Clone Name | bah63b03 |
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Clone Library Name | barley_pub |
>gb|AF542188.1| Triticum aestivum cyc07 mRNA, complete cds Length = 820 Score = 432 bits (218), Expect = e-118 Identities = 440/514 (85%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaagaaaa 122 ||||||||||||||||||||||||||||||| || || ||||||||||||| ||||| Sbjct: 65 ccatggcggtcggcaagaacaagcgcatctccaaggggaggaagggaagcaagaagaagg 124 Query: 123 cggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaaca 182 | |||||||| |||||||||||| | ||||||||||| ||||||||| | |||||| || Sbjct: 125 ccgtcgatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctgttcacca 184 Query: 183 cccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagg 242 ||||||| |||||||||||||||| |||||||| ||||| ||||||||||| || |||| Sbjct: 185 gccgcaacgtcggcaagaccctcgtgtccaggacgcagggtaccaagattgcctcagagg 244 Query: 243 gtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggaccagg 302 |||| |||||||| || || || || || | || || || ||| ||||||||||||| Sbjct: 245 gtctgaagcacagggtgttcgaagtatctctagctgatcttcagaacgatgaggaccagg 304 Query: 303 ctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaact 362 | | ||||||||||||||| ||||| |||||||||||||| | |||||| |||||||||| Sbjct: 305 cctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaact 364 Query: 363 tttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacac 422 | ||||| ||||| |||||||| |||||||| || || ||||| |||||||||||||||| Sbjct: 365 tctggggcatggacttcaccactgacaagctcaggtctcttgtgaggaagtggcagacac 424 Query: 423 taattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgca 482 | |||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||| || Sbjct: 425 tcattgaggctcatgtggatgtgaagaccactgacaactacatgctccgcatgttcgcca 484 Query: 483 ttggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagcc 542 |||||||||| |||||||| || ||||| ||||| || ||||||||||| || || || | Sbjct: 485 ttggcttcaccaagagacgcccaaaccaggtgaagcgcacttgctatgcccaagcaagtc 544 Query: 543 agatcagacagattcgccggaagatggttgagat 576 ||||||||||||| ||||| |||||||||||||| Sbjct: 545 agatcagacagatccgccgcaagatggttgagat 578
>gb|AY290725.1| Triticum aestivum ribosomal protein S3a-like mRNA, partial sequence Length = 885 Score = 394 bits (199), Expect = e-106 Identities = 436/515 (84%), Gaps = 1/515 (0%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgcatctcgaaaggtc-ggaagggaagcaaaaagaaa 121 ||||||||||||||||||||||||||||||| || || ||||||||||||| ||||| Sbjct: 66 ccatggcggtcggcaagaacaagcgcatctccaagggggaggaagggaagcaagaagaag 125 Query: 122 acggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaac 181 | |||||||| |||||||||||| | ||||||||||| ||||||||| | |||||| | Sbjct: 126 gccgtcgatccgttcaccaagaagcagtggtatgacatcaaggcgccgctgctgttcacc 185 Query: 182 acccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgag 241 | ||||||| |||||||||||||||| |||||||| ||||| |||||||||| || ||| Sbjct: 186 agccgcaacgtcggcaagaccctcgtgtccaggacgcagggtaccaagattgnctcagag 245 Query: 242 ggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggaccag 301 ||||| ||||||| || || || || || | || || || ||| |||||||||||| Sbjct: 246 ggtctgaagcacanggtgttcgaagtatctctagctgatcttcagaacgatgaggaccag 305 Query: 302 gctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaac 361 || | ||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||| Sbjct: 306 gcctacaggaagatcagactccgtgctgaggatgtgcaagggatgaatgtcctcacaaac 365 Query: 362 ttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagaca 421 || ||||| ||||| |||||||| |||||||| | || ||||| ||||||||||||||| Sbjct: 366 ttctggggcatggacttcaccactgacaagctcaagtctcttgtgaggaagtggcagaca 425 Query: 422 ctaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgc 481 || |||||||| ||||| ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 426 ctcattgaggctcatgtggatgtgaagaccactgacaactacatgctccgcatgttcgcc 485 Query: 482 attggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagc 541 ||||||||||| |||||||| || ||||| ||||| || ||||||||||| || || || Sbjct: 486 attggcttcaccaagagacgcccaaaccaggtgaagcgcacttgctatgcccaagcnagt 545 Query: 542 cagatcagacagattcgccggaagatggttgagat 576 |||||||||||||| ||||| ||||||| |||||| Sbjct: 546 cagatcagacagatccgccgcaagatggntgagat 580
>dbj|D26060.1|RICT151 Oryza sativa mRNA for cyc07, complete cds Length = 1065 Score = 353 bits (178), Expect = 4e-94 Identities = 430/514 (83%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaaga 119 |||||||||| || || ||||||||||||||||| || || ||||||| ||| |||| Sbjct: 91 cagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatccaagaaga 150 Query: 120 aaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttca 179 | || ||||||||||| | ||||||||||||||||| || ||||| ||| || |||||| Sbjct: 151 agaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttca 210 Query: 180 acacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctg 239 | || |||||||||||||||||||| |||||||||||||| || |||||||| |||| Sbjct: 211 atgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagattgcttctg 270 Query: 240 agggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggacc 299 |||| || ||||| ||||| |||||||| ||||| || || |||||| |||||||| | Sbjct: 271 agggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgatgaggatc 330 Query: 300 aggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaa 359 |||| | ||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 331 aggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcacca 390 Query: 360 acttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcaga 419 |||||||||| ||| || || ||||| ||||| ||||||||||| | ||||||||||| Sbjct: 391 acttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaagtggcaga 450 Query: 420 cactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttct 479 |||| |||||||| ||||| ||||| || ||||| ||| |||||||| || ||||||| Sbjct: 451 cactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgtctgttct 510 Query: 480 gcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcga 539 | || |||||||| ||| | || || ||||| ||||| |||||||||||||||| |||| Sbjct: 511 gtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgctcaagcga 570 Query: 540 gccagatcagacagattcgccggaagatggttga 573 | ||||||||||||||||| || ||||||||||| Sbjct: 571 gtcagatcagacagattcgtcgcaagatggttga 604
>dbj|AK104243.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D02, full insert sequence Length = 1032 Score = 353 bits (178), Expect = 4e-94 Identities = 430/514 (83%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaaga 119 |||||||||| || || ||||||||||||||||| || || ||||||| ||| |||| Sbjct: 67 cagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatccaagaaga 126 Query: 120 aaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttca 179 | || ||||||||||| | ||||||||||||||||| || ||||| ||| || |||||| Sbjct: 127 agaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttca 186 Query: 180 acacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctg 239 | || |||||||||||||||||||| |||||||||||||| || |||||||| |||| Sbjct: 187 atgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagattgcttctg 246 Query: 240 agggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggacc 299 |||| || ||||| ||||| |||||||| ||||| || || |||||| |||||||| | Sbjct: 247 agggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgatgaggatc 306 Query: 300 aggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaa 359 |||| | ||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 307 aggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcacca 366 Query: 360 acttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcaga 419 |||||||||| ||| || || ||||| ||||| ||||||||||| | ||||||||||| Sbjct: 367 acttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaagtggcaga 426 Query: 420 cactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttct 479 |||| |||||||| ||||| ||||| || ||||| ||| |||||||| || ||||||| Sbjct: 427 cactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgtctgttct 486 Query: 480 gcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcga 539 | || |||||||| ||| | || || ||||| ||||| |||||||||||||||| |||| Sbjct: 487 gtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgctcaagcga 546 Query: 540 gccagatcagacagattcgccggaagatggttga 573 | ||||||||||||||||| || ||||||||||| Sbjct: 547 gtcagatcagacagattcgtcgcaagatggttga 580
>dbj|AK069251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013H23, full insert sequence Length = 1097 Score = 353 bits (178), Expect = 4e-94 Identities = 430/514 (83%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaaga 119 |||||||||| || || ||||||||||||||||| || || ||||||| ||| |||| Sbjct: 68 cagccatggccgtaggtaagaacaagcgcatctccaaggggaagaagggatccaagaaga 127 Query: 120 aaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttca 179 | || ||||||||||| | ||||||||||||||||| || ||||| ||| || |||||| Sbjct: 128 agaccgtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttca 187 Query: 180 acacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctg 239 | || |||||||||||||||||||| |||||||||||||| || |||||||| |||| Sbjct: 188 atgtgcggaacatcggcaagaccctcgtgtccaggacacagggtacaaagattgcttctg 247 Query: 240 agggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggacc 299 |||| || ||||| ||||| |||||||| ||||| || || |||||| |||||||| | Sbjct: 248 agggcctaaagcatagagtgtttgaggtctccttagctgatctccagaacgatgaggatc 307 Query: 300 aggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaa 359 |||| | ||||||||||||||||||||| |||||||||||||| ||||| || ||||| | Sbjct: 308 aggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaagaacgtgctcacca 367 Query: 360 acttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcaga 419 |||||||||| ||| || || ||||| ||||| ||||||||||| | ||||||||||| Sbjct: 368 acttttggggcatgtcgtttactaccgataagctcagatcacttgttaagaagtggcaga 427 Query: 420 cactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttct 479 |||| |||||||| ||||| ||||| || ||||| ||| |||||||| || ||||||| Sbjct: 428 cactgattgaggctcatgtggatgtcaaaaccacagacggctacatgctgcgtctgttct 487 Query: 480 gcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcga 539 | || |||||||| ||| | || || ||||| ||||| |||||||||||||||| |||| Sbjct: 488 gtatcggcttcaccaagcggcggcctaaccaggtgaagaggacttgctatgctcaagcga 547 Query: 540 gccagatcagacagattcgccggaagatggttga 573 | ||||||||||||||||| || ||||||||||| Sbjct: 548 gtcagatcagacagattcgtcgcaagatggttga 581
>dbj|AK104699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C03, full insert sequence Length = 942 Score = 331 bits (167), Expect = 1e-87 Identities = 395/471 (83%) Strand = Plus / Plus Query: 103 gaagggaagcaaaaagaaaacggtcgatcccttcaccaagaaggactggtatgacataaa 162 ||||||| ||| ||||| || ||||||||||| | ||||||||||||||||| || || Sbjct: 20 gaagggatccaagaagaagaccgtcgatccctttgctaagaaggactggtatgatatcaa 79 Query: 163 ggcgccgacgttgttcaacacccgcaacatcggcaagaccctcgtctccaggacacaggg 222 ||| ||| || ||||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 80 ggccccgtcggtgttcaatgtgcggaacatcggcaagaccctcgtgtccaggacacaggg 139 Query: 223 gaccaagattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacct 282 || |||||||| |||||||| || ||||| ||||| |||||||| ||||| || || || Sbjct: 140 tacaaagattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatct 199 Query: 283 ccagggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaagg 342 |||| |||||||| ||||| | ||||||||||||||||||||| |||||||||||||| Sbjct: 200 ccagaacgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagg 259 Query: 343 aaagaatgttctcacaaacttttggggtatggatttcaccaccgacaagcttagatcact 402 ||||| || ||||| ||||||||||| ||| || || ||||| ||||| |||||||| Sbjct: 260 gaagaacgtgctcaccaacttttggggcatgtcgtttactaccgataagctcagatcact 319 Query: 403 tgtaaggaagtggcagacactaattgaggcccatgttgatgttaagaccactgacaatta 462 ||| | ||||||||||||||| |||||||| ||||| ||||| || ||||| ||| || Sbjct: 320 tgttaagaagtggcagacactgattgaggctcatgtggatgtcaaaaccacagacggcta 379 Query: 463 catgctccggctgttctgcattggcttcactaagagacgtcccaaccaagtgaaacggac 522 |||||| || |||||||| || |||||||| ||| | || || ||||| ||||| |||| Sbjct: 380 catgctgcgtctgttctgtatcggcttcaccaagcggcggcctaaccaggtgaagaggac 439 Query: 523 ttgctatgctcaggcgagccagatcagacagattcgccggaagatggttga 573 |||||||||||| ||||| ||||||||||||||||| || ||||||||||| Sbjct: 440 ttgctatgctcaagcgagtcagatcagacagattcgtcgcaagatggttga 490
>ref|XM_464995.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1063 Score = 313 bits (158), Expect = 3e-82 Identities = 428/518 (82%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 30 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 89 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttc 178 || || ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 90 aagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttc 149 Query: 179 aacacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatct 238 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 150 tccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatct 209 Query: 239 gagggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggac 298 |||||||| ||||| | || ||||| || |||||||| || || ||| ||| ||||| Sbjct: 210 gagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggat 269 Query: 299 caggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcaca 358 ||||||| ||||||| | ||||||||||| |||||||| || || | |||||| ||||| Sbjct: 270 caggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacg 329 Query: 359 aacttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcag 418 || || ||||| ||| ||| ||||| ||||| ||||| || | || | ||| ||||| Sbjct: 330 aatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaa 389 Query: 419 acactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttc 478 ||| | ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 390 acattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttt 449 Query: 479 tgcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcg 538 |||||||| ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct: 450 tgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggct 509 Query: 539 agccagatcagacagattcgccggaagatggttgagat 576 ||||||||| | ||||| |||||||||||||||||||| Sbjct: 510 agccagatccggcagatccgccggaagatggttgagat 547
>ref|XM_506775.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1115_D03.49 mRNA Length = 1171 Score = 313 bits (158), Expect = 3e-82 Identities = 428/518 (82%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 66 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 125 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttc 178 || || ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 126 aagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttc 185 Query: 179 aacacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatct 238 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 186 tccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatct 245 Query: 239 gagggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggac 298 |||||||| ||||| | || ||||| || |||||||| || || ||| ||| ||||| Sbjct: 246 gagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggat 305 Query: 299 caggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcaca 358 ||||||| ||||||| | ||||||||||| |||||||| || || | |||||| ||||| Sbjct: 306 caggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacg 365 Query: 359 aacttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcag 418 || || ||||| ||| ||| ||||| ||||| ||||| || | || | ||| ||||| Sbjct: 366 aatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaa 425 Query: 419 acactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttc 478 ||| | ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 426 acattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttt 485 Query: 479 tgcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcg 538 |||||||| ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct: 486 tgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggct 545 Query: 539 agccagatcagacagattcgccggaagatggttgagat 576 ||||||||| | ||||| |||||||||||||||||||| Sbjct: 546 agccagatccggcagatccgccggaagatggttgagat 583
>dbj|AK099131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048M05, full insert sequence Length = 1063 Score = 305 bits (154), Expect = 9e-80 Identities = 427/518 (82%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || ||||||||| || | ||||| || || ||||||| ||||| ||| Sbjct: 30 gcagccatggccgtgggcaagaacgagaggatctccaagggcaggaagggcagcaagaag 89 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttc 178 || || ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 90 aagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttc 149 Query: 179 aacacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatct 238 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 150 tccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatct 209 Query: 239 gagggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggac 298 |||||||| ||||| | || ||||| || |||||||| || || ||| ||| ||||| Sbjct: 210 gagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggat 269 Query: 299 caggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcaca 358 ||||||| ||||||| | ||||||||||| |||||||| || || | |||||| ||||| Sbjct: 270 caggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacg 329 Query: 359 aacttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcag 418 || || ||||| ||| ||| ||||| ||||| ||||| || | || | ||| ||||| Sbjct: 330 aatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaa 389 Query: 419 acactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttc 478 ||| | ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 390 acattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttt 449 Query: 479 tgcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcg 538 |||||||| ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct: 450 tgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggct 509 Query: 539 agccagatcagacagattcgccggaagatggttgagat 576 ||||||||| | ||||| |||||||||||||||||||| Sbjct: 510 agccagatccggcagatccgccggaagatggttgagat 547
>dbj|AK059647.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C03, full insert sequence Length = 1171 Score = 305 bits (154), Expect = 9e-80 Identities = 427/518 (82%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 66 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 125 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttc 178 || || ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 126 aagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttc 185 Query: 179 aacacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatct 238 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 186 tccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatct 245 Query: 239 gagggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggac 298 |||||||| ||||| | || ||||| || |||||||| || || ||| ||| ||||| Sbjct: 246 gagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggat 305 Query: 299 caggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcaca 358 ||||||| ||||||| | ||||||||||| |||||||| || || | |||||| ||||| Sbjct: 306 caggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacg 365 Query: 359 aacttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcag 418 || || ||||| ||| ||| ||||| ||||| ||||| || | || | ||| ||||| Sbjct: 366 aatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaa 425 Query: 419 acactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttc 478 ||| | ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 426 acattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttt 485 Query: 479 tgcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcg 538 |||||||| ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct: 486 tgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggct 545 Query: 539 agccagatcagacagattcgccggaagatggttgagat 576 ||||||||| | ||||| | |||||||||||||||||| Sbjct: 546 agccagatccggcagatcctccggaagatggttgagat 583
>gb|AF052503.1|AF052503 Oryza sativa S-phase-specific ribosomal protein (RSPSP94) mRNA, complete cds Length = 1027 Score = 276 bits (139), Expect = 8e-71 Identities = 426/519 (82%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 27 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 86 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttc 178 || || ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 87 aagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttc 146 Query: 179 aacacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatct 238 | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 147 tccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatct 206 Query: 239 gagggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggac 298 |||||||| ||||| | || ||||| || |||||||| || || | | ||| ||||| Sbjct: 207 gagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcggaatgacgaggat 266 Query: 299 caggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcaca 358 ||||||| ||||||| | ||||||||||| |||||||| || || | |||||| ||||| Sbjct: 267 caggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacg 326 Query: 359 aacttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcag 418 || || ||||| ||| ||| ||||| ||||| ||||| || | || | ||| ||||| Sbjct: 327 aatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaa 386 Query: 419 acactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttc 478 ||| | ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| Sbjct: 387 acattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttt 446 Query: 479 tgcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcg 538 |||||||| ||||| ||| | || || || || ||||| || || || || ||||||| Sbjct: 447 tgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcagg-t 505 Query: 539 agccagatcagacagat-tcgccggaagatggttgagat 576 ||||||||| | ||||| |||||||||||||||||||| Sbjct: 506 agccagatccggcagatcccgccggaagatggttgagat 544
>gb|BT016390.1| Zea mays clone Contig223 mRNA sequence Length = 1104 Score = 270 bits (136), Expect = 5e-69 Identities = 421/516 (81%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaagaaaa 122 ||||||| ||||| ||||||||| | ||||| || || |||||| |||| || || | Sbjct: 72 ccatggctgtcggaaagaacaagaggatctccaagggaaagaagggtggcaagaaaaaga 131 Query: 123 cggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaaca 182 | ||||| || ||| | |||||||| ||||||||||| ||||| ||| || |||||| Sbjct: 132 ccgtcgaccctttctctaagaaggattggtatgacatcaaggcaccgtcggtgttcagtg 191 Query: 183 cccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagg 242 ||||||||||| ||||| ||||| |||||||||||||| |||| |||||| ||||||| Sbjct: 192 tgcgcaacatcgggaagactctcgtatccaggacacagggtaccaggattgcttctgagg 251 Query: 243 gtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggaccagg 302 |||| ||||||||||| |||||||||| | | || || || ||||| || ||||| || | Sbjct: 252 gtctgaagcacagagtctttgaggtttgcctagctgatcttcagggcgacgaggatcaag 311 Query: 303 ctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaact 362 ||| |||||| ||||| || ||||| || |||||||| || | |||||| |||||||||| Sbjct: 312 cttacaggaaaatcaggctccgtgctgaagatgtgcagggcaggaatgtgctcacaaact 371 Query: 363 tttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacac 422 ||||||||||| |||| ||||| || || || ||||| || || | ||||||||||||| Sbjct: 372 tttggggtatgaattttaccactgataaactgagatccctagtgaagaagtggcagacat 431 Query: 423 taattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgca 482 |||| || |||||||||||||| ||||| || ||||| |||||| | || ||||||||| Sbjct: 432 taatcgaagcccatgttgatgtcaagacaaccgacaactacatgttgcgtttgttctgca 491 Query: 483 ttggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagcc 542 | |||||||| ||||| || || |||||||| || | || |||||||||||||| || Sbjct: 492 tcggcttcaccaagaggcgcccaaaccaagtcaagagaacctgctatgctcaggcatccc 551 Query: 543 agatcagacagattcgccggaagatggttgagatta 578 ||||| | ||||| ||||| |||||||||||||||| Sbjct: 552 agatccgtcagatccgccgaaagatggttgagatta 587
>dbj|AK071037.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079A13, full insert sequence Length = 1118 Score = 262 bits (132), Expect = 1e-66 Identities = 420/516 (81%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaaga 119 |||||||||| ||||||||||||||||| |||||||| || ||||||| ||| |||| Sbjct: 99 cagccatggccgtcggcaagaacaagcggatctcgaaggggaagaagggatccaagaaga 158 Query: 120 aaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttca 179 | || |||||||| || | |||||||| |||||||| || ||||| ||| || |||||| Sbjct: 159 agaccgtcgatccttttgcgaagaaggattggtatgatatcaaggccccgtcggtgttca 218 Query: 180 acacccgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctg 239 || | ||| |||| ||||| ||||| |||||||||||||| || |||||||| || | Sbjct: 219 acgtgagaaacgtcgggaagacgctcgtgtccaggacacagggcacaaagattgcttcag 278 Query: 240 agggtcttaagcacagagtttttgaggtttccttggcagacctccagggtgatgaggacc 299 |||| || |||||| | || |||||||| |||||||| || || ||| |||||||| | Sbjct: 279 agggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcagaacgatgaggatc 338 Query: 300 aggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaa 359 |||| | | | ||||||||||| ||||| ||||||||||| || || |||||||| |||| Sbjct: 339 aggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaaatgttcttacaa 398 Query: 360 acttttggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcaga 419 |||| ||||| ||| |||||| ||||||||||| |||||| | || | ||| ||||||| Sbjct: 399 acttctggggcatgagtttcacgaccgacaagctcagatcattggtcaagaaatggcaga 458 Query: 420 cactaattgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttct 479 | ||||| ||||| ||||| ||||| |||||||||| || |||||||| || || |||| Sbjct: 459 cgctaatagaggctcatgtggatgtagagaccactgataactacatgctgcgtctcttct 518 Query: 480 gcattggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcga 539 || |||||||||| ||||| | || || ||||| |||||||| ||||||||||| || | Sbjct: 519 gcgttggcttcaccaagaggaggccaaatcaagtcaaacggacatgctatgctcaagcaa 578 Query: 540 gccagatcagacagattcgccggaagatggttgaga 575 ||||||| ||||||| || || |||||||| |||| Sbjct: 579 gccagattcgacagatccgtcgcaagatggtggaga 614
>gb|DQ445133.1| Striga asiatica isolate St513 S phase protein mRNA, partial cds Length = 571 Score = 184 bits (93), Expect = 2e-43 Identities = 198/233 (84%) Strand = Plus / Plus Query: 227 aagattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccag 286 |||||||| ||||| ||||| |||||| | || |||||||| |||||||| ||||| || Sbjct: 4 aagattgcttctgaaggtctcaagcaccgtgtgtttgaggtgtccttggctgaccttcaa 63 Query: 287 ggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaag 346 |||||||||||||| | |||||||||||| | | | || || ||||| || |||||| Sbjct: 64 ggtgatgaggaccactccttcaggaagatccgtttgagagctgaagatgttcagggaaag 123 Query: 347 aatgttctcacaaacttttggggtatggatttcaccaccgacaagcttagatcacttgta 406 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||| || || Sbjct: 124 aatgttctcacaaacttctggggcatggatttcaccaccgacaagctgagatctctcgtg 183 Query: 407 aggaagtggcagacactaattgaggcccatgttgatgttaagaccactgacaa 459 ||||| |||||| ||||||||||||| ||||||||||| ||||| || ||||| Sbjct: 184 aggaaatggcagtcactaattgaggctcatgttgatgtcaagactaccgacaa 236
>gb|AY109383.1| Zea mays CL7224_1 mRNA sequence Length = 1236 Score = 159 bits (80), Expect = 1e-35 Identities = 212/256 (82%) Strand = Plus / Minus Query: 323 cgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggtatggatttcacc 382 ||||| || ||||||||||| | |||||| ||||||||||||||||||||| |||| ||| Sbjct: 863 cgtgctgaagatgtgcaaggcaggaatgtgctcacaaacttttggggtatgaattttacc 804 Query: 383 accgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcccatgttgat 442 || || || || ||||| || || | ||||||||||||| |||| || |||||||||||| Sbjct: 803 actgataaactgagatccctagtgaagaagtggcagacattaatcgaagcccatgttgat 744 Query: 443 gttaagaccactgacaattacatgctccggctgttctgcattggcttcactaagagacgt 502 || ||||| || ||||| |||||| | || |||||||||| |||||||| ||||| || Sbjct: 743 gtcaagacaaccgacaactacatgttgcgtttgttctgcatcggcttcaccaagaggcgc 684 Query: 503 cccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacagattcgccgg 562 || ||||| || || | || |||||||||||||| ||||||| | ||||| ||||| Sbjct: 683 ccaaaccaggtcaagagaacctgctatgctcaggcatcccagatccgtcagatccgccgt 624 Query: 563 aagatggttgagatta 578 |||||||||||||||| Sbjct: 623 aagatggttgagatta 608 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 140 aagaaggactggtatgacataaaggcgccgacgttgttcaacacccgcaacatcggcaag 199 |||||||| ||||||||||| ||||| ||| || |||||| ||||||||||| ||| Sbjct: 1046 aagaaggattggtatgacatcaaggcaccgtcggtgttcagtgtgcgcaacatcgggaag 987 Query: 200 accctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtt 259 || ||||| |||||||||||||| |||| |||||| ||||||||||| ||||||||||| Sbjct: 986 actctcgtatccaggacacagggtaccaggattgcttctgagggtctgaagcacagagtc 927 Query: 260 tttga 264 ||||| Sbjct: 926 tttga 922
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 383 accgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcccatgttgat 442 ||||| ||||| ||||||||||| | ||||||||||||||| |||||||| ||||| ||| Sbjct: 5244594 accgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggat 5244653 Query: 443 gttaagaccactgacaattacatgctccggctgttctgcattggcttcactaagagacgt 502 || || ||||| ||| |||||||| || |||||||| || |||||||| ||| | || Sbjct: 5244654 gtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcgg 5244713 Query: 503 cccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacag 553 || ||||| ||||| |||||||||||||||| ||||| |||||||||||| Sbjct: 5244714 cctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacag 5244764 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| |||||||| || ||||| ||||| |||||||| ||||| || || |||||| Sbjct: 5244369 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5244428 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 5244429 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5244488 Query: 348 atgttctcacaaacttttggg 368 | || ||||| |||||||||| Sbjct: 5244489 acgtgctcaccaacttttggg 5244509 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| | ||||||||||||||||| || ||||| ||| || ||||||| Sbjct: 5243459 gtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtg 5243518 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggg 222 || |||||||||||||||||||| |||||||||||||| Sbjct: 5243519 cggaacatcggcaagaccctcgtgtccaggacacaggg 5243556 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctc 93 |||||||||| || || ||||||||||||||||| Sbjct: 5243276 cagccatggccgtaggtaagaacaagcgcatctc 5243309
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 383 accgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcccatgttgat 442 ||||| ||||| ||||||||||| | ||||||||||||||| |||||||| ||||| ||| Sbjct: 67996 accgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggat 68055 Query: 443 gttaagaccactgacaattacatgctccggctgttctgcattggcttcactaagagacgt 502 || || ||||| ||| |||||||| || |||||||| || |||||||| ||| | || Sbjct: 68056 gtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcgg 68115 Query: 503 cccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacag 553 || ||||| ||||| |||||||||||||||| ||||| |||||||||||| Sbjct: 68116 cctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacag 68166 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| |||||||| || ||||| ||||| |||||||| ||||| || || |||||| Sbjct: 67771 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 67830 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 67831 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 67890 Query: 348 atgttctcacaaacttttggg 368 | || ||||| |||||||||| Sbjct: 67891 acgtgctcaccaacttttggg 67911 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| | ||||||||||||||||| || ||||| ||| || ||||||| Sbjct: 66861 gtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtg 66920 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggg 222 || |||||||||||||||||||| |||||||||||||| Sbjct: 66921 cggaacatcggcaagaccctcgtgtccaggacacaggg 66958 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctc 93 |||||||||| || || ||||||||||||||||| Sbjct: 66678 cagccatggccgtaggtaagaacaagcgcatctc 66711
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 383 accgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcccatgttgat 442 ||||| ||||| ||||||||||| | ||||||||||||||| |||||||| ||||| ||| Sbjct: 11924 accgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggat 11865 Query: 443 gttaagaccactgacaattacatgctccggctgttctgcattggcttcactaagagacgt 502 || || ||||| ||| |||||||| || |||||||| || |||||||| ||| | || Sbjct: 11864 gtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcgg 11805 Query: 503 cccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacag 553 || ||||| ||||| |||||||||||||||| ||||| |||||||||||| Sbjct: 11804 cctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacag 11754 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| |||||||| || ||||| ||||| |||||||| ||||| || || |||||| Sbjct: 12149 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 12090 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 12089 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 12030 Query: 348 atgttctcacaaacttttggg 368 | || ||||| |||||||||| Sbjct: 12029 acgtgctcaccaacttttggg 12009 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Minus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| | ||||||||||||||||| || ||||| ||| || ||||||| Sbjct: 13059 gtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtg 13000 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggg 222 || |||||||||||||||||||| |||||||||||||| Sbjct: 12999 cggaacatcggcaagaccctcgtgtccaggacacaggg 12962 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Minus Query: 60 cagccatggcggtcggcaagaacaagcgcatctc 93 |||||||||| || || ||||||||||||||||| Sbjct: 13242 cagccatggccgtaggtaagaacaagcgcatctc 13209
>gb|DQ164221.1| Nicotiana tabacum cyc07 mRNA, complete cds Length = 786 Score = 125 bits (63), Expect = 2e-25 Identities = 303/383 (79%) Strand = Plus / Plus Query: 194 ggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagcac 253 ||||||||||| ||| | ||||| ||||| || |||||||| || || || || |||||| Sbjct: 130 ggcaagaccctggtcactaggactcagggtactaagattgcttcggaaggactaaagcac 189 Query: 254 agagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcaggaag 313 ||||| ||||| || ||||| || || ||| |||||||| || ||||||||||| Sbjct: 190 agagtatttgaagtcagtttggctgatcttcagaaggatgaggatcaatctttcaggaag 249 Query: 314 atcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggtatg 373 ||| | | | ||||| ||||||||||| |||||||| ||||||||||| ||||| ||| Sbjct: 250 atccgcttgagggcagaagatgtgcaagggaagaatgtcctcacaaacttctggggaatg 309 Query: 374 gatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcc 433 |||||||| || |||||| | || || || |||| ||||||||||||| | |||||||| Sbjct: 310 gatttcacaacagacaagttgaggtctctggtaaagaagtggcagacattgattgaggct 369 Query: 434 catgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttcact 493 ||||| ||||| || || || || | |||| ||| || |||||||||||| || || Sbjct: 370 catgtggatgtcaaaactacagatagctacactctcaggatgttctgcattgcttttaca 429 Query: 494 aagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacag 553 |||| |||||| ||||| ||| ||||| || ||||||||| ||||||||| | ||| Sbjct: 430 aagaaacgtccaaaccagcagaagcggacatgttatgctcagagcagccagatccgtcag 489 Query: 554 attcgccggaagatggttgagat 576 || || ||||| ||||||||||| Sbjct: 490 atccgtcggaaaatggttgagat 512 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 140 aagaaggactggtatgacataaaggc 165 |||||||||||||||||||||||||| Sbjct: 76 aagaaggactggtatgacataaaggc 101
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 376 tttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgaggccca 435 |||||| ||||||||||| |||||| | || | ||| |||||||| ||||| ||||| || Sbjct: 12315789 tttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaatagaggctca 12315730 Query: 436 tgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttcactaa 495 ||| ||||| ||||||||||| || |||||||| || || ||||||||||||||||| || Sbjct: 12315729 tgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattggcttcaccaa 12315670 Query: 496 gagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccagat 546 ||| | || || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 12315669 gaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 12315619 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| || ||||| || |||||| | || |||||||| |||||||| || || ||| Sbjct: 12316009 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12315950 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | | | ||||||||||| ||||| ||||||||||| || || | Sbjct: 12315949 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12315890 Query: 348 atgttctcacaaacttttggg 368 ||||||| |||||||| |||| Sbjct: 12315889 atgttcttacaaacttctggg 12315869 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaa 96 |||||||||| ||||||||||||||||| |||||||| Sbjct: 12318592 cagccatggccgtcggcaagaacaagcggatctcgaa 12318556 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 140 aagaaggactggtatgacataaaggcgccgacgttgttcaacacccgcaacatcggcaag 199 |||||||| |||||||| || ||||| ||| || |||||||| | ||| |||| ||| Sbjct: 12318400 aagaaggattggtatgatatcaaggccccgtcggtgttcaacgtgagaaacgtcgggaag 12318341 Query: 200 accctcgtctccaggacacaggg 222 || ||||| |||||||||||||| Sbjct: 12318340 acgctcgtgtccaggacacaggg 12318318
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Plus Query: 383 accgacaagcttagatcacttgtaaggaagtggcagacactaattgaggcccatgttgat 442 ||||| ||||| ||||||||||| | ||||||||||||||| |||||||| ||||| ||| Sbjct: 5243809 accgataagctcagatcacttgttaagaagtggcagacactgattgaggctcatgtggat 5243868 Query: 443 gttaagaccactgacaattacatgctccggctgttctgcattggcttcactaagagacgt 502 || || ||||| ||| |||||||| || |||||||| || |||||||| ||| | || Sbjct: 5243869 gtcaaaaccacagacggctacatgctgcgtctgttctgtatcggcttcaccaagcggcgg 5243928 Query: 503 cccaaccaagtgaaacggacttgctatgctcaggcgagccagatcagacag 553 || ||||| ||||| |||||||||||||||| ||||| |||||||||||| Sbjct: 5243929 cctaaccaggtgaagaggacttgctatgctcaagcgagtcagatcagacag 5243979 Score = 121 bits (61), Expect = 3e-24 Identities = 121/141 (85%) Strand = Plus / Plus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| |||||||| || ||||| ||||| |||||||| ||||| || || |||||| Sbjct: 5243584 agattgcttctgagggcctaaagcatagagtgtttgaggtctccttagctgatctccaga 5243643 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | ||||||||||||||||||||| |||||||||||||| |||| Sbjct: 5243644 acgatgaggatcaggcgtacaggaagatcagacttcgtgctgaggatgtgcaagggaaga 5243703 Query: 348 atgttctcacaaacttttggg 368 | || ||||| |||||||||| Sbjct: 5243704 acgtgctcaccaacttttggg 5243724 Score = 83.8 bits (42), Expect = 6e-13 Identities = 84/98 (85%) Strand = Plus / Plus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| | ||||||||||||||||| || ||||| ||| || ||||||| Sbjct: 5242674 gtcgatccctttgctaagaaggactggtatgatatcaaggccccgtcggtgttcaatgtg 5242733 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggg 222 || |||||||||||||||||||| |||||||||||||| Sbjct: 5242734 cggaacatcggcaagaccctcgtgtccaggacacaggg 5242771 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 60 cagccatggcggtcggcaagaacaagcgcatctc 93 |||||||||| || || ||||||||||||||||| Sbjct: 5242491 cagccatggccgtaggtaagaacaagcgcatctc 5242524
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 376 tttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgaggccca 435 |||||| ||||||||||| |||||| | || | ||| |||||||| ||||| ||||| || Sbjct: 12270159 tttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaatagaggctca 12270100 Query: 436 tgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttcactaa 495 ||| ||||| ||||||||||| || |||||||| || || ||||||||||||||||| || Sbjct: 12270099 tgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattggcttcaccaa 12270040 Query: 496 gagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccagat 546 ||| | || || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 12270039 gaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 12269989 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| || ||||| || |||||| | || |||||||| |||||||| || || ||| Sbjct: 12270379 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 12270320 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | | | ||||||||||| ||||| ||||||||||| || || | Sbjct: 12270319 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 12270260 Query: 348 atgttctcacaaacttttggg 368 ||||||| |||||||| |||| Sbjct: 12270259 atgttcttacaaacttctggg 12270239 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaa 96 |||||||||| ||||||||||||||||| |||||||| Sbjct: 12272962 cagccatggccgtcggcaagaacaagcggatctcgaa 12272926 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 140 aagaaggactggtatgacataaaggcgccgacgttgttcaacacccgcaacatcggcaag 199 |||||||| |||||||| || ||||| ||| || |||||||| | ||| |||| ||| Sbjct: 12272770 aagaaggattggtatgatatcaaggccccgtcggtgttcaacgtgagaaacgtcgggaag 12272711 Query: 200 accctcgtctccaggacacaggg 222 || ||||| |||||||||||||| Sbjct: 12272710 acgctcgtgtccaggacacaggg 12272688
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 125 bits (63), Expect = 2e-25 Identities = 144/171 (84%) Strand = Plus / Minus Query: 376 tttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgaggccca 435 |||||| ||||||||||| |||||| | || | ||| |||||||| ||||| ||||| || Sbjct: 30154 tttcacgaccgacaagctcagatcattggtcaagaaatggcagacgctaatagaggctca 30095 Query: 436 tgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttcactaa 495 ||| ||||| ||||||||||| || |||||||| || || ||||||||||||||||| || Sbjct: 30094 tgtggatgtaaagaccactgataactacatgctgcgtctcttctgcattggcttcaccaa 30035 Query: 496 gagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccagat 546 ||| | || || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 30034 gaggaggccaaatcaagtcaaacggacatgctatgctcaagcaagccagat 29984 Score = 73.8 bits (37), Expect = 6e-10 Identities = 115/141 (81%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| || ||||| || |||||| | || |||||||| |||||||| || || ||| Sbjct: 30374 agattgcttcagagggcctcaagcaccgtgtgtttgaggtctccttggctgatcttcaga 30315 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 |||||||| ||||| | | | ||||||||||| ||||| ||||||||||| || || | Sbjct: 30314 acgatgaggatcaggcgtaccgtaagatcagactacgtgccgaggatgtgcaggggaaaa 30255 Query: 348 atgttctcacaaacttttggg 368 ||||||| |||||||| |||| Sbjct: 30254 atgttcttacaaacttctggg 30234 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 60 cagccatggcggtcggcaagaacaagcgcatctcgaa 96 |||||||||| ||||||||||||||||| |||||||| Sbjct: 32957 cagccatggccgtcggcaagaacaagcggatctcgaa 32921 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 140 aagaaggactggtatgacataaaggcgccgacgttgttcaacacccgcaacatcggcaag 199 |||||||| |||||||| || ||||| ||| || |||||||| | ||| |||| ||| Sbjct: 32765 aagaaggattggtatgatatcaaggccccgtcggtgttcaacgtgagaaacgtcgggaag 32706 Query: 200 accctcgtctccaggacacaggg 222 || ||||| |||||||||||||| Sbjct: 32705 acgctcgtgtccaggacacaggg 32683
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| | | Sbjct: 10824500 gtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtc 10824441 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggggaccaag 229 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10824440 cgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 10824396 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 10823493 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 10823434 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 || ||||| ||| | || || || || ||||| || || || || |||||||| |||||| Sbjct: 10823433 ggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagccag 10823374 Query: 545 atc 547 ||| Sbjct: 10823373 atc 10823371 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||||||||||||||| ||||| | || ||||| || |||||||| || || ||| Sbjct: 10823785 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 10823726 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 ||| ||||| ||||||| ||||||| | ||||||||||| |||||||| || || | || Sbjct: 10823725 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 10823666 Query: 348 atgttctcac 357 |||| ||||| Sbjct: 10823665 atgtcctcac 10823656 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Minus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 10824698 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 10824639 Query: 119 aa 120 || Sbjct: 10824638 aa 10824637 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 552 agattcgccggaagatggttgagat 576 |||| |||||||||||||||||||| Sbjct: 10823258 agatccgccggaagatggttgagat 10823234
>gb|AY849388.1| Vitis vinifera cultivar Riesling cyc07 mRNA, partial cds Length = 879 Score = 113 bits (57), Expect = 7e-22 Identities = 189/233 (81%) Strand = Plus / Plus Query: 218 caggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtttccttggca 277 ||||| ||||||||||| ||||| || || ||||||||||| | || | |||||||||| Sbjct: 88 cagggaaccaagattgcctctgaagggctcaagcacagagtgtctgggatttccttggct 147 Query: 278 gacctccagggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtg 337 || || ||| |||||||| | || | |||||||||| |||| | || ||||||||| Sbjct: 148 gatcttcagaacgatgaggatcgtgcctacaggaagatccgactgagagctgaggatgtg 207 Query: 338 caaggaaagaatgttctcacaaacttttggggtatggatttcaccaccgacaagcttaga 397 |||||||||||||| ||||||||||| ||||| ||||| || || || |||||||| || Sbjct: 208 caaggaaagaatgtcctcacaaacttctggggaatggactttacaacagacaagctgagg 267 Query: 398 tcacttgtaaggaagtggcagacactaattgaggcccatgttgatgttaagac 450 || | || | |||||||||||| | |||||||| ||||| ||||||||||| Sbjct: 268 tctttggtgcgcaagtggcagacattgattgaggctcatgtggatgttaagac 320 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 140 aagaaggactggtatgacataaaggcgcc 168 |||||||||||||||||||| |||||||| Sbjct: 10 aagaaggactggtatgacattaaggcgcc 38
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| | | Sbjct: 30699 gtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtc 30640 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggggaccaag 229 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 30639 cgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 30595 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 29692 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 29633 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 || ||||| ||| | || || || || ||||| || || || || |||||||| |||||| Sbjct: 29632 ggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagccag 29573 Query: 545 atc 547 ||| Sbjct: 29572 atc 29570 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||||||||||||||| ||||| | || ||||| || |||||||| || || ||| Sbjct: 29984 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 29925 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 ||| ||||| ||||||| ||||||| | ||||||||||| |||||||| || || | || Sbjct: 29924 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 29865 Query: 348 atgttctcac 357 |||| ||||| Sbjct: 29864 atgtcctcac 29855 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Minus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 30897 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 30838 Query: 119 aa 120 || Sbjct: 30837 aa 30836 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 552 agattcgccggaagatggttgagat 576 |||| |||||||||||||||||||| Sbjct: 29457 agatccgccggaagatggttgagat 29433
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 113 bits (57), Expect = 7e-22 Identities = 93/105 (88%) Strand = Plus / Minus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 ||||||||||| |||||||||| ||||| ||||| ||||||||||| ||||| | | Sbjct: 163981 gtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtc 163922 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggggaccaag 229 |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 163921 cgcaacatcggcaagaccctcgtctccaggacccaggggaccaag 163877 Score = 77.8 bits (39), Expect = 4e-11 Identities = 102/123 (82%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| |||||||||||||| || || ||||||||||| ||||| |||||| Sbjct: 162974 attgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcatt 162915 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 || ||||| ||| | || || || || ||||| || || || || |||||||| |||||| Sbjct: 162914 ggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagccag 162855 Query: 545 atc 547 ||| Sbjct: 162854 atc 162852 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Minus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||||||||||||||| ||||| | || ||||| || |||||||| || || ||| Sbjct: 163266 agattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcaga 163207 Query: 288 gtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaaga 347 ||| ||||| ||||||| ||||||| | ||||||||||| |||||||| || || | || Sbjct: 163206 atgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggagga 163147 Query: 348 atgttctcac 357 |||| ||||| Sbjct: 163146 atgtcctcac 163137 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Minus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| || |||||||||||| | ||||| || || ||||||| ||||| ||| Sbjct: 164179 gcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaag 164120 Query: 119 aa 120 || Sbjct: 164119 aa 164118 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 552 agattcgccggaagatggttgagat 576 |||| |||||||||||||||||||| Sbjct: 162739 agatccgccggaagatggttgagat 162715
>dbj|AB029635.1| Daucus carota mRNA for cyc07, complete cds Length = 1050 Score = 109 bits (55), Expect = 1e-20 Identities = 193/239 (80%) Strand = Plus / Plus Query: 218 caggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtttccttggca 277 ||||| ||||||||||| ||||| || || || ||| |||| || ||||||| | | || Sbjct: 175 cagggtaccaagattgcttctgaaggactcaaacaccgagtgttcgaggtttgccttgct 234 Query: 278 gacctccagggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtg 337 ||||| ||||| |||||||||||||||| |||||||| | || | |||||||||||| Sbjct: 235 gaccttcagggagatgaggaccaggcttataggaagattcgcctgagagcagaggatgtg 294 Query: 338 caaggaaagaatgttctcacaaacttttggggtatggatttcaccaccgacaagcttaga 397 ||||| |||||||| || |||||||| | || ||||| ||||| || |||||| | || Sbjct: 295 caagggaagaatgtgcttacaaacttctatggaatggacttcacaactgacaagttgagg 354 Query: 398 tcacttgtaaggaagtggcagacactaattgaggcccatgttgatgttaagaccactga 456 || || ||| | |||||||||||||| ||||| || ||||| ||||| ||||| ||||| Sbjct: 355 tctctggtacgcaagtggcagacactgattgaagctcatgtagatgtgaagacaactga 413 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Plus Query: 539 agccagatcagacagattcgccggaagatggttgagatta 578 ||||||||| | ||||||||||| ||||||||||| |||| Sbjct: 496 agccagatccggcagattcgccgtaagatggttgaaatta 535 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 58 tgcagccatggcggtcggcaagaacaagcgcatctcgaa 96 |||| ||||||| ||||||||||||||| | |||||||| Sbjct: 15 tgcaaccatggctgtcggcaagaacaagaggatctcgaa 53
>emb|Z25769.1|BRSPSG B.rapa mRNA for S phase specific gene Length = 1050 Score = 107 bits (54), Expect = 4e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||| ||||| |||||||| || || || | || | |||||||||||| | Sbjct: 406 tggggtatggacttcacaaccgacaaactcaggtccttggttaagaagtggcagactttg 465 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 || ||| | |||||||||||||||||||||||||| |||| || |||| |||||||| Sbjct: 466 atcgagtctcatgttgatgttaagaccactgacaactacacactgaggcttttctgcatc 525 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | |||||||| || | ||||||||||||||| | |||||| Sbjct: 526 gccttcaccaagagacgtgctaaccaagttaagagaacttgctatgctcagtctagccag 585 Query: 545 atcagacagattcg 558 ||| | |||||||| Sbjct: 586 atccgtcagattcg 599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 |||| ||||| || || ||||| || ||||| |||||||||||||| |||||| | || | Sbjct: 233 tcggaaagacacttgtttccagaactcagggtaccaagattgcatcagagggtttgaaac 292 Query: 252 acagagtttttgaggt 267 ||||||| |||||||| Sbjct: 293 acagagtctttgaggt 308
>gb|L23553.1|BRRSPSK Brassica rapa S-phase-specific (BIS289) mRNA, complete cds Length = 1050 Score = 107 bits (54), Expect = 4e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||| ||||| |||||||| || || || | || | |||||||||||| | Sbjct: 406 tggggtatggacttcacaaccgacaaactcaggtccttggttaagaagtggcagactttg 465 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 || ||| | |||||||||||||||||||||||||| |||| || |||| |||||||| Sbjct: 466 atcgagtctcatgttgatgttaagaccactgacaactacacactgaggcttttctgcatc 525 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | |||||||| || | ||||||||||||||| | |||||| Sbjct: 526 gccttcaccaagagacgtgctaaccaagttaagagaacttgctatgctcagtctagccag 585 Query: 545 atcagacagattcg 558 ||| | |||||||| Sbjct: 586 atccgtcagattcg 599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 |||| ||||| || || ||||| || ||||| |||||||||||||| |||||| | || | Sbjct: 233 tcggaaagacacttgtttccagaactcagggtaccaagattgcatcagagggtttgaaac 292 Query: 252 acagagtttttgaggt 267 ||||||| |||||||| Sbjct: 293 acagagtctttgaggt 308
>ref|NM_111356.3| Arabidopsis thaliana structural constituent of ribosome AT3G04840 mRNA, complete cds Length = 1004 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 359 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 418 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 419 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 478 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 479 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 538 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 539 atccgtcagatccgcaggaagatg 562 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 245 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 304 Query: 311 aagatc 316 |||||| Sbjct: 305 aagatc 310
>gb|AY081585.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase specific) (At3g04840) mRNA, complete cds Length = 870 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 301 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 360 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 361 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 420 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 421 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 480 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 481 atccgtcagatccgcaggaagatg 504 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 187 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 246 Query: 311 aagatc 316 |||||| Sbjct: 247 aagatc 252
>gb|AY062796.1| Arabidopsis thaliana putative 40S ribosomal protein S3A (S phase specific) (At3g04840; T9J14.21) mRNA, complete cds Length = 1000 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 358 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 417 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 418 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 477 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 478 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 537 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 538 atccgtcagatccgcaggaagatg 561 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 244 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 303 Query: 311 aagatc 316 |||||| Sbjct: 304 aagatc 309
>emb|BX822077.1|CNS0A7LX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 71 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 130 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 131 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 190 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 191 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 250 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 251 atccgtcagatccgcaggaagatg 274
>emb|BX824488.1|CNS0A5KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 291 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 350 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 351 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 410 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 411 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 470 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 471 atccgtcagatccgcaggaagatg 494 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 177 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 236 Query: 311 aagatc 316 |||||| Sbjct: 237 aagatc 242
>gb|AY085787.1| Arabidopsis thaliana clone 18185 mRNA, complete sequence Length = 1001 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||| ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | Sbjct: 359 tggggcatggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttg 418 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || Sbjct: 419 attgaggctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatc 478 Query: 485 ggcttcactaagagacgtcccaaccaagtgaaacggacttgctatgctcaggcgagccag 544 | |||||| ||||||||| | ||||| || || |||||||||| ||||| | ||||| Sbjct: 479 gccttcaccaagagacgtgctaaccaggtcaagaggacttgctacgctcaatccagccaa 538 Query: 545 atcagacagattcgccggaagatg 568 ||| | ||||| ||| |||||||| Sbjct: 539 atccgtcagatccgcaggaagatg 562 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Plus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 245 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 304 Query: 311 aagatc 316 |||||| Sbjct: 305 aagatc 310
>emb|AJ515028.1|CAR515028 Cicer arietinum mRNA for ribosomal protein S3a (rs3a gene) Length = 1026 Score = 93.7 bits (47), Expect = 6e-16 Identities = 275/351 (78%) Strand = Plus / Plus Query: 218 caggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtttccttggca 277 ||||| ||||||||||| ||||| || || || || | || |||||| | || ||||| Sbjct: 204 cagggtaccaagattgcttctgaaggactcaaacatcgtgtgtttgagatctcattggct 263 Query: 278 gacctccagggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtg 337 || || || ||||||||||| | |||||||||||||| || | | || || ||||| Sbjct: 264 gatcttcaaggtgatgaggataatgctttcaggaagattaggttgagggctgaagatgtt 323 Query: 338 caaggaaagaatgttctcacaaacttttggggtatggatttcaccaccgacaagcttaga 397 || || |||||||| ||||| ||||||| ||||||||||||||||| |||||||| || Sbjct: 324 cagggcaagaatgtcctcaccaacttttatggtatggatttcaccactgacaagctcagg 383 Query: 398 tcacttgtaaggaagtggcagacactaattgaggcccatgttgatgttaagaccactgac 457 || | || | || ||||| || || ||||| || ||||| ||||||||||||||||| Sbjct: 384 tctttggtccgtaaatggcaaactctcattgaagctcatgtggatgttaagaccactgat 443 Query: 458 aattacatgctccggctgttctgcattggcttcactaagagacgtcccaaccaagtgaaa 517 ||||| | | | |||||||||||||||| || |||||||| ||||||||||| Sbjct: 444 aattataccttgagaatgttctgcattggctttaccaagagacgcagtaaccaagtgaag 503 Query: 518 cggacttgctatgctcaggcgagccagatcagacagattcgccggaagatg 568 | || || |||||||| | ||||||||||||||||| ||| |||||||| Sbjct: 504 agaacctgttatgctcaatccagccagatcagacagatccgcaggaagatg 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaagaaaa 122 ||||||||||||||||||||||| | || || || || ||||||| |||| |||||| Sbjct: 49 ccatggcggtcggcaagaacaagagaatttccaagggaaagaagggaggcaagaagaaag 108 Query: 123 cggtcgatcccttcaccaagaaggactggtatgacataaaggc 165 | | ||||||||| |||||||||| |||||||| || ||||| Sbjct: 109 ccgccgatcccttttccaagaaggattggtatgatatcaaggc 151
>dbj|D01058.1|CTRCYC07 Catharanthus roseus cyc07 mRNA, complete cds Length = 1100 Score = 93.7 bits (47), Expect = 6e-16 Identities = 218/275 (79%) Strand = Plus / Plus Query: 218 caggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtttccttggca 277 ||||| ||||||||||| || |||||||| |||| |||||||| ||| |||| | || Sbjct: 225 cagggtaccaagattgcttccgagggtctcgagcatagagttttcgagatttctcttgct 284 Query: 278 gacctccagggtgatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtg 337 || || ||||||||||||||||| | |||||||||||| || | | || || ||| | Sbjct: 285 gatcttcagggtgatgaggaccactcattcaggaagatccgattgagagccgaagatatt 344 Query: 338 caaggaaagaatgttctcacaaacttttggggtatggatttcaccaccgacaagcttaga 397 || ||||| |||||||| || ||||| ||||||||||| ||||| || || ||| | || Sbjct: 345 cagggaaaaaatgttctgactaacttctggggtatggacttcactacagataagttgagg 404 Query: 398 tcacttgtaaggaagtggcagacactaattgaggcccatgttgatgttaagaccactgac 457 || ||||| ||||||||||| | | || || || ||||||||||||||||| |||||| Sbjct: 405 tctcttgtgaggaagtggcaatccttgatagaagctcatgttgatgttaagacaactgac 464 Query: 458 aattacatgctccggctgttctgcattggcttcac 492 | |||| | || ||||||||||||||||||| Sbjct: 465 agctacacattgaggatgttctgcattggcttcac 499
>gb|AC009465.7|AC009465 Arabidopsis thaliana chromosome 3 BAC T9J14 genomic sequence, complete sequence Length = 93234 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Minus Query: 371 atggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgag 430 ||||| ||||||||||| || ||||| ||| | || | |||||||||||| | |||||| Sbjct: 74311 atggacttcaccaccgataaacttaggtcattggttaagaagtggcagactttgattgag 74252 Query: 431 gcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttc 490 || |||||||||||||| ||||| |||| ||||| ||| |||| ||||| || | |||| Sbjct: 74251 gctcatgttgatgttaaaaccaccgacagttacactctcaggctattctgtatcgccttc 74192 Query: 491 actaagagacgtcccaaccaagtgaaacggacttgctatgctca 534 || ||||||||| | ||||| || || |||||||||| ||||| Sbjct: 74191 accaagagacgtgctaaccaggtcaagaggacttgctacgctca 74148 Score = 44.1 bits (22), Expect = 0.50 Identities = 55/66 (83%) Strand = Plus / Minus Query: 251 cacagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagg 310 |||||||||||||||||||| | || || || || ||||||||||| | |||| |||| Sbjct: 74540 cacagagtttttgaggtttctcttgctgatcttcaaggtgatgaggataacgcttacagg 74481 Query: 311 aagatc 316 |||||| Sbjct: 74480 aagatc 74475
>gb|DQ241862.1| Solanum tuberosum clone 027B03 40S ribosomal protein S3a-like mRNA, complete cds Length = 1118 Score = 85.7 bits (43), Expect = 1e-13 Identities = 205/259 (79%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 ||||||| ||||| || ||||||| ||||| ||||||||||| || ||||| || || | Sbjct: 214 tcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagagggcctaaaac 273 Query: 252 acagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagga 311 ||||||| ||||| ||| | |||| || || ||| |||||||| ||||||||||||| Sbjct: 274 acagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttcagga 333 Query: 312 agatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggta 371 | ||| | | | ||||| ||||||||||| | |||||||||||||||||| || | Sbjct: 334 aaatccgtttgagagcagaagatgtgcaagggaggaatgttctcacaaacttccatggaa 393 Query: 372 tggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgagg 431 |||||||||| || || ||| | || || || || | || |||||||| | ||||||| Sbjct: 394 tggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgattgagg 453 Query: 432 cccatgttgatgttaagac 450 ||||||||||||| ||||| Sbjct: 454 cccatgttgatgtcaagac 472 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 551 cagattcgccggaagatggttgagatta 578 ||||| ||| |||||||||||||||||| Sbjct: 573 cagatccgcaggaagatggttgagatta 600
>gb|AC146852.15| Medicago truncatula clone mth2-58k21, complete sequence Length = 145314 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Plus Query: 367 gggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaat 426 |||||||||||| ||||||||||||||||| ||| | || | ||||||||||| || || Sbjct: 48499 gggtatggattttaccaccgacaagcttaggtcattggtgcgtaagtggcagactctcat 48558 Query: 427 tgaggcccatgttgatgttaagaccactga 456 ||| || ||||| ||||||||||||||||| Sbjct: 48559 tgaagctcatgtggatgttaagaccactga 48588 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 260 tttgaggtttccttggcagacctccagggtgatgaggaccaggctttcaggaagat 315 ||||||||||| ||||| || || || || ||||||||| | || ||||||||||| Sbjct: 48308 tttgaggtttcattggctgatcttcaaggagatgaggacaatgcattcaggaagat 48363
>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence Length = 108644 Score = 83.8 bits (42), Expect = 6e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 367 gggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaat 426 |||||||||||| ||||||||||||||||| ||| | || | ||||||||||| || || Sbjct: 42412 gggtatggattttaccaccgacaagcttaggtcattggtgcgtaagtggcagactctcat 42353 Query: 427 tgaggcccatgttgatgttaagaccactga 456 ||| || ||||| ||||||||||||||||| Sbjct: 42352 tgaagctcatgtggatgttaagaccactga 42323 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Minus Query: 260 tttgaggtttccttggcagacctccagggtgatgaggaccaggctttcaggaagat 315 ||||||||||| ||||| || || || || ||||||||| | || ||||||||||| Sbjct: 42603 tttgaggtttcattggctgatcttcaaggagatgaggacaatgcattcaggaagat 42548
>dbj|AB116637.1| Lentinula edodes Le. cyc07 mRNA for putative S-phase specific ribosomal protein cyc07, complete cds Length = 980 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 371 atggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgag 430 |||||||||||| |||||||||| |||| || ||| |||| |||||||| || ||||| Sbjct: 367 atggatttcacctccgacaagctgcgatctctcgtacggaaatggcagactctcattgaa 426 Query: 431 gcccatgttgatgttaagaccactgac 457 |||||||| ||||| |||||||||||| Sbjct: 427 gcccatgtcgatgtgaagaccactgac 453
>gb|AF093109.1| Tortula ruralis ribosomal protein S3 (rps3) mRNA, complete cds Length = 899 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 59 gcagccatggcggtcggcaagaacaagcgcatctcgaaaggtcggaagggaagcaaaaag 118 ||||||||||| ||||| ||| | |||||||| || || || |||||| |||| ||| Sbjct: 16 gcagccatggccgtcggaaaggataagcgcatttccaagggcaagaagggcggcaagaag 75 Query: 119 aaaacggtcgatcccttcaccaagaaggactggtatgacataaaggcgcc 168 |||| |||||||| ||| |||||||||||||||||||||| |||||||| Sbjct: 76 aaaattgtcgatccgttctccaagaaggactggtatgacatcaaggcgcc 125 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 290 gatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaat 349 |||||||||||||||||| | ||||||| || | || ||||||||||| || ||||| Sbjct: 244 gatgaggaccaggctttccgcaagatcaagctgagggcggaggatgtgcagggcaagaac 303 Query: 350 gttctcacaaacttttggggtatggatttcaccaccgacaagct 393 || ||||| ||||| ||||| ||||| |||||||| |||||||| Sbjct: 304 gtgctcaccaacttctggggcatggacttcaccacggacaagct 347
>ref|NM_119633.2| Arabidopsis thaliana structural constituent of ribosome AT4G34670 mRNA, complete cds Length = 1093 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 379 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 438 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 439 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 498 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 499 gccttcacaaagagacgtgctaaccaagtgaa 530 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 223 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 282 Query: 269 tc 270 || Sbjct: 283 tc 284
>gb|BT000122.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein (At4g34670) mRNA, complete cds Length = 581 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Minus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 278 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 219 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 218 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 159 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 158 gccttcacaaagagacgtgctaaccaagtgaa 127 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 434 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 375 Query: 269 tc 270 || Sbjct: 374 tc 373
>gb|AY062500.1| Arabidopsis thaliana Putative S-phase-specific ribosomal protein (At4g34670; T4L20.250) mRNA, complete cds Length = 1094 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 379 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 438 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 439 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 498 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 499 gccttcacaaagagacgtgctaaccaagtgaa 530 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 223 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 282 Query: 269 tc 270 || Sbjct: 283 tc 284
>emb|BX826401.1|CNS0A38P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 836 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 208 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 267 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 268 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 327 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 328 gccttcacaaagagacgtgctaaccaagtgaa 359 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 52 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 111 Query: 269 tc 270 || Sbjct: 112 tc 113
>emb|BX828268.1|CNS0A2YE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH6ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1008 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 364 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 423 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 424 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 483 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 484 gccttcacaaagagacgtgctaaccaagtgaa 515 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 208 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 267 Query: 269 tc 270 || Sbjct: 268 tc 269
>emb|AJ001342.1|ATCYC07 Arabidopsis thaliana mRNA for S-phase-specific ribosomal protein Length = 906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 365 tggggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacacta 424 ||||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | Sbjct: 301 tggggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttg 360 Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 ||||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| Sbjct: 361 attgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatc 420 Query: 485 ggcttcactaagagacgtcccaaccaagtgaa 516 | |||||| ||||||||| | ||||||||||| Sbjct: 421 gccttcacaaagagacgtgctaaccaagtgaa 452 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 209 tccaggacacaggggaccaagattgcatctgagggtcttaagcacagagtttttgaggtt 268 |||||||| ||||| ||||||||||| |||||||| || || ||||| || ||||||||| Sbjct: 145 tccaggactcagggtaccaagattgcctctgagggactgaaacacagggtgtttgaggtt 204 Query: 269 tc 270 || Sbjct: 205 tc 206
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 367 gggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaat 426 ||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | || Sbjct: 4326 gggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgat 4385 Query: 427 tgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcattgg 486 ||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| | Sbjct: 4386 tgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatcgc 4445 Query: 487 cttcactaagagacgtcccaaccaagtgaa 516 |||||| ||||||||| | ||||||||||| Sbjct: 4446 cttcacaaagagacgtgctaaccaagtgaa 4475
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 367 gggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaat 426 ||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | || Sbjct: 195247 gggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgat 195306 Query: 427 tgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcattgg 486 ||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| | Sbjct: 195307 tgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatcgc 195366 Query: 487 cttcactaagagacgtcccaaccaagtgaa 516 |||||| ||||||||| | ||||||||||| Sbjct: 195367 cttcacaaagagacgtgctaaccaagtgaa 195396
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project) Length = 125502 Score = 67.9 bits (34), Expect = 3e-08 Identities = 121/150 (80%) Strand = Plus / Plus Query: 367 gggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaat 426 ||||||||||||||| ||||||||||| || ||| | || | |||||||||||| | || Sbjct: 85558 gggtatggatttcacaaccgacaagctaaggtcattggtgaagaagtggcagactttgat 85617 Query: 427 tgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcattgg 486 ||| |||||||| ||||| || ||||| ||| |||| | || |||||||||| | Sbjct: 85618 tgaagcccatgtcgatgtgaaaaccacagacggctacaccttgaggatgttctgcatcgc 85677 Query: 487 cttcactaagagacgtcccaaccaagtgaa 516 |||||| ||||||||| | ||||||||||| Sbjct: 85678 cttcacaaagagacgtgctaaccaagtgaa 85707
>ref|XM_774945.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S3a, transcript variant 1 (LOC575056), mRNA Length = 1003 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 174 tgttcaacacccgcaacatcggcaagaccctcgtctccaggacacaggg 222 ||||||||| |||||||||||||||||| ||||| ||||||||||||| Sbjct: 120 tgttcaacatccgcaacatcggcaagactctcgtaaccaggacacaggg 168 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ctgttctgcattggcttcac 492 |||||||||||||||||||| Sbjct: 416 ctgttctgcattggcttcac 435
>ref|XM_796644.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein S3a, transcript variant 2 (LOC575056), mRNA Length = 749 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 174 tgttcaacacccgcaacatcggcaagaccctcgtctccaggacacaggg 222 ||||||||| |||||||||||||||||| ||||| ||||||||||||| Sbjct: 120 tgttcaacatccgcaacatcggcaagactctcgtaaccaggacacaggg 168 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 ctgttctgcattggcttcac 492 |||||||||||||||||||| Sbjct: 416 ctgttctgcattggcttcac 435
>ref|XM_785062.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC585229), partial mRNA Length = 327 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 174 tgttcaacacccgcaacatcggcaagaccctcgtctccaggacacaggg 222 ||||||||| |||||||||||||||||| ||||| ||||||||||||| Sbjct: 86 tgttcaacatccgcaacatcggcaagactctcgtaaccaggacacaggg 134
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcatt 484 |||||||| ||||| ||||| ||||| |||||||||||||||||||| |||| |||| Sbjct: 46703 attgaggctcatgtggatgtgaagacaactgacaattacatgctccgcatgtttgccatt 46644 Query: 485 ggcttcactaaga 497 |||||||| |||| Sbjct: 46643 ggcttcaccaaga 46631
>gb|BT019079.1| Zea mays clone Contig661.F mRNA sequence Length = 1229 Score = 63.9 bits (32), Expect = 5e-07 Identities = 101/124 (81%) Strand = Plus / Minus Query: 455 gacaattacatgctccggctgttctgcattggcttcactaagagacgtcccaaccaagtg 514 ||||| |||||||| || ||||||||||||| || || ||||| || || ||||| || Sbjct: 629 gacaactacatgctgcgtttgttctgcattggttttaccaagaggcgcccaaaccaggtc 570 Query: 515 aaacggacttgctatgctcaggcgagccagatcagacagattcgccggaagatggttgag 574 || | || |||||||||||||| |||||| | ||||||||||| |||||||||||| Sbjct: 569 aagagaacctgctatgctcaggcatcccagattcggcagattcgccgcaagatggttgag 510 Query: 575 atta 578 |||| Sbjct: 509 atta 506
>gb|AF479043.1| Triticum aestivum 40S ribosomal protein mRNA, partial cds Length = 342 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 521 acttgctatgctcaggcgagccagatcagacagattcgccggaagatggttgagat 576 ||||||||||| || || || |||||||||||||| ||||| |||||||||||||| Sbjct: 7 acttgctatgcccaagcaagtcagatcagacagatccgccgcaagatggttgagat 62
>gb|AY648734.1| Danio rerio 40S ribosomal protein S3a mRNA, complete cds Length = 864 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 73 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 132 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||| | ||||||||| | ||| ||||||| ||||| |||| ||||| ||||| ||||| Sbjct: 133 aacctgggcaagaccttggtcaccaggactcagggaaccagaattgcctctgatggtct 191 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagaccactga 456 ||||||||||||| | ||||||||||| ||||| || ||||||||||| Sbjct: 351 gaagtggcagacaatgattgaggcccacgttgacgtaaagaccactga 398
>gb|BC059543.1| Danio rerio ribosomal protein S3A, mRNA (cDNA clone MGC:73195 IMAGE:4788990), complete cds Length = 872 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 71 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 130 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||| | ||||||||| | ||| ||||||| ||||| |||| ||||| ||||| ||||| Sbjct: 131 aacctgggcaagaccttggtcaccaggactcagggaaccagaattgcctctgatggtct 189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagaccactga 456 ||||||||||||| | ||||||||||| ||||| || ||||||||||| Sbjct: 349 gaagtggcagacaatgattgaggcccacgttgacgtaaagaccactga 396
>ref|NM_200059.1| Danio rerio ribosomal protein S3A (rps3a), mRNA Length = 872 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 71 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 130 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||| | ||||||||| | ||| ||||||| ||||| |||| ||||| ||||| ||||| Sbjct: 131 aacctgggcaagaccttggtcaccaggactcagggaaccagaattgcctctgatggtct 189 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagaccactga 456 ||||||||||||| | ||||||||||| ||||| || ||||||||||| Sbjct: 349 gaagtggcagacaatgattgaggcccacgttgacgtaaagaccactga 396
>gb|BC078649.1| Danio rerio ribosomal protein S3A, mRNA (cDNA clone MGC:86672 IMAGE:6894801), complete cds Length = 904 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 92 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 151 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||| | ||||||||| | ||| ||||||| ||||| |||| ||||| ||||| ||||| Sbjct: 152 aacctgggcaagaccttggtcaccaggactcagggaaccagaattgcctctgatggtct 210 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagaccactga 456 ||||||||||||| | ||||||||||| ||||| || ||||||||||| Sbjct: 370 gaagtggcagacaatgattgaggcccacgttgacgtaaagaccactga 417
>gb|DQ268856.1| Solanum tuberosum clone 174A02 cyc07-like protein mRNA, complete cds Length = 1045 Score = 61.9 bits (31), Expect = 2e-06 Identities = 202/259 (77%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 ||||||| ||||| || ||||||| ||||| ||||||||||| || || || || || | Sbjct: 201 tcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggcctaaaac 260 Query: 252 acagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagga 311 ||||||| ||||| ||| | |||| || || ||| |||||||| ||||||||||||| Sbjct: 261 acagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttcagga 320 Query: 312 agatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggta 371 | ||| | | | ||||| ||||||||||| | |||||||||||||| || || | Sbjct: 321 aaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccatggaa 380 Query: 372 tggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgagg 431 |||||||||| || || ||| | || || || || | || |||||||| | ||||||| Sbjct: 381 tggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgattgagg 440 Query: 432 cccatgttgatgttaagac 450 ||||||||||||| ||||| Sbjct: 441 cccatgttgatgtaaagac 459 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 551 cagattcgccggaagatggttgagatta 578 ||||| ||| |||||||||||||||||| Sbjct: 560 cagatccgcaggaagatggttgagatta 587
>gb|DQ268849.1| Solanum tuberosum clone 155F06 cyc07-like protein mRNA, complete cds Length = 1038 Score = 61.9 bits (31), Expect = 2e-06 Identities = 202/259 (77%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 ||||||| ||||| || ||||||| ||||| ||||||||||| || || || || || | Sbjct: 185 tcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggcctaaaac 244 Query: 252 acagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagga 311 ||||||| ||||| ||| | |||| || || ||| |||||||| ||||||||||||| Sbjct: 245 acagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttcagga 304 Query: 312 agatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggta 371 | ||| | | | ||||| ||||||||||| | |||||||||||||| || || | Sbjct: 305 aaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccatggaa 364 Query: 372 tggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgagg 431 |||||||||| || || ||| | || || || || | || |||||||| | ||||||| Sbjct: 365 tggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgattgagg 424 Query: 432 cccatgttgatgttaagac 450 ||||||||||||| ||||| Sbjct: 425 cccatgttgatgtaaagac 443 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 551 cagattcgccggaagatggttgagatta 578 ||||| ||| |||||||||||||||||| Sbjct: 544 cagatccgcaggaagatggttgagatta 571
>gb|DQ252485.1| Solanum tuberosum clone 048H05 cyc07-like mRNA, complete cds Length = 998 Score = 61.9 bits (31), Expect = 2e-06 Identities = 202/259 (77%) Strand = Plus / Plus Query: 192 tcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggtcttaagc 251 ||||||| ||||| || ||||||| ||||| ||||||||||| || || || || || | Sbjct: 161 tcggcaaaacccttgttaccaggactcagggtaccaagattgcttcagatggcctaaaac 220 Query: 252 acagagtttttgaggtttccttggcagacctccagggtgatgaggaccaggctttcagga 311 ||||||| ||||| ||| | |||| || || ||| |||||||| ||||||||||||| Sbjct: 221 acagagtatttgaagttagcctggctgatcttcagaaggatgaggatcaggctttcagga 280 Query: 312 agatcagacttcgtgcagaggatgtgcaaggaaagaatgttctcacaaacttttggggta 371 | ||| | | | ||||| ||||||||||| | |||||||||||||| || || | Sbjct: 281 aaatccgtttgagagcagaagatgtgcaagggagaaatgttctcacaaatttccatggaa 340 Query: 372 tggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaattgagg 431 |||||||||| || || ||| | || || || || | || |||||||| | ||||||| Sbjct: 341 tggatttcacaacagataagttgaggtctctggtccgcaaatggcagactttgattgagg 400 Query: 432 cccatgttgatgttaagac 450 ||||||||||||| ||||| Sbjct: 401 cccatgttgatgtaaagac 419 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 551 cagattcgccggaagatggttgagatta 578 ||||| ||| |||||||||||||||||| Sbjct: 520 cagatccgcaggaagatggttgagatta 547
>gb|DQ268842.1| Solanum tuberosum clone 135C12 40S ribosomal protein S3a-like protein mRNA, complete cds Length = 1059 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 368 ggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaatt 427 |||||||| |||||||| || || | || |||||||||| ||| ||||| || | ||| Sbjct: 335 ggtatggacttcaccacagataaattgaggtcacttgtaaagaaatggcaatcattgatt 394 Query: 428 gaggcccatgttgatgttaagaccactga 456 ||||| ||||||||||||||||| ||||| Sbjct: 395 gaggctcatgttgatgttaagacaactga 423
>dbj|D26058.1|CTRCYC07A Catharanthus roseus cyc07 gene, exon1-7, complete cds Length = 4798 Score = 58.0 bits (29), Expect = 3e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 228 agattgcatctgagggtcttaagcacagagtttttgaggtttccttggcagacctccagg 287 ||||||| || |||||||| ||||| |||||||| ||| |||| | || || || |||| Sbjct: 3200 agattgcttccgagggtctcaagcatagagttttcgagatttctcttgctgatcttcagg 3259 Query: 288 gtgatgaggaccaggctttcaggaagatc 316 ||||||||||||| | |||||||||||| Sbjct: 3260 gtgatgaggaccactcattcaggaagatc 3288 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 434 catgttgatgttaagaccactgacaattacatgctccggctgttctgcattggcttcac 492 ||||||||||||||||| ||||||| |||| | || ||||||||||||||||||| Sbjct: 3497 catgttgatgttaagacaactgacagctacacattgaggatgttctgcattggcttcac 3555
>emb|CR354380.7| Zebrafish DNA sequence from clone CH211-182L2 in linkage group 1, complete sequence Length = 165344 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 103190 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 103249 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggacca 227 ||| | ||||||||| | ||| ||||||| ||||| |||| Sbjct: 103250 aacctgggcaagaccttggtcaccaggactcagggaacca 103289 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 425 attgaggcccatgttgatgttaagaccactga 456 ||||||||||||||||| || ||||||||||| Sbjct: 104986 attgaggcccatgttgacgtaaagaccactga 105017
>emb|BX005068.13| Zebrafish DNA sequence from clone DKEY-40H17 in linkage group 1, complete sequence Length = 215007 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 128 gatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgc 187 ||||| ||| ||||||||||||||||||| | ||||| || | ||||||||| |||| Sbjct: 120538 gatcctttctccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgc 120479 Query: 188 aacatcggcaagaccctcgtctccaggacacaggggacca 227 ||| | ||||||||| | ||| ||||||| ||||| |||| Sbjct: 120478 aacctgggcaagaccttggtcaccaggactcagggaacca 120439 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactga 456 ||||||||||| ||||| || ||||||||||| Sbjct: 118732 attgaggcccacgttgacgtaaagaccactga 118701
>ref|XM_862563.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 13 (RPS3A), mRNA Length = 1051 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 6 gccatggcggtcggcaagaacaagcgc 32
>ref|XM_862552.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 12 (RPS3A), mRNA Length = 1051 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 6 gccatggcggtcggcaagaacaagcgc 32
>ref|XM_862541.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 11 (RPS3A), mRNA Length = 852 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 50 gccatggcggtcggcaagaacaagcgc 76
>ref|XM_862533.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 10 (RPS3A), mRNA Length = 1065 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 18 gccatggcggtcggcaagaacaagcgc 44
>ref|XM_862525.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 9 (RPS3A), mRNA Length = 1056 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 49 gccatggcggtcggcaagaacaagcgc 75
>ref|XM_862515.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 8 (RPS3A), mRNA Length = 982 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 17 gccatggcggtcggcaagaacaagcgc 43
>ref|XM_862504.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 7 (RPS3A), mRNA Length = 912 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 17 gccatggcggtcggcaagaacaagcgc 43
>ref|XM_862496.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 6 (RPS3A), mRNA Length = 876 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 19 gccatggcggtcggcaagaacaagcgc 45
>ref|XM_534275.2| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 1 (RPS3A), mRNA Length = 1106 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 61 gccatggcggtcggcaagaacaagcgc 87
>ref|XM_862466.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 4 (RPS3A), mRNA Length = 769 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 16 gccatggcggtcggcaagaacaagcgc 42
>ref|XM_862454.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 3 (RPS3A), mRNA Length = 774 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 49 gccatggcggtcggcaagaacaagcgc 75
>ref|XM_862446.1| PREDICTED: Canis familiaris Ribosomal protein S3A, transcript variant 2 (RPS3A), mRNA Length = 553 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 18 gccatggcggtcggcaagaacaagcgc 44
>ref|XM_860742.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 7 (LOC609500), mRNA Length = 875 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 20 gccatggcggtcggcaagaacaagcgc 46
>ref|XM_860726.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 6 (LOC609500), mRNA Length = 857 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 20 gccatggcggtcggcaagaacaagcgc 46
>ref|XM_860710.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC609500), mRNA Length = 866 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 17 gccatggcggtcggcaagaacaagcgc 43
>ref|XM_860701.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC609500), mRNA Length = 1072 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 20 gccatggcggtcggcaagaacaagcgc 46
>ref|XM_860686.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC609500), mRNA Length = 879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 20 gccatggcggtcggcaagaacaagcgc 46
>ref|XM_847366.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC609500), mRNA Length = 1069 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 17 gccatggcggtcggcaagaacaagcgc 43
>ref|XM_860652.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC609500), mRNA Length = 760 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 15 gccatggcggtcggcaagaacaagcgc 41
>ref|XM_856691.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 12 (LOC608454), mRNA Length = 874 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856663.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 11 (LOC608454), mRNA Length = 875 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856635.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 10 (LOC608454), mRNA Length = 879 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856605.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 9 (LOC608454), mRNA Length = 883 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856573.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 8 (LOC608454), mRNA Length = 883 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856546.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 7 (LOC608454), mRNA Length = 882 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_856515.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 6 (LOC608454), mRNA Length = 1042 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 9 gccatggcggtcggcaagaacaagcgc 35
>ref|XM_856484.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC608454), mRNA Length = 1047 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 14 gccatggcggtcggcaagaacaagcgc 40
>ref|XM_856455.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC608454), mRNA Length = 1080 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 32 gccatggcggtcggcaagaacaagcgc 58
>ref|XM_845382.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC608454), mRNA Length = 1058 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 25 gccatggcggtcggcaagaacaagcgc 51
>ref|XM_856398.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608454), mRNA Length = 901 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 18 gccatggcggtcggcaagaacaagcgc 44
>ref|XM_535263.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608454), mRNA Length = 759 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||||||| Sbjct: 17 gccatggcggtcggcaagaacaagcgc 43
>gb|BC106115.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:117914 IMAGE:2599128), complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 13 ccatggcggtcggcaagaacaagcgc 38
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatg 466 |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 128692 attgaggctcatgtagatgtcaagacaactgacaattacatg 128651 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 427 tgaggcccatgttgatgttaagaccactgacaattacatgctccggctgttctgcattgg 486 |||||| |||| ||||| ||||| ||||||||||||||||| || |||| |||||| Sbjct: 128519 tgaggctcatgcagatgtcaagacaactgacaattacatgcttcgcatgtttgccattgg 128460 Query: 487 cttcactaaga 497 |||||| |||| Sbjct: 128459 cttcacaaaga 128449 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatg 466 ||||| || ||||| ||||| ||||| ||||||||||||||| Sbjct: 128804 attgaagctcatgtagatgtcaagacaactgacaattacatg 128763 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatg 466 |||||| | ||||| ||||| ||||| ||||||||||||||| Sbjct: 128748 attgagactcatgtagatgtcaagacaactgacaattacatg 128707
>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete sequence Length = 196911 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22653 ccatggcggtcggcaagaacaagcgc 22628
>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence Length = 212613 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 81044 ccatggcggtcggcaagaacaagcgc 81019
>gb|BC084675.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102469 IMAGE:5319512), complete cds Length = 869 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 15 ccatggcggtcggcaagaacaagcgc 40
>gb|BC083338.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102070 IMAGE:6820218), complete cds Length = 861 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 4 ccatggcggtcggcaagaacaagcgc 29
>ref|XM_871858.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 4 (LOC613340), mRNA Length = 872 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 32 ccatggcggtcggcaagaacaagcgc 57
>ref|XM_863937.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 1 (LOC613340), mRNA Length = 910 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 33 ccatggcggtcggcaagaacaagcgc 58
>ref|XM_871665.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 3 (LOC613340), mRNA Length = 587 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_871576.1| PREDICTED: Bos taurus similar to ribosomal protein S3a, transcript variant 2 (LOC613340), mRNA Length = 717 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 7 ccatggcggtcggcaagaacaagcgc 32
>ref|XM_872846.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 6 (LOC613460), mRNA Length = 918 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 34 ccatggcggtcggcaagaacaagcgc 59
>ref|XM_872754.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 5 (LOC613460), mRNA Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_593124.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC613460), mRNA Length = 876 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 34 ccatggcggtcggcaagaacaagcgc 59
>ref|XM_872539.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 4 (LOC613460), mRNA Length = 584 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 18 ccatggcggtcggcaagaacaagcgc 43
>ref|XM_872447.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 3 (LOC613460), mRNA Length = 714 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 7 ccatggcggtcggcaagaacaagcgc 32
>ref|XM_420443.1| PREDICTED: Gallus gallus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC422477), mRNA Length = 1423 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 662 ccatggcggtcggcaagaacaagcgc 687
>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence Length = 192136 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 21194 ccatggcggtcggcaagaacaagcgc 21219
>ref|NM_016959.2| Mus musculus ribosomal protein S3a (Rps3a), mRNA Length = 863 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>ref|XM_974769.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC674452), mRNA Length = 889 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22 ccatggcggtcggcaagaacaagcgc 47
>ref|XM_994545.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC668144), mRNA Length = 889 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22 ccatggcggtcggcaagaacaagcgc 47
>ref|XR_002919.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC544977), mRNA Length = 895 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22 ccatggcggtcggcaagaacaagcgc 47
>ref|XR_002253.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC668799), mRNA Length = 847 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 9 ccatggcggtcggcaagaacaagcgc 34
>ref|XR_005031.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC677290), mRNA Length = 853 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 9 ccatggcggtcggcaagaacaagcgc 34
>emb|Z83368.1|MMRPS3A M.musculus RPS3a gene Length = 5695 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 843 ccatggcggtcggcaagaacaagcgc 868
>emb|AJ720257.1| Gallus gallus partial mRNA for hypothetical protein, clone 13j13 Length = 107 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>gb|BC081451.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:102071 IMAGE:6824188), complete cds Length = 872 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 11 ccatggcggtcggcaagaacaagcgc 36
>gb|AF402811.1| Ictalurus punctatus 40S ribosomal protein S3a mRNA, partial cds Length = 842 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 125 gtcgatcccttcaccaagaaggactggtatgacataaaggcgccgacgttgttcaacacc 184 |||||||| ||| |||||||||||||||| || | || || ||| | ||||||| | | Sbjct: 60 gtcgatcctttctccaagaaggactggtacgatgttaaagccccggccatgttcaatatc 119 Query: 185 cgcaacatcggcaagaccctcgtctccaggacacaggggaccaagattgcatctgagggt 244 |||||| | |||||||| || ||| ||||||| ||||| |||| ||| || ||||| ||| Sbjct: 120 cgcaacctgggcaagactctggtcaccaggactcagggaaccaggatcgcctctgacggt 179 Query: 245 ct 246 || Sbjct: 180 ct 181 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagaccactgacaattacatgct 468 ||||||||||||| | |||||||| || || || || |||||||| ||| |||| |||| Sbjct: 341 gaagtggcagacaatgattgaggcgcacgtggacgtgaagaccacggacggttacctgct 400 Query: 469 ccggctgttctgcattggcttcactaaga 497 || ||||||||| | |||||||| |||| Sbjct: 401 gcgcctgttctgcgtgggcttcaccaaga 429
>dbj|AK146304.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730048K19 product:ribosomal protein S3a, full insert sequence Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 32 ccatggcggtcggcaagaacaagcgc 57
>dbj|AK135318.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720473N01 product:ribosomal protein S3a, full insert sequence Length = 864 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 25 ccatggcggtcggcaagaacaagcgc 50
>dbj|AK151982.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830044H24 product:ribosomal protein S3a, full insert sequence Length = 873 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 34 ccatggcggtcggcaagaacaagcgc 59
>dbj|AK150814.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015K17 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK150796.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015H22 product:ribosomal protein S3a, full insert sequence Length = 873 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 34 ccatggcggtcggcaagaacaagcgc 59
>dbj|AK148513.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820015M15 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK151429.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830030B03 product:ribosomal protein S3a, full insert sequence Length = 864 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 25 ccatggcggtcggcaagaacaagcgc 50
>dbj|AK150441.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830007K16 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK166713.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0005O17 product:40S ribosomal protein S3a homolog [Mus musculus], full insert sequence Length = 865 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22 ccatggcggtcggcaagaacaagcgc 47
>dbj|AK153480.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830165N20 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK167562.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530022H01 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 23 ccatggcggtcggcaagaacaagcgc 48
>dbj|AK167512.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530018C11 product:ribosomal protein S3a, full insert sequence Length = 870 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 25 ccatggcggtcggcaagaacaagcgc 50
>dbj|AK159777.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420030N20 product:ribosomal protein S3a, full insert sequence Length = 869 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK168240.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730070G06 product:ribosomal protein S3a, full insert sequence Length = 868 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 22 ccatggcggtcggcaagaacaagcgc 47
>dbj|AK010605.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library, clone:2410029J05 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>dbj|AK003158.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1100001E09 product:ribosomal protein S3a, full insert sequence Length = 863 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>dbj|AK088113.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004H05 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>dbj|AK050610.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:C920016J02 product:ribosomal protein S3a, full insert sequence Length = 862 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 24 ccatggcggtcggcaagaacaagcgc 49
>gb|BC039659.1| Mus musculus ribosomal protein S3a, mRNA (cDNA clone MGC:49186 IMAGE:5025347), complete cds Length = 877 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 23 ccatggcggtcggcaagaacaagcgc 48
>dbj|AK012345.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700038N16 product:ribosomal protein S3a, full insert sequence Length = 860 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 21 ccatggcggtcggcaagaacaagcgc 46
>gb|AC112969.12| Mus musculus chromosome 8, clone RP24-331K7, complete sequence Length = 164201 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 92494 ccatggcggtcggcaagaacaagcgc 92469
>dbj|AK196258.1| Mus musculus cDNA, clone:Y1G0121E15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000029722, based on BLAT search Length = 282 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 10 ccatggcggtcggcaagaacaagcgc 35
>emb|CT571277.10| Mouse DNA sequence from clone RP24-327L5 on chromosome 14, complete sequence Length = 142749 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 34611 ccatggcggtcggcaagaacaagcgc 34586
>gb|AF042107.1|AF042107 Eimeria tenella ribosomal protein S3a mRNA, complete cds Length = 858 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 5 ccatggcggtcggcaagaacaagcgc 30
>emb|X68555.1|ACKRPA A.californica KRP-A gene Length = 849 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 409 gaagtggcagacactaattgaggcccatgttgatgttaagac 450 |||||||||||| || ||||||||| |||||||||| ||||| Sbjct: 354 gaagtggcagactcttattgaggccaatgttgatgtgaagac 395
>emb|AL691416.9| Mouse DNA sequence from clone RP23-110I8 on chromosome 2, complete sequence Length = 208363 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||||||||||||||||||| Sbjct: 155042 ccatggcggtcggcaagaacaagcgc 155017
>gb|DQ268835.1| Solanum tuberosum clone 115A11 cyc07-like protein mRNA, complete cds Length = 1020 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 290 gatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaat 349 |||||||| ||||||| |||||||||| | | | ||||| ||||||||||| | |||| Sbjct: 269 gatgaggatcaggcttacaggaagatccgcttgagagcagaagatgtgcaagggaggaat 328 Query: 350 gttctcacaaactt 363 || ||||||||||| Sbjct: 329 gtcctcacaaactt 342
>gb|DQ252490.1| Solanum tuberosum clone 059D09 cyc07-like mRNA, complete cds Length = 996 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 290 gatgaggaccaggctttcaggaagatcagacttcgtgcagaggatgtgcaaggaaagaat 349 |||||||| ||||||| |||||||||| | | | ||||| ||||||||||| | |||| Sbjct: 247 gatgaggatcaggcttacaggaagatccgcttgagagcagaagatgtgcaagggaggaat 306 Query: 350 gttctcacaaactt 363 || ||||||||||| Sbjct: 307 gtcctcacaaactt 320
>dbj|AB023436.1| Hordeum vulgare DNA, down stream region of HvNAS1 gene Length = 10603 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 425 attgaggcccatgttgatgttaagaccactgacaattacatg 466 |||||||| ||||| ||||| ||||| ||||||||||||||| Sbjct: 5117 attgaggctcatgtagatgtcaagacaactgacaattacatg 5076
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 415 gcagacactaattgaggcccatgttgatgttaagaccactgacaattacatgctccg 471 |||||| || |||||||| |||| ||||| ||||| |||||||| ||||||||||| Sbjct: 3401 gcagaccctcattgaggctcatgcagatgtcaagacaactgacaactacatgctccg 3457
>gb|BT012853.1| Lycopersicon esculentum clone 113933F, mRNA sequence Length = 1053 Score = 50.1 bits (25), Expect = 0.008 Identities = 73/89 (82%) Strand = Plus / Plus Query: 368 ggtatggatttcaccaccgacaagcttagatcacttgtaaggaagtggcagacactaatt 427 ||||||||||||||||| || || | || ||||| |||| ||| ||||| || | ||| Sbjct: 375 ggtatggatttcaccacagataaattgaggtcactggtaaagaaatggcaatcattgatt 434 Query: 428 gaggcccatgttgatgttaagaccactga 456 ||||| |||||||| |||||||| ||||| Sbjct: 435 gaggctcatgttgacgttaagacaactga 463
>ref|XM_505043.1| Yarrowia lipolytica CLIB122, YALI0F05676g predicted mRNA Length = 744 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 125 gtcgatcccttcaccaagaaggactggta 153 ||||| ||||||||||||||||||||||| Sbjct: 37 gtcgaccccttcaccaagaaggactggta 65
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 125 gtcgatcccttcaccaagaaggactggta 153 ||||| ||||||||||||||||||||||| Sbjct: 843077 gtcgaccccttcaccaagaaggactggta 843049
>ref|XM_875949.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 8 (LOC613769), mRNA Length = 900 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 50 ccatggcggtcggcaagaacaag 72
>ref|XM_875867.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 7 (LOC613769), mRNA Length = 879 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 40 ccatggcggtcggcaagaacaag 62
>ref|XM_875801.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 6 (LOC613769), mRNA Length = 884 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 40 ccatggcggtcggcaagaacaag 62
>ref|XM_875730.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 5 (LOC613769), mRNA Length = 871 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 21 ccatggcggtcggcaagaacaag 43
>ref|XM_875654.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 4 (LOC613769), mRNA Length = 890 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 40 ccatggcggtcggcaagaacaag 62
>ref|XM_875583.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 3 (LOC613769), mRNA Length = 878 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 40 ccatggcggtcggcaagaacaag 62
>ref|XM_865235.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC613769), mRNA Length = 876 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaag 85 ||||||||||||||||||||||| Sbjct: 40 ccatggcggtcggcaagaacaag 62
>ref|XM_855573.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC608684), mRNA Length = 875 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 9 gccatggtggtcggcaagaacaagcgc 35
>ref|XM_844989.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608684), mRNA Length = 886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 20 gccatggtggtcggcaagaacaagcgc 46
>ref|XM_855510.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608684), mRNA Length = 717 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 6 gccatggtggtcggcaagaacaagcgc 32
>ref|XM_855476.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC608684), mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 9 gccatggtggtcggcaagaacaagcgc 35
>ref|XM_844705.1| PREDICTED: Canis familiaris similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC607868), mRNA Length = 1106 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 66 tggcggtcggcaagaacaagcgc 88 ||||||||||||||||||||||| Sbjct: 75 tggcggtcggcaagaacaagcgc 97
>ref|XM_851147.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 5 (LOC607193), mRNA Length = 857 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 9 gccatggtggtcggcaagaacaagcgc 35
>ref|XM_851102.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC607193), mRNA Length = 866 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 9 gccatggtggtcggcaagaacaagcgc 35
>ref|XM_851056.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC607193), mRNA Length = 718 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 7 gccatggtggtcggcaagaacaagcgc 33
>ref|XM_843347.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC607193), mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||| ||||||||||||||||||| Sbjct: 9 gccatggtggtcggcaagaacaagcgc 35
>ref|XM_843648.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC478437), mRNA Length = 891 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||| ||||||||| Sbjct: 5 gccatggcggtcggcaaaaacaagcgc 31
>ref|XM_535614.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC478437), mRNA Length = 755 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||| ||||||||| Sbjct: 10 gccatggcggtcggcaaaaacaagcgc 36
>ref|XM_534831.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC608748), mRNA Length = 886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||| ||||||||||||||| Sbjct: 26 gccatggcggtaggcaagaacaagcgc 52
>ref|XM_859165.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 4 (LOC608748), mRNA Length = 720 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||| ||||||||||||||| Sbjct: 21 gccatggcggtaggcaagaacaagcgc 47
>ref|XM_859142.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 3 (LOC608748), mRNA Length = 573 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||| ||||||||||||||| Sbjct: 15 gccatggcggtaggcaagaacaagcgc 41
>ref|XM_534259.2| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 1 (LOC477063), mRNA Length = 579 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||| ||||||||||||| Sbjct: 15 gccatggcggtcgacaagaacaagcgc 41
>ref|XM_846199.1| PREDICTED: Canis familiaris similar to ribosomal protein S3a, transcript variant 2 (LOC477063), mRNA Length = 772 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 62 gccatggcggtcggcaagaacaagcgc 88 ||||||||||||| ||||||||||||| Sbjct: 2 gccatggcggtcgacaagaacaagcgc 28
>ref|XM_519223.1| PREDICTED: Pan troglodytes similar to ribosomal protein S3a; 40S ribosomal protein S3a; v-fos transformation effector protein 1 (LOC463560), mRNA Length = 649 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 143 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 192 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 6 ccatggcggttggcaagaacaagcgc 31
>ref|XM_526720.1| PREDICTED: Pan troglodytes similar to Rps3a-prov protein (LOC471338), mRNA Length = 579 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 136 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 185 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 65 atggcggtcggcaagaacaagcgc 88 |||||||| ||||||||||||||| Sbjct: 1 atggcggttggcaagaacaagcgc 24
>ref|NM_001034038.1| Bos taurus ribosomal protein S3A (RPS3A), mRNA Length = 865 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||| |||||| Sbjct: 25 ccatggcggtcggcaagaataagcgc 50
>ref|XM_868916.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC515006), mRNA Length = 531 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 65 atggcggtcggcaagaacaagc 86 |||||||||||||||||||||| Sbjct: 1 atggcggtcggcaagaacaagc 22
>gb|BC058483.1| Rattus norvegicus ribosomal protein S3a, mRNA (cDNA clone MGC:72868 IMAGE:6887884), complete cds Length = 896 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||| |||||||||||| Sbjct: 28 ccatggcggtcgggaagaacaagcgc 53
>gb|AC093799.2| Homo sapiens BAC clone RP11-307C18 from 7, complete sequence Length = 156195 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 74342 ccatggcggttggcaagaacaagcgc 74317 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 74205 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 74156
>ref|XR_003814.1| PREDICTED: Mus musculus similar to 40S ribosomal protein S3a (LOC670633), mRNA Length = 893 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 34 ccatggcggttggcaagaacaagcgc 59
>gb|BC045105.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone IMAGE:3160242), **** WARNING: chimeric clone **** Length = 2436 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 1716 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 1765 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 1579 ccatggcggttggcaagaacaagcgc 1604
>gb|BC023666.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone IMAGE:5022252), **** WARNING: chimeric clone **** Length = 1551 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 808 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 857 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 671 ccatggcggttggcaagaacaagcgc 696
>emb|CR701956.2|CNS0G4KW Tetraodon nigroviridis full-length cDNA Length = 861 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 cccttcaccaagaaggactggtatga 156 |||||| ||||||||||||||||||| Sbjct: 91 cccttctccaagaaggactggtatga 116
>emb|CR655410.2|CNS0F4OO Tetraodon nigroviridis full-length cDNA Length = 862 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 131 cccttcaccaagaaggactggtatga 156 |||||| ||||||||||||||||||| Sbjct: 92 cccttctccaagaaggactggtatga 117
>gb|BC094829.1| Homo sapiens cDNA clone IMAGE:4647813, **** WARNING: chimeric clone **** Length = 1415 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 693 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 742 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 556 ccatggcggttggcaagaacaagcgc 581
>gb|BC099924.1| Homo sapiens cDNA clone IMAGE:6371780, **** WARNING: chimeric clone **** Length = 2186 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 1463 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 1512 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 1326 ccatggcggttggcaagaacaagcgc 1351
>gb|BC011660.1| Homo sapiens cDNA clone IMAGE:4120690, **** WARNING: chimeric clone **** Length = 2268 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 1545 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 1594 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 1408 ccatggcggttggcaagaacaagcgc 1433
>gb|BC021075.1| Homo sapiens cDNA clone IMAGE:3530401, **** WARNING: chimeric clone **** Length = 1553 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 808 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 857 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 671 ccatggcggttggcaagaacaagcgc 696
>gb|BC066926.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:87201 IMAGE:4826149), complete cds Length = 881 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 160 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 209
>gb|BC004981.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:3883 IMAGE:2906117), complete cds Length = 891 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 148 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 11 ccatggcggttggcaagaacaagcgc 36
>emb|CR860858.1| Pongo pygmaeus mRNA; cDNA DKFZp469E172 (from clone DKFZp469E172) Length = 923 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 176 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 225 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 39 ccatggcggttggcaagaacaagcgc 64
>gb|AC095055.3| Homo sapiens BAC clone RP11-372K14 from 4, complete sequence Length = 183478 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 36382 ccatggcggttggcaagaacaagcgc 36407
>gb|AC090771.4| Homo sapiens chromosome 18, clone RP11-795H16, complete sequence Length = 186031 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 90361 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 90410
>gb|BC102789.1| Bos taurus ribosomal protein S3A, mRNA (cDNA clone MGC:127088 IMAGE:7943245), complete cds Length = 899 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||| |||||| Sbjct: 21 ccatggcggtcggcaagaataagcgc 46
>ref|XM_944491.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 10 (LOC400652), mRNA Length = 870 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 162 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 211
>ref|XM_944488.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 9 (LOC400652), mRNA Length = 861 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 162 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 211
>ref|XM_944486.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 8 (LOC400652), mRNA Length = 900 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 172 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 221
>ref|XM_940167.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 6 (LOC400652), mRNA Length = 734 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 156 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 205
>ref|XM_931855.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 5 (LOC400652), mRNA Length = 871 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 172 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 221
>ref|XM_931846.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 4 (LOC400652), mRNA Length = 880 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 172 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 221
>ref|XM_931841.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 3 (LOC400652), mRNA Length = 900 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 172 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 221
>ref|XM_927103.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a, transcript variant 2 (LOC400652), mRNA Length = 734 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 156 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 205
>ref|XR_001455.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein) (LOC641829), mRNA Length = 731 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 153 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 202 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 16 ccatggcggttggcaagaacaagcgc 41
>ref|XR_001456.1| PREDICTED: Homo sapiens similar to ribosomal protein S3a (LOC649582), mRNA Length = 731 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 153 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 202 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 16 ccatggcggttggcaagaacaagcgc 41
>ref|XR_001449.1| PREDICTED: Homo sapiens similar to ribosomal protein S3a (LOC644972), mRNA Length = 731 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 153 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 202 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 16 ccatggcggttggcaagaacaagcgc 41
>ref|XM_943063.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 6 (LOC402677), mRNA Length = 878 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 170 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 219
>ref|XM_943058.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 5 (LOC402677), mRNA Length = 850 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 157 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 206
>ref|XM_943052.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 4 (LOC402677), mRNA Length = 867 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 157 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 206
>ref|XM_380021.2| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 1 (LOC402677), mRNA Length = 815 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 157 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 206
>ref|XM_936883.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 2 (LOC402677), mRNA Length = 761 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 157 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 206
>ref|XM_943039.1| PREDICTED: Homo sapiens similar to 40S ribosomal protein S3a (V-fos transformation effector protein), transcript variant 3 (LOC402677), mRNA Length = 708 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 154 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 203
>dbj|AB169748.1| Macaca fascicularis brain cDNA, clone: QnpA-15704, similar to human ribosomal protein S3A (RPS3A), mRNA, RefSeq: NM_001006.2 Length = 915 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 193 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 242 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 56 ccatggcggttggcaagaacaagcgc 81 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 410 aagtggcagacactaattgaggcccatgttgatgttaagac 450 |||||||||||| | ||||| || ||||||||||| ||||| Sbjct: 403 aagtggcagacaatgattgaagctcatgttgatgtcaagac 443
>gb|AC090621.10| Homo sapiens chromosome 18, clone RP11-396N11, complete sequence Length = 188858 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| ||| || ||||||| ||||| ||||| ||||||||||| ||||| Sbjct: 183685 aagacgctcatcaccaggacccagggaaccaaaattgcatctgatggtct 183636
>gb|AC020925.8| Homo sapiens chromosome 5 clone CTD-2134K2, complete sequence Length = 161452 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 116658 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 116609
>gb|AY550961.1| Sparus aurata V-Fos transformation effector-like protein mRNA, partial cds Length = 758 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Plus Query: 138 ccaagaaggactggtatgacataaaggcgccgacgttgttcaacacccgcaacatcggca 197 ||||||||||||||||||| | ||||| || | ||||||||| |||||| | |||| Sbjct: 92 ccaagaaggactggtatgatgtcaaggcaccagccatgttcaacatccgcaatcttggca 151 Query: 198 agaccctcgtctccaggacacaggggacca 227 ||||| | ||| ||||||| ||||| |||| Sbjct: 152 agaccttggtcaccaggacccagggaacca 181
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 75195 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 75244
>ref|NM_017153.1| Rattus norvegicus ribosomal protein S3a (Rps3a), mRNA Length = 880 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||| |||||||||||| Sbjct: 23 ccatggcggtcgggaagaacaagcgc 48
>gb|AY911372.1| Bos taurus clone IMAGE:7961511 ribosomal protein S3a mRNA, complete cds Length = 865 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||| |||||| Sbjct: 25 ccatggcggtcggcaagaataagcgc 50
>gb|BC001708.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:1626 IMAGE:3544072), complete cds Length = 906 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 178 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 227 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 41 ccatggcggttggcaagaacaagcgc 66
>gb|BC071916.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:88598 IMAGE:6285242), complete cds Length = 868 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 148 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 11 ccatggcggttggcaagaacaagcgc 36
>gb|BC017123.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:18002 IMAGE:3922810), complete cds Length = 869 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 148 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 11 ccatggcggttggcaagaacaagcgc 36
>gb|BC030161.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:29710 IMAGE:5020904), complete cds Length = 921 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 199 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 248 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 62 ccatggcggttggcaagaacaagcgc 87
>gb|BC019072.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:29668 IMAGE:5020581), complete cds Length = 925 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 199 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 248 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 62 ccatggcggttggcaagaacaagcgc 87
>gb|BC000204.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:3109 IMAGE:3350750), complete cds Length = 866 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 148 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 11 ccatggcggttggcaagaacaagcgc 36
>gb|BC009219.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:16359 IMAGE:3927639), complete cds Length = 869 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 148 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 197 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 11 ccatggcggttggcaagaacaagcgc 36
>gb|BC009404.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:15425 IMAGE:4308955), complete cds Length = 873 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 150 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 199 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 13 ccatggcggttggcaagaacaagcgc 38
>dbj|AK129825.1| Homo sapiens cDNA FLJ26315 fis, clone DMC09112, highly similar to 40S ribosomal protein S3A Length = 861 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 159 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 208 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 22 ccatggcggttggcaagaacaagcgc 47
>gb|AC004841.2|AC004841 Homo sapiens PAC clone RP4-607J23 from 7q21.2-q31.1, complete sequence Length = 132072 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 85735 ccatggcggttggcaagaacaagcgc 85710 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 85598 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 85549
>ref|NM_001006.3| Homo sapiens ribosomal protein S3A (RPS3A), mRNA Length = 930 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 187 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 236 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 50 ccatggcggttggcaagaacaagcgc 75
>emb|X75161.1|RNRNAS3A R.norvegicus (Sprague-Dawley) mRNA for ribosomal protein S3a Length = 880 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||| |||||||||||| Sbjct: 23 ccatggcggtcgggaagaacaagcgc 48
>emb|Z83334.1|HSZ83334 H.sapiens RPS3a gene Length = 5107 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 119 ccatggcggttggcaagaacaagcgc 144
>dbj|AB099017.1| Bos taurus mRNA for similar to ribosomal protein S3a, partial cds, clone: ORCS12387 Length = 644 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 ||||||||||||||||||| |||||| Sbjct: 5 ccatggcggtcggcaagaataagcgc 30
>gb|AC129329.3| Mus musculus BAC clone RP23-43M12 from 10, complete sequence Length = 176092 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 48108 ccatggcggttggcaagaacaagcgc 48133
>gb|BC070211.1| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:88192 IMAGE:5809691), complete cds Length = 892 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 161 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 210 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 24 ccatggcggttggcaagaacaagcgc 49
>gb|BC018954.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone IMAGE:4136755) Length = 890 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 150 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 199 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 13 ccatggcggttggcaagaacaagcgc 38
>gb|BC006298.2| Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:13266 IMAGE:4079651), complete cds Length = 871 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 141 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 190 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 4 ccatggcggttggcaagaacaagcgc 29
>emb|AL845262.3| Mouse DNA sequence from clone RP23-14N22 on chromosome 2, complete sequence Length = 207718 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 62195 ccatggcggttggcaagaacaagcgc 62220
>gb|M77234.1|HUMRPSA3A Human ribosomal protein S3a mRNA, complete cds Length = 857 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 153 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 202 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 64 catggcggtcggcaagaacaagcgc 88 ||||||||| ||||||||||||||| Sbjct: 17 catggcggttggcaagaacaagcgc 41
>gb|M84711.1|HUMFTE1A Human v-fos transformation effector protein (Fte-1), mRNA complete cds Length = 874 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 197 aagaccctcgtctccaggacacaggggaccaagattgcatctgagggtct 246 ||||| |||||| ||||||| || || ||||| ||||||||||| ||||| Sbjct: 172 aagacgctcgtcaccaggacccaaggaaccaaaattgcatctgatggtct 221 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 63 ccatggcggtcggcaagaacaagcgc 88 |||||||||| ||||||||||||||| Sbjct: 35 ccatggcggttggcaagaacaagcgc 60 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,288,377 Number of Sequences: 3902068 Number of extensions: 4288377 Number of successful extensions: 78745 Number of sequences better than 10.0: 309 Number of HSP's better than 10.0 without gapping: 304 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 77869 Number of HSP's gapped (non-prelim): 830 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)