ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63b17 |
|---|---|
| Clone Library Name | barley_pub |
>CAHC_HORVU (P40880) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 324 Score = 343 bits (879), Expect = 2e-94 Identities = 170/186 (91%), Positives = 170/186 (91%) Frame = +3 Query: 3 ANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLK 182 ANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTT ERLK Sbjct: 72 ANWCYATVAPRARSSTIAASLGTPAPSSSASFRPKLIRTTPVQAAPVAPALMDAAVERLK 131 Query: 183 TGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIAN 362 TGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIAN Sbjct: 132 TGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIAN 191 Query: 363 MVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDW 542 MVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDW Sbjct: 192 MVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDW 251 Query: 543 VRIGFP 560 VRIGFP Sbjct: 252 VRIGFP 257
>CAHC_TOBAC (P27141) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 321 Score = 174 bits (440), Expect = 2e-43 Identities = 83/130 (63%), Positives = 98/130 (75%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 E +K GF FKTE Y+K P + L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 115 EHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVR 174 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 NIANMVPAY K +Y+GVG+AIEYAV LKVE IVVIGHS CGGIK L+SL +S F Sbjct: 175 NIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAF 234 Query: 531 VEDWVRIGFP 560 +EDWV+IG P Sbjct: 235 IEDWVKIGLP 244
>CAHC_SPIOL (P16016) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 319 Score = 170 bits (431), Expect = 2e-42 Identities = 82/130 (63%), Positives = 97/130 (74%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 +R+K GF KFK E Y+K P + L GQAPK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 113 QRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVR 172 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 NIANMVP + K+KYAGVG+AIEYAV LKVE IVVIGHS CGGIK L+S D + F Sbjct: 173 NIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDF 232 Query: 531 VEDWVRIGFP 560 +EDWV+I P Sbjct: 233 IEDWVKICLP 242
>CAHX_FLABR (P46511) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 165 bits (418), Expect = 7e-41 Identities = 76/130 (58%), Positives = 97/130 (74%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDF 243 Query: 531 VEDWVRIGFP 560 +EDWV++ P Sbjct: 244 IEDWVKVCLP 253
>CAHX_FLABI (P46510) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 330 Score = 165 bits (418), Expect = 7e-41 Identities = 76/130 (58%), Positives = 97/130 (74%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDF 243 Query: 531 VEDWVRIGFP 560 +EDWV++ P Sbjct: 244 IEDWVKVCLP 253
>CAH1_FLALI (P46512) Carbonic anhydrase 1 (EC 4.2.1.1) (Carbonate dehydratase| 1) Length = 330 Score = 165 bits (418), Expect = 7e-41 Identities = 76/130 (58%), Positives = 97/130 (74%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 124 ERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 183 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDF 243 Query: 531 VEDWVRIGFP 560 +EDWV++ P Sbjct: 244 IEDWVKVCLP 253
>CAHX_FLAPR (P46281) Carbonic anhydrase (EC 4.2.1.1) (Carbonate dehydratase)| Length = 329 Score = 165 bits (417), Expect = 9e-41 Identities = 76/130 (58%), Positives = 97/130 (74%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 ER+K+GF KFKTE + P ++ L GQ+PK+MVFAC+DSRVCPS L +PGEAF +R Sbjct: 123 ERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVR 182 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N+ANMVP + K KY+GVG+A+EYAV LKV+ I VIGHSRCGGIK L++ D S F Sbjct: 183 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDF 242 Query: 531 VEDWVRIGFP 560 +EDWV++ P Sbjct: 243 IEDWVKVCLP 252
>CAH2_ARATH (P42737) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) Length = 259 Score = 162 bits (411), Expect = 5e-40 Identities = 89/175 (50%), Positives = 105/175 (60%) Frame = +3 Query: 36 ARSSTIAASLGTPAPSSSASFRPKLIRTTXXXXXXXXXXXXXXXXERLKTGFEKFKTEVY 215 A+ I A L + S S SF P ER+K GF FK E Y Sbjct: 29 AKVKKITAELQAASSSDSKSFDP---------------------VERIKEGFVTFKKEKY 67 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 + P + L GQ+PKYMVFAC+DSRVCPS L PG+AF +RNIANMVP + K KYA Sbjct: 68 ETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYA 127 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFP 560 GVG+AIEYAV LKVE IVVIGHS CGGIK L+S ++S F+EDWV+I P Sbjct: 128 GVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLP 182
>CAHC_PEA (P17067) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) [Contains: Carbonic anhydrase, 27 kDa isoform; Carbonic anhydrase, 25 kDa isoform] Length = 328 Score = 162 bits (410), Expect = 6e-40 Identities = 79/130 (60%), Positives = 93/130 (71%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 ER+KTGF FK E YDK P + L GQ+P +MVFAC+DSRVCPS L +PGEAF +R Sbjct: 122 ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVR 181 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N+AN+VP Y + KYAG G+AIEYAV LKV IVVIGHS CGGIK LLS S F Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDF 241 Query: 531 VEDWVRIGFP 560 +E+WV+IG P Sbjct: 242 IEEWVKIGLP 251
>CAHC_ARATH (P27140) Carbonic anhydrase, chloroplast precursor (EC 4.2.1.1)| (Carbonate dehydratase) Length = 347 Score = 161 bits (407), Expect = 1e-39 Identities = 79/130 (60%), Positives = 94/130 (72%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 E +K GF KFK E Y+ P + L GQ+PKYMVFAC+DSRVCPS L +PG+AF +R Sbjct: 130 ETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVR 189 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 NIANMVP + K KY GVG+AIEYAV LKVE IVVIGHS CGGIK L+S ++S F Sbjct: 190 NIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDF 249 Query: 531 VEDWVRIGFP 560 +EDWV+I P Sbjct: 250 IEDWVKICLP 259
>CAH2_FLALI (P46513) Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase| 2) (Fragment) Length = 190 Score = 140 bits (352), Expect = 3e-33 Identities = 66/112 (58%), Positives = 82/112 (73%) Frame = +3 Query: 225 PDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVG 404 P + L GQ+PK++VFAC+DSRVCPS L +PGEAF +RNIANMVP Y K++G G Sbjct: 2 PTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAG 61 Query: 405 SAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFP 560 +AIEYAV LKVE IVVIGHS CGGIK L+S+ D + F+E WV++G P Sbjct: 62 AAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLP 113
>CYNT_SYNY3 (Q54735) Carbonic anhydrase (EC 4.2.1.1)| Length = 274 Score = 95.9 bits (237), Expect = 7e-20 Identities = 49/126 (38%), Positives = 72/126 (57%) Frame = +3 Query: 171 ERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIR 350 +RL G +KF+ + D FE L GQ P+ + C+DSRV P++ E G+ F IR Sbjct: 2 QRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIR 61 Query: 351 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHF 530 N N++P Y G G+A+EYA+ AL++ I+V GHS CG +K LL L + + Sbjct: 62 NAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL-NSLQEKLPL 119 Query: 531 VEDWVR 548 V DW++ Sbjct: 120 VYDWLK 125
>CYNT_ECOLI (P0ABE9) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 94.0 bits (232), Expect = 3e-19 Identities = 48/121 (39%), Positives = 71/121 (58%) Frame = +3 Query: 186 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 365 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 366 VPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWV 545 VP+Y GV +++EYAV AL+V IV+ GHS CG + A+ S + D V W+ Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWL 123 Query: 546 R 548 R Sbjct: 124 R 124
>CYNT_ECO57 (P0ABF0) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 219 Score = 94.0 bits (232), Expect = 3e-19 Identities = 48/121 (39%), Positives = 71/121 (58%) Frame = +3 Query: 186 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 365 GF KF+ E + K+ F+ L Q+P+ + +C+DSR+ P + EPG+ F IRN N+ Sbjct: 7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNI 66 Query: 366 VPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWV 545 VP+Y GV +++EYAV AL+V IV+ GHS CG + A+ S + D V W+ Sbjct: 67 VPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIASCQ--CMDHMPAVSHWL 123 Query: 546 R 548 R Sbjct: 124 R 124
>CYNT_SYNP7 (P27134) Carbonic anhydrase (EC 4.2.1.1)| Length = 272 Score = 92.8 bits (229), Expect = 6e-19 Identities = 48/125 (38%), Positives = 68/125 (54%) Frame = +3 Query: 174 RLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRN 353 +L G F+T Y D FE GQ P+ + C+DSR+ P++ GE F IRN Sbjct: 3 KLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRN 62 Query: 354 IANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFV 533 N++P + G G++IEYA+ AL +E +VV GHS CG +K LL L +D V Sbjct: 63 AGNLIPPFGAAN-GGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKLNQLQED-MPLV 120 Query: 534 EDWVR 548 DW++ Sbjct: 121 YDWLQ 125
>CAN_SHIFL (P61518) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 74.3 bits (181), Expect = 2e-13 Identities = 39/91 (42%), Positives = 54/91 (59%) Frame = +3 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKA 488 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 ---SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CAN_ECOLI (P61517) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 220 Score = 74.3 bits (181), Expect = 2e-13 Identities = 39/91 (42%), Positives = 54/91 (59%) Frame = +3 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 ++ P FFE L Q P+++ C+DSRV GLEPGE F RN+AN+V N Sbjct: 20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCL- 78 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKA 488 S ++YAV L+VE I++ GH CGG++A Sbjct: 79 ---SVVQYAVDVLEVEHIIICGHYGCGGVQA 106
>CYNT_HELPJ (Q9ZN54) Carbonic anhydrase (EC 4.2.1.1)| Length = 221 Score = 73.9 bits (180), Expect = 3e-13 Identities = 35/123 (28%), Positives = 69/123 (56%), Gaps = 2/123 (1%) Frame = +3 Query: 186 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 365 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + IRN+ N+ Sbjct: 6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNV 65 Query: 366 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVED 539 +P K + +++EYA+ + V+ +++ GHS CG ++ + D + ++ + Sbjct: 66 IPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIAN 125 Query: 540 WVR 548 W++ Sbjct: 126 WIQ 128
>CAN_HAEIN (P45148) Carbonic anhydrase 2 (EC 4.2.1.1)| Length = 229 Score = 71.6 bits (174), Expect = 1e-12 Identities = 39/97 (40%), Positives = 54/97 (55%) Frame = +3 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 ++ +F+ L Q P Y+ C+DSRV LEPGE F RN+AN V N Sbjct: 20 EENSTYFKELADHQTPHYLWIGCSDSRVPAEKLTNLEPGELFVHRNVANQVIHTDFNCL- 78 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKD 506 S ++YAV LK+E I++ GH+ CGGI A ++ KD Sbjct: 79 ---SVVQYAVDVLKIEHIIICGHTNCGGIHAAMADKD 112
>CYNT_HELPY (O24855) Carbonic anhydrase 1 (EC 4.2.1.1)| Length = 221 Score = 68.6 bits (166), Expect = 1e-11 Identities = 35/123 (28%), Positives = 67/123 (54%), Gaps = 2/123 (1%) Frame = +3 Query: 186 GFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANM 365 G +F+ Y++ + +E LK Q P + +C DSRV P++ G +PGE + I N+ N+ Sbjct: 6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNV 65 Query: 366 VPAYCKNKYA-GVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDS-FHFVED 539 P K + ++IEYA+ + V+ +++ GHS CG ++ + D + ++ + Sbjct: 66 NPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIAN 125 Query: 540 WVR 548 W++ Sbjct: 126 WIQ 128
>NCE3_YEAST (P53615) Non-classical export protein 3| Length = 221 Score = 65.1 bits (157), Expect = 1e-10 Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%) Frame = +3 Query: 195 KFKTEVYDKKPDFFEPLKA-GQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVP 371 K+ +++ + +P F A GQ+P + C+DSR + LG+ PGE FT +N+AN+ Sbjct: 27 KWASQMNNIQPTLFPDHNAKGQSPHTLFIGCSDSRYNENC-LGVLPGEVFTWKNVANI-- 83 Query: 372 AYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLS 497 C ++ + + +E+A+ LKV +++ GH+ CGGIK L+ Sbjct: 84 --CHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCLT 123
>GLMM_PSEAE (Q9HV50) Phosphoglucosamine mutase (EC 5.4.2.10)| Length = 445 Score = 33.1 bits (74), Expect = 0.55 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = -3 Query: 485 LDSTAAAVANHHDDLNLERADGVFDGRSNTGVLVLAVGRDHVGDVADGEGLTGLKAQ 315 LD AAV HH DL + FDG + ++V DH G V DG+ L L A+ Sbjct: 221 LDGLQAAVVEHHADLGI-----AFDGDGDRVMMV-----DHTGAVVDGDELLFLIAR 267
>NFM_BOVIN (O77788) Neurofilament triplet M protein (160 kDa neurofilament| protein) (Neurofilament medium polypeptide) (NF-M) Length = 925 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/36 (47%), Positives = 21/36 (58%) Frame = +1 Query: 307 RSPWALSPVRPSPSATSPTWSRPTARTSTPVLDRPS 414 +SP A SP SP A SPT PTA+ +PV P+ Sbjct: 628 KSPTAKSPEAKSPEAKSPTAKSPTAK--SPVAKSPT 661 Score = 30.0 bits (66), Expect = 4.6 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +1 Query: 307 RSPWALSPVRPSPSATSPTWSRPTARTSTP 396 +SP A SP SP+A SPT P A++ P Sbjct: 663 KSPEAKSPEAKSPTAKSPTAKSPAAKSPAP 692 Score = 29.6 bits (65), Expect = 6.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +1 Query: 307 RSPWALSPVRPSPSATSPTWSRPTART 387 +SP A SP SP A SPT PTA++ Sbjct: 658 KSPTAKSPEAKSPEAKSPTAKSPTAKS 684 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +1 Query: 289 TRVCARRSPWALSPVRPSPSATSPTWSRPTARTST 393 T+ +SP A SP SP+A SPT P A++ T Sbjct: 627 TKSPTAKSPEAKSPEAKSPTAKSPTAKSPVAKSPT 661 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +1 Query: 307 RSPWALSPVRPSPSATSPTWSRPTARTST 393 +SP A SP SP A SP PTA++ T Sbjct: 653 KSPVAKSPTAKSPEAKSPEAKSPTAKSPT 681 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 307 RSPWALSPVRPSPSATSPTWSRPTARTST 393 +SP A SPV SP+A SP P A++ T Sbjct: 648 KSPTAKSPVAKSPTAKSPEAKSPEAKSPT 676
>ATCU1_RHIME (P58341) Copper-transporting ATPase 1 (EC 3.6.3.4)| Length = 826 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -3 Query: 548 PDPVLNEVEGVVCA-ILEREQSLDSTAAAVANHHDDLNLERADGVFDGRSNTGVLVLAV 375 P P +EG+ CA + R + S VA+ +L ERA F G +TG ++LA+ Sbjct: 14 PAPTDFGIEGMTCASCVRRVEKAISAVPGVASATVNLATERASVQFTGAPDTGGVLLAI 72
>SMBP2_MOUSE (P40694) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent| helicase IGHMBP2) (Immunoglobulin mu-binding protein 2) (SMUBP-2) (Cardiac transcription factor 1) (CATF1) Length = 993 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = -3 Query: 521 GVVCAILEREQSLDSTAAAVANHHDDLNLERADGVFDGRSNTGVLVLAVGRDHVGDVADG 342 G + I +D +++N H +L ++ DG F GR VL+ V + G+V Sbjct: 532 GDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDG-FQGREKEAVLLTFVRSNRKGEV--- 587 Query: 341 EGLTGLKAQGDRRAHTRVGAREHH 270 G A+ DRR + V H Sbjct: 588 ----GFLAE-DRRINVAVTRARRH 606
>Y1315_MYCBO (P64798) Hypothetical protein Mb1315| Length = 163 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/87 (26%), Positives = 37/87 (42%) Frame = +3 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT-------D 65 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCG 476 V ++ + L I+++ H+ CG Sbjct: 66 DVIRSLAISQRLLGTREIILLHHTDCG 92
>Y1284_MYCTU (P64797) Hypothetical protein Rv1284/MT1322| Length = 163 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/87 (26%), Positives = 37/87 (42%) Frame = +3 Query: 216 DKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYA 395 D F PL + + AC D+R+ LG++ GEA IRN +V Sbjct: 13 DYASGFKGPLPMPPSKHIAIVACMDARLDVYRMLGIKEGEAHVIRNAGCVVT-------D 65 Query: 396 GVGSAIEYAVCALKVEVIVVIGHSRCG 476 V ++ + L I+++ H+ CG Sbjct: 66 DVIRSLAISQRLLGTREIILLHHTDCG 92
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 26.6 bits (57), Expect(2) = 5.7 Identities = 22/66 (33%), Positives = 27/66 (40%) Frame = +2 Query: 122 PRPGRARRTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACV 301 P+PG G R GAP+ G + R + QGRPG Q G +R Sbjct: 164 PKPG--------GARPGAPKPGGARPSGPG---QDRGQQGGQGRPGGQRPGAPAQR---- 208 Query: 302 PVGHPG 319 P G PG Sbjct: 209 PGGRPG 214 Score = 21.6 bits (44), Expect(2) = 5.7 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = +3 Query: 21 TVAPRARSSTIAASLGTPAPSSSASFRP 104 + AP+A ++ A+ PAP+ S RP Sbjct: 100 SAAPKAPAAQQPAAPSAPAPAPSQGPRP 127
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 6/52 (11%) Frame = +1 Query: 283 APTRVCARRSPWALSPV----RPSPSATSPTWSR--PTARTSTPVLDRPSNT 420 +PT +P A SP P+P+ATSPT + PT+ +TP + S T Sbjct: 522 SPTPAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPT 573
>SMBP2_MESAU (Q60560) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent| helicase IGHMBP2) (Immunoglobulin mu-binding protein 2) (SMUBP-2) (Insulin II gene enhancer-binding protein) (RIPE3B-binding complex 3B2 p110 subunit) (RIP-1) Length = 989 Score = 29.3 bits (64), Expect = 7.9 Identities = 22/84 (26%), Positives = 36/84 (42%) Frame = -3 Query: 521 GVVCAILEREQSLDSTAAAVANHHDDLNLERADGVFDGRSNTGVLVLAVGRDHVGDVADG 342 G + I +D +++N H +L ++ DG F GR V++ V + G+V Sbjct: 532 GDIAVIAPYNLQVDLLRQSLSNKHPELEIKSVDG-FQGREKEAVILTFVRSNRKGEV--- 587 Query: 341 EGLTGLKAQGDRRAHTRVGAREHH 270 G A+ DRR + V H Sbjct: 588 ----GFLAE-DRRINVAVTRARRH 606
>ZO2_HUMAN (Q9UDY2) Tight junction protein ZO-2 (Zonula occludens 2 protein)| (Zona occludens 2 protein) (Tight junction protein 2) Length = 1190 Score = 29.3 bits (64), Expect = 7.9 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 286 PTRVCARRSPWALSPVRPSPSATSPTWSRPTARTSTPV 399 P+ V +P A + P P A PT+ R + STP+ Sbjct: 1019 PSAVAGNETPGASTKGYPPPVAAKPTFGRSILKPSTPI 1056
>YA28_SCHPO (Q09699) Hypothetical protein C2F7.08c in chromosome I| Length = 632 Score = 29.3 bits (64), Expect = 7.9 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +2 Query: 182 DRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLACVPVGH 313 D E QDRG +EAR +R QGR HG+ + L +P H Sbjct: 366 DAEMERQDRGYDREARRMRRRQGR---AKHGIMLPDLRDIPKIH 406
>IF2_COREF (Q8FPA7) Translation initiation factor IF-2| Length = 964 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Frame = +1 Query: 283 APTRVCARRSPWALSPVRPSPSATSPTWSRPTA-RTSTPVLDRPS 414 AP A P P P P+A P ++PTA + +TP P+ Sbjct: 97 APKPGTAAAKPTPAKPAAPKPTAAKPAPAKPTAPKPATPAFSGPT 141
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.3 bits (64), Expect = 7.9 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 143 RTCIDGRRRGAPQDRVREVQDRGLRQEARFLRAAQGRPGAQVHGVRVRRLA 295 R+ +D RRR + ++REV++R E RA + A+ H RR A Sbjct: 153 RSEMDARRRALEEAQIREVEERARAVEEAKRRAEEDARRAKEHEESARRQA 203 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,951,619 Number of Sequences: 219361 Number of extensions: 1315328 Number of successful extensions: 5851 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5227 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5796 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
