ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62m20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L... 559 e-156
2dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 4e-59
3dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 4e-59
4dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 4e-59
5dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
6dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 1e-56
7gb|AY103985.1| Zea mays PCO103239 mRNA sequence 174 1e-40
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 7e-30
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 7e-30
10emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112... 139 7e-30
11emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa... 139 7e-30
12dbj|AK063111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 4e-19
13ref|NM_117349.2| Arabidopsis thaliana unknown protein AT4G12800 ... 44 0.31
14ref|XM_363340.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.31
15ref|XM_726405.1| Aspergillus fumigatus Af293 hypothetical protei... 44 0.31
16emb|BX255925.17| Human DNA sequence from clone RP13-122B23 on ch... 44 0.31
17emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, ... 44 0.31
18emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, ... 44 0.31
19emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, B... 44 0.31
20emb|AJ245867.1|ATH245867 Arabidopsis thaliana mRNA for photosyst... 44 0.31
21dbj|AK128153.1| Homo sapiens cDNA FLJ46276 fis, clone TESTI4029676 44 0.31
22gb|AY097427.1| Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, c... 44 0.31
23gb|AF446350.1|AF446350 Arabidopsis thaliana AT4g12800/T20K18_150... 44 0.31
24gb|AY059949.1| Arabidopsis thaliana probable photosystem I chain... 44 0.31
25gb|AF428447.1|AF428447 Arabidopsis thaliana AT4g12800/T20K18_150... 44 0.31
26emb|BX826431.1|CNS0A4G8 Arabidopsis thaliana Full-length cDNA Co... 44 0.31
27emb|BX826834.1|CNS0A38Y Arabidopsis thaliana Full-length cDNA Co... 44 0.31
28emb|BX826723.1|CNS0A3CA Arabidopsis thaliana Full-length cDNA Co... 44 0.31
29emb|BX826537.1|CNS0A35T Arabidopsis thaliana Full-length cDNA Co... 44 0.31
30emb|BX841515.1|CNS09YGY Arabidopsis thaliana Full-length cDNA Co... 44 0.31
31gb|AY087339.1| Arabidopsis thaliana clone 34400 mRNA, complete s... 44 0.31
32gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.2
33gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequ... 42 1.2
34gb|BC083003.1| Xenopus laevis cDNA clone IMAGE:3397120 40 4.8
35gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.8
36gb|BC074210.1| Xenopus laevis MGC83376 protein, mRNA (cDNA clone... 40 4.8
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.8
38ref|XM_656558.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.8
39gb|AC102609.7| Mus musculus, clone RP23-403I3, complete sequence 40 4.8
40emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photo... 40 4.8
41emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.8
42gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, co... 40 4.8 
>gb|M61146.1|BLYPSAL Hordeum vulgare photosystem I protein (PSI-L) mRNA, complete cds
          Length = 777

 Score =  559 bits (282), Expect = e-156
 Identities = 284/285 (99%)
 Strand = Plus / Plus

                                                                       
Query: 80  ttgagcgtgtgggagtcgaaggaggacatcgagatggccactgcatatgctcctcccatg 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgagcgtgtgggagtcgaaggaggacatcgagatggccactgcatatgctcctcccatg 60

                                                                       
Query: 140 gcgagccaggtgatgaagagcggcttggcgtgctccaagccgcggggcatgtccggcgct 199
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gcgagccaggtgatgaagagcggcttggcgtgctccaagccgcggggcatgtccggcgct 120

                                                                       
Query: 200 tcgctcacccggaggccccgcttcgtcgtcaaggctgtcaagtctgacaagccgacgtac 259
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgctcacccggaggccccgcttcgtcgtcaaggctgtcaagtctgacaagccgacgtac 180

                                                                       
Query: 260 caagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccggtcacc 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccggtcacc 240

                                                        
Query: 320 tccagccccctcgtcgcgtggtacctntccaacctccccgcctac 364
           |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 241 tccagccccctcgtcgcgtggtacctctccaacctccccgcctac 285
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>dbj|AK105154.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-F07, full
           insert sequence
          Length = 964

 Score =  236 bits (119), Expect = 4e-59
 Identities = 216/248 (87%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 73  gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 129

                                                                       
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 229
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||   |||
Sbjct: 130 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 189

                                                                       
Query: 230 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 289
           |||||  || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 190 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 249

                                                                       
Query: 290 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctntcc 349
           |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||
Sbjct: 250 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 309

                   
Query: 350 aacctccc 357
           ||||||||
Sbjct: 310 aacctccc 317
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>dbj|AK099109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030F01, full
           insert sequence
          Length = 932

 Score =  236 bits (119), Expect = 4e-59
 Identities = 216/248 (87%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 68  gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 124

                                                                       
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 229
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||   |||
Sbjct: 125 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 184

                                                                       
Query: 230 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 289
           |||||  || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 185 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 244

                                                                       
Query: 290 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctntcc 349
           |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||
Sbjct: 245 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 304

                   
Query: 350 aacctccc 357
           ||||||||
Sbjct: 305 aacctccc 312
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>dbj|AK059750.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-B01, full
           insert sequence
          Length = 985

 Score =  236 bits (119), Expect = 4e-59
 Identities = 216/248 (87%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 90  gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 146

                                                                       
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 229
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||   |||
Sbjct: 147 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagtc 206

                                                                       
Query: 230 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 289
           |||||  || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 207 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 266

                                                                       
Query: 290 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctntcc 349
           |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||
Sbjct: 267 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 326

                   
Query: 350 aacctccc 357
           ||||||||
Sbjct: 327 aacctccc 334
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>dbj|AK119162.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D08, full
           insert sequence
          Length = 923

 Score =  228 bits (115), Expect = 1e-56
 Identities = 215/248 (86%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 118 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 174

                                                                       
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 229
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||   | |
Sbjct: 175 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagcc 234

                                                                       
Query: 230 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 289
           |||||  || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 235 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 294

                                                                       
Query: 290 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctntcc 349
           |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||
Sbjct: 295 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 354

                   
Query: 350 aacctccc 357
           ||||||||
Sbjct: 355 aacctccc 362
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>dbj|AK058207.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-A09, full
           insert sequence
          Length = 923

 Score =  228 bits (115), Expect = 1e-56
 Identities = 215/248 (86%), Gaps = 3/248 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 118 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 174

                                                                       
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttcgtcgtc 229
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||   | |
Sbjct: 175 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttcacagcc 234

                                                                       
Query: 230 aaggctgtcaagtctgacaagccgacgtaccaagtggtccagcccatcaacggcgacccg 289
           |||||  || ||||||| ||||| |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 235 aaggccatccagtctgagaagccaacgtaccaggtggtgcagcccatcaatggcgacccc 294

                                                                       
Query: 290 ttcatcggcagcctggagacgccggtcacctccagccccctcgtcgcgtggtacctntcc 349
           |||||||||||||||||||||||||| ||||||||||| || ||||| |||||||| |||
Sbjct: 295 ttcatcggcagcctggagacgccggtgacctccagcccgctggtcgcctggtacctctcc 354

                   
Query: 350 aacctccc 357
           ||||||||
Sbjct: 355 aacctccc 362
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>gb|AY103985.1| Zea mays PCO103239 mRNA sequence
          Length = 1657

 Score =  174 bits (88), Expect = 1e-40
 Identities = 105/111 (94%)
 Strand = Plus / Plus

                                                                        
Query: 254  acgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggagacgccg 313
            |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 acgtaccaggtggtgcagcccatcaacggcgacccgttcatcggcagcctggagacgccg 1069

                                                               
Query: 314  gtcacctccagccccctcgtcgcgtggtacctntccaacctccccgcctac 364
            |||||||||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1070 gtcacctccagcccgctcgtggcgtggtacctctccaacctcccggcctac 1120



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 132 ctcccatggcgagccaggtgatgaagagc 160
           |||||||||||||||||||||||||||||
Sbjct: 879 ctcccatggcgagccaggtgatgaagagc 907
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 7e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                            
Query: 249      agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 308
                |||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 13160888 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 13160947

                                                                 
Query: 309      cgccggtcacctccagccccctcgtcgcgtggtacctntccaacctccc 357
                ||||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 13160948 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctccc 13160996



 Score =  103 bits (52), Expect = 4e-19
 Identities = 99/114 (86%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                            
Query: 110      gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
                |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 13159779 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 13159835

                                                                      
Query: 170      tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 223
                |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||
Sbjct: 13159836 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 13159889
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 7e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                            
Query: 249      agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 308
                |||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 13115163 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 13115222

                                                                 
Query: 309      cgccggtcacctccagccccctcgtcgcgtggtacctntccaacctccc 357
                ||||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 13115223 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctccc 13115271



 Score =  103 bits (52), Expect = 4e-19
 Identities = 99/114 (86%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                            
Query: 110      gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
                |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 13114054 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 13114110

                                                                      
Query: 170      tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 223
                |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||
Sbjct: 13114111 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 13114164
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>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 193499

 Score =  139 bits (70), Expect = 7e-30
 Identities = 99/109 (90%)
 Strand = Plus / Minus

                                                                          
Query: 249    agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 308
              |||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 169854 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 169795

                                                               
Query: 309    cgccggtcacctccagccccctcgtcgcgtggtacctntccaacctccc 357
              ||||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 169794 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctccc 169746



 Score =  103 bits (52), Expect = 4e-19
 Identities = 99/114 (86%), Gaps = 3/114 (2%)
 Strand = Plus / Minus

                                                                          
Query: 110    gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
              |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 170963 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 170907

                                                                    
Query: 170    tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 223
              |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||
Sbjct: 170906 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 170853
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>emb|AL731785.2|CNS08C89 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 178827

 Score =  139 bits (70), Expect = 7e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                          
Query: 249    agccgacgtaccaagtggtccagcccatcaacggcgacccgttcatcggcagcctggaga 308
              |||| |||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct: 150091 agccaacgtaccaggtggtgcagcccatcaatggcgaccccttcatcggcagcctggaga 150150

                                                               
Query: 309    cgccggtcacctccagccccctcgtcgcgtggtacctntccaacctccc 357
              ||||||| ||||||||||| || ||||| |||||||| |||||||||||
Sbjct: 150151 cgccggtgacctccagcccgctggtcgcctggtacctctccaacctccc 150199



 Score =  103 bits (52), Expect = 4e-19
 Identities = 99/114 (86%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                          
Query: 110    gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
              |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 148982 gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 149038

                                                                    
Query: 170    tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 223
              |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||
Sbjct: 149039 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 149092
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>dbj|AK063111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-D07, full
           insert sequence
          Length = 470

 Score =  103 bits (52), Expect = 4e-19
 Identities = 99/114 (86%), Gaps = 3/114 (2%)
 Strand = Plus / Plus

                                                                       
Query: 110 gagatggccactgcatatgctcctcccatggcgagccaggtgatgaagagcggcttggcg 169
           |||||||||||||| ||||||||   ||||||||||||| ||||||||||| |||||| |
Sbjct: 90  gagatggccactgcttatgctcc---catggcgagccagctgatgaagagcagcttggtg 146

                                                                 
Query: 170 tgctccaagccgcggggcatgtccggcgcttcgctcacccggaggccccgcttc 223
           |||||||||||| ||||  |||| || |||||||| ||  ||||||||||||||
Sbjct: 147 tgctccaagccgagggggctgtctggtgcttcgctgacaaggaggccccgcttc 200
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>ref|NM_117349.2| Arabidopsis thaliana unknown protein AT4G12800 mRNA, complete cds
          Length = 984

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 398 tcgcgtggtacctttccaacctccc 422
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>ref|XM_363340.1| Magnaporthe grisea 70-15 hypothetical protein (MG01266.4) partial
            mRNA
          Length = 1611

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 291  tcatcggcagcctggagacgcc 312
            ||||||||||||||||||||||
Sbjct: 1028 tcatcggcagcctggagacgcc 1007
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>ref|XM_726405.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00570)
           partial mRNA
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 331 cgtcgcgtggtacctntccaacctccccg 359
           ||||||||||||||  |||||||||||||
Sbjct: 414 cgtcgcgtggtaccgttccaacctccccg 442
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>emb|BX255925.17| Human DNA sequence from clone RP13-122B23 on chromosome 9, complete
             sequence
          Length = 100719

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 63    ctgcaggcagagcagagttgag 84
             ||||||||||||||||||||||
Sbjct: 22900 ctgcaggcagagcagagttgag 22879
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>emb|AL161535.2|ATCHRIV35 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 35
          Length = 199280

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 333  tcgcgtggtacctntccaacctccc 357
            ||||||||||||| |||||||||||
Sbjct: 3105 tcgcgtggtacctttccaacctccc 3129
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>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34
          Length = 196107

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 333    tcgcgtggtacctntccaacctccc 357
              ||||||||||||| |||||||||||
Sbjct: 194212 tcgcgtggtacctttccaacctccc 194236
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>emb|AL049640.1|ATT20K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  T20K18 (ESSA project)
          Length = 79375

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 333   tcgcgtggtacctntccaacctccc 357
             ||||||||||||| |||||||||||
Sbjct: 52600 tcgcgtggtacctttccaacctccc 52624
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>emb|AJ245867.1|ATH245867 Arabidopsis thaliana mRNA for photosystem I subunit XI precursor
          Length = 928

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 366 tcgcgtggtacctttccaacctccc 390
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>dbj|AK128153.1| Homo sapiens cDNA FLJ46276 fis, clone TESTI4029676
          Length = 2907

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  ctgcaggcagagcagagttgag 84
           ||||||||||||||||||||||
Sbjct: 294 ctgcaggcagagcagagttgag 315
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>gb|AY097427.1| Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds
          Length = 660

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 251 tcgcgtggtacctttccaacctccc 275
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>gb|AF446350.1|AF446350 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds
          Length = 821

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 287 tcgcgtggtacctttccaacctccc 311
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>gb|AY059949.1| Arabidopsis thaliana probable photosystem I chain XI precursor
           (At4g12800; T20K18.150) mRNA, complete cds
          Length = 853

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 293 tcgcgtggtacctttccaacctccc 317
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>gb|AF428447.1|AF428447 Arabidopsis thaliana AT4g12800/T20K18_150 mRNA, complete cds
          Length = 842

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 287 tcgcgtggtacctttccaacctccc 311
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>emb|BX826431.1|CNS0A4G8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB26ZA06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 823

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 273 tcgcgtggtacctttccaacctccc 297
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>emb|BX826834.1|CNS0A38Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB68ZB09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 762

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 274 tcgcgtggtacctttccaacctccc 298
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>emb|BX826723.1|CNS0A3CA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB57ZH08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 816

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 268 tcgcgtggtacctttccaacctccc 292
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>emb|BX826537.1|CNS0A35T Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB36ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 797

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 249 tcgcgtggtacctttccaacctccc 273
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>emb|BX841515.1|CNS09YGY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZH07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 837

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 289 tcgcgtggtacctttccaacctccc 313
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>gb|AY087339.1| Arabidopsis thaliana clone 34400 mRNA, complete sequence
          Length = 944

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 333 tcgcgtggtacctntccaacctccc 357
           ||||||||||||| |||||||||||
Sbjct: 399 tcgcgtggtacctttccaacctccc 423
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 308    acgccggtcacctccagcccc 328
              |||||||||||||||||||||
Sbjct: 970905 acgccggtcacctccagcccc 970925
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>gb|AY943952.1| Streptomyces sp. F11 plasmid pFP11, complete sequence
          Length = 35159

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 294  tcggcagcctggagacgccgg 314
            |||||||||||||||||||||
Sbjct: 1728 tcggcagcctggagacgccgg 1748
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>gb|BC083003.1| Xenopus laevis cDNA clone IMAGE:3397120
          Length = 1320

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacatcgagatggccactgc 123
           ||||||||||||||||||||
Sbjct: 5   gacatcgagatggccactgc 24
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 151    gatgaagagcggcttggcgtgctc 174
              ||||| ||||||||||||||||||
Sbjct: 394400 gatgatgagcggcttggcgtgctc 394377
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>gb|BC074210.1| Xenopus laevis MGC83376 protein, mRNA (cDNA clone MGC:83376
           IMAGE:7007890), complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 gacatcgagatggccactgc 123
           ||||||||||||||||||||
Sbjct: 7   gacatcgagatggccactgc 26
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 151     gatgaagagcggcttggcgtgctc 174
               ||||| ||||||||||||||||||
Sbjct: 1125109 gatgatgagcggcttggcgtgctc 1125086
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>ref|XM_656558.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4046.2), mRNA
          Length = 1476

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 258 accaagtggtccagcccatc 277
           ||||||||||||||||||||
Sbjct: 927 accaagtggtccagcccatc 908
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>gb|AC102609.7| Mus musculus, clone RP23-403I3, complete sequence
          Length = 208575

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 62     gctgcaggcagagcagagttgagc 85
              ||||| ||||||||||||||||||
Sbjct: 202331 gctgccggcagagcagagttgagc 202308
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>emb|X64445.1|SOPSAL S.oleracea psaL mRNA for subunit XI of photosystem I reaction
           center
          Length = 834

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 338 tggtacctntccaacctccccgcctac 364
           |||||||| ||||||||||| ||||||
Sbjct: 330 tggtacctatccaacctcccagcctac 356
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 151     gatgaagagcggcttggcgtgctc 174
               ||||| ||||||||||||||||||
Sbjct: 1006069 gatgatgagcggcttggcgtgctc 1006046
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>gb|AC104896.13| Mus musculus chromosome 1, clone RP23-299F18, complete sequence
          Length = 184316

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    gctgcaggcagagcagagttgagc 85
             ||||| ||||||||||||||||||
Sbjct: 14532 gctgccggcagagcagagttgagc 14509


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,186,606
Number of Sequences: 3902068
Number of extensions: 2186606
Number of successful extensions: 39706
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 39515
Number of HSP's gapped (non-prelim): 179
length of query: 364
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 342
effective length of database: 17,147,199,772
effective search space: 5864342322024
effective search space used: 5864342322024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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