ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62m22 |
|---|---|
| Clone Library Name | barley_pub |
>UBE13_WHEAT (P31252) Ubiquitin-activating enzyme E1 3| Length = 1053 Score = 377 bits (967), Expect = e-104 Identities = 187/194 (96%), Positives = 190/194 (97%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED Sbjct: 219 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 278 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TSNFG YVKGGIVTQVKEPKVLCFKALRDAMTDPG+ LLSDFSKFERPPVLHLAFQALDK Sbjct: 279 TSNFGIYVKGGIVTQVKEPKVLCFKALRDAMTDPGEVLLSDFSKFERPPVLHLAFQALDK 338 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRKLDTIDEKLFQQFASGSRAVLNPMAA 541 FKKDHGRCPAAGCE+DA SFLKIAAAINE SADRKLDTIDEKLF+QFASGSRAVLNPMAA Sbjct: 339 FKKDHGRCPAAGCEEDAHSFLKIAAAINEASADRKLDTIDEKLFRQFASGSRAVLNPMAA 398 Query: 542 MFGGIVGQEVVKAC 583 MFGGIVGQEVVKAC Sbjct: 399 MFGGIVGQEVVKAC 412
>UBE12_WHEAT (P31251) Ubiquitin-activating enzyme E1 2| Length = 1051 Score = 305 bits (782), Expect = 5e-83 Identities = 148/194 (76%), Positives = 170/194 (87%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 +ASISNDNPAL+SCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARP+SF +EED Sbjct: 216 VASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFFLEED 275 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TS+FG YV+GGIVTQVK PKV+ FK L++AM++PG+FL+SDFSKFERPP+LHLAFQALDK Sbjct: 276 TSSFGAYVRGGIVTQVKPPKVIKFKPLKEAMSEPGEFLMSDFSKFERPPLLHLAFQALDK 335 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRKLDTIDEKLFQQFASGSRAVLNPMAA 541 F+ + R P AG D Q ++ A +IN+T DRKL+ ID+KL FASGSRAVLNPMAA Sbjct: 336 FRTELSRFPVAGSTDDVQRVIEYAISINDTLGDRKLEEIDKKLLHHFASGSRAVLNPMAA 395 Query: 542 MFGGIVGQEVVKAC 583 MFGGIVGQEVVKAC Sbjct: 396 MFGGIVGQEVVKAC 409
>UBE11_WHEAT (P20973) Ubiquitin-activating enzyme E1 1| Length = 1051 Score = 305 bits (782), Expect = 5e-83 Identities = 148/194 (76%), Positives = 170/194 (87%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 +ASISNDNPAL+SCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARP+SF +EED Sbjct: 216 VASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPYSFFLEED 275 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TS+FG YV+GGIVTQVK PKV+ FK L++AM++PG+FL+SDFSKFERPP+LHLAFQALDK Sbjct: 276 TSSFGAYVRGGIVTQVKPPKVIKFKPLKEAMSEPGEFLMSDFSKFERPPLLHLAFQALDK 335 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRKLDTIDEKLFQQFASGSRAVLNPMAA 541 F+ + R P AG D Q ++ A +IN+T DRKL+ ID+KL FASGSRAVLNPMAA Sbjct: 336 FRTELSRFPVAGSTDDVQRVIEYAISINDTLGDRKLEEIDKKLLHHFASGSRAVLNPMAA 395 Query: 542 MFGGIVGQEVVKAC 583 MFGGIVGQEVVKAC Sbjct: 396 MFGGIVGQEVVKAC 409
>UBE1_RABIT (Q29504) Ubiquitin-activating enzyme E1| Length = 1058 Score = 170 bits (430), Expect = 3e-42 Identities = 87/195 (44%), Positives = 129/195 (66%), Gaps = 1/195 (0%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 ++ ++ DNP +++C+D+ R F+ GD V FSEV GMTELN +P ++K P++FSI D Sbjct: 221 VSMVTKDNPGVVTCLDEARHGFESGDFVSFSEVQGMTELNGNQPIEIKVLGPYTFSI-CD 279 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TSNF Y++GGIV+QVK PK + FK+L ++ +P DF+++DF+KF RP LH+ FQAL K Sbjct: 280 TSNFSDYIRGGIVSQVKVPKKISFKSLSASLAEP-DFVMTDFAKFSRPAQLHIGFQALHK 338 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAIN-ETSADRKLDTIDEKLFQQFASGSRAVLNPMA 538 F H R P E+DA + +A A+N + S+ + D++DE L + A + L P+ Sbjct: 339 FCAQHSRPPRPRNEEDAAELVTLARAVNSKASSAVQQDSLDEDLIRNLAFVAAGDLAPIN 398 Query: 539 AMFGGIVGQEVVKAC 583 A GG+ QEV+KAC Sbjct: 399 AFIGGLAAQEVMKAC 413
>UBE1_HUMAN (P22314) Ubiquitin-activating enzyme E1 (A1S9 protein)| Length = 1058 Score = 164 bits (416), Expect = 1e-40 Identities = 84/195 (43%), Positives = 127/195 (65%), Gaps = 1/195 (0%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 ++ ++ DNP +++C+D+ R F+ GD V FSEV GM ELN +P ++K P++FSI D Sbjct: 221 VSMVTKDNPGVVTCLDEARHGFESGDFVSFSEVQGMVELNGNQPMEIKVLGPYTFSI-CD 279 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TSNF Y++GGIV+QVK PK + FK+L ++ +P DF+++DF+KF RP LH+ FQAL + Sbjct: 280 TSNFSDYIRGGIVSQVKVPKKISFKSLVASLAEP-DFVVTDFAKFSRPAQLHIGFQALHQ 338 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAINETSADR-KLDTIDEKLFQQFASGSRAVLNPMA 538 F HGR P E+DA + +A A+N + + + +DE L ++ A + L P+ Sbjct: 339 FCAQHGRPPRPRNEEDAAELVALAQAVNARALPAVQQNNLDEDLIRKLAYVAAGDLAPIN 398 Query: 539 AMFGGIVGQEVVKAC 583 A GG+ QEV+KAC Sbjct: 399 AFIGGLAAQEVMKAC 413
>UBE1_MOUSE (Q02053) Ubiquitin-activating enzyme E1 1| Length = 1058 Score = 158 bits (400), Expect = 9e-39 Identities = 82/195 (42%), Positives = 127/195 (65%), Gaps = 1/195 (0%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 ++ ++ DNP +++C+D+ R F+ GD V FSEV GM +LN +P ++K P++FSI D Sbjct: 221 VSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSI-CD 279 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 TSNF Y++GGIV+QVK PK + FK+L ++ +P DF+++DF+K+ RP LH+ FQAL + Sbjct: 280 TSNFSDYIRGGIVSQVKVPKKISFKSLPASLVEP-DFVMTDFAKYSRPAQLHIGFQALHQ 338 Query: 362 FKKDHGRCPAAGCEQDAQSFLKIAAAINETSADR-KLDTIDEKLFQQFASGSRAVLNPMA 538 F H + P E+DA + +A A+N S K +++DE L ++ A + L P+ Sbjct: 339 FCALHNQPPRPRNEEDATELVGLAQAVNARSPPSVKQNSLDEDLIRKLAYVAAGDLAPIN 398 Query: 539 AMFGGIVGQEVVKAC 583 A GG+ QEV+KAC Sbjct: 399 AFIGGLAAQEVMKAC 413
>UBA1_YEAST (P22515) Ubiquitin-activating enzyme E1 1| Length = 1024 Score = 125 bits (315), Expect = 7e-29 Identities = 71/186 (38%), Positives = 111/186 (59%), Gaps = 3/186 (1%) Frame = +2 Query: 35 ISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEEDTSNFGTYVKGG 214 ++ +DD R +DG+ V FSEV G+ +LNDG KV+ PF+F I +G Y KGG Sbjct: 195 VTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRI-GSVKEYGEYKKGG 253 Query: 215 IVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDKFKKDH-GRCPA 391 I T+VK P+ + FK+L+ +++P +F+ SDF+KF+R LHL FQAL +F H G P Sbjct: 254 IFTEVKVPRKISFKSLKQQLSNP-EFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPR 312 Query: 392 AGCEQDAQSFLKIAAAINETSADRKLDTID--EKLFQQFASGSRAVLNPMAAMFGGIVGQ 565 ++DA +K+ ++ + + +D E L ++ + +R + + A FGG+V Q Sbjct: 313 TMNDEDANELIKLVTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQ 372 Query: 566 EVVKAC 583 EV+KAC Sbjct: 373 EVLKAC 378
>UBA1_SCHPO (O94609) Ubiquitin-activating enzyme E1 1 (Poly(A)+ RNA transport| protein 3) Length = 1012 Score = 122 bits (306), Expect = 7e-28 Identities = 77/195 (39%), Positives = 113/195 (57%), Gaps = 2/195 (1%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEED 181 IASI++D +++ +++ R ++GD V F+EV GM LNDG PRKV+ P++FSI Sbjct: 185 IASITDDG--VVTMLEETRHGLENGDFVKFTEVKGMPGLNDGTPRKVEVKGPYTFSI-GS 241 Query: 182 TSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALDK 361 + G+ G+ TQVK P + FK+LR+++ DP +++ DF K RPP H+AFQAL Sbjct: 242 VKDLGSAGYNGVFTQVKVPTKISFKSLRESLKDP-EYVYPDFGKMMRPPQYHIAFQALSA 300 Query: 362 FKKDH-GRCPAAGCEQDAQSFLKIAAAINETSADRKLDT-IDEKLFQQFASGSRAVLNPM 535 F H G P + DA F + I T + D +DEKL ++ + +R L M Sbjct: 301 FADAHEGSLPRPRNDIDAAEFFEFCKKIAST---LQFDVELDEKLIKEISYQARGDLVAM 357 Query: 536 AAMFGGIVGQEVVKA 580 +A GG V QEV+KA Sbjct: 358 SAFLGGAVAQEVLKA 372
>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)| Length = 1011 Score = 90.5 bits (223), Expect = 3e-18 Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 4/184 (2%) Frame = +2 Query: 2 IASISNDNPALISCVDDERLE-FQDGDLVVFSEVHGMTELNDGKPRKVKNARPFSFSIEE 178 I IS +P +++ F+DGDLV FS + GM ELND PR + S I Sbjct: 181 IQHISQGSPGILTLRKGANTHYFRDGDLVTFSGIEGMVELNDCDPRSIHVREDGSLEI-G 239 Query: 179 DTSNFGTYVKGGIVTQVKEPKVLCFKALRDAMTDPGDFLLSDFSKFERPPVLHLAFQALD 358 DT+ F Y++GG +T+VK PK + K+L A+ P + + LH AF AL Sbjct: 240 DTTTFSRYLRGGAITEVKRPKTVRHKSLDTALLQP-HVVAQSSQEVHHAHCLHQAFCALH 298 Query: 359 KFKKDHGRCPAAGCEQDAQSFLKIA---AAINETSADRKLDTIDEKLFQQFASGSRAVLN 529 KF+ HGR P DA++ + +A + T + + +DE L + A S L Sbjct: 299 KFQHLHGRPPQPWDPVDAETVVGLARDLEPLKRTEEEPLEEPLDEALVRTVALSSARCLE 358 Query: 530 PMAA 541 PM A Sbjct: 359 PMVA 362
>ULA1_MACFA (Q4R3L6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 510 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 287 DFLLSDFSKFERPPVLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRK 466 D ++S + VL+L +A+D+F K HGR P Q + K+ + + + Sbjct: 386 DEIISSMDNPDNEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYG 445 Query: 467 LDT-IDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 L + + +F A + +AA GG QEV+K Sbjct: 446 LSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIK 483
>ULA1_RAT (Q9Z1A5) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 287 DFLLSDFSKFERPPVLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRK 466 D ++S + VL+L +A+D+F K HGR P Q + K+ + + + Sbjct: 410 DEIISSMDNPDNEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYG 469 Query: 467 LDT-IDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 L + + +F A + +AA GG QEV+K Sbjct: 470 LSVMVKDDYVHEFCRYGAAEPHTVAAFLGGAAAQEVIK 507
>ULA1_MOUSE (Q8VBW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) Length = 534 Score = 42.0 bits (97), Expect = 0.001 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 287 DFLLSDFSKFERPPVLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRK 466 D ++S + VL+L +A+D+F K HGR P Q + K+ + + + Sbjct: 410 DEIISSMDNPDNEIVLYLMLRAVDRFHKQHGRYPGVSNYQVEEDIGKLKSCLTGFLQEYG 469 Query: 467 LDT-IDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 L + + +F A + +AA GG QEV+K Sbjct: 470 LSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIK 507
>ULA1_CHICK (Q5ZIE6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 535 Score = 41.2 bits (95), Expect = 0.002 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 287 DFLLSDFSKFERPPVLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRK 466 D ++S+ + VL+L +A+D+F K HGR P Q K+ + + + Sbjct: 411 DEIISNMDNPDSEVVLYLMLRAVDRFYKQHGRYPGVYNYQVEDDIGKLKSCLTSFLQEHG 470 Query: 467 LDT-IDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 L + + +F A + +AA GG QE++K Sbjct: 471 LSVLVKDDYVHEFCRYGAAEPHAIAAFMGGAAAQEIIK 508
>ULA1_XENLA (Q6NTW6) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%) Frame = +2 Query: 329 VLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRKLD-TIDEKLFQQFA 505 VL+L +A+D+F+K GR P Q K+ + +N + L T+ ++ Q+F Sbjct: 423 VLYLMLRAVDRFQKQLGRYPGIYNYQIESDIGKLKSCLNGLLQEYGLSLTVKDEYIQEFC 482 Query: 506 SGSRAVLNPMAAMFGGIVGQEVVK 577 A + +A+ GG QE +K Sbjct: 483 RYGAAEPHTIASFLGGAAAQEAIK 506
>ULA1_HUMAN (Q13564) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (Amyloid beta precursor protein-binding protein 1, 59 kDa) (APP-BP1) (Protooncogene protein 1) (HPP1) Length = 534 Score = 38.9 bits (89), Expect = 0.011 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Frame = +2 Query: 287 DFLLSDFSKFERPPVLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRK 466 D ++S + VL+L +A+D+F K GR P Q + K+ + + + Sbjct: 410 DEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYG 469 Query: 467 LDT-IDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 L + + +F A + +AA GG QEV+K Sbjct: 470 LSVMVKDDYVHEFCRYGAAEPHTIAAFLGGAAAQEVIK 507
>ULE1A_HUMAN (Q9UBE0) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 346 Score = 38.5 bits (88), Expect = 0.014 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 7/181 (3%) Frame = +2 Query: 59 LEFQDGDLVVFSEVHGMTELNDGK----PRKVKNARPFSFSIEEDTSNFGTYVKGGIVTQ 226 ++F GD+ + HG T N G+ K K A+ S +E+ + T Sbjct: 151 IKFFTGDVFGY---HGYTFANLGEHEFVEEKTKVAK-VSQGVEDGPDTKRAKLDSSETTM 206 Query: 227 VKEPKVLCFKALRDAMTDPGDFLLSDFSK--FERPPVLHLAFQALDKFKKDHGRCPAAGC 400 VK+ V C +++A+ S+ +K +R + Q L KF+ D GR P++ Sbjct: 207 VKKKVVFC--PVKEALEVDWS---SEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDT 261 Query: 401 -EQDAQSFLKIAAAINETSADRKLDTIDEKLFQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 E+D++ L+I + ++ L + L + F + + P+ A+ GGI+ QE+VK Sbjct: 262 YEEDSELLLQIRNDVLDS-----LGISPDLLPEDFVRYCFSEMAPVCAVVGGILAQEIVK 316 Query: 578 A 580 A Sbjct: 317 A 317
>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 36.6 bits (83), Expect = 0.054 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%) Frame = +2 Query: 329 VLHLAFQALDKFKKDHGRCPAAGCEQDAQSFLKIAAAINETSADRKLD-TIDEKLFQQFA 505 VL+L +++D+F + H R P Q + K+ +N + L+ + + +F Sbjct: 423 VLYLMLRSVDRFYQQHSRYPGVYNYQVEEDINKLKLCVNSLLQEYSLNVNVKDDYIHEFC 482 Query: 506 SGSRAVLNPMAAMFGGIVGQEVVK 577 A + +AA GG QE +K Sbjct: 483 RYGAAEPHTVAAFLGGSAAQEAIK 506
>ULE1A_MOUSE (Q9R1T2) Ubiquitin-like 1-activating enzyme E1A (SUMO-1-activating| enzyme subunit 1) Length = 350 Score = 35.4 bits (80), Expect = 0.12 Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 1/83 (1%) Frame = +2 Query: 335 HLAFQALDKFKKDHGRCPAA-GCEQDAQSFLKIAAAINETSADRKLDTIDEKLFQQFASG 511 + Q L KF+ D GR P + ++DA+ L+I + ++ L + L F Sbjct: 244 YFLLQVLLKFRTDKGRDPTSESYKEDAELLLQIRNDVFDS-----LGISPDLLPDDFVRY 298 Query: 512 SRAVLNPMAAMFGGIVGQEVVKA 580 + + P+ A+ GGI+ QE+VKA Sbjct: 299 CFSEMAPVCAVVGGILAQEIVKA 321
>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system| defective) (Homeobox protein NK-2) Length = 723 Score = 32.0 bits (71), Expect = 1.3 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = -3 Query: 125 HHSVLSYHGPQRKQQDHHLGTQAVHHQHRISVQGYH 18 HHS +H P Q H Q HH H + Q +H Sbjct: 281 HHSTTEHHAPPSHPQQQHPHHQQHHHPHLLLPQQHH 316
>WNT5A_RAT (Q9QXQ7) Protein Wnt-5a precursor| Length = 379 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 205 KRWNCHTGERTK--GAMFQGTKRCHDRSWRFSSE*LLKV*APPCASPGISSSGQI*ERPW 378 +RWNC T + T G + Q R ++ S+ ++ + C +S+ G RP Sbjct: 111 RRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELSTCGCSRARPK 170 Query: 379 TLPCCWL*AGC 411 LP WL GC Sbjct: 171 DLPRDWLWGGC 181
>WNT5A_MOUSE (P22725) Protein Wnt-5a precursor| Length = 379 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 205 KRWNCHTGERTK--GAMFQGTKRCHDRSWRFSSE*LLKV*APPCASPGISSSGQI*ERPW 378 +RWNC T + T G + Q R ++ S+ ++ + C +S+ G RP Sbjct: 111 RRWNCSTVDNTSVFGRVMQIGSRETAFTYAVSAAGVVNAMSRACREGELSTCGCSRARPK 170 Query: 379 TLPCCWL*AGC 411 LP WL GC Sbjct: 171 DLPRDWLWGGC 181
>E75BC_DROME (P17671) Ecdysone-induced protein 75B isoforms C/D (E75-A)| Length = 1199 Score = 30.0 bits (66), Expect = 5.0 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -3 Query: 125 HHSVLSYHGPQRKQQDHHLGTQAVHHQHRISVQGY 21 HH H PQ++QQ HHL Q H H + GY Sbjct: 156 HHHPQQEHQPQQQQQQHHL--QHHPHPHVMYPHGY 188
>ARGD_LISMF (Q71Z79) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 386 Score = 30.0 bits (66), Expect = 5.0 Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 2/122 (1%) Frame = -2 Query: 552 PPNIAAIGFKTAREPLANCWNSFSSIVSSLRSAEVSLIAAAIFRKL*ASCSQPAAGQRPW 373 P N+A + ++ L N W++ + +L+ + LIA R + S A + Sbjct: 47 PANVA----EAVQQQLTNIWHTSNLYECALQDSVAELIADGKDRLVFFCNSGTEANEAAL 102 Query: 372 SFLNLSRA*NAR*STGGRS--NFEKSLRRKSPGSVMASLSALKHSTFGSFTCVTIPPFT* 199 AR TG FEKS ++ GS+ A+ A H FG +P FT Sbjct: 103 KL--------ARKYTGKEKIITFEKSFHGRTFGSMSATAQAKIHQGFGGL----VPGFTY 150 Query: 198 VP 193 VP Sbjct: 151 VP 152
>CUDA_DICDI (O00841) Putative transcriptional regulator cudA| Length = 791 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -3 Query: 437 QQQSSENFEHPAHNQQQGSVHGLS*ICPELEMPGEAQGG--AQTLRSHSEENLQDLSWHL 264 QQQ+ + + P QQQG + + I P+L+M AQ QT+ ++ +HL Sbjct: 639 QQQNQQQGQQPQQQQQQGQLDYTTYIDPQLQMQQAAQQQYMQQTMDQQQQQQYYMQQYHL 698
>ULA1_CAEEL (Q18217) NEDD8-activating enzyme E1 regulatory subunit| (Ubiquitin-like activation protein 1) Length = 541 Score = 29.3 bits (64), Expect = 8.6 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 9/89 (10%) Frame = +2 Query: 338 LAFQALDKFKKDHGRCPAAG---CEQDAQSFLK-IAAAINETSADRKLDT-----IDEKL 490 L +A+ +F+K+ GR P DAQ K + I E D + T + + Sbjct: 426 LLMRAVGRFQKEKGRYPGTNGVPVSIDAQDLKKRVEVLIREALKDEQDFTSISNKVTDTA 485 Query: 491 FQQFASGSRAVLNPMAAMFGGIVGQEVVK 577 + A L+ +++ GGI QE++K Sbjct: 486 IAEICRFGAAELHVISSYVGGIAAQEIIK 514 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,728,135 Number of Sequences: 219361 Number of extensions: 1628685 Number of successful extensions: 4497 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4256 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4460 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
