ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62m02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associa... 32 1.2
2BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-assoc... 31 2.1
3BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc... 31 2.1
4SPEA_NEIMB (Q9K0U3) Biosynthetic arginine decarboxylase (EC 4.1.... 30 4.6
5SPEA_NEIMA (Q9JT25) Biosynthetic arginine decarboxylase (EC 4.1.... 30 4.6
6ICK_HUMAN (Q9UPZ9) Serine/threonine-protein kinase ICK (EC 2.7.1... 29 7.9
7DAB_DROME (P98081) Protein disabled 29 7.9
8ARFG3_MOUSE (Q9D8S3) ADP-ribosylation factor GTPase-activating p... 29 7.9
9PALF_MAGGR (Q52FM1) pH-response regulator protein palF/RIM8 29 7.9
10ICK_MOUSE (Q9JKV2) Serine/threonine-protein kinase ICK (EC 2.7.1... 29 7.9

>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +3

Query: 6   TRPSRXPVLVPQPPTCRPVHPG-----GAAGLEVGT 98
           T P+R  +  P PP  RP HPG     GA G  +GT
Sbjct: 492 TAPTRVVIARPTPPQARPSHPGGPPVSGALGAGLGT 527



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>BAT3_HUMAN (P46379) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3) (Protein G3)
          Length = 1132

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   TRPSRXPVLVPQPPTCRPVHPGG 74
           T P+R  +  P PP  RP HPGG
Sbjct: 497 TAPTRVVIARPTPPQARPSHPGG 519



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>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 6   TRPSRXPVLVPQPPTCRPVHPGG 74
           T P+R  +  P PP  RP HPGG
Sbjct: 498 TAPTRVVIARPTPPQARPSHPGG 520



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>SPEA_NEIMB (Q9K0U3) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)|
          Length = 630

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 389 GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIK 499
           GQ T  D+D    +AD++   + DPK+   R  E+I+
Sbjct: 565 GQFTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIE 601



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>SPEA_NEIMA (Q9JT25) Biosynthetic arginine decarboxylase (EC 4.1.1.19) (ADC)|
          Length = 630

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 389 GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIK 499
           GQ T  D+D    +AD++   + DPK+   R  E+I+
Sbjct: 565 GQFTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIE 601



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>ICK_HUMAN (Q9UPZ9) Serine/threonine-protein kinase ICK (EC 2.7.11.22)|
           (Intestinal cell kinase) (hICK) (MAK-related kinase)
           (MRK) (Laryngeal cancer kinase 2) (LCK2)
          Length = 632

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   TRPSRXPVLVPQPPTCRPVH 65
           T+P   P L+P+PP  +PVH
Sbjct: 600 TQPRSTPGLIPRPPAAQPVH 619



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>DAB_DROME (P98081) Protein disabled|
          Length = 2224

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +2

Query: 389  GQHTEDDHDHDPEIADIMGDYFDDPKKAQSRMEERIKKKRHKIVQ 523
            GQ  +DD D D        DY DD         ER+ ++RH++ Q
Sbjct: 1909 GQRNDDDDDDDE-------DYVDDEPPTDEDKFERLNRRRHEMHQ 1946



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>ARFG3_MOUSE (Q9D8S3) ADP-ribosylation factor GTPase-activating protein 3 (ARF|
           GAP 3)
          Length = 525

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = -2

Query: 105 RRVFRPLGQPRRRDER---GGTSEVEEPRLGXGRASCR 1
           R  ++ L   R++DER    G  +VE  RLG G  SCR
Sbjct: 277 RLAYKDLEISRKKDERLNLSGQKKVEAERLGMGFGSCR 314



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>PALF_MAGGR (Q52FM1) pH-response regulator protein palF/RIM8|
          Length = 770

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 460 SQESPVPYGGEDKEEAAQDRAGQDRLAQSH 549
           SQ   V YG EDK+ A  + AGQ+    SH
Sbjct: 521 SQIPTVGYGPEDKQRAQSEPAGQEDYVHSH 550



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>ICK_MOUSE (Q9JKV2) Serine/threonine-protein kinase ICK (EC 2.7.11.22)|
           (Intestinal cell kinase) (mICK) (MAK-related kinase)
           (MRK)
          Length = 629

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 6   TRPSRXPVLVPQPPTCRPVH 65
           T+P   P L+P+PP  +PVH
Sbjct: 597 TQPRSTPGLIPRPPAAQPVH 616


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,946,124
Number of Sequences: 219361
Number of extensions: 750494
Number of successful extensions: 2912
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2912
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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