Clone Name | bah63b06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK119236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D09, full insert sequence Length = 1972 Score = 795 bits (401), Expect = 0.0 Identities = 587/649 (90%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 322 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 323 tactggaaggccggcaagcacgccgaccgagccgtgtttgatctgtacttcaggaaaaat 382 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 |||||||||||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 383 ccatttggtggagaattcactgtttttgctggtcttgaagaatgcattaagttcattgca 442 Query: 185 aactttaagttcacagaagatgagatttctttcctgcagtcagtcatgccaatgtgtgag 244 || |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 443 aattttaagttcacagaagatgacattttgttcctgcaatcagtcatgccaatgtgtgag 502 Query: 245 gattcattctttgattatctccgtggaattgattgctctgatgttgaagtgtactccatt 304 ||| | ||||||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 503 gatgcgttctttgattatctcaggaaaaccgactgctctgatgtggaagtgtactccatt 562 Query: 305 cctgagggctcggtagtctttccaaaagtgcccttgatgagagtcgagggtcctgttgct 364 |||||||| || || || ||||||||||| || |||||| |||| |||||||| |||||| Sbjct: 563 cctgagggttcagtggtttttccaaaagttcctttgatgcgagttgagggtccagttgct 622 Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 623 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 682 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 683 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 742 Query: 485 ttaagacgagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatggga 544 || |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 743 ttgagacgagcacaggggcctgacggtgcaataagtgcttcaaagtattgtttcatggga 802 Query: 545 ggctttgatgcaaccagtaatgtattggcaggacatctatttggcataccactccgtgga 604 || |||||||||||||||||||| ||||| ||| |||| |||||||||||||| || ||| Sbjct: 803 ggttttgatgcaaccagtaatgttttggctggaaatctgtttggcataccacttcgcgga 862 Query: 605 acacattctcatgcttatgtcagctcatatatgagccttgatgagatcc 653 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 863 acacattctcatgcttatgttagctcatatatgagccttgatgagatcc 911
>dbj|AK099191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110O20, full insert sequence Length = 2128 Score = 795 bits (401), Expect = 0.0 Identities = 587/649 (90%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 309 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 310 tactggaaggccggcaagcacgccgaccgagccgtgtttgatctgtacttcaggaaaaat 369 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 |||||||||||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 370 ccatttggtggagaattcactgtttttgctggtcttgaagaatgcattaagttcattgca 429 Query: 185 aactttaagttcacagaagatgagatttctttcctgcagtcagtcatgccaatgtgtgag 244 || |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 430 aattttaagttcacagaagatgacattttgttcctgcaatcagtcatgccaatgtgtgag 489 Query: 245 gattcattctttgattatctccgtggaattgattgctctgatgttgaagtgtactccatt 304 ||| | ||||||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 490 gatgcgttctttgattatctcaggaaaaccgactgctctgatgtggaagtgtactccatt 549 Query: 305 cctgagggctcggtagtctttccaaaagtgcccttgatgagagtcgagggtcctgttgct 364 |||||||| || || || ||||||||||| || |||||| |||| |||||||| |||||| Sbjct: 550 cctgagggttcagtggtttttccaaaagttcctttgatgcgagttgagggtccagttgct 609 Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 610 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 669 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 670 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 729 Query: 485 ttaagacgagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatggga 544 || |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 730 ttgagacgagcacaggggcctgacggtgcaataagtgcttcaaagtattgtttcatggga 789 Query: 545 ggctttgatgcaaccagtaatgtattggcaggacatctatttggcataccactccgtgga 604 || |||||||||||||||||||| ||||| ||| |||| |||||||||||||| || ||| Sbjct: 790 ggttttgatgcaaccagtaatgttttggctggaaatctgtttggcataccacttcgcgga 849 Query: 605 acacattctcatgcttatgtcagctcatatatgagccttgatgagatcc 653 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 850 acacattctcatgcttatgttagctcatatatgagccttgatgagatcc 898
>dbj|AK067438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103F09, full insert sequence Length = 2216 Score = 795 bits (401), Expect = 0.0 Identities = 587/649 (90%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 321 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 322 tactggaaggccggcaagcacgccgaccgagccgtgtttgatctgtacttcaggaaaaat 381 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 |||||||||||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 382 ccatttggtggagaattcactgtttttgctggtcttgaagaatgcattaagttcattgca 441 Query: 185 aactttaagttcacagaagatgagatttctttcctgcagtcagtcatgccaatgtgtgag 244 || |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 442 aattttaagttcacagaagatgacattttgttcctgcaatcagtcatgccaatgtgtgag 501 Query: 245 gattcattctttgattatctccgtggaattgattgctctgatgttgaagtgtactccatt 304 ||| | ||||||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 502 gatgcgttctttgattatctcaggaaaaccgactgctctgatgtggaagtgtactccatt 561 Query: 305 cctgagggctcggtagtctttccaaaagtgcccttgatgagagtcgagggtcctgttgct 364 |||||||| || || || ||||||||||| || |||||| |||| |||||||| |||||| Sbjct: 562 cctgagggttcagtggtttttccaaaagttcctttgatgcgagttgagggtccagttgct 621 Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 622 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 681 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 682 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 741 Query: 485 ttaagacgagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatggga 544 || |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 742 ttgagacgagcacaggggcctgacggtgcaataagtgcttcaaagtattgtttcatggga 801 Query: 545 ggctttgatgcaaccagtaatgtattggcaggacatctatttggcataccactccgtgga 604 || |||||||||||||||||||| ||||| ||| |||| |||||||||||||| || ||| Sbjct: 802 ggttttgatgcaaccagtaatgttttggctggaaatctgtttggcataccacttcgcgga 861 Query: 605 acacattctcatgcttatgtcagctcatatatgagccttgatgagatcc 653 |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 862 acacattctcatgcttatgttagctcatatatgagccttgatgagatcc 910
>ref|NM_185227.2| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1608 Score = 763 bits (385), Expect = 0.0 Identities = 571/633 (90%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 73 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 132 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 |||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 133 tactggaaggccggcaagcacgccgaccgagccgtgtttgatctgtacttcaggaaaaat 192 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 |||||||||||||| || ||||||||||| |||||||| ||||| || || ||||||||| Sbjct: 193 ccatttggtggagaattcactgtttttgctggtcttgaagaatgcattaagttcattgca 252 Query: 185 aactttaagttcacagaagatgagatttctttcctgcagtcagtcatgccaatgtgtgag 244 || |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 253 aattttaagttcacagaagatgacattttgttcctgcaatcagtcatgccaatgtgtgag 312 Query: 245 gattcattctttgattatctccgtggaattgattgctctgatgttgaagtgtactccatt 304 ||| | ||||||||||||||| | || || ||||||||||| ||||||||||||||| Sbjct: 313 gatgcgttctttgattatctcaggaaaaccgactgctctgatgtggaagtgtactccatt 372 Query: 305 cctgagggctcggtagtctttccaaaagtgcccttgatgagagtcgagggtcctgttgct 364 |||||||| || || || ||||||||||| || |||||| |||| |||||||| |||||| Sbjct: 373 cctgagggttcagtggtttttccaaaagttcctttgatgcgagttgagggtccagttgct 432 Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 433 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 492 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 493 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 552 Query: 485 ttaagacgagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatggga 544 || |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 553 ttgagacgagcacaggggcctgacggtgcaataagtgcttcaaagtattgtttcatggga 612 Query: 545 ggctttgatgcaaccagtaatgtattggcaggacatctatttggcataccactccgtgga 604 || |||||||||||||||||||| ||||| ||| |||| |||||||||||||| || ||| Sbjct: 613 ggttttgatgcaaccagtaatgttttggctggaaatctgtttggcataccacttcgcgga 672 Query: 605 acacattctcatgcttatgtcagctcatatatg 637 |||||||||||||||||||| |||||||||||| Sbjct: 673 acacattctcatgcttatgttagctcatatatg 705
>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16, complete sequence Length = 163738 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 100 gtttgacctgtactttaggaaaaatccatttggtggagagtttactgtttttgccggtct 159 |||||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 135151 gtttgatctgtacttcaggaaaaatccatttggtggagaattcactgtttttgctggtct 135210 Query: 160 tgaggaatgtataaaattcattgcaaactttaagttcacagaagatgagatttctttcct 219 ||| ||||| || || ||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 135211 tgaagaatgcattaagttcattgcaaattttaagttcacagaagatgacattttgttcct 135270 Query: 220 gcagtcagtcatgccaatgtgtgagg 245 ||| |||||||||||||||||||||| Sbjct: 135271 gcaatcagtcatgccaatgtgtgagg 135296 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132520 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 132579 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 |||||||||||||||||||||||||||| ||||||| Sbjct: 132580 tactggaaggccggcaagcacgccgaccgagccgtgt 132616 Score = 143 bits (72), Expect = 8e-31 Identities = 120/136 (88%) Strand = Plus / Plus Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 135735 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 135794 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 135795 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 135854 Query: 485 ttaagacgagcacagg 500 || ||||||||||||| Sbjct: 135855 ttgagacgagcacagg 135870 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 496 acaggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgc 555 |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 135973 acaggggcctgacggtgcaataagtgcttcaaagtattgtttcatgggaggttttgatgc 136032 Query: 556 aaccag 561 |||||| Sbjct: 136033 aaccag 136038 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 559 cagtaatgtattggcaggacatctatttggcataccactccgtggaacacattctcatgc 618 ||||||||| ||||| ||| |||| |||||||||||||| || ||||||||||||||||| Sbjct: 136275 cagtaatgttttggctggaaatctgtttggcataccacttcgcggaacacattctcatgc 136334 Query: 619 ttatgtcagctcatatatg 637 |||||| |||||||||||| Sbjct: 136335 ttatgttagctcatatatg 136353 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 278 tgctctgatgttgaagtgtactccattcctgagggctcggtagtctttccaaaagtgccc 337 ||||||||||| ||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 135552 tgctctgatgtggaagtgtactccattcctgagggttcagtggtttttccaaaagttcct 135611 Query: 338 ttgatgagagtcgagggtcctgttgctgt 366 |||||| |||| |||||||| |||||||| Sbjct: 135612 ttgatgcgagttgagggtccagttgctgt 135640
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 178 bits (90), Expect = 2e-41 Identities = 132/146 (90%) Strand = Plus / Plus Query: 100 gtttgacctgtactttaggaaaaatccatttggtggagagtttactgtttttgccggtct 159 |||||| |||||||| ||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 21321677 gtttgatctgtacttcaggaaaaatccatttggtggagaattcactgtttttgctggtct 21321736 Query: 160 tgaggaatgtataaaattcattgcaaactttaagttcacagaagatgagatttctttcct 219 ||| ||||| || || ||||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 21321737 tgaagaatgcattaagttcattgcaaattttaagttcacagaagatgacattttgttcct 21321796 Query: 220 gcagtcagtcatgccaatgtgtgagg 245 ||| |||||||||||||||||||||| Sbjct: 21321797 gcaatcagtcatgccaatgtgtgagg 21321822 Score = 168 bits (85), Expect = 1e-38 Identities = 94/97 (96%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21319046 acgaaccccatggcgacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 21319105 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 |||||||||||||||||||||||||||| ||||||| Sbjct: 21319106 tactggaaggccggcaagcacgccgaccgagccgtgt 21319142 Score = 143 bits (72), Expect = 8e-31 Identities = 120/136 (88%) Strand = Plus / Plus Query: 365 gtggttcaactacttgagactccatttgtaaatctgatcaactatgcctctttggtaacc 424 ||||| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 21322261 gtggtccaactacttgagacaccgtttgtaaatcttatcaattatgcctctttggtaaca 21322320 Query: 425 accaatgctgcacggcaccgtcatgttgctggaaagtcaaaggttctaatggaatttggt 484 || |||||||| | ||||| |||||||||||||| ||||| ||| || ||||||||||| Sbjct: 21322321 acaaatgctgcgagacaccgccatgttgctggaaaatcaaaagttttactggaatttggt 21322380 Query: 485 ttaagacgagcacagg 500 || ||||||||||||| Sbjct: 21322381 ttgagacgagcacagg 21322396 Score = 107 bits (54), Expect = 5e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 496 acaggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgc 555 |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 21322499 acaggggcctgacggtgcaataagtgcttcaaagtattgtttcatgggaggttttgatgc 21322558 Query: 556 aaccag 561 |||||| Sbjct: 21322559 aaccag 21322564 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 559 cagtaatgtattggcaggacatctatttggcataccactccgtggaacacattctcatgc 618 ||||||||| ||||| ||| |||| |||||||||||||| || ||||||||||||||||| Sbjct: 21322801 cagtaatgttttggctggaaatctgtttggcataccacttcgcggaacacattctcatgc 21322860 Query: 619 ttatgtcagctcatatatg 637 |||||| |||||||||||| Sbjct: 21322861 ttatgttagctcatatatg 21322879 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Plus Query: 278 tgctctgatgttgaagtgtactccattcctgagggctcggtagtctttccaaaagtgccc 337 ||||||||||| ||||||||||||||||||||||| || || || ||||||||||| || Sbjct: 21322078 tgctctgatgtggaagtgtactccattcctgagggttcagtggtttttccaaaagttcct 21322137 Query: 338 ttgatgagagtcgagggtcctgttgctgt 366 |||||| |||| |||||||| |||||||| Sbjct: 21322138 ttgatgcgagttgagggtccagttgctgt 21322166 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cccatggccacggcgctgctcacc 34 ||||||||||||||| |||||||| Sbjct: 24500662 cccatggccacggcggtgctcacc 24500685
>ref|XM_470349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2054 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 64 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 123 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 ||||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||| Sbjct: 124 tactggaaggccggcaagcacctcgaccgcgccgtctttgatctttacttccggaaaaat 183 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 || |||||||| || || || | || | || |||||||| ||||||| ||||||||| Sbjct: 184 ccctttggtggtgaattcaccatcttcggtggccttgaggagtgtataagattcattgct 243 Query: 185 aactttaagttcacaga 201 ||||| ||||| ||||| Sbjct: 244 aacttcaagttaacaga 260 Score = 58.0 bits (29), Expect = 4e-05 Identities = 230/297 (77%) Strand = Plus / Plus Query: 271 aattgattgctctgatgttgaagtgtactccattcctgagggctcggtagtctttccaaa 330 |||||| ||||| |||||||| || || |||| |||||||| || || || || || || Sbjct: 330 aattgactgctcagatgttgaggtttatgccatccctgagggttctgttgtattccctaa 389 Query: 331 agtgcccttgatgagagtcgagggtcctgttgctgtggttcaactacttgagactccatt 390 ||| || |||||| | | || || |||||||| || ||||||| ||||| || ||||| Sbjct: 390 agttccactgatgataattgaaggacctgttgcggttattcaacttcttgaaacaccatt 449 Query: 391 tgtaaatctgatcaactatgcctctttggtaaccaccaatgctgcacggcaccgtcatgt 450 | ||| |||| |||||||||| || ||||| || || || || ||| | ||| | | ||| Sbjct: 450 tttaagtctggtcaactatgcatccttggttactacaaacgcggcaagacacagacttgt 509 Query: 451 tgctggaaagtcaaaggttctaatggaatttggtttaagacgagcacaggggcctgatgg 510 || || ||||||||| | || | |||||||| | ||| | || |||||||||||||| Sbjct: 510 agcagggaagtcaaagaatttacttgaatttggacttagaagggcccaggggcctgatgg 569 Query: 511 cgcaataagtgcttcaaagtattgtttcatgggaggctttgatgcaaccagtaatgt 567 | ||| ||||| |||| ||||||| |||||||| ||||||||||| || ||||| Sbjct: 570 aggaatcagtgcatcaagatattgttatatgggaggatttgatgcaacaagcaatgt 626
>gb|AY214337.1| Oryza sativa nicotinate phosphoribosyltransferase-like protein mRNA, complete cds Length = 1992 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 88 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 147 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 ||||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||| Sbjct: 148 tactggaaggccggcaagcacctcgaccgcgccgtctttgatctttacttccggaaaaat 207 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 || |||||||| || || || | || | || |||||||| ||||||| ||||||||| Sbjct: 208 ccctttggtggtgaattcaccatcttcggtggccttgaggagtgtataagattcattgct 267 Query: 185 aactttaagttcacaga 201 ||||| ||||| ||||| Sbjct: 268 aacttcaagttaacaga 284 Score = 58.0 bits (29), Expect = 4e-05 Identities = 230/297 (77%) Strand = Plus / Plus Query: 271 aattgattgctctgatgttgaagtgtactccattcctgagggctcggtagtctttccaaa 330 |||||| ||||| |||||||| || || |||| |||||||| || || || || || || Sbjct: 354 aattgactgctcagatgttgaggtttatgccatccctgagggttctgttgtattccctaa 413 Query: 331 agtgcccttgatgagagtcgagggtcctgttgctgtggttcaactacttgagactccatt 390 ||| || |||||| | | || || |||||||| || ||||||| ||||| || ||||| Sbjct: 414 agttccactgatgataattgaaggacctgttgcggttattcaacttcttgaaacaccatt 473 Query: 391 tgtaaatctgatcaactatgcctctttggtaaccaccaatgctgcacggcaccgtcatgt 450 | ||| |||| |||||||||| || ||||| || || || || ||| | ||| | | ||| Sbjct: 474 tttaagtctggtcaactatgcatccttggttactacaaacgcggcaagacacagacttgt 533 Query: 451 tgctggaaagtcaaaggttctaatggaatttggtttaagacgagcacaggggcctgatgg 510 || || ||||||||| | || | |||||||| | ||| | || |||||||||||||| Sbjct: 534 agcagggaagtcaaagaatttacttgaatttggacttagaagggcccaggggcctgatgg 593 Query: 511 cgcaataagtgcttcaaagtattgtttcatgggaggctttgatgcaaccagtaatgt 567 | ||| ||||| |||| ||||||| |||||||| ||||||||||| || ||||| Sbjct: 594 aggaatcagtgcatcaagatattgttatatgggaggatttgatgcaacaagcaatgt 650
>dbj|AK121140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077G12, full insert sequence Length = 2081 Score = 137 bits (69), Expect = 5e-29 Identities = 165/197 (83%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 122 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 181 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgtttgacctgtactttaggaaaaat 124 ||||||||||||||||||||| ||||| |||||| ||||| || ||||| |||||||| Sbjct: 182 tactggaaggccggcaagcacctcgaccgcgccgtctttgatctttacttccggaaaaat 241 Query: 125 ccatttggtggagagtttactgtttttgccggtcttgaggaatgtataaaattcattgca 184 || |||||||| || || || | || | || |||||||| ||||||| ||||||||| Sbjct: 242 ccctttggtggtgaattcaccatcttcggtggccttgaggagtgtataagattcattgct 301 Query: 185 aactttaagttcacaga 201 ||||| ||||| ||||| Sbjct: 302 aacttcaagttaacaga 318 Score = 58.0 bits (29), Expect = 4e-05 Identities = 230/297 (77%) Strand = Plus / Plus Query: 271 aattgattgctctgatgttgaagtgtactccattcctgagggctcggtagtctttccaaa 330 |||||| ||||| |||||||| || || |||| |||||||| || || || || || || Sbjct: 388 aattgactgctcagatgttgaggtttatgccatccctgagggttctgttgtattccctaa 447 Query: 331 agtgcccttgatgagagtcgagggtcctgttgctgtggttcaactacttgagactccatt 390 ||| || |||||| | | || || |||||||| || ||||||| ||||| || ||||| Sbjct: 448 agttccactgatgataattgaaggacctgttgcggttattcaacttcttgaaacaccatt 507 Query: 391 tgtaaatctgatcaactatgcctctttggtaaccaccaatgctgcacggcaccgtcatgt 450 | ||| |||| |||||||||| || ||||| || || || || ||| | ||| | | ||| Sbjct: 508 tttaagtctggtcaactatgcatccttggttactacaaacgcggcaagacacagacttgt 567 Query: 451 tgctggaaagtcaaaggttctaatggaatttggtttaagacgagcacaggggcctgatgg 510 || || ||||||||| | || | |||||||| | ||| | || |||||||||||||| Sbjct: 568 agcagggaagtcaaagaatttacttgaatttggacttagaagggcccaggggcctgatgg 627 Query: 511 cgcaataagtgcttcaaagtattgtttcatgggaggctttgatgcaaccagtaatgt 567 | ||| ||||| |||| ||||||| |||||||| ||||||||||| || ||||| Sbjct: 628 aggaatcagtgcatcaagatattgttatatgggaggatttgatgcaacaagcaatgt 684
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 34887054 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 34887113 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||| |||||||| Sbjct: 34887114 tactggaaggccggcaagcacctcgaccgcgccgtgt 34887150 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 |||||||||||||| | ||| ||||| |||| ||||||| |||||||| ||||||||| Sbjct: 34888783 caggggcctgatggaggaatcagtgcatcaagatattgttatatgggaggatttgatgca 34888842 Query: 557 ac 558 || Sbjct: 34888843 ac 34888844
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 34977126 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 34977185 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||| |||||||| Sbjct: 34977186 tactggaaggccggcaagcacctcgaccgcgccgtgt 34977222 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 |||||||||||||| | ||| ||||| |||| ||||||| |||||||| ||||||||| Sbjct: 34978855 caggggcctgatggaggaatcagtgcatcaagatattgttatatgggaggatttgatgca 34978914 Query: 557 ac 558 || Sbjct: 34978915 ac 34978916
>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Minus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 128426 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 128367 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||| |||||||| Sbjct: 128366 tactggaaggccggcaagcacctcgaccgcgccgtgt 128330 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 |||||||||||||| | ||| ||||| |||| ||||||| |||||||| ||||||||| Sbjct: 126697 caggggcctgatggaggaatcagtgcatcaagatattgttatatgggaggatttgatgca 126638 Query: 557 ac 558 || Sbjct: 126637 ac 126636
>dbj|AK111243.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-180-D03, full insert sequence Length = 671 Score = 105 bits (53), Expect = 2e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| ||| ||||||||||||| | ||||||||| |||||||||||||| Sbjct: 136 acgaacccgatggtgacgccgctgctcaccgacctctaccagttcaccatggcctacgcc 195 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||| |||||||| Sbjct: 196 tactggaaggccggcaagcacctcgaccgcgccgtgt 232
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| |||| |||||||||||| | ||||||||| |||||| |||||| Sbjct: 18670123 acgaacccgatggtcacgcagctgctcaccgacctctaccagttcaccatggtctacgcg 18670182 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||||||||||| Sbjct: 18670183 tactggaaggccggcaagcaccttgaccacgccgtgt 18670219
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| |||| |||||||||||| | ||||||||| |||||| |||||| Sbjct: 18596349 acgaacccgatggtcacgcagctgctcaccgacctctaccagttcaccatggtctacgcg 18596408 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||||||||||| Sbjct: 18596409 tactggaaggccggcaagcaccttgaccacgccgtgt 18596445
>emb|AL845345.9|CNS08CB7 Oryza sativa chromosome 12, . BAC OSJNBa0023G11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 180599 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 5 acgaaccccatggccacggcgctgctcaccgatcagtaccagttctccatggcctacgcc 64 |||||||| |||| |||| |||||||||||| | ||||||||| |||||| |||||| Sbjct: 103575 acgaacccgatggtcacgcagctgctcaccgacctctaccagttcaccatggtctacgcg 103634 Query: 65 tactggaaggccggcaagcacgccgaccacgccgtgt 101 ||||||||||||||||||||| ||||||||||||| Sbjct: 103635 tactggaaggccggcaagcaccttgaccacgccgtgt 103671
>ref|NM_119858.2| Arabidopsis thaliana nicotinate phosphoribosyltransferase AT4G36940 mRNA, complete cds Length = 2131 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 492 gagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttg 551 |||| ||||| || ||||| |||||||| || ||||||||||| | | | ||||| |||| Sbjct: 631 gagctcagggacccgatggtgcaataagcgcatcaaagtattgctaccttggaggttttg 690 Query: 552 atgcaaccagtaatgtattggcaggacatctatttggcataccactccgtggaacacatt 611 ||||||| |||||||| || ||| | || ||||| ||||| |||||||| || |||| Sbjct: 691 atgcaacaagtaatgttgcagcgggaaaactgtttgggatacccctccgtggtactcatt 750 Query: 612 ctcatgcttatgtcagctcatatatgagccttgatga 648 | ||||||| ||| ||||||| |||||||||||||| Sbjct: 751 cccatgcttttgttagctcattcatgagccttgatga 787
>gb|AY093004.1| Arabidopsis thaliana unknown protein (At4g36940) mRNA, complete cds Length = 1895 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 492 gagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttg 551 |||| ||||| || ||||| |||||||| || ||||||||||| | | | ||||| |||| Sbjct: 599 gagctcagggacccgatggtgcaataagcgcatcaaagtattgctaccttggaggttttg 658 Query: 552 atgcaaccagtaatgtattggcaggacatctatttggcataccactccgtggaacacatt 611 ||||||| |||||||| || ||| | || ||||| ||||| |||||||| || |||| Sbjct: 659 atgcaacaagtaatgttgcagcgggaaaactgtttgggatacccctccgtggtactcatt 718 Query: 612 ctcatgcttatgtcagctcatatatgagccttgatga 648 | ||||||| ||| ||||||| |||||||||||||| Sbjct: 719 cccatgcttttgttagctcattcatgagccttgatga 755
>emb|BX826771.1|CNS0A36K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZH07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1792 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 492 gagcacaggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttg 551 |||| ||||| || ||||| |||||||| || ||||||||||| | | | ||||| |||| Sbjct: 584 gagctcagggacccgatggtgcaataagcgcatcaaagtattgctaccttggaggttttg 643 Query: 552 atgcaaccagtaatgtattggcaggacatctatttggcataccactccgtggaacacatt 611 ||||||| |||||||| || ||| | || ||||| ||||| |||||||| || |||| Sbjct: 644 atgcaacaagtaatgttgcagcgggaaaactgtttgggatacccctccgtggtactcatt 703 Query: 612 ctcatgcttatgtcagctcatatatgagccttgatga 648 | ||||||| ||| ||||||| |||||||||||||| Sbjct: 704 cccatgcttttgttagctcattcatgagccttgatga 740
>gb|AY214336.1| Medicago truncatula nicotinate phosphoribosyltransferase-like protein mRNA, complete cds Length = 2018 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 582 tatttggcataccactccgtggaacacattctcatgcttatgtcagctcatatatgagcc 641 ||||||| || || || ||||| |||||||||||||||| || |||||||||||||||| Sbjct: 670 tatttgggatcccgcttcgtggtacacattctcatgctttcgttagctcatatatgagcc 729 Query: 642 ttgatgagat 651 |||||||||| Sbjct: 730 ttgatgagat 739 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 239 tgtgaggattcattctttgattatctccgtggaattgattgctctgatgttga 291 ||||||||| |||||||||| ||||| | ||| |||| |||||||||||||| Sbjct: 327 tgtgaggatgcattctttgactatcttagaggacttgactgctctgatgttga 379
>ref|NM_127906.3| Arabidopsis thaliana nicotinate phosphoribosyltransferase AT2G23420 mRNA, complete cds Length = 2011 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Plus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 ||||| || ||||| |||||||| || ||||| ||||| | | | ||||| ||||||||| Sbjct: 601 cagggtccggatggtgcaataagcgcatcaaaatattgctaccttggaggttttgatgca 660 Query: 557 accagtaatgtattggcaggacatctatttggcataccactccgtggaacacattctcat 616 || ||||||||| || ||| | || ||||| || || || ||||||||||| |||||| Sbjct: 661 acaagtaatgtagcagctggaaaactttttgggattcctcttcgtggaacacactctcat 720 Query: 617 gcttatgtcagctcat 632 |||||||| ||||||| Sbjct: 721 gcttatgttagctcat 736
>gb|AY050994.1| Arabidopsis thaliana At2g23420 mRNA sequence Length = 1967 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Plus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 ||||| || ||||| |||||||| || ||||| ||||| | | | ||||| ||||||||| Sbjct: 537 cagggtccggatggtgcaataagcgcatcaaaatattgctaccttggaggttttgatgca 596 Query: 557 accagtaatgtattggcaggacatctatttggcataccactccgtggaacacattctcat 616 || ||||||||| || ||| | || ||||| || || || ||||||||||| |||||| Sbjct: 597 acaagtaatgtagcagctggaaaactttttgggattcctcttcgtggaacacactctcat 656 Query: 617 gcttatgtcagctcat 632 |||||||| ||||||| Sbjct: 657 gcttatgttagctcat 672
>gb|BT001932.1| Arabidopsis thaliana clone C105382 unknown protein (At2g23420) mRNA, complete cds Length = 1705 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Plus Query: 497 caggggcctgatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgca 556 ||||| || ||||| |||||||| || ||||| ||||| | | | ||||| ||||||||| Sbjct: 547 cagggtccggatggtgcaataagcgcatcaaaatattgctaccttggaggttttgatgca 606 Query: 557 accagtaatgtattggcaggacatctatttggcataccactccgtggaacacattctcat 616 || ||||||||| || ||| | || ||||| || || || ||||||||||| |||||| Sbjct: 607 acaagtaatgtagcagctggaaaactttttgggattcctcttcgtggaacacactctcat 666 Query: 617 gcttatgtcagctcat 632 |||||||| ||||||| Sbjct: 667 gcttatgttagctcat 682
>gb|DQ226762.1| Boechera divaricarpa isolate SLW-D-E03 mRNA sequence Length = 580 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 608 cattctcatgcttatgtcagctcatatatgagccttgatgagat 651 ||||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 4 cattctcatgcttttgttagctcattcatgagccttgatgagat 47
>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete sequence Length = 123360 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 599 cgtggaacacattctcatgcttatgtcagctcat 632 ||||||||||| |||||||||||||| ||||||| Sbjct: 24292 cgtggaacacactctcatgcttatgttagctcat 24325
>emb|CR956354.1| Wallaby DNA sequence from clone GRWB-143H14, complete sequence Length = 120769 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Plus Query: 107 ctgtactttaggaaaaatccatttggtggaga 138 ||||||||||||||||||| ||||||||||| Sbjct: 10053 ctgtactttaggaaaaatcactttggtggaga 10084
>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome Length = 1884661 Score = 48.1 bits (24), Expect = 0.037 Identities = 24/24 (100%) Strand = Plus / Minus Query: 545 ggctttgatgcaaccagtaatgta 568 |||||||||||||||||||||||| Sbjct: 1544966 ggctttgatgcaaccagtaatgta 1544943
>gb|AC144431.11| Medicago truncatula clone mth2-21i14, complete sequence Length = 154482 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 425 accaatgctgcacggcaccgtcatgttgctggaaa 459 |||||||||||| |||||||| |||||||||||| Sbjct: 39583 accaatgctgcaaggcaccgttttgttgctggaaa 39617
>gb|AC140415.3| Mus musculus BAC clone RP23-127A20 from 13, complete sequence Length = 221245 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 362 gctgtggttcaactacttgagac 384 ||||||||||||||||||||||| Sbjct: 94835 gctgtggttcaactacttgagac 94857
>emb|CR388000.2| Wallaby DNA sequence from clone XX-125B16, complete sequence Length = 56974 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 99 tgtttgacctgtactttaggaaaaat 124 |||| ||||||||||||||||||||| Sbjct: 47930 tgttggacctgtactttaggaaaaat 47955
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 506 gatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgcaac 558 ||||| |||||||| || ||||||||||| | | | ||||| ||||||||||| Sbjct: 149873 gatggtgcaataagcgcatcaaagtattgctaccttggaggttttgatgcaac 149821
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 506 gatggcgcaataagtgcttcaaagtattgtttcatgggaggctttgatgcaac 558 ||||| |||||||| || ||||||||||| | | | ||||| ||||||||||| Sbjct: 105361 gatggtgcaataagcgcatcaaagtattgctaccttggaggttttgatgcaac 105413
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 473 atggaatttggtttaagacgagcacaggggcctgatg 509 |||||||||||||||||||| || || || ||||||| Sbjct: 949138 atggaatttggtttaagacgggcccaaggacctgatg 949174
>emb|BX005180.6| Mouse DNA sequence from clone RP23-414F9 on chromosome X, complete sequence Length = 148346 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 tttggtggagagtttactgtt 148 ||||||||||||||||||||| Sbjct: 10974 tttggtggagagtttactgtt 10954
>ref|XM_602084.2| PREDICTED: Bos taurus similar to Heparan sulfate 2-O-sulfotransferase 1 (2-O-sulfotransferase) (2OST) (LOC523780), partial mRNA Length = 762 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 412 aagatgagatttctttcctg 393
>gb|AC147042.3| Pan troglodytes BAC clone RP43-121P5 from 7, complete sequence Length = 143299 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tttaggaaaaatccatttgg 132 |||||||||||||||||||| Sbjct: 98648 tttaggaaaaatccatttgg 98667
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 gccgaccacgccgtgtttga 105 |||||||||||||||||||| Sbjct: 3188191 gccgaccacgccgtgtttga 3188210
>ref|NM_012262.2| Homo sapiens heparan sulfate 2-O-sulfotransferase 1 (HS2ST1), mRNA Length = 6708 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1219 aagatgagatttctttcctg 1200
>gb|AF189005.5| Homo sapiens chromosome 8 clone CTA-396D5 map q12.1, complete sequence Length = 120719 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 aaactttaagttcacagaag 203 |||||||||||||||||||| Sbjct: 20682 aaactttaagttcacagaag 20701
>gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosome 14, complete sequence Length = 192163 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 gtgtgaggattcattctttg 257 |||||||||||||||||||| Sbjct: 87596 gtgtgaggattcattctttg 87615
>emb|Z74036.2|CEF55C10 Caenorhabditis elegans Cosmid F55C10, complete sequence Length = 22151 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ttcattgcaaactttaagttcaca 199 ||||||||||||||| |||||||| Sbjct: 9393 ttcattgcaaactttgagttcaca 9370
>ref|XM_814138.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510431.120) partial mRNA Length = 1182 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tgatgttgaagtgtactcca 302 |||||||||||||||||||| Sbjct: 828 tgatgttgaagtgtactcca 809
>ref|XM_537087.2| PREDICTED: Canis familiaris similar to Heparan sulfate 2-O-sulfotransferase 1 (2-O-sulfotransferase) (2OST) (LOC479963), mRNA Length = 1435 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1153 aagatgagatttctttcctg 1134
>gb|AC006378.2| Homo sapiens BAC clone RP11-455I9 from 7, complete sequence Length = 102598 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagttcacagaagatgagat 210 |||||||||||||||||||| Sbjct: 97562 aagttcacagaagatgagat 97543
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 aggccggcaagcacgccgaccacg 95 |||| ||||||||||||||||||| Sbjct: 1804561 aggcaggcaagcacgccgaccacg 1804538
>emb|AL157892.23| Human DNA sequence from clone RP11-309N24 on chromosome 10 Contains a novel gene, complete sequence Length = 25342 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 tgtataaaattcattgcaaa 186 |||||||||||||||||||| Sbjct: 10035 tgtataaaattcattgcaaa 10054
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 ggccacggcgctgctcaccg 35 |||||||||||||||||||| Sbjct: 2086806 ggccacggcgctgctcaccg 2086825
>emb|X66592.1|PAPHAC1C2 Pseudomonas aeruginosa phaC1, phaC2 and phaD genes Length = 7311 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aggccggcaagcacgccgac 91 |||||||||||||||||||| Sbjct: 2794 aggccggcaagcacgccgac 2813
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ctccatggcctacgcctact 68 |||||||||||||||||||| Sbjct: 97615 ctccatggcctacgcctact 97634
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cccatggccacggcgctgctcacc 34 ||||||||||||||| |||||||| Sbjct: 60293 cccatggccacggcggtgctcacc 60316
>emb|CR860679.1| Pongo pygmaeus mRNA; cDNA DKFZp459F0115 (from clone DKFZp459F0115) Length = 3049 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1295 aagatgagatttctttcctg 1276
>emb|CR860431.1| Pongo pygmaeus mRNA; cDNA DKFZp459E141 (from clone DKFZp459E141) Length = 4596 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1224 aagatgagatttctttcctg 1205
>gb|AC110013.5| Homo sapiens chromosome 8, clone CTA-396D5, complete sequence Length = 120724 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaactttaagttcacagaag 203 |||||||||||||||||||| Sbjct: 100041 aaactttaagttcacagaag 100022
>gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete sequence Length = 132878 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 tcaactacttgagactccatttgt 393 ||||| |||||||||||||||||| Sbjct: 14822 tcaaccacttgagactccatttgt 14845
>gb|AE011759.1| Xanthomonas axonopodis pv. citri str. 306, section 137 of 469 of the complete genome Length = 10210 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tggccacggcgctgctcacc 34 |||||||||||||||||||| Sbjct: 4125 tggccacggcgctgctcacc 4106
>dbj|AK023260.1| Homo sapiens cDNA FLJ13198 fis, clone NT2RP3004454, highly similar to Homo sapiens mRNA for KIAA0448 protein Length = 2951 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1219 aagatgagatttctttcctg 1200
>gb|AC027698.5| Homo sapiens chromosome 8, clone RP11-648L3, complete sequence Length = 97695 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aaactttaagttcacagaag 203 |||||||||||||||||||| Sbjct: 12126 aaactttaagttcacagaag 12107
>gb|AC108460.5| Homo sapiens chromosome 11, clone CTD-2302A16, complete sequence Length = 149148 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 agtcagtcatgccaatgtgtgagg 245 |||||||||||| ||||||||||| Sbjct: 116435 agtcagtcatgcaaatgtgtgagg 116412
>gb|AC021436.8| Homo sapiens chromosome , clone RP11-121C18, complete sequence Length = 180765 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 222 agtcagtcatgccaatgtgtgagg 245 |||||||||||| ||||||||||| Sbjct: 176824 agtcagtcatgcaaatgtgtgagg 176801
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 tccgtggaattgattgctct 283 |||||||||||||||||||| Sbjct: 3527704 tccgtggaattgattgctct 3527723
>gb|AC098872.5| Homo sapiens BAC clone RP11-773P9 from 2, complete sequence Length = 178804 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 tgatggcgcaataagtgcttcaaa 528 ||||||| |||||||||||||||| Sbjct: 120384 tgatggcacaataagtgcttcaaa 120361
>gb|AC147324.3| Pan troglodytes BAC clone RP43-41B9 from chromosome 7, complete sequence Length = 163009 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagttcacagaagatgagat 210 |||||||||||||||||||| Sbjct: 87451 aagttcacagaagatgagat 87432
>gb|AE004919.1| Pseudomonas aeruginosa PAO1, section 480 of 529 of the complete genome Length = 11267 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 aggccggcaagcacgccgac 91 |||||||||||||||||||| Sbjct: 2396 aggccggcaagcacgccgac 2415
>gb|AC009235.4|AC009235 Homo sapiens BAC clone RP11-392F24 from Y, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ttgctctgatgttgaagtgt 296 |||||||||||||||||||| Sbjct: 29074 ttgctctgatgttgaagtgt 29093
>gb|AC026254.9| Homo sapiens chromosome 17, clone RP11-173M1, complete sequence Length = 154906 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 tgcttcaaagtattgtttca 539 |||||||||||||||||||| Sbjct: 49924 tgcttcaaagtattgtttca 49905
>dbj|AB007917.1| Homo sapiens mRNA for KIAA0448 protein, partial cds Length = 6632 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1143 aagatgagatttctttcctg 1124
>dbj|AK072099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G18, full insert sequence Length = 2456 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cccatggccacggcgctgctcacc 34 ||||||||||||||| |||||||| Sbjct: 222 cccatggccacggcggtgctcacc 245
>gb|AY104971.1| Zea mays PCO075622 mRNA sequence Length = 593 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 tggccacggcgctgctcacc 34 |||||||||||||||||||| Sbjct: 146 tggccacggcgctgctcacc 127
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 tccgtggaattgattgctct 283 |||||||||||||||||||| Sbjct: 761778 tccgtggaattgattgctct 761759
>dbj|AK113399.1| Ciona intestinalis cDNA, clone:ciad048l21, full insert sequence Length = 1442 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 tcaaaggttctaatggaatt 480 |||||||||||||||||||| Sbjct: 1263 tcaaaggttctaatggaatt 1244
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 cccatggccacggcgctgctcacc 34 ||||||||||||||| |||||||| Sbjct: 93984 cccatggccacggcggtgctcacc 94007
>emb|AL929086.7| Zebrafish DNA sequence from clone CH211-130K1 in linkage group 3, complete sequence Length = 174740 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 212 tctttcctgcagtcagtcatgccaatgtgtga 243 ||||||||||| ||||| |||| ||||||||| Sbjct: 64104 tctttcctgcactcagtaatgcaaatgtgtga 64135
>dbj|AB024568.1| Homo sapiens mRNA for heparan sulfate 2-sulfotransferase, complete cds Length = 2185 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 aagatgagatttctttcctg 220 |||||||||||||||||||| Sbjct: 1215 aagatgagatttctttcctg 1196 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,915,289 Number of Sequences: 3902068 Number of extensions: 5915289 Number of successful extensions: 103984 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103453 Number of HSP's gapped (non-prelim): 528 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)