Clone Name | bah62m02 |
---|---|
Clone Library Name | barley_pub |
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%) Frame = +3 Query: 6 TRPSRXPVLVPQPPTCRPVHPG-----GAAGLEVGT 98 T P+R + P PP RP HPG GA G +GT Sbjct: 492 TAPTRVVIARPTPPQARPSHPGGPPVSGALGAGLGT 527
>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) (Protein G3) Length = 1132 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 Query: 6 TRPSRXPVLVPQPPTCRPVHPGG 74 T P+R + P PP RP HPGG Sbjct: 497 TAPTRVVIARPTPPQARPSHPGG 519
>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1154 Score = 31.2 bits (69), Expect = 2.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 Query: 6 TRPSRXPVLVPQPPTCRPVHPGG 74 T P+R + P PP RP HPGG Sbjct: 498 TAPTRVVIARPTPPQARPSHPGG 520
>SPEA_NEIMB (Q9K0U3) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)| Length = 630 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 389 GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIK 499 GQ T D+D +AD++ + DPK+ R E+I+ Sbjct: 565 GQFTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIE 601
>SPEA_NEIMA (Q9JT25) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)| Length = 630 Score = 30.0 bits (66), Expect = 4.6 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 389 GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIK 499 GQ T D+D +AD++ + DPK+ R E+I+ Sbjct: 565 GQFTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIE 601
>ICK_HUMAN (Q9UPZ9) Serine/threonine-protein kinase ICK (EC 2.7.11.22)| (Intestinal cell kinase) (hICK) (MAK-related kinase) (MRK) (Laryngeal cancer kinase 2) (LCK2) Length = 632 Score = 29.3 bits (64), Expect = 7.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 Query: 6 TRPSRXPVLVPQPPTCRPVH 65 T+P P L+P+PP +PVH Sbjct: 600 TQPRSTPGLIPRPPAAQPVH 619
>DAB_DROME (P98081) Protein disabled| Length = 2224 Score = 29.3 bits (64), Expect = 7.9 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = +2 Query: 389 GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIKKKRHKIVQ 523 GQ +DD D D DY DD ER+ ++RH++ Q Sbjct: 1909 GQRNDDDDDDDE-------DYVDDEPPTDEDKFERLNRRRHEMHQ 1946
>ARFG3_MOUSE (Q9D8S3) ADP-ribosylation factor GTPase-activating protein 3 (ARF| GAP 3) Length = 525 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%) Frame = -2 Query: 105 RRVFRPLGQPRRRDER---GGTSEVEEPRLGXGRASCR 1 R ++ L R++DER G +VE RLG G SCR Sbjct: 277 RLAYKDLEISRKKDERLNLSGQKKVEAERLGMGFGSCR 314
>PALF_MAGGR (Q52FM1) pH-response regulator protein palF/RIM8| Length = 770 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +1 Query: 460 SQESPVPYGGEDKEEAAQDRAGQDRLAQSH 549 SQ V YG EDK+ A + AGQ+ SH Sbjct: 521 SQIPTVGYGPEDKQRAQSEPAGQEDYVHSH 550
>ICK_MOUSE (Q9JKV2) Serine/threonine-protein kinase ICK (EC 2.7.11.22)| (Intestinal cell kinase) (mICK) (MAK-related kinase) (MRK) Length = 629 Score = 29.3 bits (64), Expect = 7.9 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +3 Query: 6 TRPSRXPVLVPQPPTCRPVH 65 T+P P L+P+PP +PVH Sbjct: 597 TQPRSTPGLIPRPPAAQPVH 616 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,946,124 Number of Sequences: 219361 Number of extensions: 750494 Number of successful extensions: 2912 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2912 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)