ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62m10 |
|---|---|
| Clone Library Name | barley_pub |
>DCK_HUMAN (P27707) Deoxycytidine kinase (EC 2.7.1.74) (dCK)| Length = 260 Score = 127 bits (320), Expect = 2e-29 Identities = 69/169 (40%), Positives = 103/169 (60%), Gaps = 19/169 (11%) Frame = +1 Query: 34 EIVPEPVAKWQDIGP--DHF-----------NILDAFYAEPQRYAYTFQNYVFVTRVMQE 174 E+VPEPVA+W ++ D F N+L Y +P+R+++TFQ Y ++R+ + Sbjct: 49 EVVPEPVARWCNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQ 108 Query: 175 RESSSGI-----KPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSL-P 336 S +G KP+ ERSV+SDR +F ++E++ MNE E +IY W D + + Sbjct: 109 LASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQ 168 Query: 337 GLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLL 483 L DG IYL+A+P+TC R+ +R R+EE G+ L+YL+ LH KHESWLL Sbjct: 169 SLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLL 217
>DCK_RAT (P48769) Deoxycytidine kinase (EC 2.7.1.74) (dCK)| Length = 260 Score = 126 bits (317), Expect = 4e-29 Identities = 69/169 (40%), Positives = 100/169 (59%), Gaps = 19/169 (11%) Frame = +1 Query: 34 EIVPEPVAKWQDIGP--DHF-----------NILDAFYAEPQRYAYTFQNYVFVTRVMQE 174 E+VPEPVA+W ++ D F N+L Y +P+R+++ FQ+Y ++R+ + Sbjct: 49 EVVPEPVARWCNVQSTQDEFEELTTSQKSGGNVLQMMYEKPERWSFIFQSYACLSRIRAQ 108 Query: 175 RESSSGI-----KPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSL-P 336 S +G KP+ ERSV+SDR +F ++E+ MNE E +IY W D + S Sbjct: 109 LASLNGSLRDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQ 168 Query: 337 GLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLL 483 L DG IYLRA+P+ C R+ +R R EE G+ L+YL+ LH KHESWLL Sbjct: 169 SLELDGIIYLRATPEKCLNRIYIRGRDEEQGIPLEYLEKLHYKHESWLL 217
>DCK_MOUSE (P43346) Deoxycytidine kinase (EC 2.7.1.74) (dCK)| Length = 260 Score = 126 bits (317), Expect = 4e-29 Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 19/169 (11%) Frame = +1 Query: 34 EIVPEPVAKWQDIGP--DHF-----------NILDAFYAEPQRYAYTFQNYVFVTRVMQE 174 E+VPEPVA+W ++ + F N+L Y +P+R+++TFQ+Y ++R+ + Sbjct: 49 EVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQ 108 Query: 175 RESSSGI-----KPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSL-P 336 S +G KP+ ERSV+SDR +F ++E+ MNE E +IY W D + S Sbjct: 109 LASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQ 168 Query: 337 GLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLL 483 L DG IYLRA+P+ C R+ +R R+EE G+ L+YL+ LH KHESWLL Sbjct: 169 SLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLL 217
>DCK2_FOWPV (Q9J579) Probable deoxycytidine kinase FPV151 (EC 2.7.1.74) (dCK)| Length = 235 Score = 117 bits (293), Expect = 2e-26 Identities = 59/148 (39%), Positives = 92/148 (62%) Frame = +1 Query: 37 IVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLME 216 +V EP+ +W+ N+LD Y +P R+AYTFQ++ F TR ++ + K ++E Sbjct: 50 VVQEPLEQWRGN-----NLLDKLYKDPSRWAYTFQSHAFWTRTKTYIDALNKNKGNIILE 104 Query: 217 RSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKR 396 RSVFSD+ +F A+H+ ++++ E +IY+ + ++ + DG IYL+ SPD C+KR Sbjct: 105 RSVFSDKYIFATALHDIGYIDDTEWNIYNE-YSKWMTEFMDIKIDGIIYLKTSPDICYKR 163 Query: 397 MMVRKRSEEGGVSLDYLQGLHEKHESWL 480 M+ R R EE V +DYL LH+KHE WL Sbjct: 164 MLNRARHEENTVKIDYLNLLHDKHEKWL 191
>DGUOK_HUMAN (Q16854) Deoxyguanosine kinase, mitochondrial precursor (EC| 2.7.1.113) (dGK) Length = 277 Score = 113 bits (282), Expect = 5e-25 Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 18/194 (9%) Frame = +1 Query: 37 IVPEPVAKWQDI----------GPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESS 186 + EPVA WQ+I N+LD Y EP R++YTFQ + F++R+ + E Sbjct: 67 VATEPVATWQNIQAAGTQKACTAQSLGNLLDMMYREPARWSYTFQTFSFLSRLKVQLEPF 126 Query: 187 -----SGIKPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIP- 348 KP+++ ERSV+SDR +F + + E ++++E IY W ++ I Sbjct: 127 PEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITL 186 Query: 349 DGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLL--PSKGQGSGLLSVS 522 GFIYL+ASP C KR+ R R EE G+ L YL+ LH +HE+WL+ +K L+++ Sbjct: 187 HGFIYLQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIP 246 Query: 523 QLPIHMEGSLHPEI 564 L + + E+ Sbjct: 247 VLVLDVNDDFSEEV 260
>DGUOK_MOUSE (Q9QX60) Deoxyguanosine kinase, mitochondrial precursor (EC| 2.7.1.113) (dGK) Length = 277 Score = 110 bits (274), Expect = 4e-24 Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 16/166 (9%) Frame = +1 Query: 34 EIVPEPVAKWQDIGPDHF----------NILDAFYAEPQRYAYTFQNYVFVTRVMQERES 183 ++ EP+A WQ+I N+L+ Y EP R++YTFQ F++R+ + E Sbjct: 66 QVATEPIAAWQNIQAAGAQKDGTSKRLGNLLEMMYQEPARWSYTFQTLSFMSRLKVQLEP 125 Query: 184 SSGI-----KPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPG-LI 345 G K +R+ ERSV+SDR +F + + E ++++E IY W ++ L+ Sbjct: 126 IPGRLLQAEKSVRVFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLQEFANRLL 185 Query: 346 PDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLL 483 GFIYL+ASP C +R+ R R EE G+ L YLQ LH +HE W + Sbjct: 186 LHGFIYLQASPQVCMERLYQRDREEEKGIELAYLQQLHSQHEDWFI 231
>KITM_HUMAN (O00142) Thymidine kinase 2, mitochondrial precursor (EC 2.7.1.21)| (Mt-TK) Length = 266 Score = 105 bits (261), Expect = 1e-22 Identities = 61/186 (32%), Positives = 103/186 (55%), Gaps = 4/186 (2%) Frame = +1 Query: 31 VEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRL 210 VE++ EPV+KW+++ N L Y + R+ T Q YV +T M +R + + +RL Sbjct: 76 VEVLTEPVSKWRNVRGH--NPLGLMYHDASRWGLTLQTYVQLT--MLDRHTRPQVSSVRL 131 Query: 211 MERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCH 390 MERS+ S R +FV ++ + M E++ + WFD ++ ++ + D +YLR +P+TC+ Sbjct: 132 MERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDVSV-DLIVYLRTNPETCY 190 Query: 391 KRMMVRKRSEEGGVSLDYLQGLHEKHESWLLPSK--GQGSGLLSVSQLPIHMEG--SLHP 558 +R+ R R EE + L+YL+ +H HE WL+ + +L + HME L Sbjct: 191 QRLKKRCREEEKVIPLEYLEAIHHLHEEWLIKGSLFPMAAPVLVIEADHHHMERMLELFE 250 Query: 559 EIRDRV 576 + RDR+ Sbjct: 251 QNRDRI 256
>KITM_MACFA (Q9N0C5) Thymidine kinase 2, mitochondrial precursor (EC 2.7.1.21)| (Mt-TK) Length = 265 Score = 104 bits (260), Expect = 2e-22 Identities = 62/185 (33%), Positives = 104/185 (56%), Gaps = 3/185 (1%) Frame = +1 Query: 31 VEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRL 210 +E++ EPV+KW+++ N L Y + R+ T Q YV +T M +R + + +RL Sbjct: 76 IEVLTEPVSKWRNVRGH--NPLGLMYQDASRWGLTLQTYVQLT--MLDRHTCPQVSSVRL 131 Query: 211 MERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCH 390 MERS+ S R +FV ++ + M E++ + WFD ++ ++ I D +YLR +P+TC+ Sbjct: 132 MERSIHSARYIFVENLYRSGKMPEVDYVVLSEWFDWILRNMDVSI-DLIVYLRTNPETCY 190 Query: 391 KRMMVRKRSEEGGVSLDYLQGLHEKHESWLLP-SKGQGSGLLSVSQLPIHMEG--SLHPE 561 +R+ R R EE + L+YL+ +H HE WL+ S + + V + HME L + Sbjct: 191 QRLKRRCREEEKVIPLEYLEAIHHLHEEWLIKGSLFPVAAPVLVIEADHHMERMLQLFEQ 250 Query: 562 IRDRV 576 RDR+ Sbjct: 251 NRDRI 255
>KITM_MOUSE (Q9R088) Thymidine kinase 2, mitochondrial precursor (EC 2.7.1.21)| (Mt-TK) Length = 270 Score = 103 bits (256), Expect = 5e-22 Identities = 52/151 (34%), Positives = 90/151 (59%) Frame = +1 Query: 31 VEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRL 210 VE++ EPV KW+++ N L Y + R+ T Q YV +T M ++ + + P+RL Sbjct: 81 VEVLMEPVLKWRNV--HGHNPLSLMYHDASRWGLTLQTYVQLT--MLDQHTRPQMSPVRL 136 Query: 211 MERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCH 390 MERS++S R +FV ++ M E++ +I WFD +V ++ + D +YLR +P+ C+ Sbjct: 137 MERSIYSARYIFVENLYRGGKMPEVDYAILSEWFDWIVRNIDVSV-DLIVYLRTTPEICY 195 Query: 391 KRMMVRKRSEEGGVSLDYLQGLHEKHESWLL 483 +R+ +R R EE + ++YL +H +E WL+ Sbjct: 196 QRLKMRCREEEKVIPMEYLHAIHRLYEEWLV 226
>DNK_DROME (Q9XZT6) Deoxynucleoside kinase (EC 2.7.1.145) (Deoxyribonucleoside| kinase) (Dm-dNK) (Multispecific deoxynucleoside kinase) Length = 250 Score = 99.4 bits (246), Expect = 7e-21 Identities = 57/169 (33%), Positives = 96/169 (56%) Frame = +1 Query: 37 IVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLME 216 ++ EPV KW+++ + N+L+ Y +P+++A FQ+YV +T M + ++ K L++ME Sbjct: 49 LLTEPVEKWRNV--NGVNLLELMYKDPKKWAMPFQSYVTLT--MLQSHTAPTNKKLKIME 104 Query: 217 RSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKR 396 RS+FS R FV + + + + + W+ + S+ + D IYLR SP+ ++R Sbjct: 105 RSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKFIEESIH-VQADLIIYLRTSPEVAYER 163 Query: 397 MMVRKRSEEGGVSLDYLQGLHEKHESWLLPSKGQGSGLLSVSQLPIHME 543 + R RSEE V L YLQ LHE HE WL+ + S + V +++E Sbjct: 164 IRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLE 212
>DCK1_FOWPV (P21974) Probable deoxycytidine kinase FPV059 (EC 2.7.1.74) (dCK)| Length = 219 Score = 80.5 bits (197), Expect = 3e-15 Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 2/141 (1%) Frame = +1 Query: 76 PDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLMERSVFSDRMVFVRA 255 P ++ F+ P R++Y Q + + RV E + + ++ERS+FSDR VF A Sbjct: 47 PIEKELIRKFHENPSRWSYALQTHYCMKRVRMHLECFVPSR-VNILERSIFSDRYVFAEA 105 Query: 256 VHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEEG--G 429 +M++ E ++Y D L + DG IYLR P++C +R+ + +E+ Sbjct: 106 ATALGYMDDPEWALYCKQHDWYTDKLE-IQFDGIIYLRTIPESCKERINEKSITEKNYPN 164 Query: 430 VSLDYLQGLHEKHESWLLPSK 492 +S+DYL+ LHEKHE WL K Sbjct: 165 ISIDYLKTLHEKHELWLTQCK 185
>KITH_ICHV1 (P28855) Thymidine kinase (EC 2.7.1.21)| Length = 228 Score = 74.3 bits (181), Expect = 2e-13 Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 12/162 (7%) Frame = +1 Query: 31 VEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRL 210 V +V EPV +W + + N L+ Y +P YA FQN VF + V +R + I Sbjct: 45 VNVVEEPVDQW--VNHNGKNYLELSYTDPTGYAVPFQNLVFDSYVNVQRLQNPDI----- 97 Query: 211 MERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDG------------ 354 MERS S VF AV+ ++ + ++LPG+ G Sbjct: 98 MERSPMSATRVFC-AVNGSRGVIP-------------ATALPGMAARGEAVMRTIATRPV 143 Query: 355 FIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWL 480 F+YL P+ C +RM R R+ E GV LDYL+ LHE++E+WL Sbjct: 144 FVYLELPPEECLRRMRRRDRTGEAGVGLDYLRLLHERYEAWL 185
>YAAF_BACSU (P37529) Hypothetical protein yaaF| Length = 217 Score = 55.8 bits (133), Expect = 9e-08 Identities = 34/137 (24%), Positives = 66/137 (48%), Gaps = 3/137 (2%) Frame = +1 Query: 79 DHFNILDAFYAEPQRYAYTFQNYVFVTRVMQER---ESSSGIKPLRLMERSVFSDRMVFV 249 DH L+ FY + +R+++ Q Y R +++ E+ G + +RS++ D +F Sbjct: 43 DHNPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGF----VQDRSIYEDTGIFA 98 Query: 250 RAVHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEEGG 429 + + M++++ Y S F+ +V + PD IYL + R+ R R E Sbjct: 99 KMHADKGTMSKVDYKTYTSLFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQ 158 Query: 430 VSLDYLQGLHEKHESWL 480 S Y + +H ++E+W+ Sbjct: 159 TSRSYWEEMHTRYENWI 175
>DGK2_LACAC (Q59484) Deoxyguanosine kinase (EC 2.7.1.113) (DGUO kinase) (DGK)| (Deoxynucleoside kinase complex I F-component) Length = 227 Score = 42.7 bits (99), Expect = 8e-04 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 6/135 (4%) Frame = +1 Query: 91 ILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLMERSVFSDRMVFVRAVHEAK 270 +L FYA+P++YA+ Q Y TR + + + + +++RS++ D + F + Sbjct: 38 VLPLFYADPKKYAFLLQVYFLNTRFHSIKNALT--QDNNVLDRSIYEDALFFQMNADIGR 95 Query: 271 WMNEMEISIYDSWFDPV--VSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEE----GGV 432 +E + Y+ + + + +P PD +++ S DT KR+ R R E Sbjct: 96 ATSEEVDTYYELLHNMMGELDRMPKKNPDLLVHINVSYDTMIKRIKKRGRPYEQLSYDST 155 Query: 433 SLDYLQGLHEKHESW 477 DY + L ++ W Sbjct: 156 LEDYYKRLLRYYKPW 170
>NDUAA_HUMAN (O95299) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 10, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 42 kDa subunit) (Complex I-42KD) (CI-42KD) Length = 355 Score = 37.7 bits (86), Expect = 0.024 Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 6/149 (4%) Frame = +1 Query: 94 LDAFYAEPQRY---AYTFQNYVFVTRVMQERESSSGIKPLR---LMERSVFSDRMVFVRA 255 L+ FY +P+ +Y Q++++ +R++Q ++ + ++ERS+FSD VF+ A Sbjct: 114 LEKFYDDPRSNDGNSYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSD-FVFLEA 172 Query: 256 VHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVS 435 ++ ++ + + Y+ + L P IY+ +R+ + E ++ Sbjct: 173 MYNQGFIRKQCVDHYNEVKSVTICDY--LPPHLVIYIDVPVPEVQRRIQKKGDPHEMKIT 230 Query: 436 LDYLQGLHEKHESWLLPSKGQGSGLLSVS 522 YLQ + ++ LP + +L S Sbjct: 231 SAYLQDIENAYKKTFLPEMSEKCEVLQYS 259
>NDUAA_PONPY (Q5R9E8) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 10, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 42 kDa subunit) (Complex I-42KD) (CI-42KD) Length = 355 Score = 36.6 bits (83), Expect = 0.055 Identities = 31/149 (20%), Positives = 67/149 (44%), Gaps = 6/149 (4%) Frame = +1 Query: 94 LDAFYAEPQRY---AYTFQNYVFVTRVMQERESSSGIKPLR---LMERSVFSDRMVFVRA 255 L+ FY +P+ Y Q++++ +R++Q ++ + ++ERS+FSD VF+ A Sbjct: 114 LEKFYDDPRSNDGNTYRLQSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSD-FVFLDA 172 Query: 256 VHEAKWMNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVS 435 ++ ++ + + Y+ + L P IY+ +R+ + E ++ Sbjct: 173 MYNQGFIRKQCVDHYNEVKSVTICDY--LPPHLVIYIDVPVPEVQRRIQKKGDPHEMKIT 230 Query: 436 LDYLQGLHEKHESWLLPSKGQGSGLLSVS 522 YLQ + ++ LP + +L S Sbjct: 231 SAYLQDIENAYKKTFLPEMSEKCEVLQYS 259
>NDUAA_MOUSE (Q99LC3) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit| 10, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 42 kDa subunit) (Complex I-42KD) (CI-42KD) Length = 355 Score = 36.2 bits (82), Expect = 0.071 Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 7/142 (4%) Frame = +1 Query: 94 LDAFYAEPQRY---AYTFQNYVFVTRVMQERESSSGIKPLR---LMERSVFSDRMVFVRA 255 L+ FY +P+ +Y Q++++ +R++Q ++ + ++ERS++SD VF+ A Sbjct: 114 LEKFYDDPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSD-FVFLEA 172 Query: 256 VHEAKWMNEMEISIYDSWFDPVVSSLPGLIPD-GFIYLRASPDTCHKRMMVRKRSEEGGV 432 ++ ++ + + Y+ + +LP +P IY+ R+ + E V Sbjct: 173 MYNQGYIRKQCVDHYN---EIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHEMKV 229 Query: 433 SLDYLQGLHEKHESWLLPSKGQ 498 + YLQ + ++ LP + Sbjct: 230 TSAYLQDIENAYKKTFLPKMSE 251
>KITH_EBV (P03177) Thymidine kinase (EC 2.7.1.21)| Length = 607 Score = 33.9 bits (76), Expect = 0.35 Identities = 35/170 (20%), Positives = 72/170 (42%), Gaps = 17/170 (10%) Frame = +1 Query: 25 DLVEIVPEPVAKWQDIGPD-----HFNILDAFYAEPQRYAYTF---QNYVFVTRVMQERE 180 DL +VPEP+ W + + H N+ A + A + RV+ R+ Sbjct: 310 DLTIVVPEPMRYWTHVYENAIKAMHKNVTRARHGREDTSAEVLACQMKFTTPFRVLASRK 369 Query: 181 SS-----SGIKPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPGLI 345 S SG + + ++ + DR + +V + ++ Y S F V+++ Sbjct: 370 RSLLVTESGARSVAPLDCWILHDRHLLSASVVFPLMLLRSQLLSY-SDFIQVLATFTADP 428 Query: 346 PDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHE----SWLL 483 D ++++ + + +R+ R R E G+ YL+ +++ + +WLL Sbjct: 429 GDTIVWMKLNVEENMRRLKKRGRKHESGLDAGYLKSVNDAYHAVYCAWLL 478
>YAAG_BACSU (P37530) Hypothetical protein yaaG| Length = 207 Score = 33.1 bits (74), Expect = 0.60 Identities = 26/126 (20%), Positives = 53/126 (42%) Frame = +1 Query: 94 LDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLMERSVFSDRMVFVRAVHEAKW 273 LD FY + +++ + + R Q ++S + V +D ++ + + Sbjct: 43 LDKFYDNIKEWSFQLEMFFLCHRYKQLEDTSDHFLK---KGQPVIADYHIYKNVIFAERT 99 Query: 274 MNEMEISIYDSWFDPVVSSLPGLIPDGFIYLRASPDTCHKRMMVRKRSEEGGVSLDYLQG 453 ++ ++ Y + + LP P+ IY++AS T R+ R R E + YL+ Sbjct: 100 LSPHQLEKYKKIYHLLTDDLPK--PNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQ 157 Query: 454 LHEKHE 471 L +E Sbjct: 158 LISDYE 163
>DPB2_KLULA (Q6CPH8) DNA polymerase epsilon subunit B (EC 2.7.7.7) (DNA| polymerase II subunit B) Length = 710 Score = 33.1 bits (74), Expect = 0.60 Identities = 35/164 (21%), Positives = 69/164 (42%), Gaps = 25/164 (15%) Frame = +1 Query: 79 DHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERESSSGIKPLRL----MERSVFSDRMVF 246 D+F ++DAF + Y +T + Y++V R + ++ I L+L + S+F+ R Sbjct: 183 DYFKVIDAFNQQTFTYDHTKRQYIYVPRPKEVEKNMLSIAKLKLPNVESKVSLFTTRYHI 242 Query: 247 VR--------------------AVHEAKWMNEMEISIYDSWFDPVVSSLPGLI-PDGFIY 363 ++ + K MNE ++S +S ++ + L+ DG + Sbjct: 243 IKDKVLRNEKFQNNDIFNPLSSIIEMGKHMNESDVSPLNSASYMKITQIKNLLGHDGKNF 302 Query: 364 LRASPDTCHKRMMVRKRSEEGGVSLDYLQGLHEKHESWLLPSKG 495 L + + ++ +G SL+ G E H +P+KG Sbjct: 303 L---------LLGLLDQNSKGNWSLEDPSGSIELHLQQAIPTKG 337
>TYSY_PROAC (Q6A761) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 269 Score = 32.3 bits (72), Expect = 1.0 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 163 VMQERESSSGIKPLRLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFD 315 V RE + ++ RSVF + + F+R W+++ I I+D W D Sbjct: 35 VFDLREGFPLVTTKKIYTRSVFGELLWFLRGDTNVGWLHDNNIHIWDEWAD 85
>KTHY_PICTO (Q6L016) Probable thymidylate kinase (EC 2.7.4.9) (dTMP kinase)| Length = 202 Score = 31.2 bits (69), Expect = 2.3 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 4/111 (3%) Frame = +1 Query: 223 VFSDRMVFVRAVHEAKWMNEMEISIYD--SWFDPVVSSLPGLIPDGFIYLRASPDTCHKR 396 V SDR VF ++ M + ++ + SW V + ++PD IYL+ P KR Sbjct: 82 VISDRYVFSSIAYQGSGMEKRFKNMDETISWMLDVSRFI--IMPDLIIYLKIDPGIALKR 139 Query: 397 MMVRKRSEEGGVSLDYLQGLH--EKHESWLLPSKGQGSGLLSVSQLPIHME 543 + +RK ++ + + L+ L K+ ++ SG++ + + I+ E Sbjct: 140 LNLRKNEKKNTDAFERLEMLKNVSKYYDYIF------SGIIKIPVIKINAE 184
>TYSY_BUCAP (Q8K9C3) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 30.4 bits (67), Expect = 3.9 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +1 Query: 220 SVFSDRMVFVRAVHEAKWMNEMEISIYDSWFD 315 S+ + + F+R K++NE +ISI+D+W D Sbjct: 54 SIIHELLWFLRGETNIKYLNENKISIWDNWAD 85
>TYSY_AZOSE (Q5P233) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 30.0 bits (66), Expect = 5.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 205 RLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFD 315 +L RS+ + + F+R +++NE +SI+D W D Sbjct: 49 KLHTRSIIHELLWFLRGDTNIRYLNENGVSIWDDWAD 85
>ROBO4_HUMAN (Q8WZ75) Roundabout homolog 4 precursor (Magic roundabout)| Length = 1007 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 Query: 580 RTLDLVFLDVVSPPCELEAD*LTTNQSLVLWK 485 R D VF+D SPP + LT N SL LW+ Sbjct: 924 READCVFIDASSPPSPRDEIFLTPNLSLPLWE 955
>TYSY_BDEBA (Q6MID2) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.6 bits (65), Expect = 6.7 Identities = 10/37 (27%), Positives = 24/37 (64%) Frame = +1 Query: 205 RLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFD 315 +L RS+F + + F++ K++++ +++I+D W D Sbjct: 49 KLHTRSIFHELLWFLKGETNIKYLHDNKVTIWDEWAD 85
>PSD_HAEIN (P43789) Phosphatidylserine decarboxylase proenzyme (EC 4.1.1.65)| [Contains: Phosphatidylserine decarboxylase alpha chain; Phosphatidylserine decarboxylase beta chain] Length = 290 Score = 29.6 bits (65), Expect = 6.7 Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 7/93 (7%) Frame = +1 Query: 82 HFNILDAFYAEPQRYAYTFQNYVFVTRVMQERE-------SSSGIKPLRLMERSVFSDRM 240 HF L+ AE + TF+N FVT + R+ + ++ + + +FS Sbjct: 116 HFFSLEDLLAEDKELVETFKNGEFVTTYLSPRDYHRVHMPCDATLRKMIYVPGDLFSVNP 175 Query: 241 VFVRAVHEAKWMNEMEISIYDSWFDPVVSSLPG 339 + V NE I ++D+ F +V L G Sbjct: 176 FLAQHVPNLFARNERVICVFDTEFGTMVQILVG 208
>LNT1_LEPIN (Q8F724) Apolipoprotein N-acyltransferase 1 (EC 2.3.1.-) (ALP| N-acyltransferase 1) Length = 576 Score = 29.6 bits (65), Expect = 6.7 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = +1 Query: 112 EPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLMERSVFSDRMVFVRAVHEAKWMNEMEI 291 EP+ Y Y F + V T ++ E S I PL L ++F++ V + + E+ I Sbjct: 414 EPKTYRYEFSSIVEHTNKIRNLEYSYSILPL-LCYEAMFTE---LVLDYFQNEQKPEVLI 469 Query: 292 SI-YDSWFDPVVSSLPGLIPDGFIYLRA 372 +I DSWFD S L G + LRA Sbjct: 470 NITNDSWFD---SELEAYQHSGAVRLRA 494
>LNT1_LEPIC (Q72PB6) Apolipoprotein N-acyltransferase 1 (EC 2.3.1.-) (ALP| N-acyltransferase 1) Length = 576 Score = 29.6 bits (65), Expect = 6.7 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%) Frame = +1 Query: 112 EPQRYAYTFQNYVFVTRVMQERESSSGIKPLRLMERSVFSDRMVFVRAVHEAKWMNEMEI 291 EP+ Y Y F + V T ++ E S I PL L ++F++ V + + E+ I Sbjct: 414 EPKTYRYEFSSIVEHTNKIRNLEYSYSILPL-LCYEAMFTE---LVLDYFQNEQKPEVLI 469 Query: 292 SI-YDSWFDPVVSSLPGLIPDGFIYLRA 372 +I DSWFD S L G + LRA Sbjct: 470 NITNDSWFD---SELEAYQHSGAVRLRA 494
>YAS2_SCHPO (Q10138) Hypothetical protein C3H8.02 in chromosome I| Length = 444 Score = 29.3 bits (64), Expect = 8.7 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 256 VHEAKWMNEMEISIYDSWFDPVVSS 330 VH+A W+ + SI SW DPVV S Sbjct: 274 VHKAPWLFQGVWSIIKSWLDPVVVS 298
>TYSY_BARQU (Q6FZ91) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)| Length = 264 Score = 29.3 bits (64), Expect = 8.7 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +1 Query: 205 RLMERSVFSDRMVFVRAVHEAKWMNEMEISIYDSWFD 315 +L RS+ + + F+R W+ E +SI+D W D Sbjct: 49 KLHLRSIIYELLWFLRGDTNVAWLKEHGVSIWDEWAD 85
>EZRA_STRP8 (Q8P1M3) Septation ring formation regulator ezrA| Length = 574 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +1 Query: 10 TIELRDLVEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERES 183 TI L + E +P VAK +D PD + L+ Y Y F R + RES Sbjct: 210 TIALGQITEQIPAIVAKLEDDFPDQLDDLETGYRRLLEENYHFPEKNIEARFQEIRES 267
>EZRA_STRP6 (Q5XD04) Septation ring formation regulator ezrA| Length = 574 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +1 Query: 10 TIELRDLVEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERES 183 TI L + E +P VAK +D PD + L+ Y Y F R + RES Sbjct: 210 TIALGQITEQIPAIVAKLEDDFPDQLDDLETGYRRLLEENYHFPEKNIEARFQEIRES 267
>EZRA_STRP3 (Q8K839) Septation ring formation regulator ezrA| Length = 574 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +1 Query: 10 TIELRDLVEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERES 183 TI L + E +P VAK +D PD + L+ Y Y F R + RES Sbjct: 210 TIALGQITEQIPAIVAKLEDDFPDQLDDLETGYRRLLEENYHFPEKNIEARFQEIRES 267
>EZRA_STRP1 (Q9A0K9) Septation ring formation regulator ezrA| Length = 574 Score = 29.3 bits (64), Expect = 8.7 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +1 Query: 10 TIELRDLVEIVPEPVAKWQDIGPDHFNILDAFYAEPQRYAYTFQNYVFVTRVMQERES 183 TI L + E +P VAK +D PD + L+ Y Y F R + RES Sbjct: 210 TIALGQITEQIPAIVAKLEDDFPDQLDDLETGYRRLLEENYHFPEKNIEARFQEIRES 267 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,442,996 Number of Sequences: 219361 Number of extensions: 1846456 Number of successful extensions: 4256 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4229 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
