Clone Name | bah62m10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK101275.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033B15, full insert sequence Length = 3103 Score = 587 bits (296), Expect = e-164 Identities = 476/536 (88%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 797 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 856 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 857 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcttac 916 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 917 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 976 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggtttttgtccgt 252 |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 977 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggtttttgttcgt 1036 Query: 253 gctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgactcctggttc 312 ||||| |||||||| || ||||||||||||||||| |||||||| || ||||||||||| Sbjct: 1037 gctgtccatgaagccaactggatgaacgagatggagatcagcatctatgactcctggttt 1096 Query: 313 gacccagttgtgtcatctctcccgggtcttatccctgatggttttatttatctaagagct 372 |||||||| |||||||| ||||| || ||||| || |||||||||||||||||||||||| Sbjct: 1097 gacccagtggtgtcatcactcccaggacttattccagatggttttatttatctaagagct 1156 Query: 373 agccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggagggtggtgtc 432 || || || || ||||||||||||||||||||||||||||| || || ||||||||||| Sbjct: 1157 agtcccgacacttgccacaaaagaatgatggttcggaaaagatctgaagagggtggtgtt 1216 Query: 433 agccttgattaccttcaaggtttgcatgagaaacatgaaagctggctacttccttccaaa 492 | ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 1217 actcttgattaccttcgaggtttgcatgagaaacatgagagctggctgcttccttccaaa 1276 Query: 493 ggacaaggctctggtttgttgtcagtcagtcagcttccaattcacatggagggctc 548 |||||||| ||||| | || || |||||||| ||||| | || ||||||||||| Sbjct: 1277 ggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatggagggctc 1332
>ref|XM_475270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 490 bits (247), Expect = e-135 Identities = 448/515 (86%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||||| ||||| ||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 208 atcgaactgcgtgatcttgtagaaatagtgcctgaacctgttgctaagtggcaggatatt 267 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||| ||||| || ||| | ||||||||||||||||| ||||| |||||||| || Sbjct: 268 ggccctgaccacttcaatatattggatgctttctatgctgagccacataggtatgcctat 327 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 || || || ||||| || |||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 328 acctttcaaaattatgtgtttgtgacaagggtcatgcaagaaagggaatcttcaggtgga 387 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggtttttgtccgt 252 ||||| |||||| | ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 388 ataaaacctctcagactgatggaaagaagtgttttcagtgataggatggtatttgttcgt 447 Query: 253 gctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgactcctggttc 312 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 448 gctgttcatgaagctaactggatgaatgagatggagatcagcatttacgactcatggttt 507 Query: 313 gacccagttgtgtcatctctcccgggtcttatccctgatggttttatttatctaagagct 372 || || ||||||||||| || || ||||||||||||||||| ||||| |||||||||||| Sbjct: 508 gatcctgttgtgtcatcgcttccaggtcttatccctgatggatttatctatctaagagct 567 Query: 373 agccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggagggtggtgtc 432 ||||| ||||| |||||||||||||||||| | |||||||| ||||||| |||||||| Sbjct: 568 agcccagatacttgccacaaaagaatgatgctccggaaaagagcagaggaaggtggtgtt 627 Query: 433 agccttgattaccttcaaggtttgcatgagaaacatgaaagctggctacttccttccaaa 492 | ||||| ||| | |||||||||||||||||||| || |||||| | |||||||| ||| Sbjct: 628 actcttgactacttgcaaggtttgcatgagaaacacgagagctggttgcttccttcaaaa 687 Query: 493 ggacaaggctctggtttgttgtcagtcagtcagct 527 ||| ||| ||||| |||| || ||||||||||| Sbjct: 688 ggaggaggtactggtgtgttatctgtcagtcagct 722
>dbj|AK071740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108J12, full insert sequence Length = 1741 Score = 490 bits (247), Expect = e-135 Identities = 448/515 (86%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||||| ||||| ||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 544 atcgaactgcgtgatcttgtagaaatagtgcctgaacctgttgctaagtggcaggatatt 603 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||| ||||| || ||| | ||||||||||||||||| ||||| |||||||| || Sbjct: 604 ggccctgaccacttcaatatattggatgctttctatgctgagccacataggtatgcctat 663 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 || || || ||||| || |||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 664 acctttcaaaattatgtgtttgtgacaagggtcatgcaagaaagggaatcttcaggtgga 723 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggtttttgtccgt 252 ||||| |||||| | ||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 724 ataaaacctctcagactgatggaaagaagtgttttcagtgataggatggtatttgttcgt 783 Query: 253 gctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgactcctggttc 312 ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 784 gctgttcatgaagctaactggatgaatgagatggagatcagcatttacgactcatggttt 843 Query: 313 gacccagttgtgtcatctctcccgggtcttatccctgatggttttatttatctaagagct 372 || || ||||||||||| || || ||||||||||||||||| ||||| |||||||||||| Sbjct: 844 gatcctgttgtgtcatcgcttccaggtcttatccctgatggatttatctatctaagagct 903 Query: 373 agccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggagggtggtgtc 432 ||||| ||||| |||||||||||||||||| | |||||||| ||||||| |||||||| Sbjct: 904 agcccagatacttgccacaaaagaatgatgctccggaaaagagcagaggaaggtggtgtt 963 Query: 433 agccttgattaccttcaaggtttgcatgagaaacatgaaagctggctacttccttccaaa 492 | ||||| ||| | |||||||||||||||||||| || |||||| | |||||||| ||| Sbjct: 964 actcttgactacttgcaaggtttgcatgagaaacacgagagctggttgcttccttcaaaa 1023 Query: 493 ggacaaggctctggtttgttgtcagtcagtcagct 527 ||| ||| ||||| |||| || ||||||||||| Sbjct: 1024 ggaggaggtactggtgtgttatctgtcagtcagct 1058
>gb|AY105819.1| Zea mays PCO069666 mRNA sequence Length = 1210 Score = 472 bits (238), Expect = e-130 Identities = 376/422 (89%) Strand = Plus / Plus Query: 10 actatcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggat 69 ||||||||||||||||||||||| ||||| |||||||||||| |||| || ||||||||| Sbjct: 787 actatcgaactacgtgaccttgtagaaattgtacctgaacctattgctaagtggcaggat 846 Query: 70 attgggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgca 129 |||| || || ||||| || ||||||||||||||||||| || ||||||||||||||| Sbjct: 847 gttggccccgaacacttcaatgtacttgatgctttctatgcagagccacagaggtatgca 906 Query: 130 tacactttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagt 189 ||||| ||||||||||| || |||||||||||||| |||||||| | ||| ||| | || Sbjct: 907 tacaccttccagaattatgtatttgtgacaagggtcatgcaagagaaggaatctgcgtgt 966 Query: 190 ggaataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggtttttgtc 249 |||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 967 ggaataaaacctcttaggctgatggaaagaagcgttttcagtgatcgaatggtttttgtt 1026 Query: 250 cgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgactcctgg 309 |||||||| |||||||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 1027 cgtgctgtgcatgaagcaaactggatgaacgagatggaaatcagcatttatgactcttgg 1086 Query: 310 ttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttatttatctaaga 369 || ||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||| Sbjct: 1087 tttgacccagttgtgtcatcactcccaggtcttgtacctgatggttttatttatctaaga 1146 Query: 370 gctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggagggtggt 429 |||||||||||||| || ||||||||||||||||| || ||||| |||||||||| |||| Sbjct: 1147 gctagccctgatacttgtcacaaaagaatgatggtgcgaaaaagatcagaggaggctggt 1206 Query: 430 gt 431 || Sbjct: 1207 gt 1208
>dbj|AK059420.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D11, full insert sequence Length = 1235 Score = 470 bits (237), Expect = e-129 Identities = 438/505 (86%) Strand = Plus / Plus Query: 23 gtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatattgggcctgatc 82 |||| ||||| |||||||| |||||||||||||| || |||||||||||||| ||||| | Sbjct: 9 gtgatcttgtagaaatagtgcctgaacctgttgctaagtggcaggatattggccctgacc 68 Query: 83 actttaacatacttgatgctttctatgctgaaccacagaggtatgcatacactttccaga 142 ||| || ||| | ||||||||||||||||| ||||| |||||||| || || || || | Sbjct: 69 actccaatatattggatgctttctatgctgagccacataggtatgcctatacctttcaaa 128 Query: 143 attacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtggaataaagcctc 202 |||| || |||||||||||||| |||||||||||||| |||||| |||||||||| |||| Sbjct: 129 attatgtgtttgtgacaagggtcatgcaagaaagggaatcttcaggtggaataaaacctc 188 Query: 203 tccggctgatggaaagaagtgttttcagtgatagaatggtttttgtccgtgctgttcatg 262 || | ||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct: 189 tcagactgatggaaagaagtgttttcagtgataggatggtatttgttcgtgctgttcatg 248 Query: 263 aagctaagtggatgaacgagatggaaatcagcatttacgactcctggttcgacccagttg 322 ||||||| |||||||| |||||||| ||||||||||||||||| ||||| || || |||| Sbjct: 249 aagctaactggatgaatgagatggagatcagcatttacgactcatggtttgatcctgttg 308 Query: 323 tgtcatctctcccgggtcttatccctgatggttttatttatctaagagctagccctgata 382 ||||||| || || ||||||||||||||||| ||||| ||||||||||||||||| |||| Sbjct: 309 tgtcatcgcttccaggtcttatccctgatggatttatctatctaagagctagcccagata 368 Query: 383 cctgccacaaaagaatgatggttcggaaaaggtcagaggagggtggtgtcagccttgatt 442 | |||||||||||||||||| | |||||||| ||||||| |||||||| | ||||| | Sbjct: 369 cttgccacaaaagaatgatgctccggaaaagagcagaggaaggtggtgttactcttgact 428 Query: 443 accttcaaggtttgcatgagaaacatgaaagctggctacttccttccaaaggacaaggct 502 || | |||||||||||||||||||| || |||||| | |||||||| |||||| ||| Sbjct: 429 acttgcaaggtttgcatgagaaacacgagagctggttgcttccttcaaaaggaggaggta 488 Query: 503 ctggtttgttgtcagtcagtcagct 527 ||||| |||| || ||||||||||| Sbjct: 489 ctggtgtgttatctgtcagtcagct 513
>ref|NM_190823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 903 Score = 311 bits (157), Expect = 1e-81 Identities = 271/309 (87%) Strand = Plus / Plus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct: 453 ggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatcta 512 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||||||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 513 tgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttat 572 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcaga 419 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 573 ttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctga 632 Query: 420 ggagggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggct 479 ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 633 agagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggct 692 Query: 480 acttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacat 539 |||||||||||||||||||| ||||| | || || |||||||| ||||| | || || Sbjct: 693 gcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatat 752 Query: 540 ggagggctc 548 ||||||||| Sbjct: 753 ggagggctc 761 Score = 289 bits (146), Expect = 5e-75 Identities = 209/230 (90%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 208 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 267 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 268 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 327 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 328 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 387 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 |||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 388 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggt 437
>gb|AY459335.1| Oryza sativa (japonica cultivar-group) clone CL026180.5 R2R3-MYB gene region Length = 24910 Score = 311 bits (157), Expect = 1e-81 Identities = 271/309 (87%) Strand = Plus / Minus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct: 5646 ggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatcta 5587 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||||||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 5586 tgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttat 5527 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcaga 419 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 5526 ttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctga 5467 Query: 420 ggagggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggct 479 ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 5466 agagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggct 5407 Query: 480 acttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacat 539 |||||||||||||||||||| ||||| | || || |||||||| ||||| | || || Sbjct: 5406 gcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatat 5347 Query: 540 ggagggctc 548 ||||||||| Sbjct: 5346 ggagggctc 5338 Score = 289 bits (146), Expect = 5e-75 Identities = 209/230 (90%) Strand = Plus / Minus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 6001 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 5942 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 5941 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 5882 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 5881 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 5822 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 |||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 5821 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggt 5772
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 311 bits (157), Expect = 1e-81 Identities = 271/309 (87%) Strand = Plus / Minus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct: 37910187 ggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatcta 37910128 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||||||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 37910127 tgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttat 37910068 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcaga 419 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 37910067 ttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctga 37910008 Query: 420 ggagggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggct 479 ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 37910007 agagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggct 37909948 Query: 480 acttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacat 539 |||||||||||||||||||| ||||| | || || |||||||| ||||| | || || Sbjct: 37909947 gcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatat 37909888 Query: 540 ggagggctc 548 ||||||||| Sbjct: 37909887 ggagggctc 37909879 Score = 289 bits (146), Expect = 5e-75 Identities = 209/230 (90%) Strand = Plus / Minus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 37910542 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 37910483 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 37910482 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 37910423 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 37910422 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 37910363 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 |||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 37910362 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggt 37910313
>dbj|AP004669.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0491F11 Length = 152274 Score = 311 bits (157), Expect = 1e-81 Identities = 271/309 (87%) Strand = Plus / Minus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct: 131543 ggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatcta 131484 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||||||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 131483 tgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttat 131424 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcaga 419 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 131423 ttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctga 131364 Query: 420 ggagggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggct 479 ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 131363 agagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggct 131304 Query: 480 acttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacat 539 |||||||||||||||||||| ||||| | || || |||||||| ||||| | || || Sbjct: 131303 gcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatat 131244 Query: 540 ggagggctc 548 ||||||||| Sbjct: 131243 ggagggctc 131235 Score = 289 bits (146), Expect = 5e-75 Identities = 209/230 (90%) Strand = Plus / Minus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 131898 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 131839 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131838 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 131779 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 131778 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 131719 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 |||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 131718 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggt 131669
>dbj|AP003922.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0648C09 Length = 107522 Score = 311 bits (157), Expect = 1e-81 Identities = 271/309 (87%) Strand = Plus / Minus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| |||||||| |||||||| || ||||||||||||||||| |||||||| || Sbjct: 6463 ggtttttgttcgtgctgtccatgaagccaactggatgaacgagatggagatcagcatcta 6404 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||||||||| |||||||| |||||||| ||||| || ||||| || ||||||||||| Sbjct: 6403 tgactcctggtttgacccagtggtgtcatcactcccaggacttattccagatggttttat 6344 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcaga 419 ||||||||||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 6343 ttatctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctga 6284 Query: 420 ggagggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggct 479 ||||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 6283 agagggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggct 6224 Query: 480 acttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacat 539 |||||||||||||||||||| ||||| | || || |||||||| ||||| | || || Sbjct: 6223 gcttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatat 6164 Query: 540 ggagggctc 548 ||||||||| Sbjct: 6163 ggagggctc 6155 Score = 289 bits (146), Expect = 5e-75 Identities = 209/230 (90%) Strand = Plus / Minus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 6818 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 6759 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 6758 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 6699 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 |||||||||||||| || ||||| |||||||| |||||||| | ||| ||||||||||| Sbjct: 6698 actttccagaattatgtgtttgttacaagggtcatgcaagagaaggaatcttcaagtggc 6639 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 |||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 6638 ataaagcctctcaggttgatggaaagaagtgttttcagtgatagaatggt 6589
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 262 bits (132), Expect = 1e-66 Identities = 246/284 (86%) Strand = Plus / Plus Query: 244 tttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgac 303 ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 98596 tttgttcgtgctgttcatgaagctaactggatgaatgagatggagatcagcatttacgac 98655 Query: 304 tcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttatttat 363 || ||||| || || ||||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 98656 tcatggtttgatcctgttgtgtcatcgcttccaggtcttatccctgatggatttatctat 98715 Query: 364 ctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggag 423 |||||||||||||| ||||| |||||||||||||||||| | |||||||| ||||||| Sbjct: 98716 ctaagagctagcccagatacttgccacaaaagaatgatgctccggaaaagagcagaggaa 98775 Query: 424 ggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggctactt 483 |||||||| | ||||| ||| | |||||||||||||||||||| || |||||| | ||| Sbjct: 98776 ggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttgctt 98835 Query: 484 ccttccaaaggacaaggctctggtttgttgtcagtcagtcagct 527 ||||| |||||| ||| ||||| |||| || ||||||||||| Sbjct: 98836 ccttcaaaaggaggaggtactggtgtgttatctgtcagtcagct 98879 Score = 234 bits (118), Expect = 3e-58 Identities = 202/230 (87%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||||| ||||| ||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 98246 atcgaactgcgtgatcttgtagaaatagtgcctgaacctgttgctaagtggcaggatatt 98305 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||| ||||| || ||| | ||||||||||||||||| ||||| |||||||| || Sbjct: 98306 ggccctgaccacttcaatatattggatgctttctatgctgagccacataggtatgcctat 98365 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 || || || ||||| || |||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 98366 acctttcaaaattatgtgtttgtgacaagggtcatgcaagaaagggaatcttcaggtgga 98425 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 ||||| |||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 98426 ataaaacctctcagactgatggaaagaagtgttttcagtgataggatggt 98475
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 262 bits (132), Expect = 1e-66 Identities = 246/284 (86%) Strand = Plus / Plus Query: 244 tttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgac 303 ||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 20971818 tttgttcgtgctgttcatgaagctaactggatgaatgagatggagatcagcatttacgac 20971877 Query: 304 tcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttatttat 363 || ||||| || || ||||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 20971878 tcatggtttgatcctgttgtgtcatcgcttccaggtcttatccctgatggatttatctat 20971937 Query: 364 ctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcagaggag 423 |||||||||||||| ||||| |||||||||||||||||| | |||||||| ||||||| Sbjct: 20971938 ctaagagctagcccagatacttgccacaaaagaatgatgctccggaaaagagcagaggaa 20971997 Query: 424 ggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggctactt 483 |||||||| | ||||| ||| | |||||||||||||||||||| || |||||| | ||| Sbjct: 20971998 ggtggtgttactcttgactacttgcaaggtttgcatgagaaacacgagagctggttgctt 20972057 Query: 484 ccttccaaaggacaaggctctggtttgttgtcagtcagtcagct 527 ||||| |||||| ||| ||||| |||| || ||||||||||| Sbjct: 20972058 ccttcaaaaggaggaggtactggtgtgttatctgtcagtcagct 20972101 Score = 234 bits (118), Expect = 3e-58 Identities = 202/230 (87%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||||| ||||| ||||| |||||||| |||||||||||||| || |||||||||||| Sbjct: 20971468 atcgaactgcgtgatcttgtagaaatagtgcctgaacctgttgctaagtggcaggatatt 20971527 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||| ||||| || ||| | ||||||||||||||||| ||||| |||||||| || Sbjct: 20971528 ggccctgaccacttcaatatattggatgctttctatgctgagccacataggtatgcctat 20971587 Query: 133 actttccagaattacgtctttgtgacaagggtgatgcaagaaagggagtcttcaagtgga 192 || || || ||||| || |||||||||||||| |||||||||||||| |||||| ||||| Sbjct: 20971588 acctttcaaaattatgtgtttgtgacaagggtcatgcaagaaagggaatcttcaggtgga 20971647 Query: 193 ataaagcctctccggctgatggaaagaagtgttttcagtgatagaatggt 242 ||||| |||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 20971648 ataaaacctctcagactgatggaaagaagtgttttcagtgataggatggt 20971697
>gb|AF514776.1| Lycopersicon esculentum dCK/dGK-like deoxyribonucleoside kinase mRNA, complete cds Length = 1098 Score = 220 bits (111), Expect = 4e-54 Identities = 309/375 (82%) Strand = Plus / Plus Query: 28 cttgtggaaatagtacctgaacctgttgcaaaatggcaggatattgggcctgatcacttt 87 ||||| |||||||| || |||||| |||| || ||||||||||||||||| ||||||||| Sbjct: 232 cttgttgaaatagttcccgaacctattgccaagtggcaggatattgggccagatcacttt 291 Query: 88 aacatacttgatgctttctatgctgaaccacagaggtatgcatacactttccagaattac 147 |||||| | ||||| |||||||| |||||||| || ||||| ||||| || || || || Sbjct: 292 aacatattagatgcattctatgcggaaccacaaagatatgcttacacatttcaaaactat 351 Query: 148 gtctttgtgacaagggtgatgcaagaaagggagtcttcaagtggaataaagcctctccgg 207 || ||||| |||||||| ||||| || || || || || |||| || | ||| ||| || Sbjct: 352 gtttttgtaacaagggttatgcaggagagagaatcatctggtggtatcaggcccctcagg 411 Query: 208 ctgatggaaagaagtgttttcagtgatagaatggtttttgtccgtgctgttcatgaagct 267 ||||||| |||||||| |||||||| || ||||| ||||| | |||||||||||||| Sbjct: 412 ttgatggagagaagtgtgttcagtgacaggatggtctttgtgagagctgttcatgaagca 471 Query: 268 aagtggatgaacgagatggaaatcagcatttacgactcctggttcgacccagttgtgtca 327 || |||||||| |||||||| ||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct: 472 aactggatgaatgagatggagatcagcatttatgactcatggtttgacccggttgtttca 531 Query: 328 tctctcccgggtcttatccctgatggttttatttatctaagagctagccctgatacctgc 387 || | || || || || || ||||||||||||||||| ||||| |||||||| || || Sbjct: 532 actttgcctggactcattcccgatggttttatttatcttagagcaagccctgacacatgt 591 Query: 388 cacaaaagaatgatg 402 ||||| ||||||||| Sbjct: 592 cacaagagaatgatg 606 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 454 ttgcatgagaaacatgaaagctggct 479 ||||||||||| |||||||||||||| Sbjct: 658 ttgcatgagaagcatgaaagctggct 683
>dbj|AK105804.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B04, full insert sequence Length = 1783 Score = 180 bits (91), Expect = 3e-42 Identities = 163/187 (87%) Strand = Plus / Plus Query: 362 atctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcagagg 421 ||||||||||||| || || || ||||||||||||||||||||||||||||| || || | Sbjct: 994 atctaagagctagtcccgacacttgccacaaaagaatgatggttcggaaaagatctgaag 1053 Query: 422 agggtggtgtcagccttgattaccttcaaggtttgcatgagaaacatgaaagctggctac 481 |||||||||| | ||||||||||||| ||||||||||||||||||||| |||||||| | Sbjct: 1054 agggtggtgttactcttgattaccttcgaggtttgcatgagaaacatgagagctggctgc 1113 Query: 482 ttccttccaaaggacaaggctctggtttgttgtcagtcagtcagcttccaattcacatgg 541 ||||||||||||||||||| ||||| | || || |||||||| ||||| | || |||| Sbjct: 1114 ttccttccaaaggacaaggtcctggtgtattatcggtcagtcaagttccagtccatatgg 1173 Query: 542 agggctc 548 ||||||| Sbjct: 1174 agggctc 1180 Score = 180 bits (91), Expect = 3e-42 Identities = 130/143 (90%) Strand = Plus / Plus Query: 13 atcgaactacgtgaccttgtggaaatagtacctgaacctgttgcaaaatggcaggatatt 72 |||||| ||||||||||||| || ||||| ||||||||| |||| |||||||| ||| || Sbjct: 849 atcgaattacgtgaccttgtagagatagtgcctgaacctattgctaaatggcaagatgtt 908 Query: 73 gggcctgatcactttaacatacttgatgctttctatgctgaaccacagaggtatgcatac 132 || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 909 ggccctgatcacttcaacatacttgatgctttctatgctgagccacagaggtatgcatac 968 Query: 133 actttccagaattacgtctttgt 155 |||||||||||||| || ||||| Sbjct: 969 actttccagaattatgtgtttgt 991
>gb|AY194363.1| Vitis vinifera putative deoxyguanosine kinase (Dgk) mRNA, partial cds Length = 331 Score = 163 bits (82), Expect = 8e-37 Identities = 268/330 (81%) Strand = Plus / Plus Query: 61 tggcaggatattgggcctgatcactttaacatacttgatgctttctatgctgaaccacag 120 ||||||||| |||| |||||||||||||| ||| | ||||| || |||||||| ||||| Sbjct: 2 tggcaggatgttggacctgatcactttaatatattggatgcattttatgctgagccacaa 61 Query: 121 aggtatgcatacactttccagaattacgtctttgtgacaagggtgatgcaagaaagggag 180 ||||||| || || || ||||||||||| ||||| || || || ||||| || || ||| Sbjct: 62 cggtatgcctatacctttcagaattacgtgtttgttaccagagttatgcaggagagagag 121 Query: 181 tcttcaagtggaataaagcctctccggctgatggaaagaagtgttttcagtgatagaatg 240 || || ||||| | |||||||| || ||||||| || |||||||||||||| || ||| Sbjct: 122 tcatctggtggagttaagcctctgaggttgatggagaggagtgttttcagtgacaggatg 181 Query: 241 gtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttac 300 || ||||| || |||||||||||||| || |||||||| |||||||| ||||||||||| Sbjct: 182 gtatttgtacgagctgttcatgaagcaaactggatgaatgagatggagatcagcatttat 241 Query: 301 gactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttatt 360 ||||| ||||| || || || || |||| | || || || || |||||||| || || Sbjct: 242 gactcatggtttgatcccgtagtttcatgcttgcctgggctgattcctgatggcttcatc 301 Query: 361 tatctaagagctagccctgatacctgccac 390 ||||| ||||| | |||||||||||||||| Sbjct: 302 tatcttagagcaacccctgatacctgccac 331
>dbj|AK131259.1| Homo sapiens cDNA FLJ16191 fis, clone BRTHA2013610, moderately similar to Arabidopsis thaliana deoxyguanosine kinase -related (At1g72040) mRNA Length = 1807 Score = 159 bits (80), Expect = 1e-35 Identities = 305/380 (80%) Strand = Plus / Plus Query: 61 tggcaggatattgggcctgatcactttaacatacttgatgctttctatgctgaaccacag 120 ||||||||| |||| ||||||||||||||||| | |||||||| ||||| || || || Sbjct: 779 tggcaggatgttggacctgatcactttaacattttggatgctttttatgccgagccgcaa 838 Query: 121 aggtatgcatacactttccagaattacgtctttgtgacaagggtgatgcaagaaagggag 180 ||||||| ||||| || ||||| || || ||||| ||| |||| ||||| ||||| ||| Sbjct: 839 cggtatgcctacacctttcagaactatgtgtttgtcacacgggtcatgcaggaaagagag 898 Query: 181 tcttcaagtggaataaagcctctccggctgatggaaagaagtgttttcagtgatagaatg 240 || || |||||| |||||||| || ||||||| || |||||||||||||| || ||| Sbjct: 899 tcatctgctggaatcaagcctcttcgtttgatggagaggagtgttttcagtgacaggatg 958 Query: 241 gtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttac 300 |||||||| || ||||| ||||||||||| |||||||| | |||||| ||||| || || Sbjct: 959 gtttttgtacgagctgtccatgaagctaactggatgaatgggatggagatcagtatctat 1018 Query: 301 gactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttatt 360 ||||| ||||| || || || || || || | || || ||||| |||||||||||||| Sbjct: 1019 gactcgtggtttgatcctgtagtatcctccttgcctggacttattcctgatggttttatc 1078 Query: 361 tatctaagagctagccctgatacctgccacaaaagaatgatggttcggaaaaggtcagag 420 ||||| || || || ||||| || ||||| || ||||||||| | | ||||| |||| Sbjct: 1079 tatcttagggcaagtcctgacacttgccataagagaatgatgttaagaaaaagaacagaa 1138 Query: 421 gagggtggtgtcagccttga 440 || ||||| ||||||||||| Sbjct: 1139 gaaggtggagtcagccttga 1158
>emb|CT009492.5| M.truncatula DNA sequence from clone MTH2-93A21 on chromosome 3, complete sequence Length = 122557 Score = 131 bits (66), Expect = 3e-27 Identities = 153/182 (84%) Strand = Plus / Minus Query: 61 tggcaggatattgggcctgatcactttaacatacttgatgctttctatgctgaaccacag 120 ||||||||| |||| ||||| ||||| || || || |||||||| |||||||| |||||| Sbjct: 73220 tggcaggatgttggacctgaccacttcaatatcctcgatgctttttatgctgagccacag 73161 Query: 121 aggtatgcatacactttccagaattacgtctttgtgacaagggtgatgcaagaaagggag 180 |||||||||||||| || ||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct: 73160 aggtatgcatacacctttcagaactacgtatttgttactagggtgatgcaggaaagagag 73101 Query: 181 tcttcaagtggaataaagcctctccggctgatggaaagaagtgttttcagtgatagaatg 240 ||||| ||| || |||||||| || ||||||| || |||||||||||||| || ||| Sbjct: 73100 tcttctgctggcatcaagcctcttcgattgatggagaggagtgttttcagtgacaggatg 73041 Query: 241 gt 242 || Sbjct: 73040 gt 73039 Score = 105 bits (53), Expect = 2e-19 Identities = 134/161 (83%) Strand = Plus / Minus Query: 240 ggtttttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcattta 299 ||||||||| || |||||||||||||| || |||||||| |||||||| || |||||||| Sbjct: 72782 ggtttttgtacgagctgttcatgaagccaattggatgaatgagatggagataagcattta 72723 Query: 300 cgactcctggttcgacccagttgtgtcatctctcccgggtcttatccctgatggttttat 359 ||||| ||||| || || |||||||| | | || || ||||| |||||||||||||| Sbjct: 72722 tgactcttggtttgatcctgttgtgtctaccttgcctggccttattcctgatggttttat 72663 Query: 360 ttatctaagagctagccctgatacctgccacaaaagaatga 400 ||||| ||||| || |||||||| ||||| ||||||||| Sbjct: 72662 ctatctcagagcaagtcctgatacttgccatcaaagaatga 72622
>ref|NM_105862.3| Arabidopsis thaliana ATP binding / phosphotransferase, alcohol group as acceptor AT1G72040 mRNA, complete cds Length = 2099 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 97 gatgctttctatgctgaaccacagaggtatgcatacactttccagaattacgtctttgtg 156 ||||||||||| |||| || ||||||||||| || ||||||||||| || || ||||| Sbjct: 1046 gatgctttctactctgagcctcagaggtatgcttatactttccagaactatgtgtttgtc 1105 Query: 157 acaagggtgatgcaagaaagggagtcttcaagtggaataaagcctctccggctgatggaa 216 || || ||||||| || | |||||| | ||| | || |||||| || |||||||| Sbjct: 1106 actcggctgatgcaggagaaagagtctgcttctggggttaaacctctcaggttgatggaa 1165 Query: 217 agaagtgttttcagtgatagaatggtttttgtccgtgctgttcatgaagctaagtggatg 276 || ||||| |||||||| ||||||| ||||| ||||| ||||||||||| || |||||| Sbjct: 1166 aggagtgtcttcagtgaccgaatggtgtttgtgcgtgcggttcatgaagcgaaatggatg 1225 Query: 277 aacgagatggaaatcagcatttacgactcctggtt 311 || |||||||| ||||||||||||||||| ||||| Sbjct: 1226 aatgagatggagatcagcatttacgactcttggtt 1260
>gb|BT022033.1| Arabidopsis thaliana At1g72040 gene, complete cds Length = 1911 Score = 117 bits (59), Expect = 4e-23 Identities = 176/215 (81%) Strand = Plus / Plus Query: 97 gatgctttctatgctgaaccacagaggtatgcatacactttccagaattacgtctttgtg 156 ||||||||||| |||| || ||||||||||| || ||||||||||| || || ||||| Sbjct: 991 gatgctttctactctgagcctcagaggtatgcttatactttccagaactatgtgtttgtc 1050 Query: 157 acaagggtgatgcaagaaagggagtcttcaagtggaataaagcctctccggctgatggaa 216 || || ||||||| || | |||||| | ||| | || |||||| || |||||||| Sbjct: 1051 actcggctgatgcaggagaaagagtctgcttctggggttaaacctctcaggttgatggaa 1110 Query: 217 agaagtgttttcagtgatagaatggtttttgtccgtgctgttcatgaagctaagtggatg 276 || ||||| |||||||| ||||||| ||||| ||||| ||||||||||| || |||||| Sbjct: 1111 aggagtgtcttcagtgaccgaatggtgtttgtgcgtgcggttcatgaagcgaaatggatg 1170 Query: 277 aacgagatggaaatcagcatttacgactcctggtt 311 || |||||||| ||||||||||||||||| ||||| Sbjct: 1171 aatgagatggagatcagcatttacgactcttggtt 1205
>gb|AC069273.4|AC069273 Arabidopsis thaliana chromosome 1 BAC F28P5 genomic sequence, complete sequence Length = 38629 Score = 79.8 bits (40), Expect = 9e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 244 tttgtccgtgctgttcatgaagctaagtggatgaacgagatggaaatcagcatttacgac 303 ||||| ||||| ||||||||||| || |||||||| |||||||| ||||||||||||||| Sbjct: 28438 tttgtgcgtgcggttcatgaagcgaaatggatgaatgagatggagatcagcatttacgac 28497 Query: 304 tcctggtt 311 || ||||| Sbjct: 28498 tcttggtt 28505 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 97 gatgctttctatgctgaaccacagaggtatgcatacactttccagaa 143 ||||||||||| |||| || ||||||||||| || ||||||||||| Sbjct: 28207 gatgctttctactctgagcctcagaggtatgcttatactttccagaa 28253
>gb|AY089150.1| Arabidopsis thaliana clone 3878 mRNA, complete sequence Length = 883 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 271 tggatgaacgagatggaaatcagcatttacgactcctggtt 311 |||||||| |||||||| ||||||||||||||||| ||||| Sbjct: 6 tggatgaatgagatggagatcagcatttacgactcttggtt 46
>emb|BX571723.7| Zebrafish DNA sequence from clone DKEYP-51D5 in linkage group 17, complete sequence Length = 201159 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 341 ttatccctgatggttttatttatcta 366 |||| ||||||||||||||||||||| Sbjct: 126425 ttatacctgatggttttatttatcta 126400
>dbj|AK136081.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420453K20 product:unclassifiable, full insert sequence Length = 2590 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctgttgcaaaatggcaggat 69 ||||||||||||||||||||| Sbjct: 435 cctgttgcaaaatggcaggat 415
>gb|AC158596.7| Mus musculus 10 BAC RP23-188F7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207673 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 cctgttgcaaaatggcaggat 69 ||||||||||||||||||||| Sbjct: 76747 cctgttgcaaaatggcaggat 76727
>gb|AC161464.3| Gallus gallus BAC clone CH261-163N1 from chromosome ul, complete sequence Length = 149167 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 catgagaaacatgaaagctgg 477 ||||||||||||||||||||| Sbjct: 95604 catgagaaacatgaaagctgg 95624
>gb|AC153955.3| Mus musculus 10 BAC RP24-167A12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 154271 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 cctgttgcaaaatggcaggat 69 ||||||||||||||||||||| Sbjct: 25052 cctgttgcaaaatggcaggat 25072
>gb|AC122357.4| Mus musculus BAC clone RP23-403O8 from chromosome 13, complete sequence Length = 203039 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 187100 tttgttgtcagtcagtcagc 187119 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 61592 tttgttgtcagtcagtcagc 61611
>gb|AC156572.3| Mus musculus BAC clone RP23-216C6 from chromosome 13, complete sequence Length = 208578 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 179173 tttgttgtcagtcagtcagc 179192
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 ccagaattacgtctttgtga 157 |||||||||||||||||||| Sbjct: 1392510 ccagaattacgtctttgtga 1392491
>gb|AC124426.4| Mus musculus BAC clone RP24-231B8 from chromosome 13, complete sequence Length = 199585 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 172138 tttgttgtcagtcagtcagc 172157
>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence Length = 206592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 acttccttccaaaggacaag 499 |||||||||||||||||||| Sbjct: 45914 acttccttccaaaggacaag 45895
>gb|AY090091.1| Blomia tropicalis trypsin mRNA, complete cds Length = 801 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ttgatgctttctatgctgaa 114 |||||||||||||||||||| Sbjct: 80 ttgatgctttctatgctgaa 99
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 acttccttccaaaggacaag 499 |||||||||||||||||||| Sbjct: 178532 acttccttccaaaggacaag 178551
>emb|AL135786.17| Human DNA sequence from clone RP11-12D24 on chromosome 9p23-24.3 Contains the RLN1 gene for relaxin 1(H1) (RLXH1),the RLN2 gene for relaxin 2 (H2) (RLXH2), a high-mobility group nucleosomal binding domain 2 (HMGN2) pseudogene, a novel pseudogene, the gene for uncharacterized hematopoietic stem/progenitor cells protein (MDS030), a novel pseudogene (FLJ39176) and four CpG islands, complete sequence Length = 156592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aagggagtcttcaagtggaa 193 |||||||||||||||||||| Sbjct: 18028 aagggagtcttcaagtggaa 18047
>gb|AC069228.26| Homo sapiens 12 BAC RP11-315E17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142687 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tggaaagaagtgttttcagt 231 |||||||||||||||||||| Sbjct: 109409 tggaaagaagtgttttcagt 109428
>gb|AC111648.6| Rattus norvegicus 2 BAC CH230-103N18 (Children's Hospital Oakland Research Institute) complete sequence Length = 235343 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 taccttcaaggtttgcatgagaaa 465 ||||||||||||||||||| |||| Sbjct: 152460 taccttcaaggtttgcatgtgaaa 152483
>emb|AL672225.15| Mouse DNA sequence from clone RP23-384G1 on chromosome 11 Contains the 5' end of the Spnb2 gene for spectrin beta 2 and a CpG island, complete sequence Length = 172823 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 462 gaaacatgaaagctggctac 481 |||||||||||||||||||| Sbjct: 34710 gaaacatgaaagctggctac 34729
>gb|AC093433.2| Homo sapiens chromosome 1 clone RP11-363H12, complete sequence Length = 172613 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ctgatggttttatttatcta 366 |||||||||||||||||||| Sbjct: 70754 ctgatggttttatttatcta 70735
>dbj|AK083869.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130032O11 product:unclassifiable, full insert sequence Length = 4614 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gaaacatgaaagctggctac 481 |||||||||||||||||||| Sbjct: 1906 gaaacatgaaagctggctac 1887
>gb|AF061023.1|AF061023 Gallus gallus ChT1 gene, complete cds Length = 11586 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 agaattacgtctttgtgaca 159 |||||||||||||||||||| Sbjct: 7670 agaattacgtctttgtgaca 7651
>emb|AL138499.4|CNS01DWU Human chromosome 14 DNA sequence BAC R-132J14 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 185713 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ttcagtgatagaatggtttt 245 |||||||||||||||||||| Sbjct: 151481 ttcagtgatagaatggtttt 151500
>gb|AC171012.3| Gallus gallus BAC clone CH261-128I7 from chromosome ul, complete sequence Length = 231142 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 agaattacgtctttgtgaca 159 |||||||||||||||||||| Sbjct: 214357 agaattacgtctttgtgaca 214338
>emb|CT573034.8| Mouse DNA sequence from clone RP23-156C20 on chromosome 13, complete sequence Length = 117658 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 88510 tttgttgtcagtcagtcagc 88491
>emb|CT030240.7| Mouse DNA sequence from clone RP23-26N21 on chromosome 13, complete sequence Length = 175209 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 13822 tttgttgtcagtcagtcagc 13803
>emb|CT030185.11| Mouse DNA sequence from clone RP23-204L16 on chromosome 13, complete sequence Length = 116416 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 53367 tttgttgtcagtcagtcagc 53348
>emb|CT030722.6| Mouse DNA sequence from clone RP23-191N15 on chromosome 13, complete sequence Length = 187837 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 159687 tttgttgtcagtcagtcagc 159668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 tttgttgtcagtcagtcagc 526 |||||||||||||||||||| Sbjct: 64986 tttgttgtcagtcagtcagc 64967
>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete sequence Length = 221859 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 acttccttccaaaggacaag 499 |||||||||||||||||||| Sbjct: 114443 acttccttccaaaggacaag 114462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,360,702 Number of Sequences: 3902068 Number of extensions: 5360702 Number of successful extensions: 94131 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93957 Number of HSP's gapped (non-prelim): 172 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)