Clone Information

BLAST Search Result

Clone Name	bah63a23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK100651.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	468	e-129
2	ref\|XM_470005.1\| Oryza sativa (japonica cultivar-group), mRNA	460	e-126
3	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	256	6e-65
4	gb\|AC135563.5\| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom...	256	6e-65
5	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	256	6e-65
6	gb\|AC133218.3\| Oryza sativa (japonica cultivar-group) chromosome...	98	4e-17
7	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	98	4e-17
8	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	98	4e-17
9	ref\|NM_111267.3\| Arabidopsis thaliana ATP binding / protein bind...	72	2e-09
10	gb\|AC011698.6\|ATAC011698 Arabidopsis thaliana chromosome III BAC...	72	2e-09
11	gb\|BT010388.1\| Arabidopsis thaliana At3g03960 mRNA, complete cds	72	2e-09
12	gb\|AF370490.1\|AF370490 Arabidopsis thaliana putative T-complex p...	72	2e-09
13	emb\|BX823289.1\|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Co...	72	2e-09
14	dbj\|AP004491.1\| Lotus japonicus genomic DNA, chromosome 1, clone...	56	1e-04
15	ref\|XM_385795.1\| Gibberella zeae PH-1 chromosome 3 conserved hyp...	46	0.12
16	ref\|NM_112896.2\| Arabidopsis thaliana ATTCP-1; ATP binding / pro...	40	7.1
17	ref\|XM_525933.1\| PREDICTED: Pan troglodytes similar to Polyadeny...	40	7.1
18	gb\|AC120558.12\| Mus musculus chromosome 18, clone RP24-494K12, c...	40	7.1
19	gb\|AC132098.4\| Mus musculus BAC clone RP24-401I1 from chromosome...	40	7.1
20	gb\|AC100751.6\| Mus musculus chromosome 18, clone RP23-249P18, co...	40	7.1
21	gb\|BC033032.1\| Homo sapiens cDNA clone IMAGE:5268495	40	7.1
22	gb\|AC087412.14\| Oryza sativa chromosome 3 BAC OSJNBb0070O09 geno...	40	7.1
23	ref\|XM_783013.1\| PREDICTED: Strongylocentrotus purpuratus simila...	40	7.1
24	gb\|BC068242.1\| Homo sapiens poly(A) binding protein, cytoplasmic...	40	7.1
25	ref\|NG_001267.1\| Homo sapiens poly(A) binding protein, cytoplasm...	40	7.1
26	tpg\|BK005598.1\| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, compl...	40	7.1
27	gb\|AF132027.1\|AF132027 Homo sapiens poly(A)-binding protein-rela...	40	7.1
28	emb\|BX823612.1\|CNS0A4WG Arabidopsis thaliana Full-length cDNA Co...	40	7.1
29	dbj\|AP006878.1\| Thermococcus kodakarensis KOD1 DNA, complete genome	40	7.1
30	gb\|AC093113.4\| Homo sapiens BAC clone RP11-789A18 from 2, comple...	40	7.1
31	gb\|AC154524.2\| Mus musculus BAC clone RP24-68D23 from chromosome...	40	7.1
32	gb\|AC007963.7\|AC007963 Homo sapiens chromosome 17, clone CTD-201...	40	7.1
33	dbj\|AP000383.1\| Arabidopsis thaliana genomic DNA, chromosome 3, ...	40	7.1
34	dbj\|D11351.1\|ATHTCP1H A. thaliana mRNA for t-complex polypeptide...	40	7.1
35	dbj\|D11352.1\| Arabidopsis thaliana DNA for CCT alpha/TCP-1, comp...	40	7.1
36	gb\|AY389884.1\| Uncultured archaeon clone NBFF33 putative thermos...	40	7.1
37	gb\|BT002052.1\| Arabidopsis thaliana t-complex polypeptide 1 homo...	40	7.1
38	emb\|BX908390.7\| Zebrafish DNA sequence from clone CH211-113C15 i...	40	7.1
39	emb\|AL929264.4\| Zebrafish DNA sequence from clone CH211-59C24 in...	40	7.1
40	gb\|BT021103.1\| Arabidopsis thaliana At3g20050 gene, complete cds	40	7.1
41	gb\|U60801.1\|HSU60801 Human poly(A)-binding protein (PABP) proces...	40	7.1
42	dbj\|D29672.1\|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock prot...	40	7.1
43	gb\|AC151409.2\| Mus musculus BAC clone RP24-541K8 from 18, comple...	40	7.1
44	dbj\|AB001083.1\| Thermococcus sp. DNA for chaperonin beta subunit...	40	7.1
45	dbj\|AB001081.2\| Thermococcus sp. DNA for chaperonin beta subunit...	40	7.1

>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full
           insert sequence
          Length = 2070

 Score =  468 bits (236), Expect = e-129
 Identities = 434/500 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   gatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtg 64
           |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 307 gatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggta 366

                                                                       
Query: 65  ctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttc 124
           || |||| ||| || || |||||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 367 ctagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatctttt 426

                                                                       
Query: 125 gcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgag 184
           || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||||||||
Sbjct: 427 gctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgag 486

                                                                       
Query: 185 atcatcattgggtataccaaggccattaataagacgcttgagattttggaggatctagtt 244
           ||||||||||| || ||||||||||||||||||||  ||||||| ||||| ||||| || 
Sbjct: 487 atcatcattggctacaccaaggccattaataagactgttgagatcttggaagatcttgtg 546

                                                                       
Query: 245 gagaaaggctcggaaaatatggatgtaaggaacacggaggaggtcatgttgaggatgaaa 304
           |||||||| || ||||| |||||||| ||||||| |||||||||  |||||  ||||| |
Sbjct: 547 gagaaaggttcagaaaacatggatgtgaggaacaaggaggaggttgtgttgctgatgaga 606

                                                                       
Query: 305 tctgctgttgcaagcaagcaatttggccaggaggatgtgctgtgtccacttgtcgcggat 364
           ||||| ||||| ||||||||||| || ||||||||| |  |||| || ||||| || |||
Sbjct: 607 tctgcagttgcgagcaagcaattcggtcaggaggatatattgtgccctcttgtggctgat 666

                                                                       
Query: 365 gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 424
           |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| 
Sbjct: 667 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 726

                                                                       
Query: 425 gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 484
           || || ||  ||||||| ||  ||||||| |||||||||||||| || ||||||||||||
Sbjct: 727 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 786

                               
Query: 485 aatgacgctgttgggagcat 504
           ||||||||||||||||||||
Sbjct: 787 aatgacgctgttgggagcat 806

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>ref|XM_470005.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2070

 Score =  460 bits (232), Expect = e-126
 Identities = 433/500 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   gatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtg 64
           |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 307 gatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggta 366

                                                                       
Query: 65  ctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttc 124
           || |||| ||| || || |||||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 367 ctagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatctttt 426

                                                                       
Query: 125 gcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgag 184
           || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||||||||
Sbjct: 427 gctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgag 486

                                                                       
Query: 185 atcatcattgggtataccaaggccattaataagacgcttgagattttggaggatctagtt 244
           ||||||||||| || ||||||||||||||||||||  ||||||| ||||| ||||| || 
Sbjct: 487 atcatcattggctacaccaaggccattaataagactgttgagatcttggaagatcttgtg 546

                                                                       
Query: 245 gagaaaggctcggaaaatatggatgtaaggaacacggaggaggtcatgttgaggatgaaa 304
           |||||||| || || || |||||||| ||||||| |||||||||  |||||  ||||| |
Sbjct: 547 gagaaaggttcagagaacatggatgtgaggaacaaggaggaggttgtgttgctgatgaga 606

                                                                       
Query: 305 tctgctgttgcaagcaagcaatttggccaggaggatgtgctgtgtccacttgtcgcggat 364
           ||||| ||||| ||||||||||| || ||||||||| |  |||| || ||||| || |||
Sbjct: 607 tctgcagttgcgagcaagcaattcggtcaggaggatatattgtgccctcttgtggctgat 666

                                                                       
Query: 365 gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 424
           |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| 
Sbjct: 667 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 726

                                                                       
Query: 425 gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 484
           || || ||  ||||||| ||  ||||||| |||||||||||||| || ||||||||||||
Sbjct: 727 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 786

                               
Query: 485 aatgacgctgttgggagcat 504
           ||||||||||||||||||||
Sbjct: 787 aatgacgctgttgggagcat 806

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                            
Query: 5        gatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtg 64
                |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 33289701 gatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggta 33289760

                                                                            
Query: 65       ctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttc 124
                || |||| ||| || || |||||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 33289761 ctagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatctttt 33289820

                                                                            
Query: 125      gcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgag 184
                || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||||||||
Sbjct: 33289821 gctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgag 33289880

                                                 
Query: 185      atcatcattgggtataccaaggccattaataag 217
                ||||||||||| || ||||||||||||||||||
Sbjct: 33289881 atcatcattggctacaccaaggccattaataag 33289913



 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                            
Query: 365      gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 424
                |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| 
Sbjct: 33290243 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 33290302

                                                                            
Query: 425      gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 484
                || || ||  ||||||| ||  ||||||| |||||||||||||| || ||||||||||||
Sbjct: 33290303 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 33290362

                                    
Query: 485      aatgacgctgttgggagcat 504
                ||||||||||||||||||||
Sbjct: 33290363 aatgacgctgttgggagcat 33290382



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                            
Query: 222      ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 281
                ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 33290018 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33290077

                                                                           
Query: 282      aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 340
                |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 33290078 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33290136



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 301      gaaatctgctgttgcaagca 320
                ||||||||||||||||||||
Sbjct: 26888450 gaaatctgctgttgcaagca 26888431

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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                         
Query: 5     gatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtg 64
             |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 46217 gatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggta 46276

                                                                         
Query: 65    ctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttc 124
             || |||| ||| || || |||||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 46277 ctagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatctttt 46336

                                                                         
Query: 125   gcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgag 184
             || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||||||||
Sbjct: 46337 gctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgag 46396

                                              
Query: 185   atcatcattgggtataccaaggccattaataag 217
             ||||||||||| || ||||||||||||||||||
Sbjct: 46397 atcatcattggctacaccaaggccattaataag 46429



 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                         
Query: 365   gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 424
             |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| 
Sbjct: 46759 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 46818

                                                                         
Query: 425   gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 484
             || || ||  ||||||| ||  ||||||| |||||||||||||| || ||||||||||||
Sbjct: 46819 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 46878

                                 
Query: 485   aatgacgctgttgggagcat 504
             ||||||||||||||||||||
Sbjct: 46879 aatgacgctgttgggagcat 46898



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                         
Query: 222   ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 281
             ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 46534 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 46593

                                                                        
Query: 282   aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 340
             |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 46594 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 46652

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  256 bits (129), Expect = 6e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                            
Query: 5        gatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtg 64
                |||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||| 
Sbjct: 33380211 gatgctgcaacaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggta 33380270

                                                                            
Query: 65       ctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatctttc 124
                || |||| ||| || || |||||||| ||||| |||||||||||||||||||||||||| 
Sbjct: 33380271 ctagctggcagggctcagcaggaggaaatcggtgatggagctaacctcaccatatctttt 33380330

                                                                            
Query: 125      gcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgag 184
                || ||||||||||| |||||||| |||||||| |||||||||||  ||||||||||||||
Sbjct: 33380331 gctggtgaactgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgag 33380390

                                                 
Query: 185      atcatcattgggtataccaaggccattaataag 217
                ||||||||||| || ||||||||||||||||||
Sbjct: 33380391 atcatcattggctacaccaaggccattaataag 33380423



 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Plus

                                                                            
Query: 365      gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 424
                |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| 
Sbjct: 33380753 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 33380812

                                                                            
Query: 425      gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 484
                || || ||  ||||||| ||  ||||||| |||||||||||||| || ||||||||||||
Sbjct: 33380813 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 33380872

                                    
Query: 485      aatgacgctgttgggagcat 504
                ||||||||||||||||||||
Sbjct: 33380873 aatgacgctgttgggagcat 33380892



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                            
Query: 222      ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 281
                ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| ||
Sbjct: 33380528 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33380587

                                                                           
Query: 282      aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 340
                |||||||  |||||  ||||| |||||| ||||| ||||||||||| || |||||||||
Sbjct: 33380588 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33380646



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 301      gaaatctgctgttgcaagca 320
                ||||||||||||||||||||
Sbjct: 26979773 gaaatctgctgttgcaagca 26979754

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>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0549G05, complete sequence
          Length = 147182

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                      
Query: 7     tgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 63
             |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 63717 tgctgcaacaattgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 63773



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 145
             ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 63788 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 63847

                                                       
Query: 146   gctgaggagctcatcaggatgggactgcatccaagtgagatc 187
             ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 63848 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 63889



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 474   tggttctgaaaaatgacgctgttgggagcat 504
             ||||||||||||||| |||||||||||||||
Sbjct: 64357 tggttctgaaaaatggcgctgttgggagcat 64387

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 7        tgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 63
                |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 20942105 tgctgcaacaattgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 20942161



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 87       aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 145
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 20942176 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 20942235

                                                          
Query: 146      gctgaggagctcatcaggatgggactgcatccaagtgagatc 187
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 20942236 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 20942277



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 474      tggttctgaaaaatgacgctgttgggagcat 504
                ||||||||||||||| |||||||||||||||
Sbjct: 20942745 tggttctgaaaaatggcgctgttgggagcat 20942775

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 7        tgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 63
                |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21252340 tgctgcaacaattgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 21252396



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 87/102 (85%), Gaps = 1/102 (0%)
 Strand = Plus / Plus

                                                                            
Query: 87       aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 145
                ||||||| || |||||||||||||||||||||||||| || | | |  ||||| ||||||
Sbjct: 21252411 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 21252470

                                                          
Query: 146      gctgaggagctcatcaggatgggactgcatccaagtgagatc 187
                ||| |||||||  ||||||||||  |||||||||||| ||||
Sbjct: 21252471 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 21252512



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                               
Query: 474      tggttctgaaaaatgacgctgttgggagcat 504
                ||||||||||||||| |||||||||||||||
Sbjct: 21252980 tggttctgaaaaatggcgctgttgggagcat 21253010

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>ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein binding AT3G03960 mRNA,
           complete cds
          Length = 2054

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 150/188 (79%)
 Strand = Plus / Plus

                                                                       
Query: 2   aatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctg 61
           ||||| ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||
Sbjct: 344 aatgacgctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctg 403

                                                                       
Query: 62  gtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatct 121
           ||  | ||||| |  || || || || || ||||| ||||||||||| || || || || 
Sbjct: 404 gttttagctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcc 463

                                                                       
Query: 122 ttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagt 181
           || || |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||
Sbjct: 464 tttgctggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagt 523

                   
Query: 182 gagatcat 189
           ||||||||
Sbjct: 524 gagatcat 531



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 437 ggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaaaatgacgctgtt 496
           ||||| ||| ||||||||||||   |||||||||| |||||  |||||| ||| ||||||
Sbjct: 779 ggaggaggcttgcacaattcttgcatagtccgtggtatggtcttgaaaagtgatgctgtt 838

                   
Query: 497 gggagcat 504
           || |||||
Sbjct: 839 ggtagcat 846



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 308 gctgttgcaagcaagcaatttggccaggagga 339
           ||||||||||||||||| ||||| || |||||
Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681

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>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence,
             complete sequence
          Length = 63654

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 150/188 (79%)
 Strand = Plus / Plus

                                                                         
Query: 2     aatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctg 61
             ||||| ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||
Sbjct: 21483 aatgacgctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctg 21542

                                                                         
Query: 62    gtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatct 121
             ||  | ||||| |  || || || || || ||||| ||||||||||| || || || || 
Sbjct: 21543 gttttagctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcc 21602

                                                                         
Query: 122   ttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagt 181
             || || |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||
Sbjct: 21603 tttgctggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagt 21662

                     
Query: 182   gagatcat 189
             ||||||||
Sbjct: 21663 gagatcat 21670



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 437   ggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaaaatgacgctgtt 496
             ||||| ||| ||||||||||||   |||||||||| |||||  |||||| ||| ||||||
Sbjct: 22116 ggaggaggcttgcacaattcttgcatagtccgtggtatggtcttgaaaagtgatgctgtt 22175

                     
Query: 497   gggagcat 504
             || |||||
Sbjct: 22176 ggtagcat 22183



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 308   gctgttgcaagcaagcaatttggccaggagga 339
             ||||||||||||||||| ||||| || |||||
Sbjct: 21877 gctgttgcaagcaagcagtttgggcaagagga 21908

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>gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds
          Length = 1650

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 150/188 (79%)
 Strand = Plus / Plus

                                                                       
Query: 2   aatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctg 61
           ||||| ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||
Sbjct: 199 aatgacgctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctg 258

                                                                       
Query: 62  gtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatct 121
           ||  | ||||| |  || || || || || ||||| ||||||||||| || || || || 
Sbjct: 259 gttttagctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcc 318

                                                                       
Query: 122 ttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagt 181
           || || |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||
Sbjct: 319 tttgctggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagt 378

                   
Query: 182 gagatcat 189
           ||||||||
Sbjct: 379 gagatcat 386



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 437 ggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaaaatgacgctgtt 496
           ||||| ||| ||||||||||||   |||||||||| |||||  |||||| ||| ||||||
Sbjct: 634 ggaggaggcttgcacaattcttgcatagtccgtggtatggtcttgaaaagtgatgctgtt 693

                   
Query: 497 gggagcat 504
           || |||||
Sbjct: 694 ggtagcat 701



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 308 gctgttgcaagcaagcaatttggccaggagga 339
           ||||||||||||||||| ||||| || |||||
Sbjct: 505 gctgttgcaagcaagcagtttgggcaagagga 536

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>gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex protein 1, theta subunit;
           TCP-1-Theta (T11I18.7) mRNA, complete cds
          Length = 1932

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 150/188 (79%)
 Strand = Plus / Plus

                                                                       
Query: 2   aatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctg 61
           ||||| ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||
Sbjct: 339 aatgacgctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctg 398

                                                                       
Query: 62  gtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatct 121
           ||  | ||||| |  || || || || || ||||| ||||||||||| || || || || 
Sbjct: 399 gttttagctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcc 458

                                                                       
Query: 122 ttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagt 181
           || || |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||
Sbjct: 459 tttgctggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagt 518

                   
Query: 182 gagatcat 189
           ||||||||
Sbjct: 519 gagatcat 526



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 437 ggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaaaatgacgctgtt 496
           ||||| ||| ||||||||||||   |||||||||| |||||  |||||| ||| ||||||
Sbjct: 774 ggaggaggcttgcacaattcttgcatagtccgtggtatggtcttgaaaagtgatgctgtt 833

                   
Query: 497 gggagcat 504
           || |||||
Sbjct: 834 ggtagcat 841



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 308 gctgttgcaagcaagcaatttggccaggagga 339
           ||||||||||||||||| ||||| || |||||
Sbjct: 645 gctgttgcaagcaagcagtttgggcaagagga 676

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>emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS1ZF10 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2049

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 150/188 (79%)
 Strand = Plus / Plus

                                                                       
Query: 2   aatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctg 61
           ||||| ||||| || || ||||| ||||| ||| | |||||||| |||||||| || |||
Sbjct: 344 aatgacgctgctactatagtgaatgagctcgagattcagcacccggctgctaaacttctg 403

                                                                       
Query: 62  gtgctcgctgccagagcccaacaggaggagatcggggatggagctaacctcaccatatct 121
           ||  | ||||| |  || || || || || ||||| ||||||||||| || || || || 
Sbjct: 404 gttttagctgctaaggctcagcaagaagaaatcggagatggagctaatctgacaatctcc 463

                                                                       
Query: 122 ttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatgggactgcatccaagt 181
           || || |||||||| ||  | || ||||||||||| |||||||||||||| ||||| |||
Sbjct: 464 tttgctggtgaacttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagt 523

                   
Query: 182 gagatcat 189
           ||||||||
Sbjct: 524 gagatcat 531



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 308 gctgttgcaagcaagcaatttggccaggagga 339
           ||||||||||||||||| ||||| || |||||
Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681

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>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023,
             complete sequence
          Length = 91039

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 371   atccaagtttgccccaaaaatccggcaaactttaatgttgacaatgtt 418
             |||||||| ||||| ||||| || |||||||||||||| |||||||||
Sbjct: 76651 atccaagtgtgcccaaaaaaccctgcaaactttaatgtggacaatgtt 76604



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 146   gctgaggagctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaa 204
             ||||||||||| |||||||||||  |||| || || |||||||||| ||| ||||||||
Sbjct: 77431 gctgaggagcttatcaggatgggtttgcacccgagcgagatcatcagtggatataccaa 77373

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>ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein
            (FG05619.1) partial mRNA
          Length = 5052

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 134  ctgctcgagaaggctgaggagctcatc 160
            ||||||||||||||||| |||||||||
Sbjct: 3939 ctgctcgagaaggctgatgagctcatc 3913

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>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding
           AT3G20050 (ATTCP-1) mRNA, complete cds
          Length = 2063

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           |||||| |||||||||||||||||
Sbjct: 340 gaggtcgagcaccctgctgctaag 363

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>ref|XM_525933.1| PREDICTED: Pan troglodytes similar to Polyadenylate-binding protein
           1 (Poly(A)-binding protein 1) (PABP 1) (LOC470552), mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 agcaatttggccaggaggat 340
           ||||||||||||||||||||
Sbjct: 729 agcaatttggccaggaggat 710

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>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence
          Length = 216435

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ggccaggaggatgtgctgtg 348
              ||||||||||||||||||||
Sbjct: 216156 ggccaggaggatgtgctgtg 216137

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>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence
          Length = 154520

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ggccaggaggatgtgctgtg 348
              ||||||||||||||||||||
Sbjct: 123129 ggccaggaggatgtgctgtg 123110

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>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence
          Length = 253910

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   agctcatcaggatgggactg 172
             ||||||||||||||||||||
Sbjct: 86843 agctcatcaggatgggactg 86824

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>gb|BC033032.1| Homo sapiens cDNA clone IMAGE:5268495
          Length = 2657

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 1278 agcaatttggccaggaggat 1259

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>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete
             sequence
          Length = 149303

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 301   gaaatctgctgttgcaagca 320
             ||||||||||||||||||||
Sbjct: 67450 gaaatctgctgttgcaagca 67431

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>ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin
           containing TCP1, subunit 8 (theta) (LOC583086), partial
           mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           ||||| ||||||||||||||||||
Sbjct: 187 gaggttcagcaccctgctgctaag 210

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>gb|BC068242.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2, mRNA
            (cDNA clone MGC:51329 IMAGE:5267930), complete cds
          Length = 3313

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 1027 agcaatttggccaggaggat 1008

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>ref|NG_001267.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2
            (PABPCP2) on chromosome 14
          Length = 3258

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 1815 agcaatttggccaggaggat 1796

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>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively
             spliced
          Length = 227735

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ctgcatccaagtgagatcat 189
             ||||||||||||||||||||
Sbjct: 38581 ctgcatccaagtgagatcat 38600

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>gb|AF132027.1|AF132027 Homo sapiens poly(A)-binding protein-related mRNA
          Length = 1909

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 1294 agcaatttggccaggaggat 1275

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>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZH05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1961

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           |||||| |||||||||||||||||
Sbjct: 324 gaggtcgagcaccctgctgctaag 347

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>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      tccagcaccctgctgctaag 55
               ||||||||||||||||||||
Sbjct: 2085050 tccagcaccctgctgctaag 2085069

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>gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, complete sequence
          Length = 175556

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 8910 agcaatttggccaggaggat 8891

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>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete sequence
          Length = 252926

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    ggatgtgctgtgtccacttg 356
              ||||||||||||||||||||
Sbjct: 153846 ggatgtgctgtgtccacttg 153827

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>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence
          Length = 133488

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ctgcatccaagtgagatcat 189
             ||||||||||||||||||||
Sbjct: 88636 ctgcatccaagtgagatcat 88655

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>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21
          Length = 83253

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 32    gaggtccagcaccctgctgctaag 55
             |||||| |||||||||||||||||
Sbjct: 21891 gaggtcgagcaccctgctgctaag 21868

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>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete
           cds
          Length = 2024

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           |||||| |||||||||||||||||
Sbjct: 339 gaggtcgagcaccctgctgctaag 362

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>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds
          Length = 6533

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   gaggtccagcaccctgctgctaag 55
            |||||| |||||||||||||||||
Sbjct: 2285 gaggtcgagcaccctgctgctaag 2308

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>gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermosome subunit gene,
           partial cds
          Length = 700

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 32  gaggtccagcaccctgctgctaagctcctggt 63
           ||||| ||||||||||| || |||||||||||
Sbjct: 259 gaggttcagcaccctgccgcgaagctcctggt 290

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>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050)
           mRNA, complete cds
          Length = 2022

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           |||||| |||||||||||||||||
Sbjct: 338 gaggtcgagcaccctgctgctaag 361

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>emb|BX908390.7| Zebrafish DNA sequence from clone CH211-113C15 in linkage group 18,
             complete sequence
          Length = 31676

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ttgcaagcaagcaatttggc 331
             ||||||||||||||||||||
Sbjct: 27148 ttgcaagcaagcaatttggc 27129

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>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18,
             complete sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   ttgcaagcaagcaatttggc 331
             ||||||||||||||||||||
Sbjct: 99278 ttgcaagcaagcaatttggc 99297

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>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds
          Length = 1718

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 32  gaggtccagcaccctgctgctaag 55
           |||||| |||||||||||||||||
Sbjct: 256 gaggtcgagcaccctgctgctaag 279

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>gb|U60801.1|HSU60801 Human poly(A)-binding protein (PABP) processed pseudogene2, complete
            cds
          Length = 3258

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  agcaatttggccaggaggat 340
            ||||||||||||||||||||
Sbjct: 1815 agcaatttggccaggaggat 1796

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>dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock protein, complete cds
          Length = 1838

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  tccagcaccctgctgctaag 55
           ||||||||||||||||||||
Sbjct: 319 tccagcaccctgctgctaag 338

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>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence
          Length = 179265

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ggccaggaggatgtgctgtg 348
             ||||||||||||||||||||
Sbjct: 18324 ggccaggaggatgtgctgtg 18305

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>dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 2030

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  tccagcaccctgctgctaag 55
           ||||||||||||||||||||
Sbjct: 428 tccagcaccctgctgctaag 447

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>dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit, complete cds
          Length = 1980

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  tccagcaccctgctgctaag 55
           ||||||||||||||||||||
Sbjct: 368 tccagcaccctgctgctaag 387


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,074,717
Number of Sequences: 3902068
Number of extensions: 4074717
Number of successful extensions: 74119
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73829
Number of HSP's gapped (non-prelim): 290
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result