ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63c04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U36939.1|HVU36939 Hordeum vulgare vacuolar ATPase catalytic subunit mRNA, partial cds Length = 2089 Score = 1148 bits (579), Expect = 0.0 Identities = 609/620 (98%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagctt 61 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1308 gaacaaaagcacgtgaagtgttgcagag-agaggatgatctaaatgaaattgtccagctt 1366 Query: 62 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1367 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 1426 Query: 122 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1427 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 1486 Query: 182 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1487 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 1546 Query: 242 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1547 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 1606 Query: 302 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagac 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1607 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccccgcagaaggcgaagac 1666 Query: 362 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 421 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1667 gtccttgtcgcgaaattccagaagttatacgacgaccttacagccgggttccgcaaccta 1726 Query: 422 gaagacgaggctaggtaaaagaaagaagaaacgttgtgtatggccaccgtgtaaacaata 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1727 gaagacgaggctaggtaaaagaaagaagaaacgttgtgtatggccaccgtgtaaacaata 1786 Query: 482 aggagcaccaaatgctgtgaacgacttgcgagcaatttgcttttgcttcaccggagtttg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1787 aggagcaccaaatgctgtgaacgacttgcgagcaatttgcttttgcttcaccggagtttg 1846 Query: 542 tgtagatgcgaattacgtttcaggatccccnnnnnnngcgacagacagacagccttgttt 601 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1847 tgtagatgcgaattacgtttcaggatcccctttttttgcgacagacagacagccttgttt 1906 Query: 602 tttcaggattttacattatt 621 |||||||||||||||||||| Sbjct: 1907 tttcaggattttacattatt 1926
>dbj|AB032840.1| Hordeum vulgare HVA/68 mRNA for vacuolar proton-ATPase, complete cds Length = 2281 Score = 1140 bits (575), Expect = 0.0 Identities = 608/620 (98%), Gaps = 1/620 (0%) Strand = Plus / Plus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagctt 61 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1485 gaacaaaagcacgtgaagtgttgcagag-agaggatgatctaaatgaaattgtccagctt 1543 Query: 62 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1544 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 1603 Query: 122 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 181 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1604 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgcccattctac 1663 Query: 182 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1664 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 1723 Query: 242 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 1783 Query: 302 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagac 361 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1784 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccccgcagaaggcgaagac 1843 Query: 362 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 1903 Query: 422 gaagacgaggctaggtaaaagaaagaagaaacgttgtgtatggccaccgtgtaaacaata 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1904 gaagacgaggctaggtaaaagaaagaagaaacgttgtgtatggccaccgtgtaaacaata 1963 Query: 482 aggagcaccaaatgctgtgaacgacttgcgagcaatttgcttttgcttcaccggagtttg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1964 aggagcaccaaatgctgtgaacgacttgcgagcaatttgcttttgcttcaccagagtttg 2023 Query: 542 tgtagatgcgaattacgtttcaggatccccnnnnnnngcgacagacagacagccttgttt 601 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 2024 tgtagatgcgaattacgtttcaggatcccctttttttgcgacagacagacagccttgttt 2083 Query: 602 tttcaggattttacattatt 621 |||||||||||||||||||| Sbjct: 2084 tttcaggattttacattatt 2103
>gb|DQ432014.1| Triticum aestivum vacuolar proton-ATPase subunit A mRNA, complete cds Length = 2358 Score = 904 bits (456), Expect = 0.0 Identities = 547/574 (95%), Gaps = 5/574 (0%) Strand = Plus / Plus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagctt 61 |||| ||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1540 gaacaaaagctcgtgaagtgttgcagag-agaggatgatctaaacgaaattgtccagctt 1598 Query: 62 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 121 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1599 gttggtaaagatgcactgggagaatctgacaagattactttggagacagccaagcttctg 1658 Query: 122 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 181 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 1659 agggaagattatttggcacagaatgcttttaccccatatgacaagtattgtccattctac 1718 Query: 182 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 241 |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||| Sbjct: 1719 aaatctgtctggatgatgcgcaacattattcatttcaatacattagcgaatcaggccgtg 1778 Query: 242 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 1838 Query: 302 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagac 361 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1839 ggcgatctattttaccgccttgtatcccaaaagttcgaagaccccgcagaaggcgaagac 1898 Query: 362 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 421 ||||| |||| |||||||||||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 1899 gtcctaatcgcaaaattccagaagttgtacgacgacctcaccaccgggttccgcaaccta 1958 Query: 422 gaagacgaggctaggtaaaa---gaaagaagaaacgttgtgtatggccaccgtgtaaaca 478 |||||||||||||||||||| || ||||||||| |||||||||||||||||||||||| Sbjct: 1959 gaagacgaggctaggtaaaaaaggagagaagaaacattgtgtatggccaccgtgtaaaca 2018 Query: 479 ataaggagcaccaaatgctgtgaacgacttgcgagcaatttgc-ttttgcttcaccggag 537 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2019 ataaggagcaccaaatgctgtgaacgacttgcgagcaatttgctttttgcttcaccggag 2078 Query: 538 tttgtgtagatgcgaattacgtttcaggatcccc 571 ||||||||||||||||||||||||||||| |||| Sbjct: 2079 tttgtgtagatgcgaattacgtttcaggaccccc 2112 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 581 gacagacagacagccttgttttttc 605 ||||||||||||||||||||||||| Sbjct: 2134 gacagacagacagccttgttttttc 2158
>dbj|AK061925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C02, full insert sequence Length = 1001 Score = 428 bits (216), Expect = e-117 Identities = 382/436 (87%), Gaps = 1/436 (0%) Strand = Plus / Plus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagctt 61 |||| ||||| ||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct: 276 gaacaaaagctcgtgaagtgttacagag-agaggacgatctaaatgaaattgtccagctt 334 Query: 62 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 121 ||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| || || Sbjct: 335 gttggtaaagatgcactggcagaatctgataagattacattggaaacagccaagctacta 394 Query: 122 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 181 ||||||||||| ||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 395 agggaagattacttggcacagaatgcatttaccccatatgacaagttctgtccattctac 454 Query: 182 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 241 || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 455 aagtctgtttggatgatgcgcaacattattcatttcaatacattagcaaatcaggctgtg 514 Query: 242 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 301 ||||| ||||| |||||||||||||| || ||||| ||| ||| ||||| ||| ||| Sbjct: 515 gagcgtgcagctaatgctgatggacaaaaaataacatacagtgtcataaagcatcgtatg 574 Query: 302 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagac 361 |||||||||||||| ||||| ||||| |||||||| || ||||||||||| || ||||| Sbjct: 575 ggtgatctattttatcgcctagtatctcaaaagtttgaggaccctgcagagggtgaagat 634 Query: 362 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 421 ||||| ||||| ||||||||||| || || || ||||| || |||| |||||||||||| Sbjct: 635 gtcctagtcgcaaaattccagaaattgtatgatgacctcacaaccggattccgcaaccta 694 Query: 422 gaagacgaggctaggt 437 ||||| || ||||||| Sbjct: 695 gaagatgaagctaggt 710
>dbj|AK069821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028L13, full insert sequence Length = 2315 Score = 420 bits (212), Expect = e-114 Identities = 381/436 (87%), Gaps = 1/436 (0%) Strand = Plus / Plus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagctt 61 |||| ||||| ||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct: 1575 gaacaaaagctcgtgaagtgttacagag-agaggacgatctaaatgaaattgtccagctt 1633 Query: 62 gttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctg 121 ||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| || || Sbjct: 1634 gttggtaaagatgcactggcagaatctgataagattacattggaaacagccaagctacta 1693 Query: 122 agggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctac 181 ||||||||||| ||||||||||| || ||||||||||| ||||||| |||||||||||| Sbjct: 1694 agggaagattacttggcacagaatgcatttaccccatatgacaagttctgtccattctac 1753 Query: 182 aaatctgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtg 241 | |||||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 1754 gagtctgtttggatgatgcgcaacattattcatttcaatacattagcaaatcaggctgtg 1813 Query: 242 gagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatg 301 ||||| ||||| |||||||||||||| || ||||| ||| ||| ||||| ||| ||| Sbjct: 1814 gagcgtgcagctaatgctgatggacaaaaaataacatacagtgtcataaagcatcgtatg 1873 Query: 302 ggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagac 361 |||||||||||||| ||||| ||||| |||||||| || ||||||||||| || ||||| Sbjct: 1874 ggtgatctattttatcgcctagtatctcaaaagtttgaggaccctgcagagggtgaagat 1933 Query: 362 gtccttgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaaccta 421 ||||| ||||| ||||||||||| || || || ||||| || |||| |||||||||||| Sbjct: 1934 gtcctagtcgcaaaattccagaaattgtatgatgacctcacaaccggattccgcaaccta 1993 Query: 422 gaagacgaggctaggt 437 ||||| || ||||||| Sbjct: 1994 gaagatgaagctaggt 2009
>dbj|AK067063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089J10, full insert sequence Length = 2295 Score = 327 bits (165), Expect = 3e-86 Identities = 357/420 (85%), Gaps = 1/420 (0%) Strand = Plus / Plus Query: 10 gcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttggtaa 69 |||||||| ||||||||||| || |||||| |||||||||| || |||||||||||||| Sbjct: 1537 gcacgtgaggtgttgcagagg-gaagatgatttaaatgaaatagtgcagcttgttggtaa 1595 Query: 70 agatgcactgggagaatctgacaagattacgttggagacagccaaacttctgagggaaga 129 ||| ||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 1596 agacgcactggcagaatctgacaagattacactggagacagcaaaacttctgagagaaga 1655 Query: 130 ttatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatctgt 189 |||||||||||| || || || |||||||| || |||||||| ||||||||||||||||| Sbjct: 1656 ttatttggcacaaaatgcattcaccccatatgataagtattgcccattctacaaatctgt 1715 Query: 190 ttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtggagcgagc 249 |||||||||||||||||||||||||||||| ||| || | ||||| |||||||| || Sbjct: 1716 ttggatgatgcgcaacattattcatttcaacacattggcaacccaggcggtggagcgggc 1775 Query: 250 agccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatgggtgatct 309 ||| |||||||||||| ||||| || ||| ||| ||||| ||||||||| ||||| Sbjct: 1776 agctggtgctgatggacagaagattacatacagtgtcataaagcatcgcatgggcgatct 1835 Query: 310 attttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagacgtccttgt 369 ||| |||||||| || || ||||| ||||| || || ||||| ||| |||| || | | Sbjct: 1836 attctaccgcctagtgtcgcaaaaattcgaggatcccgcagagggcaaagaagttttgat 1895 Query: 370 cgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaagacga 429 |||||||| |||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1896 tgcgaaatttcagaagctgtacgatgaccttaccgccgggttccgcaatctagaagacga 1955
>gb|AY104754.1| Zea mays PCO134411 mRNA sequence Length = 2254 Score = 307 bits (155), Expect = 2e-80 Identities = 359/426 (84%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||||||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||||| Sbjct: 1532 aaagcacgtgaggtgttgcagagg-gaggacgatctgaatgaaattgtgcagcttgttgg 1590 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 ||||||||| |||| ||||||||||||||||||| |||||||||| || ||| |||| || Sbjct: 1591 taaagatgcgctggcagaatctgacaagattacgctggagacagcaaagcttttgagaga 1650 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 ||||||||||||||| || || || |||||||| || |||| || |||||||||||||| Sbjct: 1651 agattatttggcacaaaatgcattcaccccatatgataagttctgcccattctacaaatc 1710 Query: 187 tgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtggagcg 246 |||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||| Sbjct: 1711 cgtttggatgatgcgcaacattattcacttcaacacattggcaaatcaggctgtggagcg 1770 Query: 247 agcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatgggtga 306 ||||| | |||| || || |||||||| ||| ||| ||||| ||| |||| || Sbjct: 1771 ggcagctggtactgacggccataagataacatacagtgtcataaagcatcggttggggga 1830 Query: 307 tctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagacgtcct 366 ||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| | | Sbjct: 1831 tctattttatcgcctagtatcccaaaagttcgaggatcctgcagaaggcgaagaagcttt 1890 Query: 367 tgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaaga 426 |||| || || |||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 1891 ggtcggcaagtttaagaaactgtacgacgaccttaccactgggttccgcaacctagaaga 1950 Query: 427 cgaggc 432 ||||| Sbjct: 1951 tgaggc 1956
>gb|BT024092.1| Zea mays clone EL01N0551D01 mRNA sequence Length = 2273 Score = 291 bits (147), Expect = 1e-75 Identities = 357/426 (83%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||||||||| |||||||| || ||||| ||||| ||||||||||| ||||||||||| Sbjct: 1543 aaagcacgtgaggtgttgcaaagg-gaggacgatctgaatgaaattgtgcagcttgttgg 1601 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 ||||||||| |||| ||||||||||||||||||| |||||||||| || ||| |||| || Sbjct: 1602 taaagatgcgctggcagaatctgacaagattacgctggagacagcaaagcttttgagaga 1661 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 ||||||||||||||| || || || |||||||| || |||| || |||||||||||||| Sbjct: 1662 agattatttggcacaaaatgcattcaccccatatgataagttctgcccattctacaaatc 1721 Query: 187 tgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtggagcg 246 ||||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||| Sbjct: 1722 tgtttggatgatgcgcaacattattcacttcaacacattggcaaatcaggctgtggagcg 1781 Query: 247 agcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatgggtga 306 ||||| | |||| || || |||||||| ||| ||| ||||| ||| |||| || Sbjct: 1782 ggcagctggtactgacggccataagataacatacagtgtcataaagcatcggttggggga 1841 Query: 307 tctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagacgtcct 366 ||||||||| ||||| |||||||||||||| || || ||||||||||||||||| | | Sbjct: 1842 tctattttatcgcctagtatcccaaaagtttgaggatcctgcagaaggcgaagaagcttt 1901 Query: 367 tgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaaga 426 |||| || || |||| | || |||||||||||| | |||||||||||||||||||| Sbjct: 1902 ggtcggcaagtttaagaaactgtatgacgaccttaccactgggttccgcaacctagaaga 1961 Query: 427 cgaggc 432 ||||| Sbjct: 1962 tgaggc 1967
>gb|U36436.1|ZMU36436 Zea mays vacuolar ATPase 69 kDa subunit mRNA, partial cds Length = 2000 Score = 291 bits (147), Expect = 1e-75 Identities = 357/426 (83%), Gaps = 1/426 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 |||||||| || ||||||||||| ||||| ||||| ||||||||||| ||||||||||| Sbjct: 1255 aaagcacgcgaggtgttgcagagg-gaggacgatctgaatgaaattgtgcagcttgttgg 1313 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 ||||||||| |||| ||||||||||||||||||| |||||||||| || ||| |||| || Sbjct: 1314 taaagatgcgctggcagaatctgacaagattacgctggagacagcaaagcttttgagaga 1373 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 ||||||||||||||| || || || |||||||| || |||| || |||||||||||||| Sbjct: 1374 agattatttggcacaaaatgcattcaccccatatgataagttctgcccattctacaaatc 1433 Query: 187 tgtttggatgatgcgcaacattattcatttcaatcaattagcgaatcaggctgtggagcg 246 |||||||||||||||||||||||||| ||||| ||| || ||||||||||||||||| Sbjct: 1434 cgtttggatgatgcgcaacattattcacttcaacacattggcaaatcaggctgtggagcg 1493 Query: 247 agcagccaatgctgatggacacaagataacctacgccgtcgtaaagagtcgcatgggtga 306 ||||| | |||| || || |||||||| ||| ||| ||||| ||| |||| || Sbjct: 1494 ggcagctggtactgacggccataagataacatacagtgtcataaagcatcggttggggga 1553 Query: 307 tctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaagacgtcct 366 ||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||| | | Sbjct: 1554 tctattttatcgcctagtatcccaaaagttcgaggatcctgcagaaggtgaagaagcttt 1613 Query: 367 tgtcgcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaaga 426 |||| || || |||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 1614 ggtcggcaagtttaagaaactgtacgacgaccttaccactgggttccgcaacctagaaga 1673 Query: 427 cgaggc 432 ||||| Sbjct: 1674 tgaggc 1679
>gb|AF218356.1|AF218356 Allium cepa vacuolar H+-ATPase catalytic subunit mRNA, partial cds Length = 570 Score = 157 bits (79), Expect = 5e-35 Identities = 154/179 (86%) Strand = Plus / Plus Query: 42 taaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagattacgt 101 |||||||||||||||||||||||||||||||||| || | |||| ||||||| ||||| Sbjct: 173 taaatgaaattgtccagcttgttggtaaagatgctctagcagaaactgacaaaattacac 232 Query: 102 tggagacagccaaacttctgagggaagattatttggcacagaacgcttttaccccatacg 161 | ||||| ||||| || |||| ||||| ||||| |||||||| || |||||||| || | Sbjct: 233 tagagactgccaagctcttgagagaagactatttagcacagaatgcctttaccccgtatg 292 Query: 162 acaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaat 220 |||| | ||||||||||||||| ||||||||||||||||| ||||| ||||| |||||| Sbjct: 293 acaaattttgtccattctacaagtctgtttggatgatgcgtaacataattcacttcaat 351
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 56 cagcttgttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaa 115 ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 4126064 cagcttgttggtaaagacgcactggcagaatctgacaagattacactggagacagcaaaa 4126123 Query: 116 cttctgagggaagattatttggcaca 141 |||||||| ||||||||||||||||| Sbjct: 4126124 cttctgagagaagattatttggcaca 4126149 Score = 103 bits (52), Expect = 7e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 164 aagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaa 219 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4126257 aagtattgcccattctacaaatctgtttggatgatgcgcaacattattcatttcaa 4126312 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 371 gcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaagacga 429 |||||||| |||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 4127132 gcgaaatttcagaagctgtacgatgaccttaccgccgggttccgcaatctagaagacga 4127190 Score = 48.1 bits (24), Expect = 0.035 Identities = 72/88 (81%) Strand = Plus / Plus Query: 234 aggctgtggagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaaga 293 |||| |||||||| ||||| |||||||||||| ||||| || ||| ||| ||||| Sbjct: 4126910 aggcggtggagcgggcagctggtgctgatggacagaagattacatacagtgtcataaagc 4126969 Query: 294 gtcgcatgggtgatctattttaccgcct 321 ||||||||| |||||||| |||||||| Sbjct: 4126970 atcgcatgggcgatctattctaccgcct 4126997
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 123 bits (62), Expect = 7e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 56 cagcttgttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaa 115 ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 36078 cagcttgttggtaaagacgcactggcagaatctgacaagattacactggagacagcaaaa 36137 Query: 116 cttctgagggaagattatttggcaca 141 |||||||| ||||||||||||||||| Sbjct: 36138 cttctgagagaagattatttggcaca 36163 Score = 103 bits (52), Expect = 7e-19 Identities = 55/56 (98%) Strand = Plus / Plus Query: 164 aagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaa 219 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36271 aagtattgcccattctacaaatctgtttggatgatgcgcaacattattcatttcaa 36326 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 371 gcgaaattccagaagttatacgacgaccttaccgccgggttccgcaacctagaagacga 429 |||||||| |||||| | ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 37146 gcgaaatttcagaagctgtacgatgaccttaccgccgggttccgcaatctagaagacga 37204 Score = 48.1 bits (24), Expect = 0.035 Identities = 72/88 (81%) Strand = Plus / Plus Query: 234 aggctgtggagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaaga 293 |||| |||||||| ||||| |||||||||||| ||||| || ||| ||| ||||| Sbjct: 36924 aggcggtggagcgggcagctggtgctgatggacagaagattacatacagtgtcataaagc 36983 Query: 294 gtcgcatgggtgatctattttaccgcct 321 ||||||||| |||||||| |||||||| Sbjct: 36984 atcgcatgggcgatctattctaccgcct 37011
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 56 cagcttgttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaa 115 ||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| Sbjct: 26904588 cagcttgttggtaaagatgcactggcagaatctgataagattacattggaaacagccaag 26904529 Query: 116 cttctgagggaagattatttggcacagaacgcttttacccc 156 || || ||||||||||| ||||||||||| || |||||||| Sbjct: 26904528 ctactaagggaagattacttggcacagaatgcatttacccc 26904488 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 161 gacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaat 220 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 26904376 gacaagttctgtccattctacaagtctgtttggatgatgcgcaacattattcatttcaat 26904317 Query: 221 caattagcgaatcagg 236 |||||| ||||||| Sbjct: 26904316 acattagcaaatcagg 26904301 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 329 caaaagttcgaagaccctgcagaaggcgaagacgtccttgtcgcgaaattccagaagtta 388 |||||||| || ||||||||||| || ||||| ||||| ||||| ||||||||||| || Sbjct: 26903081 caaaagtttgaggaccctgcagagggtgaagatgtcctagtcgcaaaattccagaaattg 26903022 Query: 389 tacgacgaccttaccgccgggttccgcaacctagaagacgaggctaggt 437 || || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 26903021 tatgatgacctcacaaccggattccgcaacctagaagatgaagctaggt 26902973 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 234 aggctgtggagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaaga 293 ||||||||||||| ||||| |||||||||||||| || ||||| ||| ||| ||||| Sbjct: 26903272 aggctgtggagcgtgcagctaatgctgatggacaaaaaataacatacagtgtcataaagc 26903213 Query: 294 gtcgcatgggtgatctattttaccgcct 321 ||| ||||||||||||||||| ||||| Sbjct: 26903212 atcgtatgggtgatctattttatcgcct 26903185 Score = 65.9 bits (33), Expect = 1e-07 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccag 58 |||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 26904903 gaacaaaagctcgtgaagtgttacagag-agaggacgatctaaatgaaattgtccag 26904848
>dbj|AP004744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0065C04 Length = 165270 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 56 cagcttgttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaa 115 ||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| Sbjct: 28349 cagcttgttggtaaagatgcactggcagaatctgataagattacattggaaacagccaag 28290 Query: 116 cttctgagggaagattatttggcacagaacgcttttacccc 156 || || ||||||||||| ||||||||||| || |||||||| Sbjct: 28289 ctactaagggaagattacttggcacagaatgcatttacccc 28249 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 161 gacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaat 220 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28137 gacaagttctgtccattctacaagtctgtttggatgatgcgcaacattattcatttcaat 28078 Query: 221 caattagcgaatcagg 236 |||||| ||||||| Sbjct: 28077 acattagcaaatcagg 28062 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 329 caaaagttcgaagaccctgcagaaggcgaagacgtccttgtcgcgaaattccagaagtta 388 |||||||| || ||||||||||| || ||||| ||||| ||||| ||||||||||| || Sbjct: 26842 caaaagtttgaggaccctgcagagggtgaagatgtcctagtcgcaaaattccagaaattg 26783 Query: 389 tacgacgaccttaccgccgggttccgcaacctagaagacgaggctaggt 437 || || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 26782 tatgatgacctcacaaccggattccgcaacctagaagatgaagctaggt 26734 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 234 aggctgtggagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaaga 293 ||||||||||||| ||||| |||||||||||||| || ||||| ||| ||| ||||| Sbjct: 27033 aggctgtggagcgtgcagctaatgctgatggacaaaaaataacatacagtgtcataaagc 26974 Query: 294 gtcgcatgggtgatctattttaccgcct 321 ||| ||||||||||||||||| ||||| Sbjct: 26973 atcgtatgggtgatctattttatcgcct 26946 Score = 65.9 bits (33), Expect = 1e-07 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccag 58 |||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 28664 gaacaaaagctcgtgaagtgttacagag-agaggacgatctaaatgaaattgtccag 28609
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 56 cagcttgttggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaa 115 ||||||||||||||||||||||||| ||||||||| |||||||| ||||| |||||||| Sbjct: 159214 cagcttgttggtaaagatgcactggcagaatctgataagattacattggaaacagccaag 159155 Query: 116 cttctgagggaagattatttggcacagaacgcttttacccc 156 || || ||||||||||| ||||||||||| || |||||||| Sbjct: 159154 ctactaagggaagattacttggcacagaatgcatttacccc 159114 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 161 gacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttcaat 220 ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 159002 gacaagttctgtccattctacaagtctgtttggatgatgcgcaacattattcatttcaat 158943 Query: 221 caattagcgaatcagg 236 |||||| ||||||| Sbjct: 158942 acattagcaaatcagg 158927 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 329 caaaagttcgaagaccctgcagaaggcgaagacgtccttgtcgcgaaattccagaagtta 388 |||||||| || ||||||||||| || ||||| ||||| ||||| ||||||||||| || Sbjct: 157707 caaaagtttgaggaccctgcagagggtgaagatgtcctagtcgcaaaattccagaaattg 157648 Query: 389 tacgacgaccttaccgccgggttccgcaacctagaagacgaggctaggt 437 || || ||||| || |||| ||||||||||||||||| || ||||||| Sbjct: 157647 tatgatgacctcacaaccggattccgcaacctagaagatgaagctaggt 157599 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 234 aggctgtggagcgagcagccaatgctgatggacacaagataacctacgccgtcgtaaaga 293 ||||||||||||| ||||| |||||||||||||| || ||||| ||| ||| ||||| Sbjct: 157898 aggctgtggagcgtgcagctaatgctgatggacaaaaaataacatacagtgtcataaagc 157839 Query: 294 gtcgcatgggtgatctattttaccgcct 321 ||| ||||||||||||||||| ||||| Sbjct: 157838 atcgtatgggtgatctattttatcgcct 157811 Score = 65.9 bits (33), Expect = 1e-07 Identities = 52/57 (91%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 2 gaactaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccag 58 |||| ||||| ||||||||||| ||||| |||||| ||||||||||||||||||||| Sbjct: 159529 gaacaaaagctcgtgaagtgttacagag-agaggacgatctaaatgaaattgtccag 159474
>emb|X98767.1|BVVATPASE B.vulgaris mRNA for subunit A of the V-type ATPase Length = 2394 Score = 111 bits (56), Expect = 3e-21 Identities = 173/212 (81%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||||| ||||||||||||||||||||||| |||||||| ||| || | || || Sbjct: 1561 gatgatctcaatgaaattgtccagcttgttggaaaagatgctttggctgagacggataaa 1620 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || ||||| || || || ||| |||||||||| ||| ||||||| || || ||||| Sbjct: 1621 atcactttggacactgcaaagcttttgagggaagactatctggcacaaaatgcatttaca 1680 Query: 155 ccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcat 214 |||| ||||| | ||| ||||||||||| || || |||||||||||||||||||| ||| Sbjct: 1681 gcatatgacaaattttgcccattctacaagtcagtctggatgatgcgcaacattatccat 1740 Query: 215 ttcaatcaattagcgaatcaggctgtggagcg 246 ||| | | || || ||||||||||||||||| Sbjct: 1741 ttctacaatttggccaatcaggctgtggagcg 1772
>gb|AF050673.1|AF050673 Gossypium hirsutum vacuolar H+-ATPase catalytic subunit mRNA, complete cds Length = 2378 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||||| |||||||||||||||||||| || || ||||| || | ||| | ||||| Sbjct: 1689 gatgatctgaatgaaattgtccagcttgtcggaaaggatgctctagctgaaacagacaaa 1748 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || | || || ||||||||| | |||||||||||| | || ||||| |||||||| Sbjct: 1749 atcacacttgaaactgccaaacttttaagggaagattatcttgctcagaatgcttttact 1808 Query: 155 ccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcat 214 ||||| || |||| || ||||||||||| || || |||||||||||||||||| ||||| Sbjct: 1809 ccatatgataagttctgcccattctacaagtccgtctggatgatgcgcaacattgttcat 1868 Query: 215 ttcaat 220 |||||| Sbjct: 1869 ttcaat 1874
>gb|L03186.1|COTATPASE Gossypium hirsutum vacuolar H+-ATPase catalytic subunit mRNA, complete cds Length = 2244 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||| | |||||||||||||||||||| || || ||||| || | ||| | || ||| Sbjct: 1638 gatgatttgaatgaaattgtccagcttgtaggaaaggatgctctagctgaaacggataag 1697 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || | || || || |||||| | |||||||||||| | || ||||| |||||||| Sbjct: 1698 atcacactagaaactgctaaacttttaagggaagattatcttgctcagaatgcttttact 1757 Query: 155 ccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcat 214 ||||| ||||||| ||||| |||||||| |||||||||||||||||||| ||| ||||| Sbjct: 1758 ccatatgacaagttctgtccgttctacaagtctgtttggatgatgcgcaatattgttcat 1817 Query: 215 ttcaat 220 |||||| Sbjct: 1818 ttcaat 1823
>gb|J03769.1|DARVHATPA Daucus carota 70kD vacuolar H+-ATPase mRNA, complete cds Length = 2397 Score = 103 bits (52), Expect = 7e-19 Identities = 198/243 (81%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||| ||||| || |||||||| || |||||||| ||||||||||||||||| ||||| Sbjct: 1594 aaagctcgtgaggttttgcagagg-gaagatgatctgaatgaaattgtccagctggttgg 1652 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 || ||||| || | |||| | || || ||||| || ||||| || || ||| | ||||| Sbjct: 1653 gaaggatgctctagcagaaacagataaaattaccttagagactgcaaagcttttaaggga 1712 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 |||||| | || ||||| || ||||| ||||| ||||| | |||||| || ||||| || Sbjct: 1713 ggattatcttgcccagaatgcatttactccatatgacaaattttgtcctttttacaagtc 1772 Query: 187 tgtttggatgatgcgcaacattattcatttcaatcaat-tagcgaatcaggctgtggagc 245 |||||||||||||||||| ||||| ||||| | |||| | || |||||||||||||||| Sbjct: 1773 tgtttggatgatgcgcaatattatccattttta-caatctggccaatcaggctgtggagc 1831 Query: 246 gag 248 ||| Sbjct: 1832 gag 1834
>emb|AJ278021.1|LES278021 Lycopersicon esculentum partial mRNA for putative V-type H+-ATPase catalytic subunit A Length = 777 Score = 99.6 bits (50), Expect = 1e-17 Identities = 164/201 (81%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||| ||||| ||| ||||||| |||||||| |||||||||||||| || ||||| || Sbjct: 577 aaagcccgtgaggtgctgcagagg-gaggatgacctaaatgaaattgttcaacttgtcgg 635 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 || ||||| |||| ||| | || |||||||| ||||| || || |||||| | ||||| Sbjct: 636 aaaggatgctctggctgaaacagataagattaccttggaaactgcaaaacttttaaggga 695 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 || || | ||||| || |||||||| ||||| || |||| || || ||||||||||| Sbjct: 696 ggactaccttgcacaaaatgcttttacgccatatgataagttctgccctttctacaaatc 755 Query: 187 tgtttggatgatgcgcaacat 207 ||||||||||||||||||||| Sbjct: 756 tgtttggatgatgcgcaacat 776
>gb|U15604.1|BNU15604 Brassica napus tonoplast ATPase 70 kDa subunit mRNA, complete cds Length = 2201 Score = 93.7 bits (47), Expect = 7e-16 Identities = 185/230 (80%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 19 gtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttggtaaagatgcact 78 ||||||||||| || |||||||| |||||||||||||||||||| || |||||||| || Sbjct: 1495 gtgttgcagagg-gaagatgatcttaatgaaattgtccagcttgtgggaaaagatgcgct 1553 Query: 79 gggagaatctgacaagattacgttggagacagccaaacttctgagggaagattatttggc 138 | ||| ||||||||| || ||||| ||||| || || |||| ||||| || | || Sbjct: 1554 agctgaaggtgacaagatcaccttggaaacagctaagctgttgagagaagactaccttgc 1613 Query: 139 acagaacgcttttaccccatacgacaagtattgtccattctacaaatctgtttggatgat 198 || |||||||| || ||||| ||||||| || || |||||||| ||||| |||||||| Sbjct: 1614 tcaaaacgctttcacaccatatgacaagttctgccctttctacaagtctgtgtggatgat 1673 Query: 199 gcgcaacattattcatttcaatcaattagcgaatcaggctgtggagcgag 248 ||| |||||||| || ||| | | |||| |||||||| |||||||||| Sbjct: 1674 gcgtaacattatccacttctacaacctagccaatcaggcggtggagcgag 1723
>gb|BT014583.1| Lycopersicon esculentum clone 134040F, mRNA sequence Length = 2415 Score = 91.7 bits (46), Expect = 3e-15 Identities = 163/201 (81%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||| ||||| ||| ||||||| |||||||| |||||||||||||| || ||||| || Sbjct: 1554 aaagcccgtgaggtgctgcagagg-gaggatgacctaaatgaaattgttcaacttgtcgg 1612 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 || ||||| |||| ||| | || |||||||| ||||| || || |||||| | ||||| Sbjct: 1613 aaaggatgctctggctgaaacagataagattaccttggaaactgcaaaacttttaaggga 1672 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 || || | ||||| || |||||||| ||||| || |||| || || ||||||||||| Sbjct: 1673 ggactaccttgcacaaaatgcttttacgccatatgataagttctgccctttctacaaatc 1732 Query: 187 tgtttggatgatgcgcaacat 207 |||||||||| |||||||||| Sbjct: 1733 tgtttggatgttgcgcaacat 1753
>gb|AY177247.1| Lycopersicon esculentum vacuolar H+-ATPase A1 subunit isoform mRNA, complete cds Length = 2370 Score = 91.7 bits (46), Expect = 3e-15 Identities = 163/201 (81%), Gaps = 1/201 (0%) Strand = Plus / Plus Query: 7 aaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgttgg 66 ||||| ||||| ||| ||||||| |||||||| |||||||||||||| || ||||| || Sbjct: 1515 aaagcccgtgaggtgctgcagagg-gaggatgacctaaatgaaattgttcaacttgtcgg 1573 Query: 67 taaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgaggga 126 || ||||| |||| ||| | || |||||||| ||||| || || |||||| | ||||| Sbjct: 1574 aaaggatgctctggctgaaacagataagattaccttggaaactgcaaaacttttaaggga 1633 Query: 127 agattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaaatc 186 || || | ||||| || |||||||| ||||| || |||| || || ||||||||||| Sbjct: 1634 ggactaccttgcacaaaatgcttttacgccatatgataagttctgccctttctacaaatc 1693 Query: 187 tgtttggatgatgcgcaacat 207 |||||||||| |||||||||| Sbjct: 1694 tgtttggatgttgcgcaacat 1714
>ref|NM_001036222.1| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.2 mRNA, complete cds Length = 2512 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1736 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1795 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1796 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1855 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1856 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1915
>ref|NM_106539.3| Arabidopsis thaliana VHA-A; ATP binding / hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechan> AT1G78900 (VHA-A) transcript variant AT1G78900.1 mRNA, complete cds Length = 2373 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1597 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1656 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1657 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1716 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1717 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1776
>gb|BT008383.1| Arabidopsis thaliana At1g78900 gene, complete cds Length = 1872 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1471 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1530 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1531 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1590 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1591 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1650
>gb|AY081296.1| Arabidopsis thaliana ATPase subunit A mRNA, complete cds Length = 2314 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1596 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1655 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1656 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1715 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1716 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1775
>gb|AY059909.1| Arabidopsis thaliana vacuolar type ATPase subunit A (F9K20.5) mRNA, complete cds Length = 2248 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1596 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1655 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1656 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1715 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1716 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1775
>dbj|AK221853.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit A, complete cds, clone: RAFL22-08-A11 Length = 1319 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 590 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 649 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 650 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 709 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 710 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 769
>emb|BX817720.1|CNS0AALL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2261 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1576 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1635 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1636 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1695 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1696 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1755
>gb|AY085759.1| Arabidopsis thaliana clone 17815 mRNA, complete sequence Length = 2314 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1596 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1655 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1656 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1715 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1716 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1775
>gb|BT002589.1| Arabidopsis thaliana vacuolar type ATPase subunit A (At1g78900) mRNA, complete cds Length = 1927 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1471 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1530 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1531 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1590 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1591 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1650
>gb|U65638.1|ATU65638 Arabidopsis thaliana vacuolar type ATPase subunit A mRNA, complete cds Length = 2283 Score = 87.7 bits (44), Expect = 4e-14 Identities = 146/180 (81%) Strand = Plus / Plus Query: 38 gatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaagatt 97 ||||| |||||||||||||||||||| || |||||||| || | |||| ||||| || Sbjct: 1499 gatcttaatgaaattgtccagcttgtaggaaaagatgcgctagcagaaggggacaaaatc 1558 Query: 98 acgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacccca 157 || ||||| ||||| || || ||||||||||||| | || || ||||| ||||| ||| Sbjct: 1559 acattggaaacagctaagctattgagggaagattaccttgctcaaaacgcgtttacacca 1618 Query: 158 tacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 || ||||| | ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 1619 tatgacaaattctgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 1678
>dbj|AB004247.1| Citrus unshiu mRNA for H+-ATPase catalytic subunit, complete cds Length = 2304 Score = 83.8 bits (42), Expect = 6e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 92 aagattacgttggagacagccaaacttctgagggaagattatttggcacagaacgctttt 151 ||||||||| | ||||| || || ||| ||||||| || ||| | || |||||||| ||| Sbjct: 1569 aagattacgctagagactgctaagcttttgagggaggactatcttgctcagaacgcattt 1628 Query: 152 accccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattatt 211 || ||||| ||||||| || || |||||||| ||||||||||||||||| |||||||| Sbjct: 1629 actccatatgacaagttctgccctttctacaagtctgtttggatgatgcgtaacattatc 1688 Query: 212 catttc 217 |||||| Sbjct: 1689 catttc 1694
>emb|AJ276326.1|MCR276326 Mesembryanthemum crystallinum mRNA for putative vacuolar ATP synthase subunit A (vatA gene) Length = 2396 Score = 81.8 bits (41), Expect = 2e-12 Identities = 172/215 (80%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||||| |||||||||||||||||||| || ||||||||| ||| || | ||||| Sbjct: 1619 gatgatctgaatgaaattgtccagcttgtcgggaaagatgcattggccgagacagacaaa 1678 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || |||||||| || || ||| |||||||||| || | ||||| || || ||||| Sbjct: 1679 atcactttggagaccgcaaagcttttgagggaagactaccttgcacaaaatgcgtttaca 1738 Query: 155 ccatacgacaagtattgtccattc---tacaaatctgtttggatgatgcgcaacattatt 211 ||||| ||||| | ||| || ||| ||||| || || ||||||||||||||||| ||| Sbjct: 1739 ccatatgacaaattttgcccgttcgtttacaagtcagtctggatgatgcgcaacatcatt 1798 Query: 212 catttcaatcaattagcgaatcaggctgtggagcg 246 |||||| || | || || ||| |||| |||||||| Sbjct: 1799 catttctataatttggctaataaggcggtggagcg 1833 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 329 caaaagttcgaagaccctgcagaaggcgaagacgtccttgtcgcgaaattccagaagtta 388 ||||| ||||| |||||||| ||||| |||||| || ||||| |||||||||||||| Sbjct: 1916 caaaaattcgaggaccctgctgaaggagaagacactctcgtcgcaaaattccagaagttg 1975 Query: 389 tacga 393 ||||| Sbjct: 1976 tacga 1980
>gb|AY178911.1| Lycopersicon esculentum vacuolar H+-ATPase A2 subunit isoform mRNA, complete cds Length = 2401 Score = 67.9 bits (34), Expect = 4e-08 Identities = 148/186 (79%) Strand = Plus / Plus Query: 32 gaggatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgac 91 |||||||| |||||||||||||| || ||||||||||||||||| || | ||| | || Sbjct: 1602 gaggatgacctaaatgaaattgtgcaacttgttggtaaagatgctctagctgaaacagat 1661 Query: 92 aagattacgttggagacagccaaacttctgagggaagattatttggcacagaacgctttt 151 || || || ||||| || || || ||| ||||||| || || | ||||| || || ||| Sbjct: 1662 aaaatcactttggaaactgcaaagcttttgagggaggactaccttgcacaaaatgcattt 1721 Query: 152 accccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattatt 211 || || |||||||| | ||||| |||||||| |||||||||||| | || || ||||| Sbjct: 1722 actccgtacgacaaattctgtcctttctacaagtctgtttggatgttacggaatattatc 1781 Query: 212 catttc 217 |||||| Sbjct: 1782 catttc 1787
>dbj|AB189963.1| Pyrus communis PcVHA-A1 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2236 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 120 tgagggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattct 179 ||||||| |||||| | ||||||||||| ||||| ||||| ||||||| || ||||||| Sbjct: 1622 tgagggaggattatcttgcacagaacgcatttactccatatgacaagttctgcccattct 1681 Query: 180 acaaatctgtttggatgatgcg 201 |||| || || ||||||||||| Sbjct: 1682 acaagtccgtctggatgatgcg 1703 Score = 40.1 bits (20), Expect = 8.5 Identities = 80/100 (80%) Strand = Plus / Plus Query: 300 tgggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaag 359 |||| ||||| ||||||||||| || || |||||||| || || || || ||||| |||| Sbjct: 1802 tgggagatctcttttaccgcctagtgtctcaaaagtttgaggatccggctgaaggggaag 1861 Query: 360 acgtccttgtcgcgaaattccagaagttatacgacgacct 399 | | ||||| || ||||| ||||| ||||||| ||||| Sbjct: 1862 aagctcttgtggcaaaatttaagaagctatacgaggacct 1901
>gb|U26709.1|VRU26709 Vigna radiata vacuolar H+-ATPase subunit A mRNA, complete cds Length = 2371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 169/213 (79%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 4 actaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgt 63 |||||||| |||||||| |||| || ||| ||||| || |||||||||||||||||||| Sbjct: 1522 actaaagctcgtgaagttctgcaaag-agaagatgacctgaatgaaattgtccagcttgt 1580 Query: 64 tggtaaagatgcactgggagaatctgacaagattacgttggagacagccaaacttctgag 123 || || ||||| | | ||| || ||||| || ||||| || || || ||| |||| Sbjct: 1581 gggcaaggatgctttagctgaaggagataagatcaccttggaaactgcaaagcttttgag 1640 Query: 124 ggaagattatttggcacagaacgcttttaccccatacgacaagtattgtccattctacaa 183 || |||||| | || || || || ||||| ||||| ||||| | ||||| |||||||| Sbjct: 1641 agaggattatcttgctcaaaatgcctttacaccatatgacaaattctgtcccttctacaa 1700 Query: 184 atctgtttggatgatgcgcaacattattcattt 216 ||||||||||||||||| |||||||| ||||| Sbjct: 1701 gtctgtttggatgatgcgtaacattatccattt 1733
>dbj|AB036926.1| Citrus unshiu Cit-VATP A-1 gene for vacuolar H+-ATPase A subunit, partial cds Length = 3431 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 176 ttctacaaatctgtttggatgatgcgcaacattattcatttc 217 |||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2772 ttctacaagtctgtttggatgatgcgtaacattatccatttc 2813
>gb|AF367445.1| Prunus persica clone AtpvA1 V-ATPase catalytic subunit A (atpvA1) mRNA, complete cds Length = 2336 Score = 58.0 bits (29), Expect = 4e-05 Identities = 143/181 (79%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||||| |||||||||||||| ||||| || || ||||| ||| ||| || ||| Sbjct: 1604 gatgatctgaatgaaattgtccaacttgtaggaaaggatgctttggctgaaggagataag 1663 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || || || || || || ||| |||||| |||||| | |||||||| || ||||| Sbjct: 1664 atcaccttagaaactgcaaagcttttgaggggggattatctcgcacagaatgcatttact 1723 Query: 155 ccatacgacaagtattgtccattctacaaatctgtttggatgatgcgcaacattattcat 214 ||||| ||||| | || || |||||||| ||||||||||||||||| || || |||||| Sbjct: 1724 ccatatgacaaattctgcccgttctacaagtctgtttggatgatgcggaatatcattcat 1783 Query: 215 t 215 | Sbjct: 1784 t 1784 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 300 tgggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaag 359 |||| ||||| |||||||||||||| || ||||| || || || || |||||||| |||| Sbjct: 1869 tgggagatctcttttaccgccttgtgtcacaaaaatttgaggatccggcagaaggggaag 1928 Query: 360 a 360 | Sbjct: 1929 a 1929
>ref|NM_101543.2| Arabidopsis thaliana unknown protein AT1G16820 mRNA, complete cds Length = 1073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 178 ctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 120 ctacaaatccgtgtggatgatgcgtaacattattcatttc 159
>gb|BT005755.1| Arabidopsis thaliana clone RAFL15-46-D24 (R50159) unknown protein (At1g16820) mRNA, complete cds Length = 1282 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 178 ctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 739 ctacaaatccgtgtggatgatgcgtaacattattcatttc 778
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 178 ctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 43398 ctacaaatccgtgtggatgatgcgtaacattattcatttc 43437
>gb|AC051629.3|AC051629 Arabidopsis thaliana chromosome I BAC F6I1 genomic sequence, complete sequence Length = 93677 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 178 ctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||||||| || ||||||||||| ||||||||||||||| Sbjct: 90095 ctacaaatccgtgtggatgatgcgtaacattattcatttc 90134
>dbj|AB189964.1| Pyrus communis PcVHA-A2 mRNA for vacuolar H+-ATPase catalytic subunit, complete cds Length = 2322 Score = 54.0 bits (27), Expect = 6e-04 Identities = 132/167 (79%) Strand = Plus / Plus Query: 35 gatgatctaaatgaaattgtccagcttgttggtaaagatgcactgggagaatctgacaag 94 |||||||| |||||||||||||| ||||| || || ||||| ||| ||| || ||| Sbjct: 1622 gatgatctcaatgaaattgtccaacttgtaggaaaggatgctttggctgaaggagataag 1681 Query: 95 attacgttggagacagccaaacttctgagggaagattatttggcacagaacgcttttacc 154 || || || ||||| || || || ||||||| |||||| | || ||||| || ||||| Sbjct: 1682 atcaccttagagactgcaaagctcttgagggaggattatcttgctcagaatgcatttact 1741 Query: 155 ccatacgacaagtattgtccattctacaaatctgtttggatgatgcg 201 ||||| ||||||| || ||||||||||| || || ||||||||||| Sbjct: 1742 ccatatgacaagttctgcccattctacaagtccgtctggatgatgcg 1788 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 300 tgggtgatctattttaccgccttgtatcccaaaagttcgaagaccctgcagaaggcgaag 359 |||| ||||| ||||||||||| || ||||||||||| || || || |||||||| |||| Sbjct: 1887 tgggagatctcttttaccgcctagtgtcccaaaagtttgaggatccggcagaaggggaag 1946 Query: 360 a 360 | Sbjct: 1947 a 1947
>dbj|AK220704.1| Arabidopsis thaliana mRNA for vacuolar-type H+-ATPase subunit A, complete cds, clone: RAFL21-99-K21 Length = 648 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Plus Query: 170 tgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 51 tgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 98
>gb|DQ056751.1| Vigna unguiculata vacuolar H+-ATPase subunit A mRNA, partial cds Length = 1125 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 170 tgtccattctacaaatctgtttggatgatgcg 201 ||||| |||||||| ||||||||||||||||| Sbjct: 1094 tgtcccttctacaagtctgtttggatgatgcg 1125 Score = 48.1 bits (24), Expect = 0.035 Identities = 52/60 (86%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 4 actaaagcacgtgaagtgttgcagagnagaggatgatctaaatgaaattgtccagcttgt 63 |||||||| |||||||| |||| || ||| ||||| || |||||||||||||||||||| Sbjct: 929 actaaagctcgtgaagttctgcaaag-agaagatgacctgaatgaaattgtccagcttgt 987
>gb|AC005679.1|F9K20 Arabidopsis thaliana chromosome 1 BAC F9K20 sequence, complete sequence Length = 90425 Score = 48.1 bits (24), Expect = 0.035 Identities = 42/48 (87%) Strand = Plus / Minus Query: 170 tgtccattctacaaatctgtttggatgatgcgcaacattattcatttc 217 ||||| |||||||| || || ||||||||||| |||||||| |||||| Sbjct: 13773 tgtcctttctacaagtccgtgtggatgatgcgtaacattatccatttc 13726
>gb|AC097529.2| Homo sapiens BAC clone RP11-669F3 from 4, complete sequence Length = 54264 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 599 ttttttcaggattttacattat 620 |||||||||||||||||||||| Sbjct: 28707 ttttttcaggattttacattat 28728
>gb|BC079948.1| Xenopus tropicalis MGC79685 protein, mRNA (cDNA clone MGC:79685 IMAGE:6980744), complete cds Length = 4190 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 accccatacgacaagtattgtccattctacaaa 184 ||||||||||||| || ||||||||||||||| Sbjct: 1715 accccatacgacaggttctgtccattctacaaa 1747
>gb|BC072086.1| Xenopus laevis cDNA clone IMAGE:4406247, containing frame-shift errors Length = 2793 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 accccatacgacaagtattgtccattctacaaa 184 ||||||||||||| || ||||||||||||||| Sbjct: 1719 accccatacgacaggttctgtccattctacaaa 1751
>gb|BC098963.1| Xenopus laevis cDNA clone MGC:114675 IMAGE:5516350, complete cds Length = 4567 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 accccatacgacaagtattgtccattctacaaa 184 ||||||||||||| || ||||||||||||||| Sbjct: 1746 accccatacgacaggttctgtccattctacaaa 1778
>gb|AC016822.9| Homo sapiens chromosome 10 clone RP11-430K23, complete sequence Length = 172367 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 attattcatttcaatcaatta 226 ||||||||||||||||||||| Sbjct: 19065 attattcatttcaatcaatta 19045
>ref|NM_001007511.1| Xenopus tropicalis MGC79685 protein (MGC79685), mRNA Length = 4190 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 152 accccatacgacaagtattgtccattctacaaa 184 ||||||||||||| || ||||||||||||||| Sbjct: 1715 accccatacgacaggttctgtccattctacaaa 1747
>ref|XM_632049.1| Dictyostelium discoideum ABC transporter C family protein (DDB0219975), partial mRNA Length = 4056 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 gcaacattattcatttcaatcaat 224 ||||||||||||||||||| |||| Sbjct: 3049 gcaacattattcatttcaaacaat 3072
>ref|XM_429499.1| PREDICTED: Gallus gallus LOC417351 (LOC417351), mRNA Length = 686 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 517 tttgcttttgcttcaccgga 536 |||||||||||||||||||| Sbjct: 133 tttgcttttgcttcaccgga 114
>emb|AL096764.11|HSJ298J18 Human DNA sequence from clone RP1-298J18 on chromosome Xq22.3-24 Contains a 60S ribosomal protein (RPL18A), the gene for an uncharacterized hematopoietic stem/progenitor cells protein MDS031, the 5' end of a novel gene and a CpG island, complete sequence Length = 99332 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 gtattgtccattctacaaat 185 |||||||||||||||||||| Sbjct: 67717 gtattgtccattctacaaat 67736
>gb|AF474338.1| Dictyostelium discoideum ABC transporter ABCC.6 (abcC6) gene, complete cds Length = 4775 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 gcaacattattcatttcaatcaat 224 ||||||||||||||||||| |||| Sbjct: 3690 gcaacattattcatttcaaacaat 3713
>emb|CR391627.1| Gallus gallus finished cDNA, clone ChEST893o3 Length = 1074 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 cagacagacagccttgtttt 602 |||||||||||||||||||| Sbjct: 728 cagacagacagccttgtttt 747 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,763,126 Number of Sequences: 3902068 Number of extensions: 5763126 Number of successful extensions: 116295 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116057 Number of HSP's gapped (non-prelim): 207 length of query: 621 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 598 effective length of database: 17,143,297,704 effective search space: 10251692026992 effective search space used: 10251692026992 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
