Clone Name | bah63b12 |
---|---|
Clone Library Name | barley_pub |
>E2F2_MOUSE (P56931) Transcription factor E2F2 (E2F-2)| Length = 443 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 95 PSPPLIPASTLLPVPATTQEDELLLAMAESDLEDKLNAIRKTNSNLVIIGKP 250 P PPL PA +L+P+ AT EL + + + L+ I NS L+ P Sbjct: 361 PPPPLPPAPSLVPLEATDNMLELSHPLLQQTEDQFLSPILAANSPLISFSPP 412
>TBCD5_MOUSE (Q80XQ2) TBC1 domain family member 5| Length = 815 Score = 30.4 bits (67), Expect = 4.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 166 PRHGRVRPRRQAERDPQDQQQPGDHRQAHQ 255 PRH ++ ++Q + Q QQQP +Q HQ Sbjct: 504 PRHHLLQQQQQQQHQQQQQQQPQQQQQQHQ 533
>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor| Length = 616 Score = 30.0 bits (66), Expect = 5.4 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 121 HTPPRARNYPGGRAPPRHGRVRPRRQAERDPQDQQQ 228 H P +R+YPG A RH + ER Q+Q++ Sbjct: 568 HALPPSRHYPGREAQARHAQQEEAEAEERRLQEQEE 603
>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 1168 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +2 Query: 101 PPLIPASTLLPVPATTQEDELLLAMAESDLEDKLNAIRKTNSNLVII 241 PP +P T P PA + L + A+SD ++A+ TN+N I+ Sbjct: 950 PPAVPTHT--PGPAPSPSPALTHSTAQSDSTSYISAVGNTNANGTIV 994
>ZCHC2_HUMAN (Q9C0B9) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 899 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/47 (31%), Positives = 25/47 (53%) Frame = +2 Query: 101 PPLIPASTLLPVPATTQEDELLLAMAESDLEDKLNAIRKTNSNLVII 241 PP +P T P PA + L + A+SD ++A+ TN+N ++ Sbjct: 679 PPAVPTHT--PGPAPSPSPALTHSTAQSDSTSYISAVGNTNANGTVV 723
>HXT2_YEAST (P23585) High-affinity glucose transporter HXT2| Length = 541 Score = 29.6 bits (65), Expect = 7.0 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 470 ASYHTLLCYMVFRRFGGFTYPWISSLMLSGIYRNTD 577 A+Y T++C + FGGF + W + +SG TD Sbjct: 51 AAYWTVICLCLMIAFGGFVFGWDTG-TISGFVNQTD 85
>HBL1_CAEEL (Q9XYD3) Hunchback-like protein| Length = 982 Score = 29.6 bits (65), Expect = 7.0 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +2 Query: 95 PSPPLIPASTLLPVPATTQEDELLLA-MAESDLEDKLNAIR 214 PSPPL +S + P+P T Q +E L + +A++ L L A R Sbjct: 885 PSPPLHSSSIVAPIPITPQPNEFLQSILAQASLLGPLLANR 925
>VGLB_HCMVA (P06473) Glycoprotein B precursor| Length = 906 Score = 29.6 bits (65), Expect = 7.0 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +2 Query: 86 RQWPSPPLIPASTLLPVPATTQEDELLLAMAESDLEDK 199 R+ P PP AST P Q ++LLA+A D E + Sbjct: 822 RKGPGPPSSDASTAAPPYTNEQAYQMLLALARLDAEQR 859
>DYNA_HUMAN (Q14203) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) (p135) Length = 1278 Score = 29.3 bits (64), Expect = 9.2 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +2 Query: 95 PSPPLIPASTLLPVPATTQEDELLLAMAESDLEDKLNAIR 214 P+P L + P+P+ ++E+E L A DLE+KL +R Sbjct: 197 PTPVLTSPGAVPPLPSPSKEEEGLRAQVR-DLEEKLETLR 235
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 29.3 bits (64), Expect = 9.2 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 154 GRAPPRHGRVRPRRQAERDPQDQQQPGDHRQAHQ 255 G +P R + PR +A+R+P+D P +A Q Sbjct: 110 GASPGRGAQGEPRGEAQREPEDSAAPERQEEAEQ 143
>DYNA_MOUSE (O08788) Dynactin-1 (150 kDa dynein-associated polypeptide)| (DP-150) (DAP-150) (p150-glued) Length = 1281 Score = 29.3 bits (64), Expect = 9.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 95 PSPPLIPASTLLPVPATTQEDELLLAMAESDLEDKLNAIRKTNS 226 P+P L P+P+ ++E+E L A DLE+KL +R S Sbjct: 197 PTPALTSPGAAPPLPSPSKEEEGLRAQVR-DLEEKLETLRLKRS 239 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,913,183 Number of Sequences: 219361 Number of extensions: 1064237 Number of successful extensions: 4047 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3692 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4030 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5310515667 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)