagtcaacgtctccctctacaacctc 628 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 |||||||||| | || ||||| || ||| ||||||| |||||||||| ||||||||| Sbjct: 629 ctgacctacccctgggtgaaggaaggcgtgtccaacgggtccctcaagctggtcggcggc 688 Query: 302 cactacgacttcgtc 316 ||||||||||||||| Sbjct: 689 cactacgacttcgtc 703 Score = 109 bits (55), Expect = 1e-20 Identities = 130/155 (83%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggtgattggccacagccgctgcggtgga 61 ||||||||||| |||||||| ||||| || || || |||||||||||||||||||| Sbjct: 389 gccgtctgcgccctcaaggtcaaggtcctcaccgtcatcggccacagccgctgcggtggc 448 Query: 62 atcaaggctctgctctcgctcaaggatggcgcagacgactccttccacttcgttgaggac 121 |||||||| || ||||| | |||||||||||| |||| |||||||||||| ||||| Sbjct: 449 atcaaggcgctcctctccatgcaggatggcgcagccgacaacttccacttcgtcgaggat 508 Query: 122 tgggtcaggatcgggttcccggccaagaagaaggt 156 |||||||||||||| |||| || ||||||||||| Sbjct: 509 tgggtcaggatcggcttcctcgcgaagaagaaggt 543
>dbj|AB016283.1| Oryza sativa gene for carbonic anhydrase, complete cds Length = 8532 Score = 125 bits (63), Expect = 2e-25 Identities = 84/91 (92%) Strand = Plus / Plus Query: 234 agaacctcttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcg 293 |||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||| Sbjct: 7957 agaacctcaagacctacccgttcgtcaaggaggggatcgccaacggcaccctcaagctcg 8016 Query: 294 tcggcggccactacgacttcgtctccggcaa 324 ||||||||||||||||||||||||||||||| Sbjct: 8017 tcggcggccactacgacttcgtctccggcaa 8047 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 27 tcatcgtggtgattggccacagccgctgcggtggaatcaaggctctgctctcgctcaagg 86 ||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 7401 tcatcgtggtgattggccacagccgctgcggtggaatcaaggccctcctctcactcaagg 7460 Query: 87 atgg 90 |||| Sbjct: 7461 atgg 7464 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 106 ccacttcgttgaggactgggtcaggatcgggttcccggccaagaagaaggtgcagactga 165 ||||||||| |||||||||||||||| ||| ||||| |||||||||||||| ||||| || Sbjct: 7639 ccacttcgtcgaggactgggtcaggaccggtttccccgccaagaagaaggttcagaccga 7698 Query: 166 gtgcgcctccatgcctttcgatgaccagtgcaccgtcctggagaagg 212 | |||||| |||||||||||||||| ||| || || ||||||||| Sbjct: 7699 gcacgcctcgctgcctttcgatgaccaatgcgccatcttggagaagg 7745 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 8278 tgatgcataatttgatcgcagtgtgatcaaaagacatca 8316
>gb|M95073.1|MZEORFN Zea mays putative carbonic anhydrase homolog mRNA, partial cds Length = 210 Score = 97.6 bits (49), Expect = 4e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 182 ttcgatgaccagtgcaccgtcctggagaaggaggccgtcaacgtgtccctccagaacctc 241 ||||||||||||||| || | || |||||||||||||| ||||||||||| |||||||| Sbjct: 35 ttcgatgaccagtgctccattctcgagaaggaggccgtgaacgtgtccctggagaacctc 94 Query: 242 ttgacctacccgttcgtcaaggagggtgtgaccaacggaaccctcaagctcgtcggcggc 301 ||||||||| ||||||||||| || | | || || ||||||||||| |||||| | Sbjct: 95 aagacctaccccttcgtcaaggaagggcttgcaaatgggaccctcaagctgatcggcgcc 154 Query: 302 cactacgacttcgtctc 318 ||||||||||| ||||| Sbjct: 155 cactacgactttgtctc 171
>gb|AY107300.1| Zea mays PCO064410 mRNA sequence Length = 397 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 2 gccgtctgcgcgctcaaggttgaggtcatcgtggt 36 ||||||||||| |||||||| |||||||||||||| Sbjct: 360 gccgtctgcgccctcaaggtggaggtcatcgtggt 394
>emb|AJ547634.1|PVU547634 Phaseolus vulgaris partial mRNA for carbonic anhydrase (ca gene) Length = 313 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 33 tggtgattggccacagccgctgcggtggaatc 64 |||| ||||||||||| ||||||||||||||| Sbjct: 21 tggttattggccacagtcgctgcggtggaatc 52
>dbj|AK058203.3| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A04, full insert sequence Length = 156 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 546 tgatgcataatttgatcgtcttgtgatcgaaagacatca 584 |||||||||||||||||| ||||||| |||||||||| Sbjct: 71 tgatgcataatttgatcgcagtgtgatcaaaagacatca 109
>emb|AJ543754.1|LJA543754 Lotus japonicus mRNA for carbonic anhydrase (ca1 gene) Length = 1088 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 attggccacagccgctgcggtggaat 63 ||||| |||||||||||||||||||| Sbjct: 506 attggacacagccgctgcggtggaat 531
>dbj|AP006093.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT47G03, TM0166, complete sequence Length = 97864 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 attggccacagccgctgcggtggaat 63 ||||| |||||||||||||||||||| Sbjct: 24579 attggacacagccgctgcggtggaat 24604
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 atcgtggtgattggccacagccgctgcggtggaatcaaggc 69 ||||||||||| |||||| | || |||||||| |||||||| Sbjct: 1761830 atcgtggtgatgggccacgggcgttgcggtggcatcaaggc 1761790
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gtgattggccacagccgctgc 55 ||||||||||||||||||||| Sbjct: 1821257 gtgattggccacagccgctgc 1821237
>ref|XM_838468.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1386) partial mRNA Length = 4440 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 gtgattggccacagccgctgc 55 ||||||||||||||||||||| Sbjct: 4391 gtgattggccacagccgctgc 4371
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 586 atataagtttaatataatatt 606 ||||||||||||||||||||| Sbjct: 154356 atataagtttaatataatatt 154336
>gb|AF140060.1|BNFADD1 Brassica napus FAD31 gene, FAD31-DN allele, partial sequence Length = 655 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 tataagtttaatataatattt 607 ||||||||||||||||||||| Sbjct: 299 tataagtttaatataatattt 319
>gb|AF056572.1| Brassica rapa cultivar R500 FAD31 gene, FAD31-R500 allele, partial cds Length = 1714 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 587 tataagtttaatataatattt 607 ||||||||||||||||||||| Sbjct: 300 tataagtttaatataatattt 320
>gb|AE009465.1| Brucella melitensis 16M chromosome I, section 22 of 195 of the complete sequence Length = 11987 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 29 atcgtggtgattggccacagccgctgcggtggaatcaaggc 69 ||||||||||| |||||| | || |||||||| |||||||| Sbjct: 392 atcgtggtgatgggccacgggcgttgcggtggcatcaaggc 432
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 atcgtggtgattggccacagccgctgcggtggaatcaaggc 69 ||||||||||| |||||| | || |||||||| |||||||| Sbjct: 1778723 atcgtggtgatgggccacgggcgttgcggtggcatcaaggc 1778683
>dbj|AP002373.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-212D19, complete sequence Length = 138197 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 370 acatatacaaacgtacatata 390 ||||||||||||||||||||| Sbjct: 80872 acatatacaaacgtacatata 80852
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 29 atcgtggtgattggccacagccgctgcggtggaatcaaggc 69 ||||||||||| |||||| | || |||||||| |||||||| Sbjct: 1775870 atcgtggtgatgggccacgggcgttgcggtggcatcaaggc 1775830
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 201 tcctggagaaggaggccgtcaacgt 225 |||||| |||||||||||||||||| Sbjct: 2833114 tcctggcgaaggaggccgtcaacgt 2833138
>ref|XM_467687.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1138 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>ref|NM_196639.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0019M20.11), mRNA Length = 642 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 208 cctcaagctcgtcggcggcc 189
>gb|AE014841.1| Plasmodium falciparum 3D7 chromosome 11 section 6 of 8 of the complete sequence Length = 252420 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 acatatacaaacgtacatatatca 393 ||||||||||| |||||||||||| Sbjct: 127196 acatatacaaatgtacatatatca 127219
>emb|Z99297.1|HS262D12 Human DNA sequence from clone RP1-262D12 on chromosome 1q23.3-24.3 Contains the 5' end of the MRPS14 gene for mitochondrial ribosomal protein S14, a serologically defined colon cancer antigen 3 (SDCCAG3) pseudogene, the 5' end of the TNN gene for tenascin N and a CpG island, complete sequence Length = 100997 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 taagtttaatataatatttt 608 |||||||||||||||||||| Sbjct: 92554 taagtttaatataatatttt 92573
>emb|AL161799.19| Human DNA sequence from clone RP11-177H22 on chromosome 10 Contains part of the MLLT10 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (AF10) and a heterogeneous nuclear ribonucleoprotein R (HNRPR)(HNRNPR, hnRNP-R) pseudogene, complete sequence Length = 139996 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 catatataagtttaatataa 602 |||||||||||||||||||| Sbjct: 62551 catatataagtttaatataa 62570
>emb|AL079341.19|HSDJ319M7 Human DNA sequence from clone RP1-319M7 on chromosome 6p21.1-21.3 Contains the 5' end of the gene for a novel protein (contains KIAA1880 and FLJ32945), a TRK-fused gene (TFG) pseudogene and a CpG island, complete sequence Length = 128216 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 atttgccataagcaatagaa 500 |||||||||||||||||||| Sbjct: 55881 atttgccataagcaatagaa 55862
>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome Length = 1512977 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tcatatataagtttaatata 601 |||||||||||||||||||| Sbjct: 1425643 tcatatataagtttaatata 1425662
>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome Length = 1499920 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tcatatataagtttaatata 601 |||||||||||||||||||| Sbjct: 1412649 tcatatataagtttaatata 1412668
>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome Length = 1516355 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tcatatataagtttaatata 601 |||||||||||||||||||| Sbjct: 1447631 tcatatataagtttaatata 1447650
>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11, complete sequence Length = 145678 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 584 atatataagtttaatataatattt 607 |||||||| ||||||||||||||| Sbjct: 47373 atatataattttaatataatattt 47396
>gb|AC087545.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0019M20, complete sequence Length = 139421 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 110239 cctcaagctcgtcggcggcc 110220
>gb|AC023691.3| Drosophila melanogaster X BAC RP98-12H1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179892 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 tatataagtttaatataatatttt 608 |||||| ||||||||||||||||| Sbjct: 159074 tatatatgtttaatataatatttt 159051
>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186714 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 585 tatataagtttaatataatatttt 608 |||||| ||||||||||||||||| Sbjct: 107853 tatatatgtttaatataatatttt 107876
>gb|AC021856.7| Homo sapiens BAC clone RP11-553E5 from 4, complete sequence Length = 202507 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 tatataagtttaatataatatttt 608 |||||||||||||||||| ||||| Sbjct: 129012 tatataagtttaatataacatttt 128989
>gb|AC157894.3| Medicago truncatula chromosome 7 BAC clone mth2-85d15, complete sequence Length = 127331 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 tatataagtttaatataatatttt 608 ||||||| |||||||||||||||| Sbjct: 31983 tatataaatttaatataatatttt 31960
>gb|U70770.1|DMU70770 Drosophila melanogaster furrowed (fw) gene, complete cds Length = 13523 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 585 tatataagtttaatataatatttt 608 |||||| ||||||||||||||||| Sbjct: 9069 tatatatgtttaatataatatttt 9092
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 14930461 cctcaagctcgtcggcggcc 14930442
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 28350096 cctcaagctcgtcggcggcc 28350077
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 30832097 cctcaagctcgtcggcggcc 30832078
>gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562A8 map 15q21.1, complete sequence Length = 198550 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ataagtttaatataatattt 607 |||||||||||||||||||| Sbjct: 74432 ataagtttaatataatattt 74413
>gb|AC018887.10| Homo sapiens BAC clone RP11-419E14 from 2, complete sequence Length = 189466 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 atatacaaacgtacatatat 391 |||||||||||||||||||| Sbjct: 169048 atatacaaacgtacatatat 169067
>gb|AC113431.2| Homo sapiens chromosome 5 clone RP11-90F2, complete sequence Length = 156789 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 589 taagtttaatataatatttt 608 |||||||||||||||||||| Sbjct: 126636 taagtttaatataatatttt 126655
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 aaagacatcatatataagtt 594 |||||||||||||||||||| Sbjct: 320922 aaagacatcatatataagtt 320903
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 62674 cctcaagctcgtcggcggcc 62655
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0623A10 Length = 156517 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 148125 cctcaagctcgtcggcggcc 148106
>dbj|AP005112.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684F11 Length = 147731 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 15674 cctcaagctcgtcggcggcc 15655
>dbj|AK108113.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-C02, full insert sequence Length = 1138 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 121 cctcaagctcgtcggcggcc 102
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete sequence Length = 148644 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 59937 cctcaagctcgtcggcggcc 59918
>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete sequence Length = 308317 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 tatataagtttaatataatatttt 608 |||||| ||||||||||||||||| Sbjct: 286515 tatatatgtttaatataatatttt 286492
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cctcaagctcgtcggcggcc 302 |||||||||||||||||||| Sbjct: 14938702 cctcaagctcgtcggcggcc 14938683
>gb|AF018256.1|AF018256 Ambystoma tigrinum glutamate transporter 1 (sEAAT1) mRNA, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ggccaagaagaaggtgcaga 161 |||||||||||||||||||| Sbjct: 246 ggccaagaagaaggtgcaga 265
>emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chromosome 6, complete sequence Length = 123817 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 ataagtttaatataatattt 607 |||||||||||||||||||| Sbjct: 67010 ataagtttaatataatattt 66991 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,297,203 Number of Sequences: 3902068 Number of extensions: 4297203 Number of successful extensions: 79877 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79384 Number of HSP's gapped (non-prelim): 483 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)