>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0035J16, complete sequence
          Length = 170233

 Score =  147 bits (74), Expect = 5e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                         
Query: 472   gtactcaacctttgtgaactgggaactatggtggccacaatttcctatccttgtttactt 531
             ||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 69560 gtactcaacatttgtgaattgggaactgtggtggccacaatttcctatcttggtttattt 69501

                                                                   
Query: 532   caaagagacccaaacaaaacccgaaggccagattcatttcttcccagtgatttt 585
             ||| ||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 69500 caaggagacccaaacaaaacccgaagggcaaattcatttcttccctgtgatttt 69447



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                         
Query: 278   gggatatctggtgtgtttgcatatgcagacaatcttcttgccgctgcacctgtaggcctg 337
             |||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 70588 gggatagctggtgcatttgcatatgcagacaatcttcttgctgctgcacctgtaggccta 70529

                   
Query: 338   ctgggg 343
             ||||||
Sbjct: 70528 ctgggg 70523



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 400   ggaagtgaaagtgggcaatcagctgcaggagtcaggtgagaacgtatttgttggtggcaa 459
             |||||||||||||||| ||||| |  ||||||||||||| || |||||||| ||||||||
Sbjct: 69870 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttgtcggtggcaa 69811

                        
Query: 460   gaaccgttgga 470
             ||| |||||||
Sbjct: 69810 gaatcgttgga 69800



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 590   ggccgacaactctatgatattatggtggagcgtgctggacc 630
             |||||||| || ||||||  |||||||||||||||||||||
Sbjct: 69366 ggccgacagctttatgatgctatggtggagcgtgctggacc 69326

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  147 bits (74), Expect = 5e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                            
Query: 472      gtactcaacctttgtgaactgggaactatggtggccacaatttcctatccttgtttactt 531
                ||||||||| |||||||| |||||||| ||||||||||||||||||||| | ||||| ||
Sbjct: 19366211 gtactcaacatttgtgaattgggaactgtggtggccacaatttcctatcttggtttattt 19366152

                                                                      
Query: 532      caaagagacccaaacaaaacccgaaggccagattcatttcttcccagtgatttt 585
                ||| ||||||||||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 19366151 caaggagacccaaacaaaacccgaagggcaaattcatttcttccctgtgatttt 19366098



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                            
Query: 278      gggatatctggtgtgtttgcatatgcagacaatcttcttgccgctgcacctgtaggcctg 337
                |||||| ||||||  |||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 19367239 gggatagctggtgcatttgcatatgcagacaatcttcttgctgctgcacctgtaggccta 19367180

                      
Query: 338      ctgggg 343
                ||||||
Sbjct: 19367179 ctgggg 19367174



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 400      ggaagtgaaagtgggcaatcagctgcaggagtcaggtgagaacgtatttgttggtggcaa 459
                |||||||||||||||| ||||| |  ||||||||||||| || |||||||| ||||||||
Sbjct: 19366521 ggaagtgaaagtgggcgatcagttagaggagtcaggtgaaaatgtatttgtcggtggcaa 19366462

                           
Query: 460      gaaccgttgga 470
                ||| |||||||
Sbjct: 19366461 gaatcgttgga 19366451



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 590      ggccgacaactctatgatattatggtggagcgtgctggacc 630
                |||||||| || ||||||  |||||||||||||||||||||
Sbjct: 19366017 ggccgacagctttatgatgctatggtggagcgtgctggacc 19365977

>gb|AC134546.4| Mus musculus BAC clone RP24-471H17 from chromosome 18, complete
             sequence
          Length = 208921

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     gagaggagcagcagccatggcgacc 25
             |||||||||||||| ||||||||||
Sbjct: 62749 gagaggagcagcaggcatggcgacc 62773

>gb|AY045771.1| Arcanobacterium pyogenes phosphoglucomutase (pgmA) gene, partial cds;
            and neuraminidase NanP (nanP) gene, complete cds
          Length = 6367

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 254  tatcggctaccgatcgctata 274
            |||||||||||||||||||||
Sbjct: 6293 tatcggctaccgatcgctata 6313

>emb|AL163642.4|CNS01RIM Human chromosome 14 DNA sequence BAC R-688D15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 184037

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 189    tatctctgtttgggagaaaga 209
              |||||||||||||||||||||
Sbjct: 129631 tatctctgtttgggagaaaga 129651

>gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, complete sequence
          Length = 198485

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    caaagagacccaaacaaaac 551
              ||||||||||||||||||||
Sbjct: 160235 caaagagacccaaacaaaac 160216

>gb|AC167973.4| Mus musculus BAC clone RP23-453B4 from chromosome 9, complete sequence
          Length = 182190

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    tgccgtgcaagggacatttt 139
              ||||||||||||||||||||
Sbjct: 108309 tgccgtgcaagggacatttt 108290

>gb|AC112953.15| Mus musculus chromosome 7, clone RP23-44J21, complete sequence
          Length = 205513

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 506    ccacaatttcctatccttgt 525
              ||||||||||||||||||||
Sbjct: 135816 ccacaatttcctatccttgt 135797

>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence
          Length = 242112

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 566   catttcttcccagtgatttt 585
             ||||||||||||||||||||
Sbjct: 62676 catttcttcccagtgatttt 62657

>gb|AC121857.2| Mus musculus BAC clone RP24-98A9 from 1, complete sequence
          Length = 171124

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 385   tgatgatgatgccctggaag 404
             ||||||||||||||||||||
Sbjct: 75787 tgatgatgatgccctggaag 75806

>gb|BC027353.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone
           MGC:28195 IMAGE:3988926), complete cds
          Length = 2763

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 tgccgtgcaagggacatttt 139
           ||||||||||||||||||||
Sbjct: 716 tgccgtgcaagggacatttt 697

>gb|BC006699.1| Mus musculus tripartite motif protein 29, mRNA (cDNA clone
           IMAGE:3498575), partial cds
          Length = 2582

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 120 tgccgtgcaagggacatttt 139
           ||||||||||||||||||||
Sbjct: 532 tgccgtgcaagggacatttt 513

>emb|AL353576.18| Human DNA sequence from clone RP11-335J9 on chromosome 10 Contains the
             5' end of the gene for a novel protein possible ortholog
             of mouse C1q-like protein (gliacolin) and a CpG island,
             complete sequence
          Length = 52065

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    tatcttctcccctcttcctc 55
             ||||||||||||||||||||
Sbjct: 23973 tatcttctcccctcttcctc 23992

>gb|AC163342.2| Mus musculus BAC clone RP24-115M13 from chromosome 9, complete
            sequence
          Length = 204620

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 120  tgccgtgcaagggacatttt 139
            ||||||||||||||||||||
Sbjct: 1665 tgccgtgcaagggacatttt 1646

>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16
          Length = 349635

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 206   aagaccgcgaagaagaccac 225
             ||||||||||||||||||||
Sbjct: 18732 aagaccgcgaagaagaccac 18713

>emb|AL645599.14| Mouse DNA sequence from clone RP23-285F4 on chromosome 11 Contains the
             5' end of a novel gene, a ribosomal protein L7A (Rpl7a)
             pseudogene and a CpG island, complete sequence
          Length = 127405

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   tgccctggaagtgaaagtgggcaa 417
             |||| |||||||||||||||||||
Sbjct: 82882 tgccatggaagtgaaagtgggcaa 82859

>gb|AC005185.1| Homo sapiens Xp22 BAC GSHB-383H3 (Genome Systems Human BAC Library)
             complete sequence
          Length = 124351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 567   atttcttcccagtgattttc 586
             ||||||||||||||||||||
Sbjct: 86002 atttcttcccagtgattttc 86021

>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    ctcttcctcgccgctcctcc 66
             ||||||||||||||||||||
Sbjct: 37653 ctcttcctcgccgctcctcc 37634

>gb|AC090108.15| Homo sapiens 12q BAC RP11-395D5 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 168837

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 400   ggaagtgaaagtgggcaatc 419
             ||||||||||||||||||||
Sbjct: 55146 ggaagtgaaagtgggcaatc 55127

>emb|CR388026.3| Mouse DNA sequence from clone RP23-39L16 on chromosome 2, complete
             sequence
          Length = 26069

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 543   aaacaaaacccgaaggccag 562
             ||||||||||||||||||||
Sbjct: 22262 aaacaaaacccgaaggccag 22243

>gb|AC153649.4| Mus musculus BAC clone RP24-93B8 from chromosome 1, complete sequence
          Length = 162838

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 385    tgatgatgatgccctggaag 404
              ||||||||||||||||||||
Sbjct: 105211 tgatgatgatgccctggaag 105230

>gb|AC158680.4| Mus musculus 6 BAC RP23-112F6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206705

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 564    ttcatttcttcccagtgattttca 587
              ||||||||||| ||||||||||||
Sbjct: 120066 ttcatttcttctcagtgattttca 120089

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        ggagcagcagccatggcgac 24
                ||||||||||||||||||||
Sbjct: 13995746 ggagcagcagccatggcgac 13995727

>gb|AC009117.8| Homo sapiens chromosome 16 clone RP11-481E4, complete sequence
          Length = 172868

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ctgctggggctgcttctctt 354
             ||||||||||||||||||||
Sbjct: 92263 ctgctggggctgcttctctt 92244

>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ggagcagcagccatggcgac 24
             ||||||||||||||||||||
Sbjct: 11875 ggagcagcagccatggcgac 11856

>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds;
             and unknown gene
          Length = 18555

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 3     gaggagcagcagccatggcg 22
             ||||||||||||||||||||
Sbjct: 12262 gaggagcagcagccatggcg 12281

>gb|AC079681.38| Mus musculus strain C57BL/6J chromosome 10 clone rp23-310n21, complete
              sequence
          Length = 216807

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 566    catttcttcccagtgatttt 585
              ||||||||||||||||||||
Sbjct: 199415 catttcttcccagtgatttt 199396

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 5        ggagcagcagccatggcgac 24
                ||||||||||||||||||||
Sbjct: 14003988 ggagcagcagccatggcgac 14003969

>emb|AL831757.5| Mouse DNA sequence from clone RP23-279A21 on chromosome X, complete
             sequence
          Length = 85948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   ttcccagtgattttcaatgg 591
             ||||||||||||||||||||
Sbjct: 70879 ttcccagtgattttcaatgg 70860


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,166,868
Number of Sequences: 3902068
Number of extensions: 6166868
Number of successful extensions: 114533
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114381
Number of HSP's gapped (non-prelim): 152
length of query: 630
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 607
effective length of database: 17,143,297,704
effective search space: 10405981706328
effective search space used: 10405981706328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)