ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62m20 |
|---|---|
| Clone Library Name | barley_pub |
>PSAL_HORVU (P23993) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 209 Score = 171 bits (434), Expect = 3e-43 Identities = 84/84 (100%), Positives = 84/84 (100%) Frame = +2 Query: 113 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 292 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF Sbjct: 1 MATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPF 60 Query: 293 IGSLETPVTSSPLVAWYLSNLPAY 364 IGSLETPVTSSPLVAWYLSNLPAY Sbjct: 61 IGSLETPVTSSPLVAWYLSNLPAY 84
>PSAL_SPIOL (Q41385) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 216 Score = 104 bits (259), Expect = 6e-23 Identities = 55/90 (61%), Positives = 66/90 (73%), Gaps = 9/90 (10%) Frame = +2 Query: 122 AYAPPMASQVMKSGL---ACSKPRGMSGASLT------RRPRFVVKAVKSDKPTYQVVQP 274 A PMASQ +KSG A P+G+SG +L R F V+A+K++KPTYQV+QP Sbjct: 3 ATTSPMASQ-LKSGFTTKALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQP 61 Query: 275 INGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 +NGDPFIG LETPVTSSPL+AWYLSNLPAY Sbjct: 62 LNGDPFIGGLETPVTSSPLIAWYLSNLPAY 91
>PSAL_ARATH (Q9SUI4) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 219 Score = 103 bits (256), Expect = 1e-22 Identities = 59/92 (64%), Positives = 67/92 (72%), Gaps = 11/92 (11%) Frame = +2 Query: 122 AYAPPMASQVMKSGLACSK------PRGMSGA----SLTRR-PRFVVKAVKSDKPTYQVV 268 A A PMASQ+ S + S P+G+SGA S T+R F V+AVKSDK T+QVV Sbjct: 3 ASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVV 62 Query: 269 QPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 QPINGDPFIGSLETPVTSSPL+AWYLSNLP Y Sbjct: 63 QPINGDPFIGSLETPVTSSPLIAWYLSNLPGY 94
>PSAL_CUCSA (Q39654) Photosystem I reaction center subunit XI, chloroplast| precursor (PSI-L) (PSI subunit V) Length = 217 Score = 102 bits (255), Expect = 2e-22 Identities = 54/93 (58%), Positives = 69/93 (74%), Gaps = 9/93 (9%) Frame = +2 Query: 113 MATAYAPPMASQVMKSGLACS-----KPRGMSGASLTRRPR----FVVKAVKSDKPTYQV 265 MATA +P ASQ+ S + + P+G+S + L R P F ++A+++DKPT+QV Sbjct: 1 MATATSPT-ASQLSSSFASSNTRALISPKGLSASPLRRIPTRTHSFTIRAIQADKPTFQV 59 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 +QPINGDPFIGSLETPVTSSPL+AWYLSNLPAY Sbjct: 60 IQPINGDPFIGSLETPVTSSPLIAWYLSNLPAY 92
>PSAL_MASLA (O31126) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 173 Score = 52.4 bits (124), Expect = 3e-07 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +2 Query: 242 SDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 SD +VV P DP IG LETP+ SSPLV W++ NLPAY Sbjct: 13 SDPRNREVVFPAYRDPQIGDLETPINSSPLVKWFIGNLPAY 53
>PSAL_ANAVT (P31092) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/45 (53%), Positives = 31/45 (68%) Frame = +2 Query: 230 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 K + SD +VV P DP G+LETPV +SPLV W+++NLPAY Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAY 53
>PSAL_ANASP (P58577) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 172 Score = 51.6 bits (122), Expect = 5e-07 Identities = 24/45 (53%), Positives = 31/45 (68%) Frame = +2 Query: 230 KAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 K + SD +VV P DP G+LETPV +SPLV W+++NLPAY Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAY 53
>PSAL_SYNEL (Q8DGB4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 155 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/35 (54%), Positives = 27/35 (77%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 ++V+P NGDPF+G L TP++ S LV ++ NLPAY Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAY 38
>PSAL_SYNEN (P25902) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 148 Score = 48.1 bits (113), Expect = 5e-06 Identities = 19/35 (54%), Positives = 27/35 (77%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 ++V+P NGDPF+G L TP++ S LV ++ NLPAY Sbjct: 3 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAY 37
>PSAL_SYNY3 (P37277) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 157 Score = 46.2 bits (108), Expect = 2e-05 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 QVVQ NGDPF+G L TP++ S ++ NLPAY Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAY 40
>PSAL_GUITH (O78469) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/35 (57%), Positives = 25/35 (71%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 Q V+P N DPF+G+L TP+T+S LSNLPAY Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAY 37
>PSAL_ISOGA (Q5ENP6) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 + V+P N DPF+G+L TPVT+S YL NLP Y Sbjct: 5 EFVKPFNNDPFVGNLSTPVTTSTATKLYLGNLPIY 39
>PSAL_CYACA (Q9TM17) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 45.4 bits (106), Expect = 3e-05 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +2 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 ++P +PF+G+L TPV SS + WYL NLP Y Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIY 37
>PSAL_ODOSI (P49486) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 43.5 bits (101), Expect = 1e-04 Identities = 18/33 (54%), Positives = 23/33 (69%) Frame = +2 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 ++P N DPF+G L TP+TSS + L NLPAY Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAY 37
>PSAL_CYAME (Q85FP8) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 140 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/33 (54%), Positives = 22/33 (66%) Frame = +2 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 ++P N DPF+G L TP+ SS L YLS LP Y Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIY 37
>PSAL_PORPU (P51222) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 153 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/35 (48%), Positives = 24/35 (68%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 + ++P N DPF+G+L TPV++S L NLPAY Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAY 37
>PSAL_GRATL (Q6B8P4) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 150 Score = 40.8 bits (94), Expect = 8e-04 Identities = 17/33 (51%), Positives = 23/33 (69%) Frame = +2 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 +Q N DPF+G+L TPV++S L+NLPAY Sbjct: 5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAY 37
>PSAL_SYNP2 (Q54753) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 152 Score = 32.3 bits (72), Expect = 0.29 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 281 GDPFIGSLETPVTSSPLVAWYLSNLPAY 364 GDP +G+L TP+ +S +++NLP Y Sbjct: 8 GDPQVGNLATPINASAFSKAFINNLPGY 35
>PSAL_SYNP7 (P95822) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 166 Score = 32.0 bits (71), Expect = 0.38 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 281 GDPFIGSLETPVTSSPLVAWYLSNLPAY 364 G P IG+L TP+ SSP +++ LP Y Sbjct: 10 GTPEIGNLATPINSSPFTRTFINALPIY 37
>PSAL_PROMA (O87787) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 199 Score = 31.6 bits (70), Expect = 0.50 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 266 VQPINGDPFIGSLETPVTSSPLVAWYLSNLPAY 364 V P++ DP +G+L TPV S +L+NLP Y Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFY 70
>PSAL_SYNVU (P25937) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) (Fragment) Length = 20 Score = 31.2 bits (69), Expect = 0.65 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = +2 Query: 260 QVVQPINGDPFIGSLETP 313 ++V+P NGDPF+G L TP Sbjct: 3 ELVKPYNGDPFVGHLSTP 20
>PSAL_GLOVI (Q7NIE7) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 147 Score = 31.2 bits (69), Expect = 0.65 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = +2 Query: 284 DPFIGSLETPVTSSPLVAWYLSNLP 358 DP G+L TPV +S + W++ NLP Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLP 35
>SYI_WOLPM (Q73HW7) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1111 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/97 (18%), Positives = 41/97 (42%) Frame = +2 Query: 59 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 238 D G + +ED + ++ P+ + SG ++ ++G + V+K + Sbjct: 365 DGTGVVHTAPGFGEEDFYLCQSHDIPVICPIDNSGKFTAEVSDLAGVHVFDANDTVIKKL 424 Query: 239 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 349 K ++ Q I+ P +TP+ + +WY++ Sbjct: 425 KGQGSWFKTEQYIHNYPHCWRTDTPLIYRTMPSWYVA 461
>PUTP_SALTY (P10502) Sodium/proline symporter (Proline permease)| Length = 502 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/75 (29%), Positives = 30/75 (40%) Frame = -2 Query: 279 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 100 LMGW Y G + A A D + HA+ + +TW+ + A AVA+ Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292 Query: 99 FDSHTLNSALPAASN 55 N AL A N Sbjct: 293 IAYFNNNPALAGAVN 307
>PSAL_SYNP6 (P31084) Photosystem I reaction center subunit XI (PSI-L) (PSI| subunit V) Length = 165 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 281 GDPFIGSLETPVTSSPLVAWYLSNLPAY 364 G P IG L TP SSP +++ LP Y Sbjct: 9 GTPEIGDLATPTNSSPFTRTFINALPIY 36
>GLMM_XANAC (Q8PJ31) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 28.9 bits (63), Expect = 3.2 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGHVRR 198 Q+ VE G GG GH +C GD L VL+A G R+ Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALGRDRQ 359
>PDXJ_SILPO (Q3V7J3) Pyridoxal phosphate biosynthetic protein pdxJ (PNP| synthase) Length = 248 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = +1 Query: 118 HCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGCQV 243 H +C + + G L+ A R AH APLR GC+V Sbjct: 91 HAVCIVPEKREERTTEGGLEVAREENRLAHFIAPLREVGCRV 132
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = -1 Query: 127 ICSGHLDVLLRLPHAQ--LCSACSVKW 53 ICSG L+ +R PH + C+AC +W Sbjct: 20 ICSGVLEEPVRAPHCEHAFCNACITQW 46
>Y449_MYCBO (P0A5C8) Hypothetical protein Mb0449c| Length = 142 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 112 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 237 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132
>Y441_MYCTU (P0A5C7) Hypothetical protein Rv0441c/MT0457| Length = 142 Score = 28.5 bits (62), Expect = 4.2 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +1 Query: 112 DGHCICSSHGEPGDEERLGVLQAAGHVRRFAHPEAPLRRQGC 237 DG S G D R GV+ + R A P++P +GC Sbjct: 91 DGRAQASDAGPDDDTARCGVVPIRALLHRDAAPDSPTAAKGC 132
>CAP_DICDI (P54654) Adenylyl cyclase-associated protein (CAP)| Length = 464 Score = 28.5 bits (62), Expect = 4.2 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 9/101 (8%) Frame = +2 Query: 5 KHLASGTXSSSCNTSMPFDAAGRAELSVWESKEDIE--------MATAYAPPMASQVMKS 160 K +ASG SSS ++S AAG + SV E + ++ ++ AP + +QV + Sbjct: 25 KSIASGVASSSSSSSPSSGAAGPSSASVKEFQNLVDQHITPFVALSKKLAPEVGNQVEQL 84 Query: 161 GLACSKPRGM-SGASLTRRPRFVVKAVKSDKPTYQVVQPIN 280 A + + + AS +++P S + ++++P+N Sbjct: 85 VKAIDAEKALINTASQSKKP--------SQETLLELIKPLN 117
>SYI_WOLTR (Q5GSS3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1134 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/97 (17%), Positives = 40/97 (41%) Frame = +2 Query: 59 DAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAV 238 D G + +ED + ++ P + SG ++ ++G + ++K + Sbjct: 373 DGTGVVHTAPGFGEEDFYLCQSHDIPAICPIDNSGRFTAEVSDLTGIHVFDTNDAIIKKL 432 Query: 239 KSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLS 349 K ++ Q I+ P +TP+ + +WY++ Sbjct: 433 KEQGNWFKTEQYIHNYPHCWRTDTPLIYRAMPSWYVA 469
>AKR1_USTMA (Q4P6L3) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 844 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 2 LKHLASGTXSSSCNTSMPFDAAGRAELSVWES 97 L+ A S N +MP DAAGR + S+W + Sbjct: 790 LRSGADDDDDDSDNATMPVDAAGRRKWSMWSN 821
>VGLD_HHV1H (P06476) Glycoprotein D precursor| Length = 393 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -2 Query: 204 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 64 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 99 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 150
>PUTP_ECOLI (P07117) Sodium/proline symporter (Proline permease)| Length = 502 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/75 (28%), Positives = 30/75 (40%) Frame = -2 Query: 279 LMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPLFITWLAMGGAYAVAISMSS 100 LMGW Y G + A A D + HA+ + +TW+ + A AVA+ Sbjct: 241 LMGWGLGYFGQPHILARFM--------AADSHHSIVHARRISMTWMILCLAGAVAVGFFG 292 Query: 99 FDSHTLNSALPAASN 55 + AL A N Sbjct: 293 IAYFNDHPALAGAVN 307
>VGLD_HHV1P (P57083) Glycoprotein D precursor| Length = 394 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -2 Query: 204 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 64 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>VGLD_HHV11 (Q69091) Glycoprotein D precursor| Length = 394 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%) Frame = -2 Query: 204 SEAPDMPRGLEH---AKP--LFITWLAMGGAYAVAISMSSFDSHTLNSALPA 64 SEAP + RG +P L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGASEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>TGT_IDILO (Q5QVL2) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 373 Score = 28.1 bits (61), Expect = 5.5 Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 4/90 (4%) Frame = +2 Query: 44 TSMPFDAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRF 223 T + FD LSV E KED+ + P + KPR + G +P Sbjct: 203 TDIGFDGYAIGGLSVGEPKEDMMRILEHTAPQMPE--------QKPRYLMGVG---KPED 251 Query: 224 VVKAVKSDKPTYQVVQPI----NGDPFIGS 301 +V+AV+ + V P NG FI + Sbjct: 252 LVEAVRRGIDMFDCVMPTRNARNGHLFIST 281
>MAGC1_HUMAN (O60732) Melanoma-associated antigen C1 (MAGE-C1 antigen)| (Cancer-testis antigen CT7) Length = 1142 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = +2 Query: 128 APPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLE 307 +PP + P+G S P+ + S P Y P+ G+ F SL+ Sbjct: 567 SPPQGEDSLSPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLYFPQSPLQGEEFQSSLQ 626 Query: 308 TPVT 319 +PV+ Sbjct: 627 SPVS 630
>TGT_PSEAE (Q9HXH9) Queuine tRNA-ribosyltransferase (EC 2.4.2.29)| (tRNA-guanine transglycosylase) (Guanine insertion enzyme) Length = 372 Score = 27.7 bits (60), Expect = 7.2 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Frame = +2 Query: 56 FDAAGRAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKA 235 FD LSV E KE++ + PP + KPR + G +P +V+ Sbjct: 205 FDGLAIGGLSVGEPKEEMIRVLDFLPPQ--------MPADKPRYLMGVG---KPEDLVEG 253 Query: 236 VKSDKPTYQVVQPI----NGDPFIGS 301 V+ + V P NG F+ S Sbjct: 254 VRRGVDMFDCVMPTRNARNGHLFVDS 279
>GLMM_XANC5 (Q3BRL9) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 186 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRASTGDGIVSALQVLEALG 355
>SM3L2_ARATH (Q9FNI6) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 2 (EC 3.6.1.-) (SMARCA3-like protein 2) Length = 1029 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -2 Query: 261 WYVGLSDLTALTTKRGLRVSEAPDMPRGLEHAKPL 157 W+VG S+L L+T +G ++ ++ H+K L Sbjct: 111 WFVGCSELAGLSTCKGRKLKSGDELVFTFPHSKGL 145
>Y270_COXBU (Q83EP5) Putative reductase CBU0270 (EC 1.3.1.-)| Length = 406 Score = 27.7 bits (60), Expect = 7.2 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +2 Query: 41 NTSMPFDAAGRAELSVWESKEDIE 112 N ++P D+ GR + WE +ED++ Sbjct: 321 NQNIPTDSEGRIRIDDWEMREDVQ 344
>GLMM_XYLFT (Q87DJ6) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGH 189 Q+ VE GV GG GH +C GD L VL+ H Sbjct: 315 QALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRH 356
>GLMM_XYLFA (Q9PDB1) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 448 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAGH 189 Q+ VE GV GG GH +C GD L VL+ H Sbjct: 315 QALVESGGVLGGEASGHLLCLDRATTGDGIVSALQVLEVLRH 356
>MTNA_XYLFT (Q87A92) Probable methylthioribose-1-phosphate isomerase (EC| 5.3.1.23) (MTR-1-P isomerase) Length = 354 Score = 27.7 bits (60), Expect = 7.2 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 74 AELSVWESKEDIEMATAYAPPMASQVMKSG 163 A L+VWE ++D AT A A+ +MKSG Sbjct: 206 ARLTVWELQQDGIDATLIADSAAAHLMKSG 235
>FABZ_SYNPX (Q7U8Q6) (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase| (EC 4.2.1.-) ((3R)-hydroxymyristoyl ACP dehydrase) Length = 156 Score = 27.7 bits (60), Expect = 7.2 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = -2 Query: 327 GLEVTGVSRLPMN---------GSPLMGWTTWYVGLSDLTALTTKRGLRVSEAPDMPRGL 175 G+ TG+ + +N G PLM G+ + A+ GL V++ PD+P+GL Sbjct: 43 GVSATGIKNVTVNEPQFQGHFPGRPLMP------GVLIVEAMAQVGGLIVTQMPDLPKGL 96
>VGLD_HHV1A (P36318) Glycoprotein D precursor| Length = 394 Score = 27.7 bits (60), Expect = 7.2 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%) Frame = -2 Query: 204 SEAPDMPRG-----LEHAKPLFITWLAMGGAYAVAISMSSFDSHTLNSALPA 64 SEAP + RG + L I W MGG A+ I++ + + N +L A Sbjct: 100 SEAPQIVRGGSEDVRKQPYNLTIAWFRMGGNCAIPITVMEYTECSYNKSLGA 151
>VRK2_MOUSE (Q8BN21) Serine/threonine-protein kinase VRK2 (EC 2.7.11.1)| (Vaccinia-related kinase 2) Length = 503 Score = 27.3 bits (59), Expect = 9.4 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Frame = +2 Query: 89 WESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGASLTRRPRFVVKAVKSDKPTYQVV 268 WE+K D +A A + + P G S + L + +V DKP YQ + Sbjct: 250 WEAKLDDPVAVQTAKTNLLDELPESVLKWAPSGSSCSELVKYLMYVHNLAYDDKPDYQKL 309 Query: 269 QPI---NGDPFIGSLE 307 + I +G P +G LE Sbjct: 310 KKILNPDGVP-LGPLE 324
>GLUQ_ECOLI (P27305) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 298 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +1 Query: 64 CRQSRVERVGVEGGHRDGHCICSSHGEPGDEERL----GVLQAAGHVRRFAHPEAPLRRQ 231 C ++R++ +G G DGHC HG R+ V Q +R H + L R+ Sbjct: 103 CTRARIQSIG---GIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLARE 159
>RBGPR_CAEEL (Q22670) Rab3 GTPase-activating protein regulatory subunit (Rab3| GTPase-activating protein 2) Length = 1307 Score = 27.3 bits (59), Expect = 9.4 Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 5/100 (5%) Frame = +2 Query: 71 RAELSVWESKEDIEMATAYAPPMASQVMKSGLACSKPRGMSGAS---LTRRPRFVVKAVK 241 + + VW+ D E A + + +++ L + S A +T RFVV Sbjct: 58 KENVEVWDDWGDKEEGAAENSLESDESIRNWLFRCDLKTYSDAEYLLVTWESRFVVLRKP 117 Query: 242 SDKPTYQVV--QPINGDPFIGSLETPVTSSPLVAWYLSNL 355 D+P Y++V Q I GDP + +T+S + LSN+ Sbjct: 118 PDEPVYKIVCKQYIEGDP----ISNEITASSIFG--LSNV 151
>GLMM_XANOR (Q5GXR8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 186 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLMM_XANCP (Q8P7S2) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 186 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLMM_XANC8 (Q4UWC8) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 449 Score = 27.3 bits (59), Expect = 9.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = +1 Query: 70 QSRVERVGVEGGHRDGHCICSSHGEPGD--EERLGVLQAAG 186 Q+ VE G GG GH +C GD L VL+A G Sbjct: 315 QALVEGGGTLGGETSGHLLCLDRATTGDGIVSALQVLEALG 355
>GLMM_PSEPK (Q88DV3) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 446 Score = 27.3 bits (59), Expect = 9.4 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 79 VERVGVEGGHRDGHCICSSHGEPGD 153 +ER + GG GH +C +H GD Sbjct: 315 LEREWLVGGENSGHVVCCNHTTTGD 339
>GLUQ_ECO57 (Q8X909) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 308 Score = 27.3 bits (59), Expect = 9.4 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 4/60 (6%) Frame = +1 Query: 64 CRQSRVERVGVEGGHRDGHCICSSHGEPGDEERL----GVLQAAGHVRRFAHPEAPLRRQ 231 C ++R++ +G G DGHC HG R+ V Q +R H + L R+ Sbjct: 113 CTRARIQSIG---GIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLARE 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,173,050 Number of Sequences: 219361 Number of extensions: 868418 Number of successful extensions: 3273 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 3204 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3273 length of database: 80,573,946 effective HSP length: 96 effective length of database: 59,515,290 effective search space used: 1428366960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
