Clone Information

BLAST Search Result

Clone Name	bah62m21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|BT009037.1\| Triticum aestivum clone wdk5c.pk0001.d10:fis, ful...	763	0.0
2	ref\|XM_550320.1\| Oryza sativa (japonica cultivar-group), mRNA	585	e-164
3	dbj\|AK103230.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	577	e-161
4	gb\|AY105079.1\| Zea mays PCO107820 mRNA sequence	394	e-106
5	gb\|BT019035.1\| Zea mays clone Contig552.F mRNA sequence	379	e-102
6	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	182	1e-42
7	dbj\|AP002523.1\| Oryza sativa (japonica cultivar-group) genomic D...	182	1e-42
8	gb\|AC130811.22\| Medicago truncatula clone mth2-26b4, complete se...	66	2e-07
9	ref\|NM_112954.2\| Arabidopsis thaliana UBP14 (UBIQUITIN-SPECIFIC ...	60	1e-05
10	gb\|BT011829.1\| Arabidopsis thaliana At3g20625 mRNA sequence	60	1e-05
11	gb\|AY140096.1\| Arabidopsis thaliana ubiquitin-specific protease ...	60	1e-05
12	gb\|AF302664.1\|AF302664 Arabidopsis thaliana ubiquitin-specific p...	60	1e-05
13	emb\|BX322639.2\| Human DNA sequence from clone RP11-313J2 on chro...	46	0.14
14	gb\|AC102841.7\| Mus musculus chromosome 7, clone RP24-371C6, comp...	42	2.3
15	ref\|XM_419173.1\| PREDICTED: Gallus gallus similar to CHST9 (LOC4...	42	2.3
16	gb\|AC156987.7\| Mus musculus chromosome 7, clone RP23-78K13, comp...	42	2.3
17	gb\|AC125397.5\| Mus musculus BAC clone RP24-206J16 from chromosom...	42	2.3
18	emb\|AL590623.16\| Human DNA sequence from clone RP11-96F8 on chro...	42	2.3
19	gb\|AC020760.6\| Homo sapiens chromosome 16 clone RP11-151C19, com...	42	2.3
20	emb\|AL928796.9\| Mouse DNA sequence from clone RP23-150I5 on chro...	42	2.3
21	emb\|AL591207.15\| Mouse DNA sequence from clone RP23-392O3 on chr...	42	2.3
22	ref\|NM_105544.2\| Arabidopsis thaliana hydrolase/ zinc ion bindin...	40	8.9
23	gb\|AY365127.2\| Haemonchus contortus glutamate-gated chloride cha...	40	8.9
24	gb\|AC134572.4\| Mus musculus BAC clone RP23-435M15 from chromosom...	40	8.9
25	gb\|AC104200.12\| Mus musculus chromosome 13, clone RP24-512M2, co...	40	8.9
26	gb\|AC128673.4\| Homo sapiens BAC clone RP11-1195P3 from UL, compl...	40	8.9
27	emb\|AL118502.38\|HSA371L19 Human DNA sequence from clone RP11-371...	40	8.9
28	gb\|AC147881.2\| Xenopus tropicalis clone CH216-115N11, complete s...	40	8.9
29	emb\|AL646001.7\| Mouse DNA sequence from clone RP23-10B17 on chro...	40	8.9
30	emb\|CR354432.6\| Zebrafish DNA sequence from clone CH211-66E2 in ...	40	8.9
31	gb\|AC022145.8\| Homo sapiens chromosome 19 clone CTD-2579N5, comp...	40	8.9
32	emb\|BX119901.9\| Zebrafish DNA sequence from clone CH211-194D7 in...	40	8.9
33	gb\|AC106730.2\| Homo sapiens chromosome 16 clone CTD-2014E2, comp...	40	8.9
34	gb\|AC096674.3\| Homo sapiens chromosome 1 clone RP11-59A2, comple...	40	8.9
35	gb\|AC159480.5\| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cance...	40	8.9
36	emb\|BX784031.5\| Zebrafish DNA sequence from clone DKEY-174E15 in...	40	8.9
37	gb\|AC011502.7\| Homo sapiens chromosome 19 clone CTB-87J17, compl...	40	8.9
38	gb\|AC011914.9\|AC011914 Arabidopsis thaliana chromosome 1 BAC F14...	40	8.9
39	gb\|AC133084.4\| Mus musculus BAC clone RP24-358F13 from chromosom...	40	8.9
40	emb\|BX005470.6\| Zebrafish DNA sequence from clone CH211-122K23 i...	40	8.9
41	gb\|AC008075.2\|F24J5 Arabidopsis thaliana chromosome 1 BAC F24J5 ...	40	8.9
42	emb\|AL139353.3\|CNS01DXJ Human chromosome 14 DNA sequence BAC R-1...	40	8.9
43	gb\|AC102370.13\| Mus musculus chromosome 3, clone RP23-256D7, com...	40	8.9
44	emb\|BX294666.6\| Zebrafish DNA sequence from clone CH211-251M11 i...	40	8.9
45	gb\|AC154329.3\| Mus musculus BAC clone RP23-266K11 from chromosom...	40	8.9
46	emb\|AL772264.8\| Mouse DNA sequence from clone RP23-15I21 on chro...	40	8.9

>gb|BT009037.1| Triticum aestivum clone wdk5c.pk0001.d10:fis, full insert mRNA
           sequence
          Length = 1200

 Score =  763 bits (385), Expect = 0.0
 Identities = 409/417 (98%)
 Strand = Plus / Plus

                                                                       
Query: 238 ctggaggcatgcttagcaagtttttcaggcggagaggaagtgcctgagttttacagcact 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctggaggcatgcttagcaagtttttcaggcggagaggaagtgcctgagttttacagcact 60

                                                                       
Query: 298 gcattaaattcaaagacgacagcaattaagactactggccttaaaacttttcctgattac 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcattaaattcaaagacgacagcaattaagactactggccttaaaacttttcctgattac 120

                                                                       
Query: 358 ctggtgcttcagatgcgtaagtttgtgatgggagcaggatgggtgccaaagaaacttgat 417
           |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 121 ctggtgcttcagatgcgtaagtttgtaatgggagaaggatgggtgccaaagaaacttgat 180

                                                                       
Query: 418 gtttatattgatgtgccggatataatcgatatctcgcacatgcgcagccatggtgtacag 477
           ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 181 gtttatattgacgtgccggatataatcgatatctcgcacatgcgcagcaatggtgtacag 240

                                                                       
Query: 478 cctggggaagagctactgcccgaaggagcttcttgtggcaacaaagcggaatctgctcgt 537
           |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||
Sbjct: 241 cctggggaagagctactgcctgaaggagcttcttgtggcaacaaagctgaacctgctcgt 300

                                                                       
Query: 538 cctgttgccgacgaggatattgtatcccagcttgcaaacatggggttcaattactttgcc 597
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 301 cctgttgccgacgaggatattgtatcccagcttgcaaacatcgggttcaattactttgcc 360

                                                                    
Query: 598 tgtcagaaagctgctattaatacatcaaatgcaggacttgaggaggcaatgaattgg 654
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtcagaaagctgctattaatacatcaaatgcaggacttgaggaggcaatgaattgg 417

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>ref|XM_550320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2910

 Score =  585 bits (295), Expect = e-164
 Identities = 553/639 (86%)
 Strand = Plus / Plus

                                                                        
Query: 16   aatccttgtactggcttcaagttcatcattgaggagcgggttcagtgtccctctgggaaa 75
            ||||||| ||| || ||||| ||| |||||||||||||  |||| || || ||||| |||
Sbjct: 1422 aatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaa 1481

                                                                        
Query: 76   gtttcttacaatcaacattgtgacaactttcttactttgagcataccattgcatgaagcg 135
            || || || ||  ||| || |||| || ||||| |||||| |||||| || |||||||| 
Sbjct: 1482 gtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagct 1541

                                                                        
Query: 136  actaacaaagagcagctagaagtgttccatgagaagaaagcagcaatggacttggatgga 195
            ||||||||||||||||||||||  || |||||||||||||| |||||||| |||||||||
Sbjct: 1542 actaacaaagagcagctagaagcatttcatgagaagaaagctgcaatggatttggatgga 1601

                                                                        
Query: 196  aaggaattgtctaaggaggaaatcgtgaggccaagagtcccactggaggcatgcttagca 255
            |||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1602 aaggaagtgtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagca 1661

                                                                        
Query: 256  agtttttcaggcggagaggaagtgcctgagttttacagcactgcattaaattcaaagacg 315
            |||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||| 
Sbjct: 1662 agtttttcaggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagaca 1721

                                                                        
Query: 316  acagcaattaagactactggccttaaaacttttcctgattacctggtgcttcagatgcgt 375
            ||||||||||||||| ||||| ||||||| |||||||||||||||||| | |||||||| 
Sbjct: 1722 acagcaattaagactgctggctttaaaacatttcctgattacctggtgttgcagatgcgc 1781

                                                                        
Query: 376  aagtttgtgatgggagcaggatgggtgccaaagaaacttgatgtttatattgatgtgccg 435
            |||||||| |||| |||||||||||||||||||||||| ||||| ||  | |||||||| 
Sbjct: 1782 aagtttgtaatggaagcaggatgggtgccaaagaaactagatgtatacgtagatgtgcca 1841

                                                                        
Query: 436  gatataatcgatatctcgcacatgcgcagccatggtgtacagcctggggaagagctactg 495
            |||||||| ||||||||||||||||||||| | ||  |||||||||| ||||||||||| 
Sbjct: 1842 gatataattgatatctcgcacatgcgcagcaaaggcatacagcctggtgaagagctacta 1901

                                                                        
Query: 496  cccgaaggagcttcttgtggcaacaaagcggaatctgctcgtcctgttgccgacgaggat 555
            || |||||||||||| |||  |||||||| ||| ||| || ||||||||||   ||||| 
Sbjct: 1902 cctgaaggagcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggac 1961

                                                                        
Query: 556  attgtatcccagcttgcaaacatggggttcaattactttgcctgtcagaaagctgctatt 615
            |||||||| ||||| |||| |||||||||||||||  ||   || |||||||||||||||
Sbjct: 1962 attgtatctcagctggcaagcatggggttcaattatcttcattgccagaaagctgctatt 2021

                                                   
Query: 616  aatacatcaaatgcaggacttgaggaggcaatgaattgg 654
            | |||||||||  ||||| |||||||||| |||||||||
Sbjct: 2022 agtacatcaaacacaggagttgaggaggcgatgaattgg 2060

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>dbj|AK103230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123D13, full
            insert sequence
          Length = 2910

 Score =  577 bits (291), Expect = e-161
 Identities = 552/639 (86%)
 Strand = Plus / Plus

                                                                        
Query: 16   aatccttgtactggcttcaagttcatcattgaggagcgggttcagtgtccctctgggaaa 75
            ||||||| ||| || ||||| ||| |||||||||||||  |||| || || ||||| |||
Sbjct: 1422 aatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaa 1481

                                                                        
Query: 76   gtttcttacaatcaacattgtgacaactttcttactttgagcataccattgcatgaagcg 135
            || || || ||  ||| || |||| || ||||| |||||| |||||| || |||||||| 
Sbjct: 1482 gtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagct 1541

                                                                        
Query: 136  actaacaaagagcagctagaagtgttccatgagaagaaagcagcaatggacttggatgga 195
            ||||||||||||||||||||||  || |||||||||||||| |||||||| |||||||||
Sbjct: 1542 actaacaaagagcagctagaagcatttcatgagaagaaagctgcaatggatttggatgga 1601

                                                                        
Query: 196  aaggaattgtctaaggaggaaatcgtgaggccaagagtcccactggaggcatgcttagca 255
            |||||| ||||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1602 aaggaagtgtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagca 1661

                                                                        
Query: 256  agtttttcaggcggagaggaagtgcctgagttttacagcactgcattaaattcaaagacg 315
            |||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||| 
Sbjct: 1662 agtttttcaggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagaca 1721

                                                                        
Query: 316  acagcaattaagactactggccttaaaacttttcctgattacctggtgcttcagatgcgt 375
            ||||||||||||||| ||||| ||||||| |||||||||||||||||| | |||||||| 
Sbjct: 1722 acagcaattaagactgctggctttaaaacatttcctgattacctggtgttgcagatgcgc 1781

                                                                        
Query: 376  aagtttgtgatgggagcaggatgggtgccaaagaaacttgatgtttatattgatgtgccg 435
            |||||||| |||| |||||||||||||||||||||||| ||||| ||  | |||||||| 
Sbjct: 1782 aagtttgtaatggaagcaggatgggtgccaaagaaactagatgtatacgtagatgtgcca 1841

                                                                        
Query: 436  gatataatcgatatctcgcacatgcgcagccatggtgtacagcctggggaagagctactg 495
            |||||||| ||||||||||||||||||||| | ||  |||||||||| ||||||||||| 
Sbjct: 1842 gatataattgatatctcgcacatgcgcagcgaaggcatacagcctggtgaagagctacta 1901

                                                                        
Query: 496  cccgaaggagcttcttgtggcaacaaagcggaatctgctcgtcctgttgccgacgaggat 555
            || |||||||||||| |||  |||||||| ||| ||| || ||||||||||   ||||| 
Sbjct: 1902 cctgaaggagcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggac 1961

                                                                        
Query: 556  attgtatcccagcttgcaaacatggggttcaattactttgcctgtcagaaagctgctatt 615
            |||||||| ||||| |||| |||||||||||||||  ||   || |||||||||||||||
Sbjct: 1962 attgtatctcagctggcaagcatggggttcaattatcttcattgccagaaagctgctatt 2021

                                                   
Query: 616  aatacatcaaatgcaggacttgaggaggcaatgaattgg 654
            | |||||||||  ||||| |||||||||| |||| ||||
Sbjct: 2022 agtacatcaaacacaggagttgaggaggcgatgagttgg 2060

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>gb|AY105079.1| Zea mays PCO107820 mRNA sequence
          Length = 2648

 Score =  394 bits (199), Expect = e-106
 Identities = 508/611 (83%)
 Strand = Plus / Plus

                                                                        
Query: 44   ttgaggagcgggttcagtgtccctctgggaaagtttcttacaatcaacattgtgacaact 103
            |||| ||| |||||||||| || |||||||| |||||||||||  |||  | ||||||| 
Sbjct: 1376 ttgaagagagggttcagtgcccttctgggaaggtttcttacaacaaacgatctgacaacg 1435

                                                                        
Query: 104  ttcttactttgagcataccattgcatgaagcgactaacaaagagcagctagaagtgttcc 163
            ||||| |||||||||||||| ||||||| || ||||| ||||||||||||||||  ||  
Sbjct: 1436 ttctttctttgagcataccactgcatgaggcaactaataaagagcagctagaagctttta 1495

                                                                        
Query: 164  atgagaagaaagcagcaatggacttggatggaaaggaattgtctaaggaggaaatcgtga 223
            ||||||||||||| |||||| ||||||||||||| ||| ||||||| ||||| || || |
Sbjct: 1496 atgagaagaaagctgcaatgaacttggatggaaaagaagtgtctaatgaggatattgtca 1555

                                                                        
Query: 224  ggccaagagtcccactggaggcatgcttagcaagtttttcaggcggagaggaagtgcctg 283
            |||| ||||||||| |||||||||||||  |||||||||||||   ||||||  | || |
Sbjct: 1556 ggcctagagtcccattggaggcatgcttgtcaagtttttcagggccagaggagattccag 1615

                                                                        
Query: 284  agttttacagcactgcattaaattcaaagacgacagcaattaagactactggccttaaaa 343
            | ||||| ||||||||||||||||||||||| || |  | ||||||  ||||  | |  |
Sbjct: 1616 atttttatagcactgcattaaattcaaagactaccgtcactaagacagctggtttcacta 1675

                                                                        
Query: 344  cttttcctgattacctggtgcttcagatgcgtaagtttgtgatgggagcaggatgggtgc 403
            | |||||||||||||| ||||| || |||||||||||||| |||| | ||||||||||||
Sbjct: 1676 cctttcctgattaccttgtgctgcacatgcgtaagtttgtaatggaaacaggatgggtgc 1735

                                                                        
Query: 404  caaagaaacttgatgtttatattgatgtgccggatataatcgatatctcgcacatgcgca 463
            |||||||||| ||||||||||| |||||||| |||| ||| |||||| | || |||||||
Sbjct: 1736 caaagaaactcgatgtttatatagatgtgccagatacaattgatatcacacatatgcgca 1795

                                                                        
Query: 464  gccatggtgtacagcctggggaagagctactgcccgaaggagcttcttgtggcaacaaag 523
            || | ||  ||||||||||||||||||| || || ||||||| |||| ||| | |||  |
Sbjct: 1796 gcaaaggattacagcctggggaagagctgctacctgaaggaggttctggtgacgacagtg 1855

                                                                        
Query: 524  cggaatctgctcgtcctgttgccgacgaggatattgtatcccagcttgcaaacatggggt 583
            | ||  |||||  ||||||||||   |||||||||||| |||||||||||| |||||| |
Sbjct: 1856 ccgagcctgctaatcctgttgccagtgaggatattgtaacccagcttgcaagcatgggct 1915

                                                                        
Query: 584  tcaattactttgcctgtcagaaagctgctattaatacatcaaatgcaggacttgaggagg 643
            |||| ||| ||   |||||||||||||||||||| ||||||||  ||||| ||||||| |
Sbjct: 1916 tcaactaccttcattgtcagaaagctgctattaacacatcaaacacaggagttgaggaag 1975

                       
Query: 644  caatgaattgg 654
            | |||||||||
Sbjct: 1976 cgatgaattgg 1986

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>gb|BT019035.1| Zea mays clone Contig552.F mRNA sequence
          Length = 1262

 Score =  379 bits (191), Expect = e-102
 Identities = 467/559 (83%)
 Strand = Plus / Plus

                                                                       
Query: 96  tgacaactttcttactttgagcataccattgcatgaagcgactaacaaagagcagctaga 155
           ||||||| ||||| |||||||||||||| ||||||| || ||||| ||||||||||||||
Sbjct: 25  tgacaacgttctttctttgagcataccactgcatgaggcaactaataaagagcagctaga 84

                                                                       
Query: 156 agtgttccatgagaagaaagcagcaatggacttggatggaaaggaattgtctaaggagga 215
           ||  ||  ||||||||||||| |||||| ||||||||||||| ||| ||||||| |||||
Sbjct: 85  agcttttaatgagaagaaagctgcaatgaacttggatggaaaagaagtgtctaatgagga 144

                                                                       
Query: 216 aatcgtgaggccaagagtcccactggaggcatgcttagcaagtttttcaggcggagagga 275
            || || ||||| ||||||||| ||||||||||||| ||||||||||||||   ||||||
Sbjct: 145 tattgtcaggcctagagtcccattggaggcatgcttggcaagtttttcagggccagagga 204

                                                                       
Query: 276 agtgcctgagttttacagcactgcattaaattcaaagacgacagcaattaagactactgg 335
             | || || ||||| ||||||||||||||||||||||| || |  | ||||||  ||||
Sbjct: 205 gattccagatttttatagcactgcattaaattcaaagactaccgtcactaagacagctgg 264

                                                                       
Query: 336 ccttaaaacttttcctgattacctggtgcttcagatgcgtaagtttgtgatgggagcagg 395
             | |  || |||||||||||||| ||||| || |||||||||||||| |||| | ||||
Sbjct: 265 tttcactacctttcctgattaccttgtgctgcacatgcgtaagtttgtaatggaaacagg 324

                                                                       
Query: 396 atgggtgccaaagaaacttgatgtttatattgatgtgccggatataatcgatatctcgca 455
           |||||||||||||||||| ||||||||||| |||||||| |||| ||| |||||| | ||
Sbjct: 325 atgggtgccaaagaaactcgatgtttatatagatgtgccagatacaattgatatcacaca 384

                                                                       
Query: 456 catgcgcagccatggtgtacagcctggggaagagctactgcccgaaggagcttcttgtgg 515
            ||||||||| | ||  ||||||||||||||||||| || || ||||||| |||| ||| 
Sbjct: 385 tatgcgcagcaaaggattacagcctggggaagagctgctacctgaaggaggttctggtga 444

                                                                       
Query: 516 caacaaagcggaatctgctcgtcctgttgccgacgaggatattgtatcccagcttgcaaa 575
           | |||  || ||  |||||  ||||||||||   |||||||||||| |||||||||||| 
Sbjct: 445 cgacagtgccgagcctgctaatcctgttgccagtgaggatattgtaacccagcttgcaag 504

                                                                       
Query: 576 catggggttcaattactttgcctgtcagaaagctgctattaatacatcaaatgcaggact 635
           |||||| ||||| ||| ||   |||||||||||||||||||| ||||||||  ||||| |
Sbjct: 505 catgggcttcaactaccttcattgtcagaaagctgctattaacacatcaaacacaggagt 564

                              
Query: 636 tgaggaggcaatgaattgg 654
           |||||| || |||||||||
Sbjct: 565 tgaggaagcgatgaattgg 583

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  182 bits (92), Expect = 1e-42
 Identities = 116/124 (93%)
 Strand = Plus / Plus

                                                                           
Query: 204     gtctaaggaggaaatcgtgaggccaagagtcccactggaggcatgcttagcaagtttttc 263
               |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3990770 gtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagcaagtttttc 3990829

                                                                           
Query: 264     aggcggagaggaagtgcctgagttttacagcactgcattaaattcaaagacgacagcaat 323
               |||||  |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 3990830 aggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagacaacagcaat 3990889

                   
Query: 324     taag 327
               ||||
Sbjct: 3990890 taag 3990893



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                           
Query: 327     gactactggccttaaaacttttcctgattacctggtgcttcagatgcgtaagtttgtgat 386
               |||| ||||| ||||||| |||||||||||||||||| | |||||||| |||||||| ||
Sbjct: 3991440 gactgctggctttaaaacatttcctgattacctggtgttgcagatgcgcaagtttgtaat 3991499

                                          
Query: 387     gggagcaggatgggtgccaaagaaact 413
               || ||||||||||||||||||||||||
Sbjct: 3991500 ggaagcaggatgggtgccaaagaaact 3991526



 Score =  101 bits (51), Expect = 3e-18
 Identities = 126/151 (83%)
 Strand = Plus / Plus

                                                                           
Query: 504     agcttcttgtggcaacaaagcggaatctgctcgtcctgttgccgacgaggatattgtatc 563
               ||||||| |||  |||||||| ||| ||| || ||||||||||   ||||| ||||||||
Sbjct: 3992617 agcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggacattgtatc 3992676

                                                                           
Query: 564     ccagcttgcaaacatggggttcaattactttgcctgtcagaaagctgctattaatacatc 623
                ||||| |||| |||||||||||||||  ||   || |||||||||||||||| ||||||
Sbjct: 3992677 tcagctggcaagcatggggttcaattatcttcattgccagaaagctgctattagtacatc 3992736

                                              
Query: 624     aaatgcaggacttgaggaggcaatgaattgg 654
               |||  ||||| |||||||||| |||||||||
Sbjct: 3992737 aaacacaggagttgaggaggcgatgaattgg 3992767



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                           
Query: 427     gatgtgccggatataatcgatatctcgcacatgcgcagccatggtgtacagcctggggaa 486
               |||||||| |||||||| ||||||||||||||||||||| | ||  |||||||||| |||
Sbjct: 3992461 gatgtgccagatataattgatatctcgcacatgcgcagcaaaggcatacagcctggtgaa 3992520

                                  
Query: 487     gagctactgcccgaaggag 505
               |||||||| || |||||||
Sbjct: 3992521 gagctactacctgaaggag 3992539



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                         
Query: 144     agagcagctagaagtgttccatgagaagaaagcagcaatggacttggatggaaaggaa 201
               ||||||||||||||  || |||||||||||||| |||||||| |||||||||||||||
Sbjct: 3990640 agagcagctagaagcatttcatgagaagaaagctgcaatggatttggatggaaaggaa 3990697



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 105/130 (80%)
 Strand = Plus / Plus

                                                                           
Query: 16      aatccttgtactggcttcaagttcatcattgaggagcgggttcagtgtccctctgggaaa 75
               ||||||| ||| || ||||| ||| |||||||||||||  |||| || || ||||| |||
Sbjct: 3990438 aatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaa 3990497

                                                                           
Query: 76      gtttcttacaatcaacattgtgacaactttcttactttgagcataccattgcatgaagcg 135
               || || || ||  ||| || |||| || ||||| |||||| |||||| || |||||||| 
Sbjct: 3990498 gtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagct 3990557

                         
Query: 136     actaacaaag 145
               ||||||||||
Sbjct: 3990558 actaacaaag 3990567

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>dbj|AP002523.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0013F10
          Length = 163095

 Score =  182 bits (92), Expect = 1e-42
 Identities = 116/124 (93%)
 Strand = Plus / Plus

                                                                          
Query: 204    gtctaaggaggaaatcgtgaggccaagagtcccactggaggcatgcttagcaagtttttc 263
              |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 112674 gtctaatgaggaaattgtgaggcctagagtcccactggaggcatgcttagcaagtttttc 112733

                                                                          
Query: 264    aggcggagaggaagtgcctgagttttacagcactgcattaaattcaaagacgacagcaat 323
              |||||  |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 112734 aggcgcggaggaagtgcctgaattttacagcactgcattgaattcaaagacaacagcaat 112793

                  
Query: 324    taag 327
              ||||
Sbjct: 112794 taag 112797



 Score =  109 bits (55), Expect = 1e-20
 Identities = 79/87 (90%)
 Strand = Plus / Plus

                                                                          
Query: 327    gactactggccttaaaacttttcctgattacctggtgcttcagatgcgtaagtttgtgat 386
              |||| ||||| ||||||| |||||||||||||||||| | |||||||| |||||||| ||
Sbjct: 113344 gactgctggctttaaaacatttcctgattacctggtgttgcagatgcgcaagtttgtaat 113403

                                         
Query: 387    gggagcaggatgggtgccaaagaaact 413
              || ||||||||||||||||||||||||
Sbjct: 113404 ggaagcaggatgggtgccaaagaaact 113430



 Score =  101 bits (51), Expect = 3e-18
 Identities = 126/151 (83%)
 Strand = Plus / Plus

                                                                          
Query: 504    agcttcttgtggcaacaaagcggaatctgctcgtcctgttgccgacgaggatattgtatc 563
              ||||||| |||  |||||||| ||| ||| || ||||||||||   ||||| ||||||||
Sbjct: 114521 agcttctggtgataacaaagctgaacctgttcatcctgttgccagtgaggacattgtatc 114580

                                                                          
Query: 564    ccagcttgcaaacatggggttcaattactttgcctgtcagaaagctgctattaatacatc 623
               ||||| |||| |||||||||||||||  ||   || |||||||||||||||| ||||||
Sbjct: 114581 tcagctggcaagcatggggttcaattatcttcattgccagaaagctgctattagtacatc 114640

                                             
Query: 624    aaatgcaggacttgaggaggcaatgaattgg 654
              |||  ||||| |||||||||| |||||||||
Sbjct: 114641 aaacacaggagttgaggaggcgatgaattgg 114671



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                          
Query: 427    gatgtgccggatataatcgatatctcgcacatgcgcagccatggtgtacagcctggggaa 486
              |||||||| |||||||| ||||||||||||||||||||| | ||  |||||||||| |||
Sbjct: 114365 gatgtgccagatataattgatatctcgcacatgcgcagcaaaggcatacagcctggtgaa 114424

                                 
Query: 487    gagctactgcccgaaggag 505
              |||||||| || |||||||
Sbjct: 114425 gagctactacctgaaggag 114443



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                        
Query: 144    agagcagctagaagtgttccatgagaagaaagcagcaatggacttggatggaaaggaa 201
              ||||||||||||||  || |||||||||||||| |||||||| |||||||||||||||
Sbjct: 112544 agagcagctagaagcatttcatgagaagaaagctgcaatggatttggatggaaaggaa 112601



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 105/130 (80%)
 Strand = Plus / Plus

                                                                          
Query: 16     aatccttgtactggcttcaagttcatcattgaggagcgggttcagtgtccctctgggaaa 75
              ||||||| ||| || ||||| ||| |||||||||||||  |||| || || ||||| |||
Sbjct: 112342 aatccttttacagggttcaaattcttcattgaggagcgtcttcaatgcccttctggaaaa 112401

                                                                          
Query: 76     gtttcttacaatcaacattgtgacaactttcttactttgagcataccattgcatgaagcg 135
              || || || ||  ||| || |||| || ||||| |||||| |||||| || |||||||| 
Sbjct: 112402 gtctcctataacaaacgttctgactacattctttctttgaacataccgttacatgaagct 112461

                        
Query: 136    actaacaaag 145
              ||||||||||
Sbjct: 112462 actaacaaag 112471

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>gb|AC130811.22| Medicago truncatula clone mth2-26b4, complete sequence
          Length = 139970

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                      
Query: 598   tgtcagaaagctgctattaatacatcaaatgcaggacttgaggaggcaatgaattgg 654
             ||||| |||||||||||||||||||||||||| ||| | || |||||||||| ||||
Sbjct: 35024 tgtcaaaaagctgctattaatacatcaaatgctggagtagaagaggcaatgacttgg 35080



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 121   ccattgcatgaagcgactaacaaag 145
             |||||||||||||| ||||||||||
Sbjct: 33364 ccattgcatgaagcaactaacaaag 33388

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>ref|NM_112954.2| Arabidopsis thaliana UBP14 (UBIQUITIN-SPECIFIC PROTEASE 14);
            ubiquitin-specific protease AT3G20630 (UBP14) mRNA,
            complete cds
          Length = 2394

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 397  tgggtgccaaagaaacttgatgtttatattgatgtgccggat 438
            ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1696 tgggtgccaaagaaacttgatgtatacattgatgttccggat 1737

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>gb|BT011829.1| Arabidopsis thaliana At3g20625 mRNA sequence
          Length = 1365

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 397 tgggtgccaaagaaacttgatgtttatattgatgtgccggat 438
           ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 664 tgggtgccaaagaaacttgatgtatacattgatgttccggat 705

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>gb|AY140096.1| Arabidopsis thaliana ubiquitin-specific protease 14 (UBP14), putative
            (At3g20625:At3g20630) mRNA, complete cds
          Length = 2664

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 397  tgggtgccaaagaaacttgatgtttatattgatgtgccggat 438
            ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1758 tgggtgccaaagaaacttgatgtatacattgatgttccggat 1799

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>gb|AF302664.1|AF302664 Arabidopsis thaliana ubiquitin-specific protease 14 (UBP14) mRNA,
            complete cds
          Length = 2394

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 397  tgggtgccaaagaaacttgatgtttatattgatgtgccggat 438
            ||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 1696 tgggtgccaaagaaacttgatgtatacattgatgttccggat 1737

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>emb|BX322639.2| Human DNA sequence from clone RP11-313J2 on chromosome 10 Contains a
             zinc finger protein pseudogene and a CpG island, complete
             sequence
          Length = 87299

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 180   aatggacttggatggaaaggaat 202
             |||||||||||||||||||||||
Sbjct: 22524 aatggacttggatggaaaggaat 22502



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 178   gcaatggacttggatggaaaggaat 202
             |||||||||||| ||||||||||||
Sbjct: 22406 gcaatggacttgaatggaaaggaat 22382

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>gb|AC102841.7| Mus musculus chromosome 7, clone RP24-371C6, complete sequence
          Length = 162151

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 83    acaatcaacattgtgacaact 103
             |||||||||||||||||||||
Sbjct: 19613 acaatcaacattgtgacaact 19593

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>ref|XM_419173.1| PREDICTED: Gallus gallus similar to CHST9 (LOC421089), mRNA
          Length = 2256

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 195  aaaggaattgtctaaggagga 215
            |||||||||||||||||||||
Sbjct: 1386 aaaggaattgtctaaggagga 1406

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>gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, complete sequence
          Length = 231140

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    acaatcaacattgtgacaact 103
             |||||||||||||||||||||
Sbjct: 67230 acaatcaacattgtgacaact 67250

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>gb|AC125397.5| Mus musculus BAC clone RP24-206J16 from chromosome 2, complete sequence
          Length = 134401

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 382   gtgatgggagcaggatgggtg 402
             |||||||||||||||||||||
Sbjct: 55461 gtgatgggagcaggatgggtg 55481

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>emb|AL590623.16| Human DNA sequence from clone RP11-96F8 on chromosome 10 Contains a
             N-acetylated alpha-linked acidic dipeptidase 2 (NAALAD2)
             pseudogene, complete sequence
          Length = 81908

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 180   aatggacttggatggaaaggaattg 204
             |||||| ||||||||||||||||||
Sbjct: 27576 aatggaattggatggaaaggaattg 27552

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>gb|AC020760.6| Homo sapiens chromosome 16 clone RP11-151C19, complete sequence
          Length = 188872

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 180  aatggacttggatggaaaggaattg 204
            |||||| ||||||||||||||||||
Sbjct: 5333 aatggaattggatggaaaggaattg 5309

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>emb|AL928796.9| Mouse DNA sequence from clone RP23-150I5 on chromosome 2, complete
              sequence
          Length = 203793

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 382    gtgatgggagcaggatgggtg 402
              |||||||||||||||||||||
Sbjct: 111110 gtgatgggagcaggatgggtg 111090

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>emb|AL591207.15| Mouse DNA sequence from clone RP23-392O3 on chromosome 12, complete
              sequence
          Length = 211056

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 375    taagtttgtgatgggagcaggatgggtgc 403
              ||||| |||||||||||||||||| ||||
Sbjct: 175685 taagtgtgtgatgggagcaggatgagtgc 175713

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>ref|NM_105544.2| Arabidopsis thaliana hydrolase/ zinc ion binding AT1G68720 mRNA,
            complete cds
          Length = 4215

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 499  gaaggagcttcttgtggcaa 518
            ||||||||||||||||||||
Sbjct: 2795 gaaggagcttcttgtggcaa 2776

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>gb|AY365127.2| Haemonchus contortus glutamate-gated chloride channel (GluCl) gene,
            complete cds, alternatively spliced
          Length = 9194

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   gttcatcattgaggagcggg 55
            ||||||||||||||||||||
Sbjct: 4735 gttcatcattgaggagcggg 4716

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>gb|AC134572.4| Mus musculus BAC clone RP23-435M15 from chromosome 3, complete
            sequence
          Length = 202037

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  cagcaattaagactactggc 336
            ||||||||||||||||||||
Sbjct: 5312 cagcaattaagactactggc 5293

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>gb|AC104200.12| Mus musculus chromosome 13, clone RP24-512M2, complete sequence
          Length = 171912

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   ccttaaaacttttcctgatt 355
             ||||||||||||||||||||
Sbjct: 16642 ccttaaaacttttcctgatt 16661

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>gb|AC128673.4| Homo sapiens BAC clone RP11-1195P3 from UL, complete sequence
          Length = 209514

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   cttgatgtttatattgatgt 431
             ||||||||||||||||||||
Sbjct: 12897 cttgatgtttatattgatgt 12916

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>emb|AL118502.38|HSA371L19 Human DNA sequence from clone RP11-371L19 on chromosome 20 Contains the
             C20orf54 gene, the C20orf55 gene, the RPS10L gene for
             ribosomal protein S10-like and five CpG islands, complete
             sequence
          Length = 126259

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 627   tgcaggacttgaggaggcaatgaa 650
             ||||||| ||||||||||||||||
Sbjct: 55695 tgcaggagttgaggaggcaatgaa 55718

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>gb|AC147881.2| Xenopus tropicalis clone CH216-115N11, complete sequence
          Length = 162394

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 163    catgagaagaaagcagcaat 182
              ||||||||||||||||||||
Sbjct: 143726 catgagaagaaagcagcaat 143745

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>emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chromosome 11 Contains the 5'
              end of a variant of the Odz2 gene for odd Oz/ten-m homolog
              2 (Drosophila), complete sequence
          Length = 194171

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 403    ccaaagaaacttgatgttta 422
              ||||||||||||||||||||
Sbjct: 144128 ccaaagaaacttgatgttta 144147

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>emb|CR354432.6| Zebrafish DNA sequence from clone CH211-66E2 in linkage group 3, complete
              sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    aagctgctattaatacatca 624
              ||||||||||||||||||||
Sbjct: 170889 aagctgctattaatacatca 170908

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>gb|AC022145.8| Homo sapiens chromosome 19 clone CTD-2579N5, complete sequence
          Length = 174994

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    cttgatgtttatattgatgt 431
              ||||||||||||||||||||
Sbjct: 168784 cttgatgtttatattgatgt 168803

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>emb|BX119901.9| Zebrafish DNA sequence from clone CH211-194D7 in linkage group 14,
             complete sequence
          Length = 52488

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 292   agcactgcattaaattcaaa 311
             ||||||||||||||||||||
Sbjct: 50429 agcactgcattaaattcaaa 50410

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>gb|AC106730.2| Homo sapiens chromosome 16 clone CTD-2014E2, complete sequence
          Length = 152748

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 605   aagctgctattaatacatca 624
             ||||||||||||||||||||
Sbjct: 11808 aagctgctattaatacatca 11827

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>gb|AC096674.3| Homo sapiens chromosome 1 clone RP11-59A2, complete sequence
          Length = 176747

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 629   caggacttgaggaggcaatg 648
             ||||||||||||||||||||
Sbjct: 27532 caggacttgaggaggcaatg 27551

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>gb|AC159480.5| Mus musculus 6 BAC RP24-470K4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 168310

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 239    tggaggcatgcttagcaagtttttcagg 266
              ||||| ||||||||||||| ||||||||
Sbjct: 116088 tggagtcatgcttagcaagcttttcagg 116115

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>emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in linkage group 21,
              complete sequence
          Length = 231014

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 292    agcactgcattaaattcaaa 311
              ||||||||||||||||||||
Sbjct: 223000 agcactgcattaaattcaaa 223019

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>gb|AC011502.7| Homo sapiens chromosome 19 clone CTB-87J17, complete sequence
          Length = 38882

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 412  cttgatgtttatattgatgt 431
            ||||||||||||||||||||
Sbjct: 8426 cttgatgtttatattgatgt 8445

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>gb|AC011914.9|AC011914 Arabidopsis thaliana chromosome 1 BAC F14K14 genomic sequence, complete
             sequence
          Length = 96808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   gaaggagcttcttgtggcaa 518
             ||||||||||||||||||||
Sbjct: 90276 gaaggagcttcttgtggcaa 90295

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>gb|AC133084.4| Mus musculus BAC clone RP24-358F13 from chromosome 5, complete sequence
          Length = 177485

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   actggaggcatgcttagcaa 256
             ||||||||||||||||||||
Sbjct: 69633 actggaggcatgcttagcaa 69652

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>emb|BX005470.6| Zebrafish DNA sequence from clone CH211-122K23 in linkage group 18,
              complete sequence
          Length = 172552

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 604    aaagctgctattaatacatcaaat 627
              |||||||| |||||||||||||||
Sbjct: 121707 aaagctgcaattaatacatcaaat 121684

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>gb|AC008075.2|F24J5 Arabidopsis thaliana chromosome 1 BAC F24J5 sequence, complete sequence
          Length = 98942

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 499   gaaggagcttcttgtggcaa 518
             ||||||||||||||||||||
Sbjct: 22012 gaaggagcttcttgtggcaa 22031

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>emb|AL139353.3|CNS01DXJ Human chromosome 14 DNA sequence BAC R-176H8 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 170919

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    ccatgagaagaaagcagcaa 181
              ||||||||||||||||||||
Sbjct: 138747 ccatgagaagaaagcagcaa 138728

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>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence
          Length = 191171

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 317    cagcaattaagactactggc 336
              ||||||||||||||||||||
Sbjct: 137945 cagcaattaagactactggc 137926

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>emb|BX294666.6| Zebrafish DNA sequence from clone CH211-251M11 in linkage group 10,
              complete sequence
          Length = 184574

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 285    gttttacagcactgcattaaattc 308
              |||||| |||||||||||||||||
Sbjct: 176979 gttttaaagcactgcattaaattc 176956

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>gb|AC154329.3| Mus musculus BAC clone RP23-266K11 from chromosome 13, complete
            sequence
          Length = 188096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 336  ccttaaaacttttcctgatt 355
            ||||||||||||||||||||
Sbjct: 8884 ccttaaaacttttcctgatt 8865

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>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
             sequence
          Length = 189540

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   cagcaattaagactactggc 336
             ||||||||||||||||||||
Sbjct: 66773 cagcaattaagactactggc 66792


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,951,527
Number of Sequences: 3902068
Number of extensions: 5951527
Number of successful extensions: 108900
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108730
Number of HSP's gapped (non-prelim): 162
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result