ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62l24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PARK7_RAT (O88767) Protein DJ-1 (Contraception-associated protei... | 57 | 5e-08 | 2 | PARK7_HUMAN (Q99497) Protein DJ-1 (Oncogene DJ1) | 57 | 6e-08 | 3 | PARK7_MOUSE (Q99LX0) Protein DJ-1 | 55 | 2e-07 | 4 | THIJ_ECOLI (Q46948) Protein thiJ | 47 | 7e-07 | 5 | THIJ_SALTY (P55880) Protein thiJ | 47 | 7e-07 | 6 | YDB3_SCHPO (Q10356) Hypothetical protein C22E12.03c in chromosome I | 39 | 3e-04 | 7 | VE2_HPV55 (Q80937) Regulatory protein E2 | 33 | 0.91 | 8 | Y1560_STAES (Q8CRV8) Hypothetical protein SE_1560 | 32 | 2.0 | 9 | Y1413_STAEQ (Q5HN59) Hypothetical protein SERP1413 | 32 | 2.0 | 10 | P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150... | 32 | 2.0 | 11 | Y1625_STAS1 (Q49WT1) Hypothetical protein SSP1625 | 31 | 3.5 | 12 | PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing famil... | 31 | 3.5 | 13 | POLG_HCVJ2 (P27959) Genome polyprotein [Contains: Core protein p... | 30 | 7.7 |
|---|
>PARK7_RAT (O88767) Protein DJ-1 (Contraception-associated protein 1) (CAP1| protein) (Fertility protein SP22) Length = 189 Score = 57.0 bits (136), Expect = 5e-08 Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKI-XXXXXXXXXX 276 K+ L+ + G E +E IP+DI+RRAG VTVA V+ V I Sbjct: 4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKT 63 Query: 277 XXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGL 390 YD++VLPGG GA NL A ++ IL++ + GL Sbjct: 64 QGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGL 101 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P TS EFALA+VE L GK+ Q+ Sbjct: 158 PGTSFEFALAIVEALSGKDMANQV 181
>PARK7_HUMAN (Q99497) Protein DJ-1 (Oncogene DJ1)| Length = 189 Score = 56.6 bits (135), Expect = 6e-08 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKI-XXXXXXXXXX 276 K+ L+ + G E +E IP+D++RRAG VTVA V+ V I Sbjct: 4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKK 63 Query: 277 XXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGL 390 YD++VLPGG GA NL A ++ IL++ + GL Sbjct: 64 EGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGL 101 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/24 (62%), Positives = 17/24 (70%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P TS EFALA+VE L GKE Q+ Sbjct: 158 PGTSFEFALAIVEALNGKEVAAQV 181
>PARK7_MOUSE (Q99LX0) Protein DJ-1| Length = 189 Score = 55.1 bits (131), Expect = 2e-07 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIMYGVKI-XXXXXXXXXX 276 K+ L+ + G E +E IP+D++RRAG VTVA V+ V I Sbjct: 4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKT 63 Query: 277 XXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGL 390 YD++VLPGG GA NL ++ IL++ + GL Sbjct: 64 QGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGL 101 Score = 32.3 bits (72), Expect = 1.2 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P TS EFALA+VE L GK+ Q+ Sbjct: 158 PGTSFEFALAIVEALVGKDMANQV 181
>THIJ_ECOLI (Q46948) Protein thiJ| Length = 196 Score = 46.6 bits (109), Expect(2) = 7e-07 Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Frame = +1 Query: 109 LLPIVAGTEPIEASIPIDILRRAGADVTVAS-AGDA-LLVEIMYGVKIXXXXXXXXXXXX 282 L+ + G+E EA ID+L R G VT AS A D L + GVK+ Sbjct: 6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADG 65 Query: 283 SYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHKAT 462 YD+IVLPGG+ GA L +++ G + + T Sbjct: 66 EYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMT 125 Query: 463 GHPWFVGEVPS 495 G P ++P+ Sbjct: 126 GFPTLKDKIPA 136 Score = 26.2 bits (56), Expect(2) = 7e-07 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P T+++F L +++ L G+EK ++ Sbjct: 158 PGTAIDFGLKIIDLLVGREKAHEV 181
>THIJ_SALTY (P55880) Protein thiJ| Length = 196 Score = 47.0 bits (110), Expect(2) = 7e-07 Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 2/133 (1%) Frame = +1 Query: 103 KVLLPIVAGTEPIEASIPIDILRRAGADVTVAS-AGDA-LLVEIMYGVKIXXXXXXXXXX 276 + L+ + G+E EA ID+L R G VT AS A D L + GVK+ Sbjct: 4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVA 63 Query: 277 XXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGLLDGHK 456 YD+IVLPGG+ GA L +++ G + + Sbjct: 64 DGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGN 123 Query: 457 ATGHPWFVGEVPS 495 TG P ++P+ Sbjct: 124 MTGFPALKDKIPA 136 Score = 25.8 bits (55), Expect(2) = 7e-07 Identities = 8/24 (33%), Positives = 17/24 (70%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P T+++F L +++ L G+EK ++ Sbjct: 158 PGTAIDFGLKIIDLLAGREKAHEV 181
>YDB3_SCHPO (Q10356) Hypothetical protein C22E12.03c in chromosome I| Length = 191 Score = 39.3 bits (90), Expect(2) = 3e-04 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 7/140 (5%) Frame = +1 Query: 103 KVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDAL--LVEI-----MYGVKIXXXXX 261 KV L + GT+ IE S P I +RA + G+ LV++ MY + Sbjct: 3 KVCLFVADGTDEIEFSAPWGIFKRAEIPIDSVYVGENKDRLVKMSRDVEMYANRSYKEIP 62 Query: 262 XXXXXXXSYDLIVLPGGVPGAANLGGCATLEGILRKHVEKGGLYXXXXXXXXXXXXSWGL 441 YD+ ++PGG GA L ++ ++++ +K + + G Sbjct: 63 SADDFAKQYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTLTAKTSG- 121 Query: 442 LDGHKATGHPWFVGEVPS*G 501 L + TGHP G++ G Sbjct: 122 LPNKQITGHPSVRGQLEEGG 141 Score = 24.3 bits (51), Expect(2) = 3e-04 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 558 PATSMEFALALVEQLYGKEKVEQI 629 P T+M F L L+EQ+ K+K + Sbjct: 161 PGTAMLFGLKLLEQVASKDKYNAV 184
>VE2_HPV55 (Q80937) Regulatory protein E2| Length = 378 Score = 32.7 bits (73), Expect = 0.91 Identities = 24/83 (28%), Positives = 35/83 (42%) Frame = -1 Query: 586 ASANSIDVAGPVPVTALPSTTTFASTAGHLRRELLPRTRDDP*PCVRRVGPRTPTPAAVQ 407 ++ + +AGP T+ +TTT A + L R DP PC R GP T T A Sbjct: 201 STVQDVSIAGPASHTSSSTTTTLAQASPALPT-CTSEERVDPPPCKRPRGPTTNTNNARD 259 Query: 406 RIWRRRVLPSQRASSVCPPTSHN 338 + R ++ P S+N Sbjct: 260 TVSVRHSDSVDSTNNNIYPNSYN 282
>Y1560_STAES (Q8CRV8) Hypothetical protein SE_1560| Length = 172 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIM--YGVKIXXXXXXXXX 273 KKV + + E IE + P + L AG + V GD E++ +G K+ Sbjct: 3 KKVAIILADEFEDIELTSPKEALENAGFETEVI--GDTANHEVVGKHGEKVTVDVSIADA 60 Query: 274 XXXSYDLIVLPGG 312 +YD +++PGG Sbjct: 61 KPENYDALLIPGG 73
>Y1413_STAEQ (Q5HN59) Hypothetical protein SERP1413| Length = 172 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIM--YGVKIXXXXXXXXX 273 KKV + + E IE + P + L AG + V GD E++ +G K+ Sbjct: 3 KKVAIILADEFEDIELTSPKEALENAGFETEVI--GDTANHEVVGKHGEKVTVDVSIADA 60 Query: 274 XXXSYDLIVLPGG 312 +YD +++PGG Sbjct: 61 KPENYDALLIPGG 73
>P100_HCMVA (P08318) Large structural phosphoprotein (pp150) (150 kDa matrix| phosphoprotein) (Basic phosphoprotein) (BPP) (Tegument protein UL32) Length = 1048 Score = 31.6 bits (70), Expect = 2.0 Identities = 18/79 (22%), Positives = 31/79 (39%) Frame = -3 Query: 353 SNVAQPPRFAAPGTPPGRTMRXXXXXXXXXXXXXANILTPYMISTRRASPAEATVTSAPA 174 ++V PP + P R + + ++T AS TVTS P Sbjct: 740 NDVISPPSQTPEQSTPSRIRKAKLSSPMTTTSTSQKPVLGKRVATPHASARAQTVTSTPV 799 Query: 173 RRRMSMGMDASIGSVPATI 117 + R+ + + +VPAT+ Sbjct: 800 QGRLEKQVSGTPSTVPATL 818
>Y1625_STAS1 (Q49WT1) Hypothetical protein SSP1625| Length = 172 Score = 30.8 bits (68), Expect = 3.5 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%) Frame = +1 Query: 100 KKVLLPIVAGTEPIEASIPIDILRRAGADVTVASAGDALLVEIM--YGVKIXXXXXXXXX 273 KKV + + E IE + P + L AG + V GD E++ +G K+ Sbjct: 3 KKVAIILADEFEDIELTSPKEALENAGFETEVI--GDTEKHELVGKHGEKVTVDVSIADA 60 Query: 274 XXXSYDLIVLPGG 312 +YD +++PGG Sbjct: 61 KPENYDALLIPGG 73
>PKHA6_MOUSE (Q7TQG1) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1173 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = -3 Query: 230 MISTRRASPAEATVTSAPARRRMSMGMDASIGSVPATIGSSTFLGEGDVAMAM 72 ++ R SPAE +T + RR + G+ + S S+ F GEG V M++ Sbjct: 894 IVPPRTKSPAEEELTPSAVVRRTTNGLTNGLSSRQERPKSAVFSGEGKVKMSV 946
>POLG_HCVJ2 (P27959) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70)] (Fragment) Length = 512 Score = 29.6 bits (65), Expect = 7.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = +1 Query: 4 RHEEEKHCNCSLPVHHLNSRKLTMAMATSPSPKKVLL 114 RHE + CNCS+ HL+ ++ M + SP L+ Sbjct: 296 RHETLQDCNCSIYPGHLSGHRMAWDMMMNWSPTTALV 332 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,259,128 Number of Sequences: 219361 Number of extensions: 1247754 Number of successful extensions: 5015 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 4762 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5003 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
