ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63c02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 632 bits (319), Expect = e-178 Identities = 517/583 (88%) Strand = Plus / Plus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 150 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 209 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 167 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 210 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 269 Query: 168 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 227 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 270 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 329 Query: 228 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 287 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 330 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 389 Query: 288 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 347 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 390 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 449 Query: 348 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 407 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 450 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 509 Query: 408 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 467 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 510 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 569 Query: 468 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 527 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 570 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 629 Query: 528 aacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagcttat 587 |||||||||||||| ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 630 aacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagcttac 689 Query: 588 gcaaggatgatgattgagggcttcaagatgaacttgatctact 630 ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 690 gcaagaatgatgatcgagggcttcaagatgaacttgatctact 732
>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full insert sequence Length = 2837 Score = 632 bits (319), Expect = e-178 Identities = 517/583 (88%) Strand = Plus / Plus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 78 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 137 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 167 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 138 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 197 Query: 168 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 227 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 198 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 257 Query: 228 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 287 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 258 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 317 Query: 288 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 347 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 318 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 377 Query: 348 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 407 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 378 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 437 Query: 408 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 467 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 438 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 497 Query: 468 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 527 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 498 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 557 Query: 528 aacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagcttat 587 |||||||||||||| ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 558 aacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagcttac 617 Query: 588 gcaaggatgatgattgagggcttcaagatgaacttgatctact 630 ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 618 gcaagaatgatgatcgagggcttcaagatgaacttgatctact 660
>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full insert sequence Length = 1662 Score = 632 bits (319), Expect = e-178 Identities = 517/583 (88%) Strand = Plus / Plus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 151 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 210 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcctt 167 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 211 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcctc 270 Query: 168 gagatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggc 227 ||||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| ||| Sbjct: 271 gagatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggc 330 Query: 228 gatcactgccacggtgtcatcggccagctaacagaggactggggggaagtgctcttctct 287 |||| |||| | ||||||||||||||||| || ||||| ||||| || ||||| ||||| Sbjct: 331 gatcgctgcgatggtgtcatcggccagctgacggaggagtggggagaggtgctgttctcg 390 Query: 288 gccctcaagcgcgctggtgggacagccttcagcaatatggctgtcgggtacaacaacgtt 347 || || |||||||| || || |||||||||||||| ||||| ||||||||||||||||| Sbjct: 391 gcgctgaagcgcgccggcggaacagccttcagcaacatggccgtcgggtacaacaacgtc 450 Query: 348 gacgtcgatgctgccaacaagaacggcatcgccatcggcaacacacctggggttcttact 407 ||||| || || ||||| | ||||||||||||| |||||||||| ||||| ||||| || Sbjct: 451 gacgtggaggccgccaataggaacggcatcgccgtcggcaacacgcctggcgttctgacg 510 Query: 408 gagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgag 467 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||| ||| Sbjct: 511 gagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggaggatcgtggag 570 Query: 468 gccgaccaattcatgagggctggcctctacgacggatggctcccgcacctgtttgttggg 527 || || || |||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 571 gcagatcagttcatgagggctggcctctacgacggatggctcccgcacctgttcgtgggg 630 Query: 528 aacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagcttat 587 |||||||||||||| ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 631 aacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagcttac 690 Query: 588 gcaaggatgatgattgagggcttcaagatgaacttgatctact 630 ||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 691 gcaagaatgatgatcgagggcttcaagatgaacttgatctact 733
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 399 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 458 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 82214 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 82155 Query: 459 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 518 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 82154 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 82095 Query: 519 t 519 | Sbjct: 82094 t 82094 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 82804 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 82745 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 166 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 82744 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 82686 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 252 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 311 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 82443 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 82384 Query: 312 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 371 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 82383 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 82324 Query: 372 ggcatcgccatcggcaacacacctg 396 ||||||||| |||||||||| |||| Sbjct: 82323 ggcatcgccgtcggcaacacgcctg 82299 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 169 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 228 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 82594 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 82535 Query: 229 atcactgccacggtgtcatcggccag 254 ||| |||| | ||||||||||||||| Sbjct: 82534 atcgctgcgatggtgtcatcggccag 82509 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 525 gggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagct 584 ||||||||||||||||| ||||| || ||||| || |||||||| || |||||||||||| Sbjct: 81997 gggaacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagct 81938 Query: 585 tatgcaaggatgatg 599 || ||||| |||||| Sbjct: 81937 tacgcaagaatgatg 81923 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 603 gagggcttcaagatgaacttgatctact 630 |||||||||||||||||||||||||||| Sbjct: 81800 gagggcttcaagatgaacttgatctact 81773
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 399 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 458 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 76823 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 76764 Query: 459 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 518 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 76763 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 76704 Query: 519 t 519 | Sbjct: 76703 t 76703 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 77413 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 77354 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 166 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 77353 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 77295 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 252 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 311 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 77052 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 76993 Query: 312 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 371 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 76992 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 76933 Query: 372 ggcatcgccatcggcaacacacctg 396 ||||||||| |||||||||| |||| Sbjct: 76932 ggcatcgccgtcggcaacacgcctg 76908 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 169 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 228 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 77203 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 77144 Query: 229 atcactgccacggtgtcatcggccag 254 ||| |||| | ||||||||||||||| Sbjct: 77143 atcgctgcgatggtgtcatcggccag 77118 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 525 gggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagct 584 ||||||||||||||||| ||||| || ||||| || |||||||| || |||||||||||| Sbjct: 76606 gggaacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagct 76547 Query: 585 tatgcaaggatgatg 599 || ||||| |||||| Sbjct: 76546 tacgcaagaatgatg 76532 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 603 gagggcttcaagatgaacttgatctact 630 |||||||||||||||||||||||||||| Sbjct: 76409 gagggcttcaagatgaacttgatctact 76382
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 161 bits (81), Expect = 3e-36 Identities = 111/121 (91%) Strand = Plus / Minus Query: 399 gttcttactgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggagg 458 ||||| || |||||||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 31241 gttctgacggagacgacggcggagctggccgcgtctctgtcgctggcggcggcgcggagg 31182 Query: 459 atcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcacctg 518 ||||| ||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 31181 atcgtggaggcagatcagttcatgagggctggcctctacgacggatggctcccgcacctg 31122 Query: 519 t 519 | Sbjct: 31121 t 31121 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 48 atggcgaagccgatatcgattgaggtgtggaacccaagcggcaagtaccgcgtggtgagc 107 |||||||||||||||||||| ||||||||||| || ||||| ||||| |||||||||||| Sbjct: 31831 atggcgaagccgatatcgatcgaggtgtggaatccgagcggaaagtatcgcgtggtgagc 31772 Query: 108 accaagtccatgcctggcacccgctggatcaagctcctcactgacaacgactgccgcct 166 |||||||||||||| ||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 31771 accaagtccatgcccggcacccgctggatccgcctcctcgccgacaacgactgccgcct 31713 Score = 113 bits (57), Expect = 7e-22 Identities = 123/145 (84%) Strand = Plus / Minus Query: 252 cagctaacagaggactggggggaagtgctcttctctgccctcaagcgcgctggtgggaca 311 ||||| || ||||| ||||| || ||||| ||||| || || |||||||| || || ||| Sbjct: 31470 cagctgacggaggagtggggagaggtgctgttctcggcgctgaagcgcgccggcggaaca 31411 Query: 312 gccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgctgccaacaagaac 371 ||||||||||| ||||| ||||||||||||||||| ||||| || || ||||| | |||| Sbjct: 31410 gccttcagcaacatggccgtcgggtacaacaacgtcgacgtggaggccgccaataggaac 31351 Query: 372 ggcatcgccatcggcaacacacctg 396 ||||||||| |||||||||| |||| Sbjct: 31350 ggcatcgccgtcggcaacacgcctg 31326 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 169 agatatgcacggagaagaagaccatcctctccgtcgacgacatcctggctctcatcggcg 228 |||| |||||||||| ||||||||||||||| |||||||||||||| || ||||| |||| Sbjct: 31621 agatctgcacggagacgaagaccatcctctctgtcgacgacatcctcgccctcattggcg 31562 Query: 229 atcactgccacggtgtcatcggccag 254 ||| |||| | ||||||||||||||| Sbjct: 31561 atcgctgcgatggtgtcatcggccag 31536 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 525 gggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcggctcagct 584 ||||||||||||||||| ||||| || ||||| || |||||||| || |||||||||||| Sbjct: 31024 gggaacttgctcaagggtcagactgtgggagtcatcggagctggtcgaatcggctcagct 30965 Query: 585 tatgcaaggatgatg 599 || ||||| |||||| Sbjct: 30964 tacgcaagaatgatg 30950 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 603 gagggcttcaagatgaacttgatctact 630 |||||||||||||||||||||||||||| Sbjct: 30827 gagggcttcaagatgaacttgatctact 30800
>ref|NM_105471.2| Arabidopsis thaliana HPR; oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT1G68010 (HPR) mRNA, complete cds Length = 1494 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 318 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 377 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 378 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 437 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 438 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 497 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 498 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 557 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 558 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 617 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 618 gtggaagggttcaagatgaatttgatctacttt 650
>gb|AY113871.1| Arabidopsis thaliana putative hydroxypyruvate reductase (At1g68010) mRNA, complete cds Length = 1192 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 253 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 312 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 313 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 372 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 373 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 432 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 433 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 492 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 493 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 552 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 553 gtggaagggttcaagatgaatttgatctacttt 585
>gb|AF370221.1| Arabidopsis thaliana putative hydroxypyruvate reductase HPR (At1g68010) mRNA, complete cds Length = 1417 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 318 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 377 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 378 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 437 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 438 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 497 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 498 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 557 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 558 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 617 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 618 gtggaagggttcaagatgaatttgatctacttt 650
>dbj|D85339.1| Arabidopsis thaliana mRNA for hydroxypyruvate reductase, complete cds Length = 1428 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 333 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 392 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 393 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 452 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 453 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 512 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 513 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 572 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 573 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 632 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 633 gtggaagggttcaagatgaatttgatctacttt 665
>gb|AY099552.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1376 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 310 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 369 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 370 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 429 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 430 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 489 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 490 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 549 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 550 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 609 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 610 gtggaagggttcaagatgaatttgatctacttt 642
>emb|BX814872.1|CNS0ABHT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS14ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 283 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 342 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 343 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 402 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 403 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 462 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 463 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 522 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 523 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 582 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 583 gtggaagggttcaagatgaatttgatctacttt 615
>gb|BT001237.1| Arabidopsis thaliana hydroxypyruvate reductase (HPR) (At1g68010) mRNA, complete cds Length = 1194 Score = 113 bits (57), Expect = 7e-22 Identities = 264/333 (79%) Strand = Plus / Plus Query: 300 gctggtgggacagccttcagcaatatggctgtcgggtacaacaacgttgacgtcgatgct 359 ||||| |||| ||| ||||| || ||||| || || || ||||||||||| || || ||| Sbjct: 253 gctggagggaaagctttcagtaacatggccgttggttataacaacgttgatgttgaagct 312 Query: 360 gccaacaagaacggcatcgccatcggcaacacacctggggttcttactgagacgacggcg 419 ||||| ||| | || || || |||| ||||| || || || | |||||||||||||| Sbjct: 313 gccaataagtatggaattgctgtcggtaacactccgggagtgttgactgagacgacggct 372 Query: 420 gagctggcggcgtctctgtcggtggcggctgcccggaggatcgttgaggccgaccaattc 479 || || || || ||||| || |||| ||||| | || || ||||| |||||| ||||| Sbjct: 373 gaactagctgcttctctttccttggctgctgcaagaagaattgttgaagccgacgaattc 432 Query: 480 atgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctcaag 539 ||||| | |||| | ||||| |||||||| || || |||||||| |||||||| || || Sbjct: 433 atgagaggtggcttgtacgagggatggcttcctcatctgtttgtggggaacttacttaaa 492 Query: 540 gggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatgatg 599 || ||||| |||||||| ||||||||||| || || || || |||||||| || |||||| Sbjct: 493 ggacagactgttggagttattggagctggacgtattggatctgcttatgctagaatgatg 552 Query: 600 attgagggcttcaagatgaacttgatctacttt 632 | || || ||||||||||| |||||||||||| Sbjct: 553 gtggaagggttcaagatgaatttgatctacttt 585
>gb|U01067.1|PUMHPR Cucurbita pepo Halloween NADH-dependent hydroxypyruvate reductase mRNA, partial cds Length = 815 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 456 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 515 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 312 aggatcgttgaagctgacgagttcatgagggcaggccgctatgatggatggcttccaaat 371 Query: 516 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatc 575 |||||||||| |||||||| || || ||||| ||||| |||||||||||||| || || Sbjct: 372 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattggagctggtcgtatt 431 Query: 576 ggctcagcttatgcaaggatgatgattgagggcttcaagatgaacttgatctacttt 632 || || ||||||||||| |||||| | || || || ||||||||| ||||||||||| Sbjct: 432 ggatctgcttatgcaagaatgatggtagaagggtttaagatgaacctgatctacttt 488
>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1269 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Plus Query: 456 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 515 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 439 aggatcgttgaagctgacgagttcatgagggcaggccactatgatggatggcttccaaat 498 Query: 516 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatc 575 |||||||||| |||||||| || || ||||| ||||| |||||||||||||| || || Sbjct: 499 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattggagctggtcgtatt 558 Query: 576 ggctcagcttatgcaaggatgatgattgagggcttcaagatgaacttgatctacttt 632 || || ||||||||||| |||||| | || || || ||||||||| ||||||||||| Sbjct: 559 ggatctgcttatgcaagaatgatggtagaagggtttaagatgaacctgatctacttt 615 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 gtgagcaccaagtccatgcctggcacccgctggatcaa 139 |||||||||||| | |||||||| || ||||||||||| Sbjct: 85 gtgagcaccaagcctatgcctggaactcgctggatcaa 122
>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1362 Score = 103 bits (52), Expect = 7e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 456 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 515 ||||||||||| || ||| | ||||||||||| |||| ||| || |||||||| || | Sbjct: 439 aggatcgttgaagctgacgagttcatgagggcaggccactatgatggatggcttccaaat 498 Query: 516 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatc 575 |||||||||| |||||||| || || ||||| ||||| |||||||||||||| || || Sbjct: 499 ttgtttgttggaaacttgctgaaaggccagactgttggtgtgattggagctggtcgtatt 558 Query: 576 ggctcagcttatgcaaggatgatgattgagggcttcaagatgaacttgatctactt 631 || || ||||||||||| |||||| | || || || ||||||||| |||||||||| Sbjct: 559 ggatctgcttatgcaagaatgatggtagaagggtttaagatgaacctgatctactt 614 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 102 gtgagcaccaagtccatgcctggcacccgctggatcaa 139 |||||||||||| | |||||||| || ||||||||||| Sbjct: 85 gtgagcaccaagcctatgcctggaactcgctggatcaa 122
>gb|AF503361.1| Glycine max clone P42-2 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1414 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 501 ggatggctcccgcacctgtttgttgggaacttgctcaaggggcagaccgttggagtgatt 560 |||||||| || || || |||||||| ||||||||||||||||| || ||||| || ||| Sbjct: 496 ggatggctacctcatctatttgttggaaacttgctcaaggggcaaacagttggtgtaatt 555 Query: 561 ggagctggccgcatcggctcagcttatgcaaggatgatgattgagggcttcaagatgaac 620 |||||||| || || || || ||||||||||| |||||| |||| || |||||||||||| Sbjct: 556 ggagctggtcgaattggatctgcttatgcaagaatgatggttgaagggttcaagatgaac 615 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 66 attgaggtgtggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggc 125 |||||||| ||||||||||| ||||| ||| | || || |||||||| | |||||||| Sbjct: 61 attgaggtatggaacccaagtggcaaatacagagttgtcagcaccaaaccaatgcctgga 120 Query: 126 acccgctggatcaa 139 || || |||||||| Sbjct: 121 actcgttggatcaa 134
>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC 1.1.1.29) Length = 1437 Score = 93.7 bits (47), Expect = 7e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 517 tgtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcg 576 ||||||||||||||||||| || || ||||| ||||| |||||||||||||| || || | Sbjct: 510 tgtttgttgggaacttgctgaaaggacagactgttggtgtgattggagctggtcgtattg 569 Query: 577 gctcagcttatgcaaggatgatgattgagggcttcaagatgaacttgatctactt 631 | || ||||||||||| |||||| | || || || ||||||||| |||||||||| Sbjct: 570 gatctgcttatgcaagaatgatggtagaagggtttaagatgaacctgatctactt 624
>gb|AF503360.1| Glycine max clone P42-1 putative NADH-dependent hydroxypyruvate reductase mRNA, complete cds Length = 1492 Score = 89.7 bits (45), Expect = 1e-14 Identities = 135/165 (81%) Strand = Plus / Plus Query: 456 aggatcgttgaggccgaccaattcatgagggctggcctctacgacggatggctcccgcac 515 ||||| |||||||| || | ||||||||||| || | || || |||||||| || || Sbjct: 453 aggatagttgaggcagatgagttcatgagggcaggattatatgatggatggctacctcat 512 Query: 516 ctgtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatc 575 || |||||||| |||||||||||||| || || ||||| || ||||||||||| || || Sbjct: 513 ctatttgttggaaacttgctcaagggacaaactgttggtgtaattggagctggtcgaatt 572 Query: 576 ggctcagcttatgcaaggatgatgattgagggcttcaagatgaac 620 || || ||||||||||| |||||| |||| || |||||||||||| Sbjct: 573 ggatccgcttatgcaagaatgatggttgaagggttcaagatgaac 617 Score = 44.1 bits (22), Expect = 0.55 Identities = 61/74 (82%) Strand = Plus / Plus Query: 66 attgaggtgtggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggc 125 |||||||| ||||||||||| ||||| ||| | || || |||||||| | |||||||| Sbjct: 63 attgaggtatggaacccaagtggcaaatacagagttgttagcaccaaaccaatgcctgga 122 Query: 126 acccgctggatcaa 139 || || |||||||| Sbjct: 123 actcgttggatcaa 136
>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete cds Length = 1576 Score = 77.8 bits (39), Expect = 4e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 477 ttcatgagggctggcctctacgacggatggctcccgcacctgtttgttgggaacttgctc 536 ||||||||||| ||| | || || ||||||||||| | |||||||||| ||||||||| Sbjct: 464 ttcatgagggcaggcttatatgatggatggctccctaatttgtttgttggaaacttgctc 523 Query: 537 aaggggcagaccgttggagtgattggagctggccgcatcggctcagcttatgcaaggatg 596 || || ||||| ||||| || ||||||||||| || || || || |||||||| || ||| Sbjct: 524 aaaggacagactgttggtgtcattggagctggtcgtattggatctgcttatgctagaatg 583 Query: 597 atgattgagggcttcaagatgaa 619 ||| |||| || ||||| ||||| Sbjct: 584 atggttgaagggttcaaaatgaa 606 Score = 42.1 bits (21), Expect = 2.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 75 tggaacccaagcggcaagtaccgcgtggtgagcaccaagtccatgcctggcacccgctgg 134 ||||||||||| || | |||| | || || |||||||| ||||||| || ||||||||| Sbjct: 62 tggaacccaagaggaaggtacagagtagttagcaccaaacccatgcccggaacccgctgg 121 Query: 135 atcaa 139 ||||| Sbjct: 122 atcaa 126
>emb|X58542.1|CSHPRAG C.sativus hpr-A gene for NADH-dependent hydroxypyruvate reductase Length = 6740 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 518 gtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcgg 577 |||||||||||||||||| || || ||||| ||||| |||||||||||||| || || || Sbjct: 3179 gtttgttgggaacttgctgaaaggacagactgttggtgtgattggagctggtcgtattgg 3238 Query: 578 ctcagcttatgcaaggatgatg 599 || ||||||||||| |||||| Sbjct: 3239 atctgcttatgcaagaatgatg 3260
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 518 gtttgttgggaacttgctcaaggggcagaccgttggagtgattggagctggccgcatcgg 577 |||||| |||||||| || || || ||||| |||||||| ||||||||||| || || || Sbjct: 50138 gtttgtggggaacttacttaaaggacagactgttggagttattggagctggacgtattgg 50079 Query: 578 ctcagcttatgcaaggatgatg 599 || |||||||| || |||||| Sbjct: 50078 atctgcttatgctagaatgatg 50057 Score = 40.1 bits (20), Expect = 8.6 Identities = 83/104 (79%) Strand = Plus / Minus Query: 405 actgagacgacggcggagctggcggcgtctctgtcggtggcggctgcccggaggatcgtt 464 |||||||||||||| || || || || ||||| || |||| ||||| | || || ||| Sbjct: 50343 actgagacgacggctgaactagctgcttctctttccttggctgctgcaagaagaattgtt 50284 Query: 465 gaggccgaccaattcatgagggctggcctctacgacggatggct 508 || |||||| |||||||||| | |||| | ||||| |||||||| Sbjct: 50283 gaagccgacgaattcatgagaggtggcttgtacgagggatggct 50240 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 609 ttcaagatgaacttgatctacttt 632 ||||||||||| |||||||||||| Sbjct: 49958 ttcaagatgaatttgatctacttt 49935
>emb|AJ879065.1| Capsicum chinense partial mRNA for ABC transporter protein Length = 848 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 tcccctccttgcagctgctgcc 33 |||||||||||||||||||||| Sbjct: 164 tcccctccttgcagctgctgcc 143
>gb|AC009197.9| Drosophila melanogaster clone BACR14M08, complete sequence Length = 170053 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 540 gggcagaccgttggagtgattggagctgg 568 |||||||| |||||||| ||||||||||| Sbjct: 40478 gggcagacagttggagtcattggagctgg 40450
>ref|XM_418106.1| PREDICTED: Gallus gallus similar to ets domain protein (LOC419983), mRNA Length = 2681 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 gcagctgctgcccgcctgctc 42 ||||||||||||||||||||| Sbjct: 580 gcagctgctgcccgcctgctc 560
>ref|XM_845102.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-2, transcript variant 1 (LOC607779), mRNA Length = 1005 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gcggagctggcggcgtctctg 437 ||||||||||||||||||||| Sbjct: 559 gcggagctggcggcgtctctg 579
>ref|XM_855787.1| PREDICTED: Canis familiaris similar to Homeobox protein DLX-2, transcript variant 2 (LOC607779), mRNA Length = 939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 gcggagctggcggcgtctctg 437 ||||||||||||||||||||| Sbjct: 493 gcggagctggcggcgtctctg 513
>ref|XM_745604.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g08060) partial mRNA Length = 231 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 cctctccgtcgacgacatcct 214 ||||||||||||||||||||| Sbjct: 152 cctctccgtcgacgacatcct 172
>gb|DQ438981.1| Klebsiella oxytoca D-lactate dehydrogenase (ldhA) gene, complete cds Length = 990 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 332 cgggtacaacaacgttgacgtcgatgctgccaa 364 ||||| ||||||||||||| ||||||| ||||| Sbjct: 231 cgggttcaacaacgttgacctcgatgccgccaa 263
>gb|AC008182.2|AC008182 Drosophila melanogaster, chromosome 2L, region 29F6-30A4, BAC clone BACR48E15, complete sequence Length = 192350 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 540 gggcagaccgttggagtgattggagctgg 568 |||||||| |||||||| ||||||||||| Sbjct: 69634 gggcagacagttggagtcattggagctgg 69662
>gb|AC125435.8| Homo sapiens chromosome 15, clone CTD-2235H24, complete sequence Length = 124255 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tgaggtgtggaacccaagcgg 88 ||||||||||||||||||||| Sbjct: 97940 tgaggtgtggaacccaagcgg 97960
>gb|AC091230.23| Homo sapiens chromosome 15, clone RP11-414J4, complete sequence Length = 206482 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 tgaggtgtggaacccaagcgg 88 ||||||||||||||||||||| Sbjct: 17788 tgaggtgtggaacccaagcgg 17808
>gb|AE003623.2| Drosophila melanogaster chromosome 2L, section 32 of 83 of the complete sequence Length = 234635 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 540 gggcagaccgttggagtgattggagctgg 568 |||||||| |||||||| ||||||||||| Sbjct: 168712 gggcagacagttggagtcattggagctgg 168684
>gb|AY842251.1| Chlamydomonas reinhardtii hydroxypyruvate reductase mRNA, partial cds Length = 931 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gagacgacggcggagctggc 427 |||||||||||||||||||| Sbjct: 226 gagacgacggcggagctggc 245
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 actggggggaagtgctcttc 284 |||||||||||||||||||| Sbjct: 84787 actggggggaagtgctcttc 84806
>gb|AC132905.13| Mus musculus chromosome 13, clone RP24-295E18, complete sequence Length = 187116 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 611 caagatgaacttgatctact 630 |||||||||||||||||||| Sbjct: 23773 caagatgaacttgatctact 23754
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence Length = 177050 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 520 ttgttgggaacttgctcaag 539 |||||||||||||||||||| Sbjct: 58964 ttgttgggaacttgctcaag 58983
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cttgtttgtttcccctcctt 21 |||||||||||||||||||| Sbjct: 82001 cttgtttgtttcccctcctt 81982
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gcggcaagtaccgcgtggtg 104 |||||||||||||||||||| Sbjct: 2725274 gcggcaagtaccgcgtggtg 2725293 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 agctgctgcccgcctgctccagat 47 |||||||||||||||| ||||||| Sbjct: 2144193 agctgctgcccgcctgatccagat 2144170
>emb|AL359259.18| Human DNA sequence from clone RP11-182B22 on chromosome 1 Contains the 3' end of the MTR gene for 5-methyltetrahydrofolate-homocysteine methyltransferase, a novel gene (LOC149448), a ribosomal protein L35 (RPL35) pseudogene, and a novel gene similar to metallothionein 1H (MT1H), complete sequence Length = 172753 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 cttatgcaaggatgatgatt 602 |||||||||||||||||||| Sbjct: 105015 cttatgcaaggatgatgatt 105034
>gb|AE017159.1| Chlamydophila pneumoniae TW-183, section 3 of 4 of the complete genome Length = 300066 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agaagaagaccatcctctcc 200 |||||||||||||||||||| Sbjct: 262535 agaagaagaccatcctctcc 262516
>emb|AL049649.7|HSJ734C18 Human DNA sequence from clone RP4-734C18 on chromosome 20 Contains a putative novel gene, ESTs, STSs, GSSs and genomic marker D20S6, complete sequence Length = 135636 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ggcaacacacctggggttct 403 |||||||||||||||||||| Sbjct: 124976 ggcaacacacctggggttct 124957
>emb|Z99120.2|BSUB0017 Bacillus subtilis complete genome (section 17 of 21): from 3213330 to 3414388 Length = 201059 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 607 gcttcaagatgaacttgatc 626 |||||||||||||||||||| Sbjct: 200468 gcttcaagatgaacttgatc 200449
>emb|BX294146.1| Pirellula sp. strain 1 complete genome; segment 14/24 Length = 324450 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 cggcatcgccatcggcaaca 390 |||||||||||||||||||| Sbjct: 150262 cggcatcgccatcggcaaca 150281
>emb|AJ223978.1|BS43KBDNA Bacillus subtilis 42.7kB DNA fragment from yvsA to yvqA Length = 42782 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 607 gcttcaagatgaacttgatc 626 |||||||||||||||||||| Sbjct: 13458 gcttcaagatgaacttgatc 13477
>emb|AL672199.16| Mouse DNA sequence from clone RP23-171O21 on chromosome 11 Contains the Srcasm gene for Src activating and signaling molecule and the 3' end of a novel gene, complete sequence Length = 150260 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 ccctccttgcagctgctgcc 33 |||||||||||||||||||| Sbjct: 25755 ccctccttgcagctgctgcc 25774
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gatcaagctcctcactgaca 153 |||||||||||||||||||| Sbjct: 695112 gatcaagctcctcactgaca 695131
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gagacgacggcggagctggc 427 |||||||||||||||||||| Sbjct: 3006119 gagacgacggcggagctggc 3006138
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaagaagaccatcctctcc 200 |||||||||||||||||||| Sbjct: 1205047 agaagaagaccatcctctcc 1205066
>gb|AC154830.2| Mus musculus BAC clone RP24-553I3 from chromosome 13, complete sequence Length = 178942 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 caagatgaacttgatctact 630 |||||||||||||||||||| Sbjct: 20960 caagatgaacttgatctact 20979
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 85 gcggcaagtaccgcgtggtg 104 |||||||||||||||||||| Sbjct: 3428298 gcggcaagtaccgcgtggtg 3428279
>dbj|AK053655.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130119A05 product:macrophage stimulating 1 receptor (c-met-related tyrosine kinase), full insert sequence Length = 4719 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gacatcctggctctcatcgg 226 |||||||||||||||||||| Sbjct: 3625 gacatcctggctctcatcgg 3644
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agaagaagaccatcctctcc 200 |||||||||||||||||||| Sbjct: 866396 agaagaagaccatcctctcc 866377
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 agaagaagaccatcctctcc 200 |||||||||||||||||||| Sbjct: 865717 agaagaagaccatcctctcc 865698
>emb|BX296539.5| Zebrafish DNA sequence from clone DKEYP-13E2 in linkage group 15, complete sequence Length = 135623 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gtgtggaacccaagcggcaa 91 |||||||||||||||||||| Sbjct: 42030 gtgtggaacccaagcggcaa 42011 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,691,827 Number of Sequences: 3902068 Number of extensions: 4691827 Number of successful extensions: 77869 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77439 Number of HSP's gapped (non-prelim): 420 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
