Clone Name | bah63b12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK109015.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A06, full insert sequence Length = 956 Score = 371 bits (187), Expect = 2e-99 Identities = 271/299 (90%) Strand = Plus / Plus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 56 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 115 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 116 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 175 Query: 178 cgagtccgacctcgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgat 237 ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 176 cgagtccgacctcgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgat 235 Query: 238 cataggcaagcccaccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacga 297 |||||||||||| ||| |||||| ||||||||||||||||| |||| || || ||||| Sbjct: 236 cataggcaagccaaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacga 295 Query: 298 cgtcgacaacgttgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 356 || ||||||||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 296 cgccgacaacgtcgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 354
>dbj|AK072362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B12, full insert sequence Length = 3594 Score = 371 bits (187), Expect = 2e-99 Identities = 271/299 (90%) Strand = Plus / Plus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 114 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 173 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 174 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 233 Query: 178 cgagtccgacctcgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgat 237 ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 234 cgagtccgacctcgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgat 293 Query: 238 cataggcaagcccaccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacga 297 |||||||||||| ||| |||||| ||||||||||||||||| |||| || || ||||| Sbjct: 294 cataggcaagccaaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacga 353 Query: 298 cgtcgacaacgttgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 356 || ||||||||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 354 cgccgacaacgtcgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 412
>dbj|AK064226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-G07, full insert sequence Length = 629 Score = 371 bits (187), Expect = 2e-99 Identities = 271/299 (90%) Strand = Plus / Plus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 170 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 171 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 230 Query: 178 cgagtccgacctcgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgat 237 ||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 231 cgagtccgacctcgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgat 290 Query: 238 cataggcaagcccaccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacga 297 |||||||||||| ||| |||||| ||||||||||||||||| |||| || || ||||| Sbjct: 291 cataggcaagccaaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacga 350 Query: 298 cgtcgacaacgttgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 356 || ||||||||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 351 cgccgacaacgtcgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 409
>gb|AY108044.1| Zea mays PCO134708 mRNA sequence Length = 647 Score = 250 bits (126), Expect = 5e-63 Identities = 249/290 (85%) Strand = Plus / Plus Query: 59 gagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggcg 118 |||||||||| |||||||||||||||||||||||||| |||||| ||||||| |||||| Sbjct: 99 gagatgctgcagttcccggcgctgatgcggcagtggccatcgccggcgctgatcccggcg 158 Query: 119 tccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggcc 178 ||||| || ||||||||||| || || |||||||||||||||| |||||| |||||||| Sbjct: 159 tccacgctgctccccgtgccggccacctcccaggaggacgagcttctcctctccatggcc 218 Query: 179 gagtccgacctcgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgatc 238 |||||||||||||| || |||||||||| |||||| |||||||||||| ||||||| ||| Sbjct: 219 gagtccgacctcgaggataagctgaacgagatccggaagaccaacagccacctggttatc 278 Query: 239 ataggcaagcccaccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacgac 298 || || |||||||| |||| ||||||||||||||||| |||||||| || ||||| Sbjct: 279 atcgggaagcccacgggcgacaccaaggaggagtacgacgctgaggtggaggacgacgat 338 Query: 299 gtcgacaacgttgacgaatccgacggggacgatttcgaccaagaaaccgg 348 | |||||||| || || || ||||| ||||| |||||||| || ||||| Sbjct: 339 gcagacaacgtcgaggagtctgacggcgacgacttcgaccaggagaccgg 388
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 210 bits (106), Expect = 4e-51 Identities = 133/142 (93%) Strand = Plus / Minus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22995916 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 22995857 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 22995856 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 22995797 Query: 178 cgagtccgacctcgaagacaag 199 ||||||||||||||| |||||| Sbjct: 22995796 cgagtccgacctcgaggacaag 22995775 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 198 agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 257 ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 22995657 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 22995598 Query: 258 acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 317 |||| ||||||||||||||||| |||| || || ||||||| ||||||||| || || | Sbjct: 22995597 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 22995538 Query: 318 ccgacggggacgatttcgaccaagaaaccggctgagccg 356 ||||||| ||||| |||||||| || ||||||||||||| Sbjct: 22995537 ccgacggagacgacttcgaccaggagaccggctgagccg 22995499
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 210 bits (106), Expect = 4e-51 Identities = 133/142 (93%) Strand = Plus / Minus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20313 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 20254 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 20253 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 20194 Query: 178 cgagtccgacctcgaagacaag 199 ||||||||||||||| |||||| Sbjct: 20193 cgagtccgacctcgaggacaag 20172 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 198 agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 257 ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 20054 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 19995 Query: 258 acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 317 |||| ||||||||||||||||| |||| || || ||||||| ||||||||| || || | Sbjct: 19994 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 19935 Query: 318 ccgacggggacgatttcgaccaagaaaccggctgagccg 356 ||||||| ||||| |||||||| || ||||||||||||| Sbjct: 19934 ccgacggagacgacttcgaccaggagaccggctgagccg 19896
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 210 bits (106), Expect = 4e-51 Identities = 133/142 (93%) Strand = Plus / Minus Query: 58 ggagatgctgcgattcccggcgctgatgcggcagtggccgtcgccgccgctgattccggc 117 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115718 ggagatgctgcagttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggc 115659 Query: 118 gtccacactcctccccgtgcccgcaactacccaggaggacgagctcctcctcgccatggc 177 |||||| || |||||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 115658 gtccacgctgctccccgtccccgccaccacccaggaggacgagctcctcctcgccatggc 115599 Query: 178 cgagtccgacctcgaagacaag 199 ||||||||||||||| |||||| Sbjct: 115598 cgagtccgacctcgaggacaag 115577 Score = 165 bits (83), Expect = 2e-37 Identities = 140/159 (88%) Strand = Plus / Minus Query: 198 agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 257 ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct: 115459 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 115400 Query: 258 acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 317 |||| ||||||||||||||||| |||| || || ||||||| ||||||||| || || | Sbjct: 115399 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 115340 Query: 318 ccgacggggacgatttcgaccaagaaaccggctgagccg 356 ||||||| ||||| |||||||| || ||||||||||||| Sbjct: 115339 ccgacggagacgacttcgaccaggagaccggctgagccg 115301
>emb|CR925725.10| Zebrafish DNA sequence from clone DKEYP-1D6 in linkage group 10, complete sequence Length = 171074 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 cgatccgcaagaccaacagcaa 228 |||||||||||||||||||||| Sbjct: 76766 cgatccgcaagaccaacagcaa 76745
>gb|AF223462.1|AF223462 Synechococcus PCC7918 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 465 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ggccgtcgccgccgctgattcc 114 |||||||||||||||||||||| Sbjct: 331 ggccgtcgccgccgctgattcc 352
>gb|AF223443.1|AF223443 Synechococcus sp. PS681 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 470 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 ggccgtcgccgccgctgattcc 114 |||||||||||||||||||||| Sbjct: 300 ggccgtcgccgccgctgattcc 321
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gccgtcgccgccgctgattcc 114 ||||||||||||||||||||| Sbjct: 103849 gccgtcgccgccgctgattcc 103829
>ref|XM_753397.1| Ustilago maydis 521 hypothetical protein (UM02343.1) partial mRNA Length = 2229 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 280 ggaggtggaagaggacgacgtcgac 304 |||||||||||||||||||| |||| Sbjct: 2190 ggaggtggaagaggacgacgacgac 2214
>gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complete sequence Length = 211680 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 ccgtccggctcccccaggctc 374 ||||||||||||||||||||| Sbjct: 198533 ccgtccggctcccccaggctc 198553
>emb|CR643565.2|CNS0EVJN Tetraodon nigroviridis full-length cDNA Length = 1279 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 caagctgaacgcgatccgcaa 216 ||||||||||||||||||||| Sbjct: 262 caagctgaacgcgatccgcaa 282
>emb|CR635850.1|CNS0EPLC Tetraodon nigroviridis full-length cDNA Length = 1276 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 caagctgaacgcgatccgcaa 216 ||||||||||||||||||||| Sbjct: 268 caagctgaacgcgatccgcaa 288
>gb|AC090824.6| Homo sapiens chromosome 17, clone CTD-2532B14, complete sequence Length = 187161 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 374 ccagtcccaatatgttggcct 394 ||||||||||||||||||||| Sbjct: 63394 ccagtcccaatatgttggcct 63414
>gb|AC025505.11| Homo sapiens, clone RP11-651N3, complete sequence Length = 166426 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 374 ccagtcccaatatgttggcct 394 ||||||||||||||||||||| Sbjct: 58395 ccagtcccaatatgttggcct 58375
>gb|AF223465.1|AF223465 Synechococcus PCC9005 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 468 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gccgtcgccgccgctgattcc 114 ||||||||||||||||||||| Sbjct: 341 gccgtcgccgccgctgattcc 361
>gb|AF223455.1|AF223455 Synechococcus sp. PS685 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gccgtcgccgccgctgattcc 114 ||||||||||||||||||||| Sbjct: 293 gccgtcgccgccgctgattcc 313
>gb|AF223428.1|AF223428 Synechococcus sp. PS680 CpcB (cpcB) and CpcA (cpcA) genes, partial cds Length = 514 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gccgtcgccgccgctgattcc 114 ||||||||||||||||||||| Sbjct: 339 gccgtcgccgccgctgattcc 359
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gccgtcgccgccgctgattcc 114 ||||||||||||||||||||| Sbjct: 12336371 gccgtcgccgccgctgattcc 12336351
>gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mRNA, complete cds Length = 1866 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 266 gaggagtacgacgcggaggtggaagagga 294 ||||||||||||| ||||| ||||||||| Sbjct: 1381 gaggagtacgacgaggaggaggaagagga 1409
>gb|L27212.1|HSBBICP Bovine herpesvirus type 1 transrepressor protein (BICP22) gene, complete cds Length = 3210 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 acgacgcggaggtggaagaggacg 296 |||||| ||||||||||||||||| Sbjct: 2392 acgacgaggaggtggaagaggacg 2369
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 cggcgctgatgcggcagtggccgtcgccgccg 106 |||||| ||| |||| |||||||||||||||| Sbjct: 4150098 cggcgccgatccggctgtggccgtcgccgccg 4150129
>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome Length = 135301 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 273 acgacgcggaggtggaagaggacg 296 |||||| ||||||||||||||||| Sbjct: 124802 acgacgaggaggtggaagaggacg 124825 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 acgacgcggaggtggaagaggacg 296 |||||| ||||||||||||||||| Sbjct: 113416 acgacgaggaggtggaagaggacg 113393
>emb|X76943.1|BHVBICP22 Bovine herpesvirus type 1 BICP22 gene Length = 3210 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 acgacgcggaggtggaagaggacg 296 |||||| ||||||||||||||||| Sbjct: 2392 acgacgaggaggtggaagaggacg 2369
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 cggcgctgatgcggcagtggccgtcgccgccg 106 |||||| ||| |||| |||||||||||||||| Sbjct: 340608 cggcgccgatccggctgtggccgtcgccgccg 340639
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 75 cggcgctgatgcggcagtggccgtcgccgccg 106 |||||| ||| |||| |||||||||||||||| Sbjct: 28244 cggcgccgatccggctgtggccgtcgccgccg 28275
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 ttctgcaaagcaatctgtac 414 |||||||||||||||||||| Sbjct: 1215468 ttctgcaaagcaatctgtac 1215487
>gb|AC016134.7| Homo sapiens chromosome 15 clone RP11-380D11 map 15q14, complete sequence Length = 170695 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gccgtcgccgccgctgattc 113 |||||||||||||||||||| Sbjct: 54790 gccgtcgccgccgctgattc 54771
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gctgaacgcgatccgcaaga 218 |||||||||||||||||||| Sbjct: 1452314 gctgaacgcgatccgcaaga 1452333
>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete sequence Length = 201181 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttggtggagaggagatgctg 67 |||||||||||||||||||| Sbjct: 44188 ttggtggagaggagatgctg 44169
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 acgttgacgaatccgacggg 325 |||||||||||||||||||| Sbjct: 2532838 acgttgacgaatccgacggg 2532819
>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence Length = 184888 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttggtggagaggagatgctg 67 |||||||||||||||||||| Sbjct: 24546 ttggtggagaggagatgctg 24565
>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence Length = 197633 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 caagctatcatactttactttgct 494 |||||||||||||| ||||||||| Sbjct: 112042 caagctatcatactctactttgct 112065
>dbj|AB209431.1| Homo sapiens mRNA for TYRO3 protein tyrosine kinase variant protein Length = 3059 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gccgtcgccgccgctgattc 113 |||||||||||||||||||| Sbjct: 20 gccgtcgccgccgctgattc 1 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,336,821 Number of Sequences: 3902068 Number of extensions: 4336821 Number of successful extensions: 96403 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95819 Number of HSP's gapped (non-prelim): 583 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)