ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 343 4e-91
2gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome... 343 4e-91
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 343 4e-91
4gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome... 343 4e-91
5dbj|AK122024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 1e-88
6gb|AY129086.1| Lettuce mosaic virus polyprotein mRNA, partial cds 46 0.13
7gb|AF369020.1|AF369020 Lettuce mosaic virus LMV-Tn23.1 polyprote... 46 0.13
8gb|AF368982.1|AF368982 Lettuce mosaic virus LMV-TnOL2 polyprotei... 46 0.13
9dbj|D21877.1|SUHNAPH Hemicentrotus pulcherrimus mRNA for Nucleos... 46 0.13
10ref|XM_513683.1| PREDICTED: Pan troglodytes similar to TTF2 prot... 44 0.51
11ref|XM_456896.1| Debaryomyces hansenii CBS767 hypothetical prote... 44 0.51
12gb|BC015341.1| Homo sapiens transcription termination factor, RN... 44 0.51
13gb|BC030058.1| Homo sapiens transcription termination factor, RN... 44 0.51
14ref|NM_003594.3| Homo sapiens transcription termination factor, ... 44 0.51
15emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on ch... 44 0.51
16emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 44 0.51
17gb|AF080255.1|AF080255 Homo sapiens lodestar protein mRNA, compl... 44 0.51
18gb|AF073771.1|AF073771 Homo sapiens RNA polymerase II terminatio... 44 0.51
19ref|NM_104097.3| Arabidopsis thaliana catalytic AT1G52160 mRNA, ... 42 2.0
20emb|AJ966425.1| Festuca rubra chloroplast ACCase gene for acetyl... 42 2.0
21gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosom... 42 2.0
22gb|AC164314.5| Mus musculus BAC clone RP23-17J18 from chromosome... 42 2.0
23gb|BT000791.1| Arabidopsis thaliana clone RAFL07-09-G16 (R10701)... 42 2.0
24gb|AY117303.1| Arabidopsis thaliana unknown protein (At1g52160) ... 42 2.0
25gb|AY070061.1| Arabidopsis thaliana unknown protein (At1g52160) ... 42 2.0
26dbj|AK222156.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 2.0
27gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 2.0
28gb|AC022354.1|AC022354 Arabidopsis thaliana chromosome 1 BAC F9I... 42 2.0
29emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chro... 42 2.0
30ref|NM_115490.3| Arabidopsis thaliana nucleic acid binding / nuc... 40 8.0
31ref|NM_101190.2| Arabidopsis thaliana protein binding / ubiquiti... 40 8.0
32gb|AC162792.5| Mus musculus chromosome 7, clone RP24-187H10, com... 40 8.0
33gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 8.0
34gb|AC091483.6| Trypanosoma brucei chromosome 3 clone RPCI93-48K5... 40 8.0
35gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 8.0
36ref|XM_416513.1| PREDICTED: Gallus gallus similar to Ubiquitin c... 40 8.0
37gb|AE006553.1| Streptococcus pyogenes M1 GAS, section 82 of 167 ... 40 8.0
38gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 8.0
39gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 8.0
40gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 8.0
41gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, co... 40 8.0
42gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome ... 40 8.0
43gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete s... 40 8.0
44gb|BC041737.1| Xenopus laevis eukaryotic initiation factor 5 (eI... 40 8.0
45gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete seq... 40 8.0
46gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 8.0
47gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete s... 40 8.0
48ref|XM_779500.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
49ref|XM_782577.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.0
50gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.0
51emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B... 40 8.0
52gb|BT008327.1| Arabidopsis thaliana At3g56320 gene, complete cds 40 8.0
53emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chr... 40 8.0
54ref|NM_136611.2| Drosophila melanogaster Mystery 45A CG8070-RA (... 40 8.0
55gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.0
56gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 40 8.0
57gb|AY070560.1| Drosophila melanogaster LD33051 full length cDNA 40 8.0
58gb|AF173549.1|AF173549 Drosophila melanogaster mystery 45A mRNA,... 40 8.0
59gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, comp... 40 8.0
60gb|BT024484.1| Arabidopsis thaliana At1g13195 mRNA, complete cds 40 8.0
61gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45... 40 8.0
62ref|NM_068573.3| Caenorhabditis elegans Suppressor with Morpholo... 40 8.0
63gb|AF368958.1|AF368958 Lettuce mosaic virus LMV-Br6 polyprotein ... 40 8.0
64gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, r... 40 8.0
65gb|AC074019.7| Homo sapiens BAC clone RP11-271M11 from 2, comple... 40 8.0
66gb|AC091955.2| Homo sapiens chromosome 5 clone RP11-429P5, compl... 40 8.0
67gb|AY087531.1| Arabidopsis thaliana clone 36399 mRNA, complete s... 40 8.0
68gb|AF465707.1| Botrydium stoloniferum ribulose-1,5-bisphosphate ... 40 8.0
69gb|AF465706.1| Botrydium becharianum ribulose-1,5-bisphosphate c... 40 8.0
70gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, compl... 40 8.0
71gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 40 8.0
72gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 40 8.0
73gb|AF123462.1|DJ526N18 Homo sapiens BAC526N18 neurexin III gene,... 40 8.0
74gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 8.0
75gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, r... 40 8.0
76emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chr... 40 8.0
77gb|AC140422.2| Mus musculus BAC clone RP24-445D5 from 3, complet... 40 8.0
78emb|BX255908.4| Zebrafish DNA sequence from clone CH211-250O16 i... 40 8.0
79dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.0
80emb|AL929158.8| Mouse DNA sequence from clone RP23-92O15 on chro... 40 8.0
81gb|AF064743.1| Botrydium stoloniferum ribulose 1,5-bisphosphate ... 40 8.0 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  343 bits (173), Expect = 4e-91
 Identities = 344/401 (85%)
 Strand = Plus / Plus

                                                                           
Query: 179     cttgtggacgaggaggaagatgatgttgccatggatgagccggttgttcgacaaccggtt 238
               |||||||||||||||||||| |||||||  |||||||||  ||||||||| || ||  ||
Sbjct: 3841963 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 3842022

                                                                           
Query: 239     gctgaagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 298
               || |||| ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3842023 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 3842082

                                                                           
Query: 299     gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 358
               |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 3842083 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 3842142

                                                                           
Query: 359     gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 418
               || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 3842143 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 3842202

                                                                           
Query: 419     gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 478
               || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 3842203 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 3842262

                                                                           
Query: 479     tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgcaaggaaa 538
               |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 3842263 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 3842322

                                                        
Query: 539     gaaccacatgcactgctggaatacaatgtaaaatctacaga 579
               |||||||| || ||||||||||||| |||||| ||| ||||
Sbjct: 3842323 gaaccacaggctctgctggaatacagtgtaaattcttcaga 3842363



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 291     cgttgcctgctcatcttgggcttg 314
               |||||||||||||| |||||||||
Sbjct: 5028687 cgttgcctgctcattttgggcttg 5028664
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>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11,
              complete sequence
          Length = 132151

 Score =  343 bits (173), Expect = 4e-91
 Identities = 344/401 (85%)
 Strand = Plus / Plus

                                                                          
Query: 179    cttgtggacgaggaggaagatgatgttgccatggatgagccggttgttcgacaaccggtt 238
              |||||||||||||||||||| |||||||  |||||||||  ||||||||| || ||  ||
Sbjct: 120587 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 120646

                                                                          
Query: 239    gctgaagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 298
              || |||| ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 120647 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 120706

                                                                          
Query: 299    gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 358
              |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 120707 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 120766

                                                                          
Query: 359    gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 418
              || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 120767 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 120826

                                                                          
Query: 419    gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 478
              || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 120827 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 120886

                                                                          
Query: 479    tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgcaaggaaa 538
              |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 120887 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 120946

                                                       
Query: 539    gaaccacatgcactgctggaatacaatgtaaaatctacaga 579
              |||||||| || ||||||||||||| |||||| ||| ||||
Sbjct: 120947 gaaccacaggctctgctggaatacagtgtaaattcttcaga 120987
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  343 bits (173), Expect = 4e-91
 Identities = 344/401 (85%)
 Strand = Plus / Plus

                                                                           
Query: 179     cttgtggacgaggaggaagatgatgttgccatggatgagccggttgttcgacaaccggtt 238
               |||||||||||||||||||| |||||||  |||||||||  ||||||||| || ||  ||
Sbjct: 3842074 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 3842133

                                                                           
Query: 239     gctgaagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 298
               || |||| ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3842134 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 3842193

                                                                           
Query: 299     gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 358
               |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 3842194 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 3842253

                                                                           
Query: 359     gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 418
               || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 3842254 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 3842313

                                                                           
Query: 419     gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 478
               || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 3842314 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 3842373

                                                                           
Query: 479     tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgcaaggaaa 538
               |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 3842374 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 3842433

                                                        
Query: 539     gaaccacatgcactgctggaatacaatgtaaaatctacaga 579
               |||||||| || ||||||||||||| |||||| ||| ||||
Sbjct: 3842434 gaaccacaggctctgctggaatacagtgtaaattcttcaga 3842474



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 291     cgttgcctgctcatcttgggcttg 314
               |||||||||||||| |||||||||
Sbjct: 5027902 cgttgcctgctcattttgggcttg 5027879
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>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0015N19, complete sequence
          Length = 168430

 Score =  343 bits (173), Expect = 4e-91
 Identities = 344/401 (85%)
 Strand = Plus / Plus

                                                                         
Query: 179   cttgtggacgaggaggaagatgatgttgccatggatgagccggttgttcgacaaccggtt 238
             |||||||||||||||||||| |||||||  |||||||||  ||||||||| || ||  ||
Sbjct: 48436 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 48495

                                                                         
Query: 239   gctgaagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 298
             || |||| ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 48496 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 48555

                                                                         
Query: 299   gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 358
             |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 48556 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 48615

                                                                         
Query: 359   gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 418
             || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 48616 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 48675

                                                                         
Query: 419   gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 478
             || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 48676 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 48735

                                                                         
Query: 479   tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgcaaggaaa 538
             |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 48736 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 48795

                                                      
Query: 539   gaaccacatgcactgctggaatacaatgtaaaatctacaga 579
             |||||||| || ||||||||||||| |||||| ||| ||||
Sbjct: 48796 gaaccacaggctctgctggaatacagtgtaaattcttcaga 48836
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>dbj|AK122024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111P14, full
            insert sequence
          Length = 3941

 Score =  335 bits (169), Expect = 1e-88
 Identities = 343/401 (85%)
 Strand = Plus / Plus

                                                                        
Query: 179  cttgtggacgaggaggaagatgatgttgccatggatgagccggttgttcgacaaccggtt 238
            |||||||||||||||||||| |||||||  |||||||||  ||||||||  || ||  ||
Sbjct: 713  cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcagcagcctatt 772

                                                                        
Query: 239  gctgaagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 298
            || |||| ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 773  gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 832

                                                                        
Query: 299  gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 358
            |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 833  gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 892

                                                                        
Query: 359  gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 418
            || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 893  gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 952

                                                                        
Query: 419  gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 478
            || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 953  gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 1012

                                                                        
Query: 479  tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgcaaggaaa 538
            |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 1013 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 1072

                                                     
Query: 539  gaaccacatgcactgctggaatacaatgtaaaatctacaga 579
            |||||||| || ||||||||||||| |||||| ||| ||||
Sbjct: 1073 gaaccacaggctctgctggaatacagtgtaaattcttcaga 1113
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>gb|AY129086.1| Lettuce mosaic virus polyprotein mRNA, partial cds
          Length = 278

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 355 caatgatgaagaagacgaagatatgga 381
           |||||||||||||||||| ||||||||
Sbjct: 99  caatgatgaagaagacgacgatatgga 125
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>gb|AF369020.1|AF369020 Lettuce mosaic virus LMV-Tn23.1 polyprotein gene, partial cds
          Length = 216

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 355 caatgatgaagaagacgaagatatgga 381
           |||||||||||||||||| ||||||||
Sbjct: 57  caatgatgaagaagacgacgatatgga 83
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>gb|AF368982.1|AF368982 Lettuce mosaic virus LMV-TnOL2 polyprotein gene, partial cds
          Length = 216

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 355 caatgatgaagaagacgaagatatgga 381
           |||||||||||||||||| ||||||||
Sbjct: 57  caatgatgaagaagacgacgatatgga 83
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>dbj|D21877.1|SUHNAPH Hemicentrotus pulcherrimus mRNA for Nucleosome assembly protein
           homologue, complete cds
          Length = 3412

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 362 gaagaagacgaagatatggagga 384
           |||||||||||||||||||||||
Sbjct: 546 gaagaagacgaagatatggagga 568
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>ref|XM_513683.1| PREDICTED: Pan troglodytes similar to TTF2 protein (LOC457157), mRNA
          Length = 3307

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1183 gacgaggaggaagatgatgttg 1204
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>ref|XM_456896.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A13475g)
            partial mRNA
          Length = 2283

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 359  gatgaagaagacgaagatatggagga 384
            |||||||||||||||||| |||||||
Sbjct: 1768 gatgaagaagacgaagatctggagga 1793
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>gb|BC015341.1| Homo sapiens transcription termination factor, RNA polymerase II,
            mRNA (cDNA clone IMAGE:4431381), containing frame-shift
            errors
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1064 gacgaggaggaagatgatgttg 1085
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>gb|BC030058.1| Homo sapiens transcription termination factor, RNA polymerase II,
            mRNA (cDNA clone MGC:39244 IMAGE:5457833), complete cds
          Length = 2628

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1061 gacgaggaggaagatgatgttg 1082
to top
>ref|NM_003594.3| Homo sapiens transcription termination factor, RNA polymerase II
            (TTF2), mRNA
          Length = 4860

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1077 gacgaggaggaagatgatgttg 1098
to top
>emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on chromosome 1 Contains the
             3' end of the TTF2 gene for RNA polymerase II
             transcription termination factor, the TRIM45 gene for
             tripartite motif-containing 45, a ribosomal protein S15a
             (RPS15A) pseudogene, the gene for immune costimulatory
             protein B7-H4 and a CpG island, complete sequence
          Length = 171595

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   gacgaggaggaagatgatgttg 206
             ||||||||||||||||||||||
Sbjct: 12703 gacgaggaggaagatgatgttg 12724
to top
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
               hansenii
          Length = 1249565

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 359     gatgaagaagacgaagatatggagga 384
               |||||||||||||||||| |||||||
Sbjct: 1096018 gatgaagaagacgaagatctggagga 1096043
to top
>gb|AF080255.1|AF080255 Homo sapiens lodestar protein mRNA, complete cds
          Length = 4629

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1087 gacgaggaggaagatgatgttg 1108
to top
>gb|AF073771.1|AF073771 Homo sapiens RNA polymerase II termination factor mRNA, complete cds
          Length = 3612

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 185  gacgaggaggaagatgatgttg 206
            ||||||||||||||||||||||
Sbjct: 1077 gacgaggaggaagatgatgttg 1098
to top
>ref|NM_104097.3| Arabidopsis thaliana catalytic AT1G52160 mRNA, complete cds
          Length = 2831

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 2651 agatgatgttgccatggatga 2671
to top
>emb|AJ966425.1| Festuca rubra chloroplast ACCase gene for acetyl-CoA carboxylase
          Length = 465

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 29 ctgaagctggatttgagtaca 49
          |||||||||||||||||||||
Sbjct: 20 ctgaagctggatttgagtaca 40
to top
>gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosome 17, complete
             sequence
          Length = 165036

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 508   tggaaggagatctggtgtgct 528
             |||||||||||||||||||||
Sbjct: 97823 tggaaggagatctggtgtgct 97843
to top
>gb|AC164314.5| Mus musculus BAC clone RP23-17J18 from chromosome 17, complete sequence
          Length = 212588

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 508   tggaaggagatctggtgtgct 528
             |||||||||||||||||||||
Sbjct: 76950 tggaaggagatctggtgtgct 76970
to top
>gb|BT000791.1| Arabidopsis thaliana clone RAFL07-09-G16 (R10701) unknown protein
            (At1g52160) mRNA, partial cds
          Length = 2774

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 2578 agatgatgttgccatggatga 2598
to top
>gb|AY117303.1| Arabidopsis thaliana unknown protein (At1g52160) mRNA, complete cds
          Length = 2704

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 2631 agatgatgttgccatggatga 2651
to top
>gb|AY070061.1| Arabidopsis thaliana unknown protein (At1g52160) mRNA, complete cds
          Length = 2818

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 2651 agatgatgttgccatggatga 2671
to top
>dbj|AK222156.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds,
            clone: RAFL23-11-G23
          Length = 1251

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 1011 agatgatgttgccatggatga 1031
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 356     aatgatgaagaagacgaagat 376
               |||||||||||||||||||||
Sbjct: 3007084 aatgatgaagaagacgaagat 3007104
to top
>gb|AC022354.1|AC022354 Arabidopsis thaliana chromosome 1 BAC F9I5 genomic sequence, complete
            sequence
          Length = 46335

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 196  agatgatgttgccatggatga 216
            |||||||||||||||||||||
Sbjct: 7326 agatgatgttgccatggatga 7306
to top
>emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chromosome 2, complete
             sequence
          Length = 143280

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 411   tcagcagagaaaggatgaatgtgga 435
             |||| ||||||||||||||||||||
Sbjct: 53541 tcagaagagaaaggatgaatgtgga 53565
to top
>ref|NM_115490.3| Arabidopsis thaliana nucleic acid binding / nucleotidyltransferase
           AT3G56320 mRNA, complete cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 atgatgaagaagacgaagat 376
           ||||||||||||||||||||
Sbjct: 368 atgatgaagaagacgaagat 349
to top
>ref|NM_101190.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT1G13195 mRNA, complete cds
          Length = 1721

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gatgaagaagacgaagatat 378
           ||||||||||||||||||||
Sbjct: 282 gatgaagaagacgaagatat 263
to top
>gb|AC162792.5| Mus musculus chromosome 7, clone RP24-187H10, complete sequence
          Length = 170668

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   aaggaaagaaccacatgcac 551
             ||||||||||||||||||||
Sbjct: 30828 aaggaaagaaccacatgcac 30809
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 531     caaggaaagaaccacatgca 550
               ||||||||||||||||||||
Sbjct: 1346570 caaggaaagaaccacatgca 1346589



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 531     caaggaaagaaccacatgca 550
               ||||||||||||||||||||
Sbjct: 1336546 caaggaaagaaccacatgca 1336565
to top
>gb|AC091483.6| Trypanosoma brucei chromosome 3 clone RPCI93-48K5, complete sequence
          Length = 161296

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   caaggaaagaaccacatgca 550
             ||||||||||||||||||||
Sbjct: 72282 caaggaaagaaccacatgca 72301



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   caaggaaagaaccacatgca 550
             ||||||||||||||||||||
Sbjct: 62258 caaggaaagaaccacatgca 62277
to top
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 812431 ttctcagaaatttggaagga 812412
to top
>ref|XM_416513.1| PREDICTED: Gallus gallus similar to Ubiquitin carboxyl-terminal
           hydrolase 5 (Ubiquitin thiolesterase 5)
           (Ubiquitin-specific processing protease 5)
           (Deubiquitinating enzyme 5) (Isopeptidase T)
           (LOC418290), mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 cacagacacctcagcagaga 420
           ||||||||||||||||||||
Sbjct: 360 cacagacacctcagcagaga 341
to top
>gb|AE006553.1| Streptococcus pyogenes M1 GAS, section 82 of 167 of the complete
           genome
          Length = 13576

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 496 ttctcagaaatttggaagga 515
           ||||||||||||||||||||
Sbjct: 129 ttctcagaaatttggaagga 110
to top
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 918350 ttctcagaaatttggaagga 918331
to top
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 857126 ttctcagaaatttggaagga 857107
to top
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 896353 ttctcagaaatttggaagga 896334
to top
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence
          Length = 176607

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    aaggaaagaaccacatgcac 551
              ||||||||||||||||||||
Sbjct: 129786 aaggaaagaaccacatgcac 129767
to top
>gb|AC163687.5| Mus musculus BAC clone RP23-3H13 from chromosome 17, complete sequence
          Length = 220643

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 532   aaggaaagaaccacatgcactgct 555
             |||||||||||||||| |||||||
Sbjct: 54609 aaggaaagaaccacattcactgct 54632
to top
>gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete sequence
          Length = 121741

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ggacgaggaggaagatgatg 203
             ||||||||||||||||||||
Sbjct: 23956 ggacgaggaggaagatgatg 23975
to top
>gb|BC041737.1| Xenopus laevis eukaryotic initiation factor 5 (eIF-5), mRNA (cDNA
            clone MGC:52788 IMAGE:4724643), complete cds
          Length = 1767

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ggacgaggaggaagatgatg 203
            ||||||||||||||||||||
Sbjct: 1574 ggacgaggaggaagatgatg 1593
to top
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence
          Length = 129327

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   atggttcttctcagaaattt 508
             ||||||||||||||||||||
Sbjct: 34187 atggttcttctcagaaattt 34206
to top
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 814909 ttctcagaaatttggaagga 814890
to top
>gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete sequence
          Length = 114611

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   ggacgaggaggaagatgatg 203
             ||||||||||||||||||||
Sbjct: 85251 ggacgaggaggaagatgatg 85232
to top
>ref|XM_779500.1| PREDICTED: Strongylocentrotus purpuratus similar to brefeldin
           A-inhibited guanine nucleotide-exchange protein 1
           (LOC579380), partial mRNA
          Length = 1108

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 323 aagatgcaggaaatgcggatggca 346
           ||||||||||| ||||||||||||
Sbjct: 128 aagatgcaggagatgcggatggca 105
to top
>ref|XM_782577.1| PREDICTED: Strongylocentrotus purpuratus similar to brefeldin
           A-inhibited guanine nucleotide-exchange protein 1
           (LOC582633), mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 323 aagatgcaggaaatgcggatggca 346
           ||||||||||| ||||||||||||
Sbjct: 611 aagatgcaggagatgcggatggca 588
to top
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 291   cgttgcctgctcatcttgggcttg 314
             |||||||||||||| |||||||||
Sbjct: 93141 cgttgcctgctcattttgggcttg 93118
to top
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   atgatgaagaagacgaagat 376
             ||||||||||||||||||||
Sbjct: 91510 atgatgaagaagacgaagat 91529
to top
>gb|BT008327.1| Arabidopsis thaliana At3g56320 gene, complete cds
          Length = 1812

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 357 atgatgaagaagacgaagat 376
           ||||||||||||||||||||
Sbjct: 55  atgatgaagaagacgaagat 36
to top
>emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 93419

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   acagacacctcagcagagaa 421
             ||||||||||||||||||||
Sbjct: 90667 acagacacctcagcagagaa 90686
to top
>ref|NM_136611.2| Drosophila melanogaster Mystery 45A CG8070-RA (Mys45A), mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atgatgaagaagacgaagat 376
            ||||||||||||||||||||
Sbjct: 1638 atgatgaagaagacgaagat 1657
to top
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    cgttgcctgctcatcttgggcttg 314
              |||||||||||||| |||||||||
Sbjct: 141020 cgttgcctgctcattttgggcttg 141043
to top
>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   atgatgaagaagacgaagat 376
             ||||||||||||||||||||
Sbjct: 82912 atgatgaagaagacgaagat 82893
to top
>gb|AY070560.1| Drosophila melanogaster LD33051 full length cDNA
          Length = 2390

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atgatgaagaagacgaagat 376
            ||||||||||||||||||||
Sbjct: 1623 atgatgaagaagacgaagat 1642
to top
>gb|AF173549.1|AF173549 Drosophila melanogaster mystery 45A mRNA, complete cds
          Length = 2139

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atgatgaagaagacgaagat 376
            ||||||||||||||||||||
Sbjct: 1556 atgatgaagaagacgaagat 1575
to top
>gb|AC154878.7| Mus musculus chromosome 7, clone RP23-250P5, complete sequence
          Length = 180302

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    aaggaaagaaccacatgcac 551
              ||||||||||||||||||||
Sbjct: 138510 aaggaaagaaccacatgcac 138529
to top
>gb|BT024484.1| Arabidopsis thaliana At1g13195 mRNA, complete cds
          Length = 783

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gatgaagaagacgaagatat 378
           ||||||||||||||||||||
Sbjct: 38  gatgaagaagacgaagatat 19
to top
>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone
             BACR08E17, complete sequence
          Length = 178262

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   atgatgaagaagacgaagat 376
             ||||||||||||||||||||
Sbjct: 10091 atgatgaagaagacgaagat 10110
to top
>ref|NM_068573.3| Caenorhabditis elegans Suppressor with Morphological effect on
            Genitalia family member (smg-3) (smg-3) mRNA, complete
            cds
          Length = 3686

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atgatgaagaagacgaagat 376
            ||||||||||||||||||||
Sbjct: 2786 atgatgaagaagacgaagat 2805
to top
>gb|AF368958.1|AF368958 Lettuce mosaic virus LMV-Br6 polyprotein gene, partial cds
          Length = 216

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 354 ccaatgatgaagaagacgaagatatgga 381
           ||||||||||||| ||||| ||||||||
Sbjct: 56  ccaatgatgaagacgacgacgatatgga 83
to top
>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
             BACR10M14, complete sequence
          Length = 189757

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   atgatgaagaagacgaagat 376
             ||||||||||||||||||||
Sbjct: 39959 atgatgaagaagacgaagat 39940
to top
>gb|AC074019.7| Homo sapiens BAC clone RP11-271M11 from 2, complete sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 558   aatacaatgtaaaatctaca 577
             ||||||||||||||||||||
Sbjct: 31182 aatacaatgtaaaatctaca 31163
to top
>gb|AC091955.2| Homo sapiens chromosome 5 clone RP11-429P5, complete sequence
          Length = 101948

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   aggaagatgatgttgccatg 211
             ||||||||||||||||||||
Sbjct: 39605 aggaagatgatgttgccatg 39586
to top
>gb|AY087531.1| Arabidopsis thaliana clone 36399 mRNA, complete sequence
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 359 gatgaagaagacgaagatat 378
           ||||||||||||||||||||
Sbjct: 273 gatgaagaagacgaagatat 254
to top
>gb|AF465707.1| Botrydium stoloniferum ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene,
           complete cds; chloroplast gene for chloroplast product
          Length = 1467

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 tacaatgtaaaatctacaga 579
           ||||||||||||||||||||
Sbjct: 97  tacaatgtaaaatctacaga 116
to top
>gb|AF465706.1| Botrydium becharianum ribulose-1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene,
           complete cds; chloroplast gene for chloroplast product
          Length = 1467

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 tacaatgtaaaatctacaga 579
           ||||||||||||||||||||
Sbjct: 97  tacaatgtaaaatctacaga 116
to top
>gb|AC154288.2| Mus musculus BAC clone RP23-447G10 from 17, complete sequence
          Length = 195195

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 532    aaggaaagaaccacatgcactgct 555
              |||||||||||||||| |||||||
Sbjct: 133867 aaggaaagaaccacattcactgct 133890
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   gatgaagaagacgaagatat 378
             ||||||||||||||||||||
Sbjct: 75999 gatgaagaagacgaagatat 76018
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
             sequence
          Length = 243313

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   atgatgaagaagacgaagat 376
             ||||||||||||||||||||
Sbjct: 46801 atgatgaagaagacgaagat 46782
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>gb|AF123462.1|DJ526N18 Homo sapiens BAC526N18 neurexin III gene, partial cds
          Length = 180104

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    gaggaagatgatgttgccat 210
              ||||||||||||||||||||
Sbjct: 134254 gaggaagatgatgttgccat 134235
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 357     atgatgaagaagacgaagat 376
               ||||||||||||||||||||
Sbjct: 1914293 atgatgaagaagacgaagat 1914274
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>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones
            DS05998, DS07727, DS05175, and DS01885, complete sequence
          Length = 204617

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 357  atgatgaagaagacgaagat 376
            ||||||||||||||||||||
Sbjct: 1903 atgatgaagaagacgaagat 1922
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>emb|CT009575.8| Mouse DNA sequence from clone RP23-107N17 on chromosome 17, complete
             sequence
          Length = 226188

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 532   aaggaaagaaccacatgcactgct 555
             |||||||||||||||| |||||||
Sbjct: 46482 aaggaaagaaccacattcactgct 46459
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>gb|AC140422.2| Mus musculus BAC clone RP24-445D5 from 3, complete sequence
          Length = 172767

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   aaggaaagaaccacatgcac 551
             ||||||||||||||||||||
Sbjct: 36456 aaggaaagaaccacatgcac 36437
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>emb|BX255908.4| Zebrafish DNA sequence from clone CH211-250O16 in linkage group 5,
              complete sequence
          Length = 121726

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 552    tgctggaatacaatgtaaaa 571
              ||||||||||||||||||||
Sbjct: 102134 tgctggaatacaatgtaaaa 102115
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>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133,
             complete sequence
          Length = 106411

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gacgaggaggaagatgatgt 204
             ||||||||||||||||||||
Sbjct: 42474 gacgaggaggaagatgatgt 42493
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>emb|AL929158.8| Mouse DNA sequence from clone RP23-92O15 on chromosome 2, complete
              sequence
          Length = 125262

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    ttctcagaaatttggaagga 515
              ||||||||||||||||||||
Sbjct: 118809 ttctcagaaatttggaagga 118790
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>gb|AF064743.1| Botrydium stoloniferum ribulose 1,5-bisphosphate
           carboxylase/oxygenase large subunit (rbcL) gene,
           chloroplast gene encoding chloroplast protein, partial
           cds
          Length = 1380

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 560 tacaatgtaaaatctacaga 579
           ||||||||||||||||||||
Sbjct: 61  tacaatgtaaaatctacaga 80


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,781,406
Number of Sequences: 3902068
Number of extensions: 5781406
Number of successful extensions: 122306
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 121900
Number of HSP's gapped (non-prelim): 406
length of query: 590
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 567
effective length of database: 17,143,297,704
effective search space: 9720249798168
effective search space used: 9720249798168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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