ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62l23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 116 4e-26
2DFRA_HORVU (P51106) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 108 1e-23
3DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 106 4e-23
4DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 106 6e-23
5DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 100 5e-21
6DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 100 5e-21
7DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 98 2e-20
8DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 96 6e-20
9DFRA_LYCES (P51107) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 94 3e-19
10DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 91 3e-18
11BAN_ARATH (Q9SEV0) Leucoanthocyanidin reductase (EC 1.3.1.77) (L... 86 1e-16
12DFRA_MEDSA (P51109) Dihydroflavonol-4-reductase (EC 1.1.1.219) (... 69 1e-11
13YGP7_YEAST (P53111) Hypothetical protein YGL157W 50 6e-06
14GRE2_YEAST (Q12068) NADPH-dependent methylglyoxal reductase GRE2... 49 1e-05
15FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2... 47 3e-05
16RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC ... 45 1e-04
17YGD9_YEAST (P53183) Hypothetical protein YGL039W 44 3e-04
18RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC ... 44 5e-04
19Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF 41 0.003
20RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC ... 39 0.011
21GALE_VIBCH (Q56623) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 38 0.020
22DFRA_SYNY3 (P73212) Putative dihydroflavonol-4-reductase (EC 1.1... 37 0.044
23IPYR_COREF (Q8FMF8) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyro... 34 0.28
24IF2_SYNY3 (P72689) Translation initiation factor IF-2 32 1.1
25Y2109_PHOLL (Q7N550) UPF0082 protein plu2109 32 1.4
26FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-... 32 1.4
27KHSE_ENTFA (Q831T0) Homoserine kinase (EC 2.7.1.39) (HSK) (HK) 31 2.4
28Y2494_ERWCT (Q6D499) UPF0082 protein ECA2494 30 5.3
29SCRB2_MOUSE (O35114) Lysosome membrane protein 2 (Lysosome membr... 30 6.9
30C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial... 29 9.1
31RCSA_KLEAE (P05338) Colanic acid capsular biosynthesis activatio... 29 9.1
32BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 prot... 29 9.1

>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 337

 Score =  116 bits (291), Expect = 4e-26
 Identities = 68/183 (37%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
 Frame = +3

Query: 72  DEDCWSDVDYCRT---TENWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE CWSD+++CR    T   Y +SKTLAE  A+ YAK + +D +T+ P+LV+GP +  ++
Sbjct: 143 DESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSM 202

Query: 243 NASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G     S IR   FV + DL +A I ++E P+  GRYICSSH   + D
Sbjct: 203 PPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILD 262

Query: 417 VIDLLKSMYPAYKFANKIVHVDD---EPSFSSRKLEMLGWKIK-PLEETLRDSVESYKAA 584
           +  +L+  YP Y    +   VD+      FSS+KL  LG++ K  LE+    +V++ +A 
Sbjct: 263 LAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAK 322

Query: 585 AVL 593
            +L
Sbjct: 323 GLL 325



to top

>DFRA_HORVU (P51106) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 354

 Score =  108 bits (270), Expect = 1e-23
 Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 8/172 (4%)
 Frame = +3

Query: 72  DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           D+D WSD+DYCR  +   W Y +SK LAE  A +YA  +GLD +++ P+LV+GP L   +
Sbjct: 143 DQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGM 202

Query: 243 NASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G     S ++    V + DL DA+  ++E PE +GRYICSSH   +  
Sbjct: 203 PPSLVTALALITGNEAHYSILKQVQLVHLDDLCDAMTFLFEHPEANGRYICSSHDATIHG 262

Query: 417 VIDLLKSMYPAYKFANKIVHVDD--EP-SFSSRKLEMLGWKIKPLEETLRDS 563
           +  +L+  +P Y    K   VDD  +P  FSS+KL   G+  +   E + D+
Sbjct: 263 LARMLQDRFPEYDIPQKFAGVDDNLQPIHFSSKKLLDHGFSFRYTTEDMFDA 314



to top

>DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 364

 Score =  106 bits (265), Expect = 4e-23
 Identities = 64/183 (34%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 72  DEDCWSDVD--YCRTTENW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE  WSD+D  Y +    W Y +SKTLAE  A + AK + +D V++ P LV+GP + PT 
Sbjct: 144 DESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTF 203

Query: 243 NASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G     S I+   +V + DL +  I +YE PE  GRYICS     +  
Sbjct: 204 PPSLITALSLINGAESHYSIIKQGQYVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQ 263

Query: 417 VIDLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLGWKIK-PLEETLRDSVESYKAA 584
           +  ++K  +P Y    +   +D+E    SFSS+KL  +G+K K  LE+  + +++S K  
Sbjct: 264 LARMIKQKWPEYHVPTQFAGIDEELPTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEK 323

Query: 585 AVL 593
             L
Sbjct: 324 GFL 326



to top

>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 357

 Score =  106 bits (264), Expect = 6e-23
 Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 10/169 (5%)
 Frame = +3

Query: 72  DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE+ W+DVD+CR  +   W Y +SKTLAE  A  YA   GLD+VT+ P+LV+GP +  ++
Sbjct: 148 DEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASM 207

Query: 243 NASSSVIVDFLKGE--HEVKSKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G   H    K    + + DL DA I ++E P  +GRY+CSSH   +  
Sbjct: 208 PPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHG 267

Query: 417 VIDLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLG--WKIKPLEE 548
           +  +L+  YP Y    +   + D+     FSS+KL+ LG  ++ K LE+
Sbjct: 268 LAAMLRDRYPEYDVPQRFPGIQDDLQPVRFSSKKLQDLGFTFRYKTLED 316



to top

>DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 380

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 72  DEDCWSDVD--YCRTTENW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           D+  WSD+D  Y +    W Y  SK LAE  A + AK+  +D +++ P LV+GP + PT 
Sbjct: 153 DQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTF 212

Query: 243 NASSSVIVDFLKGE--HEVKSKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G   H    K   +V + DL +A I +YE P+  GR+ICSSH   + D
Sbjct: 213 PPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIYD 272

Query: 417 VIDLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLGWKIK-PLEETLRDSVESYKAA 584
           V  +++  +P Y    +   +D +    SFSS+KL  +G++ K  LE+  + ++++ +  
Sbjct: 273 VAKMVREKWPEYYVPTEFKGIDKDLPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQK 332

Query: 585 AVL 593
            +L
Sbjct: 333 QLL 335



to top

>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 366

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 60/183 (32%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 72  DEDCWSDVD--YCRTTENW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE  WSD+D  Y +    W Y +SKTLAE  A+D  K + +  +++ P+LV+GP +  T 
Sbjct: 144 DESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTF 203

Query: 243 NASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  + G     S I+   +V + DL +  I +YE P+  GRYICSSH   +  
Sbjct: 204 PPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQ 263

Query: 417 VIDLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLGWKIK-PLEETLRDSVESYKAA 584
           +  ++K  +P Y    K   +D+E    SFSS+KL   G++ K  LE+  + ++++ +  
Sbjct: 264 LAKIIKDKWPEYYIPTKFPGIDEELPIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREK 323

Query: 585 AVL 593
            +L
Sbjct: 324 GLL 326



to top

>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3
           protein)
          Length = 382

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 62/183 (33%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 72  DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE+ WSD+++  + +   W Y +SKTLAE  A+D+A+  GLD +++ P+LV+GP +  ++
Sbjct: 143 DENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSM 202

Query: 243 NASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHARKVSD 416
             S    +  +       S IR   +V + DL +A I +YE     GRYICSSH   +  
Sbjct: 203 PPSLITALSPITRNEAHYSIIRQGQYVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILT 262

Query: 417 VIDLLKSMYPAYKFANKIVHVDD---EPSFSSRKLEMLGWKIK-PLEETLRDSVESYKAA 584
           +   L+  YP Y   +    VD+      FSS+KL  +G+  K  LEE   +S+E+ +  
Sbjct: 263 ISKFLRPKYPEYNVPSTFEGVDENLKSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQK 322

Query: 585 AVL 593
             L
Sbjct: 323 GFL 325



to top

>DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 360

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
 Frame = +3

Query: 63  KPM-DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLL 230
           KP+ DE CWS +D+ R+ +   W Y +SK LAE  A+ YA  + L+ +++ P LV+GP +
Sbjct: 155 KPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFI 214

Query: 231 QPTVNASSSVIVDFLKG--EHEVKSKIRNFVDVRDLADALILVYETPEVSGRYICSSHAR 404
            P++  S    +  +     H    K   FV + DL  + I +YE P+ +GRYI S+ A 
Sbjct: 215 MPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMSHIFLYENPKANGRYIASACAA 274

Query: 405 KVSDVIDLLKSMYPAYKFANKIVHVDD---EPSFSSRKLEMLGWKIK-PLEETLRDSVES 572
            + D+  +L+  YP Y    K     +   +  FSS+KL  LG++ K  L++    +VES
Sbjct: 275 TIYDIAKMLREEYPEYNVPTKFKDYKEDMGQVQFSSKKLTDLGFEFKYGLKDMYTAAVES 334

Query: 573 YKAAAVL 593
            +A  +L
Sbjct: 335 CRAKGLL 341



to top

>DFRA_LYCES (P51107) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 379

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 56/181 (30%), Positives = 98/181 (54%), Gaps = 7/181 (3%)
 Frame = +3

Query: 72  DEDCWSDVD--YCRTTENW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTV 242
           DE  WSD+D  Y +    W Y +SK LAE  A + A+++ +D +++ P LV+GP +  T 
Sbjct: 155 DETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTF 214

Query: 243 NASSSVIVDFLKGEHEVKSKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSDVI 422
             S    +  +   + +  K   +V + DL +A I +YE P+  GR+ICSSH   + DV 
Sbjct: 215 PPSLITALSLITAHYGI-IKQGQYVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIYDVA 273

Query: 423 DLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLGWKIK-PLEETLRDSVESYKAAAV 590
            +++  +P Y    +   +D +    SFSS+KL  + ++ K  LE+  + ++E+ +   +
Sbjct: 274 KMVRQKWPEYYVPTEFKGIDKDLALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQKQL 333

Query: 591 L 593
           L
Sbjct: 334 L 334



to top

>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 446

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
 Frame = +3

Query: 63  KPM-DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLL 230
           KP+ DE   SD+D+  + +   W Y +SK LAE    + AK + +D +++ P LV+GP +
Sbjct: 151 KPVYDETDSSDMDFINSKKMTGWMYFVSKILAEKAGMEAAKENNIDFISIIPPLVVGPFI 210

Query: 231 QPTVNASSSVIVDFLKGEHEVKSKIRN--FVDVRDLADALILVYETPEVSGRYICSSHAR 404
            PT   S    +  + G     S I+   +V + DL +  I ++E P+  GRYICSSH  
Sbjct: 211 MPTFPPSLITALSPITGNEAHYSIIKQCQYVHLDDLCEGHIFLFEYPKAEGRYICSSHDA 270

Query: 405 KVSDVIDLLKSMYPAYKFANKIVHVDDE---PSFSSRKLEMLGWKIK-PLEETLRDSVES 572
            + D+  L+   +P Y   ++   +D +    SFSS+K+  +G+  K  LE+ +R ++++
Sbjct: 271 TIYDIAKLITENWPEYHIPDEFEGIDKDIPVVSFSSKKMIGMGFIFKYTLEDMVRGAIDT 330

Query: 573 YKAAAVL 593
            +   +L
Sbjct: 331 CREKGML 337



to top

>BAN_ARATH (Q9SEV0) Leucoanthocyanidin reductase (EC 1.3.1.77) (LAR) (Protein|
           BANYULS) (Anthocyanin spotted testa) (ast)
          Length = 340

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 15/207 (7%)
 Frame = +3

Query: 18  SSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLD 188
           SS AAV  N     G  M+E+ W+DV++    +  NW Y +SK LAE  A+++AK + ++
Sbjct: 131 SSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKIN 190

Query: 189 VVTVCPSLVIGPLLQPTVNASSSVIVDFLKG---------EHEVKSKIRNFVDVRDLADA 341
           +VTV P+L+ G  L     +S S+ + F+ G         E +  S   +FV V DLA A
Sbjct: 191 LVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSISFVHVDDLARA 250

Query: 342 LILVYETPEVSGRYICSSHARKVSDVIDLLKSMYPAYKFANKIVHVDDEP--SFSSRKLE 515
            + + E    SGRYIC ++   V ++ D L   YP Y   ++       P  + SS+KL 
Sbjct: 251 HLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNVLSEFEEGLSIPKLTLSSQKLI 310

Query: 516 MLGWKIK-PLEETLRDSVESYKAAAVL 593
             G++ +  + E     +E +++  ++
Sbjct: 311 NEGFRFEYGINEMYDQMIEYFESKGLI 337



to top

>DFRA_MEDSA (P51109) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase) (Fragment)
          Length = 217

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = +3

Query: 63  KPM-DEDCWSDVDYCRTTE--NW-YNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLL 230
           KP+ DE CWSDV++CR  +   W Y +SKTLAE +A+ +AK   +DV+T+ P LV+GP L
Sbjct: 122 KPLWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFL 181

Query: 231 QPTVNASSSVIVDFLKGEHEVKSKIR--NFVDVRDL 332
            PT+  S    +  + G     S I+   +V + DL
Sbjct: 182 IPTMPPSLITALSPITGNEAHYSIIKQGQYVHLDDL 217



to top

>YGP7_YEAST (P53111) Hypothetical protein YGL157W|
          Length = 347

 Score = 49.7 bits (117), Expect = 6e-06
 Identities = 50/199 (25%), Positives = 89/199 (44%), Gaps = 22/199 (11%)
 Frame = +3

Query: 33  VMTNPSWPEGKPMDEDCWSDVDYCRTTE-NWYNLSKTLAELQAFDYAKRSGLDVV----T 197
           V+T  SW      ++D W   D C+      Y  SK  AE  A+++ K +   V     T
Sbjct: 147 VITEESW------NKDTW---DSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLST 197

Query: 198 VCPSLVIGPL-----LQPTVNASSSVIVDFLKGE--HEVKSKIRNFVDVRDLADALILVY 356
           + P  V GP      L+  +N SS ++ + +  +   E  +    F+DVRD++ A ++  
Sbjct: 198 INPGFVFGPQMFADSLKHGINTSSGIVSELIHSKVGGEFYNYCGPFIDVRDVSKAHLVAI 257

Query: 357 ETPEVSG-RYICSSHARKVSDVIDLLKSMYPAYKFANKIVHVDDEPSF---------SSR 506
           E PE +G R + S       +++D+L   +P  K           PSF         +S+
Sbjct: 258 EKPECTGQRLVLSEGLFCCQEIVDILNEEFPQLKGKIATGEPATGPSFLEKNSCKFDNSK 317

Query: 507 KLEMLGWKIKPLEETLRDS 563
             ++LG++   L++ + D+
Sbjct: 318 TKKLLGFQFYNLKDCIVDT 336



to top

>GRE2_YEAST (Q12068) NADPH-dependent methylglyoxal reductase GRE2 (EC|
           1.1.1.283) (Genes de respuesta a estres protein 2)
          Length = 342

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 23/187 (12%)
 Frame = +3

Query: 72  DEDCWSDVDY--CRTTE-NWYNLSKTLAELQAFDYAKRSG----LDVVTVCPSLVIGPLL 230
           +E+ W+   +  C++   N Y  SK  AE  A+++ + +      ++  V P  V GP +
Sbjct: 145 NEESWNPATWESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQM 204

Query: 231 -----QPTVNASSSVIVDF--LKGEHEVKSKIRNFVDVRDLADALILVYETPEVSGRYIC 389
                +  +N S  ++     L  E ++      ++DVRD+A A ++ ++  E  G+ + 
Sbjct: 205 FDKDVKKHLNTSCELVNSLMHLSPEDKIPELFGGYIDVRDVAKAHLVAFQKRETIGQRLI 264

Query: 390 SSHAR-KVSDVIDLLKSMYPAYKF-------ANKIVHVDDEPSFSSRK-LEMLGWKIKPL 542
            S AR  + DV+D+L   +P  K         +   H     +  ++K  ++LG+K + L
Sbjct: 265 VSEARFTMQDVLDILNEDFPVLKGNIPVGKPGSGATHNTLGATLDNKKSKKLLGFKFRNL 324

Query: 543 EETLRDS 563
           +ET+ D+
Sbjct: 325 KETIDDT 331



to top

>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
 Frame = +3

Query: 111 TENWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSS-VIVDFLKGEH 287
           T  WY ++K         Y  + G D ++  P+ + GP  Q   +  +S V+   ++  H
Sbjct: 148 TNEWYAVAKIAGIKMCQAYRIQHGFDAISAMPTNLYGP--QDNFHPENSHVLPALIRRFH 205

Query: 288 EVK-------------SKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSDVIDL 428
           E K             S +R F+ V DLADA+I + +    SG    +  +     + +L
Sbjct: 206 EAKASNAAEVVVWGTGSPLREFLHVDDLADAVIFLMD--HYSGLEHVNVGSGSEVTIKEL 263

Query: 429 LKSMYPAYKFANKIVHVDDEPSFSSRKL------EMLGWKIK-PLEETLRDSVESYK 578
            + +     F  K+V    +P  + RKL      + +GWK K PL+E L   VE+YK
Sbjct: 264 AELVKEVVGFQGKLVWDSSKPDGTPRKLMDSSKIQEMGWKPKVPLKEGL---VETYK 317



to top

>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 669

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 46/165 (27%), Positives = 78/165 (47%), Gaps = 12/165 (7%)
 Frame = +3

Query: 117 NWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGE---- 284
           N Y+ +K  AE+    Y +  GL V+T   + V GP   P       +++  ++G+    
Sbjct: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL-AMRGQVLPI 215

Query: 285 HEVKSKIRNFVDVRDLADALILVYETPEVSGRY-ICSSHARKVSDVIDLLKSMYPAYKFA 461
           H   S +R+++   D+A+A  +V    EV   Y I +   R+V+DV   +  ++     A
Sbjct: 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEA 275

Query: 462 NKIVHVDDEPSFSSR------KLEMLGWKIKPL-EETLRDSVESY 575
           N I  VD+ P    R      KL+ LGW  +   EE L+ +++ Y
Sbjct: 276 N-IKFVDNRPFNDQRYFLDDQKLKKLGWSERTTWEEGLKKTMDWY 319



to top

>YGD9_YEAST (P53183) Hypothetical protein YGL039W|
          Length = 348

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
 Frame = +3

Query: 33  VMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQAFDYAKRSGLDVV----TV 200
           V+   SW      ++D W          + Y  SK  AE  A+D+ + +   +     T+
Sbjct: 148 VVNEESW------NKDTWESCQ--ANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTI 199

Query: 201 CPSLVIGPLL-----QPTVNASSSVIVDFLKGEHEVKSKIRN----FVDVRDLADALILV 353
            P  V GP L     +  +N+SS++I + +   +++     N    F+DVRD++ A +L 
Sbjct: 200 NPGFVFGPQLFADSLRNGINSSSAIIANLVS--YKLGDNFYNYSGPFIDVRDVSKAHLLA 257

Query: 354 YETPEVSGR--YICSSHARKVSDVIDLLKSMYPAYK 455
           +E PE +G+  ++C        + +D+L   +P  K
Sbjct: 258 FEKPECAGQRLFLCEDMFCS-QEALDILNEEFPQLK 292



to top

>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC|
           1.1.1.-)
          Length = 664

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
 Frame = +3

Query: 117 NWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGE---- 284
           N Y+ +K  AE+    Y +  GL V+T   + V GP   P       +++  + G+    
Sbjct: 157 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILL-AMNGKPLPI 215

Query: 285 HEVKSKIRNFVDVRDLADALILVYETPEVSGRY-ICSSHARKVSDVIDLLKSMYPAYKFA 461
           H   S +R+++   D+A+A  +V    EV+  Y I ++  R+V DV + +  ++      
Sbjct: 216 HGDGSNVRSYLYCEDVAEAFEVVLHKGEVNHVYNIGTTRERRVIDVANDISKLF-GIDPD 274

Query: 462 NKIVHVDDEPSFSSR------KLEMLGW-KIKPLEETLRDSVESY 575
           + I +V++ P    R      KL+ LGW +    EE LR ++E Y
Sbjct: 275 STIQYVENRPFNDQRYFLDDQKLKKLGWCERTNWEEGLRKTMEWY 319



to top

>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
 Frame = +3

Query: 111 TENWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGEHE 290
           T  WY ++K         Y K+ G + ++  P+ + GP  +  +N SS V+   ++  HE
Sbjct: 136 TNEWYAIAKIAGIKLCQAYRKQYGANFISAMPTNLYGPRDKFDLN-SSHVVPALIRKAHE 194

Query: 291 VKSK-------------IRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSDVIDLL 431
            K K              R+F+   D +DAL+ + +    +  +I      ++S +I+L 
Sbjct: 195 AKIKDLGCLSIWGSGTPTRDFLYSEDCSDALVFLLKHYSET-EHINIGSGGEIS-IIELA 252

Query: 432 KSMYPAYKFANKIVHVDDEPS------FSSRKLEMLGWKIK-PLEETLRDSVESY 575
             +     F   IV    +P        SS +L  +GW+ K  LE  L  S ES+
Sbjct: 253 HIVCRVVGFKGDIVFDTSKPDGTPRKLLSSERLVSMGWRPKTSLELGLAKSYESF 307



to top

>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC|
           1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose
           synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose
           synthase MUM4)
          Length = 667

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
 Frame = +3

Query: 117 NWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGE---- 284
           N Y+ +K  AE+    Y +  GL V+T   + V GP   P       +++  + G+    
Sbjct: 159 NPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKMIPKFILL-AMSGKPLPI 217

Query: 285 HEVKSKIRNFVDVRDLADALILVYETPEVSGRY-ICSSHARKVSDVIDLLKSMY-----P 446
           H   S +R+++   D+A+A  +V    E+   Y + +   R+V DV   +  ++      
Sbjct: 218 HGDGSNVRSYLYCEDVAEAFEVVLHKGEIGHVYNVGTKRERRVIDVARDICKLFGKDPES 277

Query: 447 AYKFANKIVHVDDEPSFSSRKLEMLGWKIKP-LEETLRDSVESY 575
           + +F       D       +KL+ LGW+ +   E+ L+ +++ Y
Sbjct: 278 SIQFVENRPFNDQRYFLDDQKLKKLGWQERTNWEDGLKKTMDWY 321



to top

>GALE_VIBCH (Q56623) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 328

 Score = 38.1 bits (87), Expect = 0.020
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
 Frame = +3

Query: 114 ENWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGPLLQPTVNA-----SSSVIVDFLK 278
           E+ Y LSK+ AE Q    AK S ++VV + P++V GP ++    +     S  + + F  
Sbjct: 146 EDDYGLSKSEAEKQLVALAKDSSMEVVIIRPTIVYGPGVKANFASLMRLVSKGIPLPF-- 203

Query: 279 GEHEVKSKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVS 413
               +    R+ V + +L D ++   + P+ + +    S    VS
Sbjct: 204 --GSITQNKRSLVSINNLVDLIVTCIDHPKAANQVFLVSDGHDVS 246



to top

>DFRA_SYNY3 (P73212) Putative dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)|
           (Dihydrokaempferol 4-reductase)
          Length = 343

 Score = 37.0 bits (84), Expect = 0.044
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
 Frame = +3

Query: 18  SSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQAFDYAKRSGLDVVT 197
           SSVAA+       +G+  DE   S V+        Y  SK  AE +A   A++ G D+V 
Sbjct: 121 SSVAAIGVKG---DGQRADESYQSPVEKLIGA---YKQSKYWAEQEALTAAQQ-GQDIVI 173

Query: 198 VCPSLVIGPL-LQPTVNASSSVIVDFLKGEHEVKSKI-RNFVDVRDLADALILVYE 359
           V PS  IGP  ++PT   +  +I+ FL+ +         N +DVRD+A   +L ++
Sbjct: 174 VNPSTPIGPWDIKPT--PTGEIILRFLRRQMPAYVNTGLNLIDVRDVAAGHLLAWQ 227



to top

>IPYR_COREF (Q8FMF8) Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate|
           phospho-hydrolase) (PPase)
          Length = 158

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
 Frame = +3

Query: 291 VKSKIRNFVDVRDLA---DALILVYETPEVSGRYICSSHARKVSDVIDLLKS----MYPA 449
           VKS++     + D A   D L+ V + P    RY    H + +SDV D LK      +  
Sbjct: 72  VKSRVIGVFKMTDEAGGDDKLLAVLDDP----RY---DHIQDISDVSDFLKDEIEHFFVH 124

Query: 450 YKFANKIVHVDDEPSFSSRKLEMLGWKIKP-LEETLRDSVESYKA 581
           YK   K  HVD             GW  K   E+ L DS+E YKA
Sbjct: 125 YKDLEKGKHVDGS-----------GWGDKAEAEQILADSIERYKA 158



to top

>IF2_SYNY3 (P72689) Translation initiation factor IF-2|
          Length = 1001

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +1

Query: 19  PPSLPS*RTPAGLKASPWMKTAGLTSTTAEPQRIGTTFPKH*QSFRPSI 165
           PPS P+  TP   KA+P  + AG    TA P +     P   +  RP I
Sbjct: 162 PPSKPAPPTPPAKKAAPAPRLAGPPGRTASPNKTAVPAPAKPKVNRPEI 210



to top

>Y2109_PHOLL (Q7N550) UPF0082 protein plu2109|
          Length = 247

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
 Frame = +3

Query: 6   ARGVSSVAA-----VMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQ----- 155
           ARGV S  A     ++     P G  +  +C SD      ++  +  +KT   L      
Sbjct: 71  ARGVGSDEADNMETIIYEGYGPGGTAVMVECLSDNRNRTVSDVRHAFTKTGGNLGTDGSV 130

Query: 156 AFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGEHEVKSKIRNFVDVRDLA 335
           A+ +AK+    V++  P L    +++  + A +  +  +  G  +V +    F DV+D  
Sbjct: 131 AYLFAKKG---VISYAPGLDEDAVMEAALEAGADDVETYDDGAIDVYTTPETFGDVKDAL 187

Query: 336 DALILVYETPEVS 374
           DA   V E+ EVS
Sbjct: 188 DAAGFVAESAEVS 200



to top

>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 21/173 (12%)
 Frame = +3

Query: 111 TENWYNLSKTLAELQAFDYAKRSGLDVVTVCPSLVIGP--LLQPTVNASSSVIVDFLKGE 284
           T  WY ++K         Y  + G D ++  P+ + GP     P    +S V+   ++  
Sbjct: 134 TNEWYAIAKIAGIKTCQAYRIQHGWDAISGMPTNLYGPNDNFHP---ENSHVLPALMRRF 190

Query: 285 HEVK-------------SKIRNFVDVRDLADALILVYETPEVSGRYICSSHARKVSDVID 425
           HE K             S +R F+ V DLADA + + +    SG    +  + +   + +
Sbjct: 191 HEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLD--RYSGLEHVNIGSGQEVTIRE 248

Query: 426 LLKSMYPAYKFANKIVHVDDEPS------FSSRKLEMLGWKIKPLEETLRDSV 566
           L + +     F  K+     +P         S KL  LGW  K    +LRD +
Sbjct: 249 LAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLASLGWTPK---VSLRDGL 298



to top

>KHSE_ENTFA (Q831T0) Homoserine kinase (EC 2.7.1.39) (HSK) (HK)|
          Length = 287

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 42/193 (21%), Positives = 77/193 (39%), Gaps = 26/193 (13%)
 Frame = +3

Query: 96  DYCRTTENWYNLSKTLAELQAFDYAKRSGLDVVT------VCPSLVIGPLLQPTV----- 242
           D C    + Y     L E + ++     G ++ T      +  +L I P L P V     
Sbjct: 17  DSCGIALSAYLTINVLGESEFWEIQHTLGEEISTNEENLLIQTALKIAPELTPKVIRMVS 76

Query: 243 --------NASSSVIVDFLKGEHEV-------KSKIRNFVDVRDLADALILVYETPEVSG 377
                    +SSSVIV  ++  + +       K K+R   ++    D +      P + G
Sbjct: 77  DIPLARGLGSSSSVIVAGIELANRLAHLNLSPKEKVRLATEMEGHPDNV-----APAILG 131

Query: 378 RYICSSHARKVSDVIDLLKSMYPAYKFANKIVHVDDEPSFSSRKLEMLGWKIKPLEETLR 557
            ++ +SH   V + +  +K  +P     + I  + +EP F+ +   +L  K+   E    
Sbjct: 132 DFVVASH---VENQVYHVKHHFP---MCDVIAFIPEEPLFTEKSRAVLPEKLAYKEAVAA 185

Query: 558 DSVESYKAAAVLN 596
            S+ +   AA+LN
Sbjct: 186 SSIANVMIAAILN 198



to top

>Y2494_ERWCT (Q6D499) UPF0082 protein ECA2494|
          Length = 247

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
 Frame = +3

Query: 6   ARGV-----SSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQ----- 155
           ARGV     +++  ++     P G  +  +C SD      +E  +  +KT   L      
Sbjct: 71  ARGVGGDDDTNMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKTGGNLGTDGSV 130

Query: 156 AFDYAKRSGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGEHEVKSKIRNFVDVRDLA 335
           ++ + K+    V++  P L    ++   + A +  +V +  G  +V +    F DV+D  
Sbjct: 131 SYLFTKKG---VISYAPGLDEDTVMNAALEAGADDVVTYDDGAIDVFTPWETFGDVKDAL 187

Query: 336 DALILVYETPEVS 374
           DA  L  E+ EVS
Sbjct: 188 DAAGLKAESAEVS 200



to top

>SCRB2_MOUSE (O35114) Lysosome membrane protein 2 (Lysosome membrane protein II)|
           (LIMP II) (Scavenger receptor class B member 2) (85 kDa
           lysosomal membrane sialoglycoprotein) (LGP85)
          Length = 477

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
 Frame = +3

Query: 177 SGLDVVTVCPSLVIGPLLQPTVNASSSVIVDFLKGEHEVKSKIRNFVDVRDLADALILVY 356
           SG+  +++C +     +  P    +    V  +KG H  K +  +FVD+  L   ++   
Sbjct: 320 SGVLNISICKNGAPIIMSFPHFYQADEKFVSAIKGMHPNKEEHESFVDINPLTGIIL--- 376

Query: 357 ETPEVSGRYICSSHARKVSDVIDL--LKSMYPAYKFANKIVHVDDE 488
                + R+  +++ RK+ D ++   +++M     + N+ V +D E
Sbjct: 377 ---RGAKRFQINTYVRKLDDFVETGDIRTMVFPVMYLNESVLIDKE 419



to top

>C1TM_YEAST (P09440) C-1-tetrahydrofolate synthase, mitochondrial precursor|
           (C1-THF synthase) [Includes: Methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate
           synthetase (EC 6.3.
          Length = 975

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 369 VSGRYICSSHARKVSDVIDLLKSMYPAYKFANKIVHVDDEPSFSS 503
           +SGR +  S   K +D I  +K  +P +K   KI+ V   P  S+
Sbjct: 38  LSGRKLAQSIREKANDEIQAIKLKHPNFKPTLKIIQVGARPDSST 82



to top

>RCSA_KLEAE (P05338) Colanic acid capsular biosynthesis activation protein A|
          Length = 207

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 359 FIHQDESIGKVPNIHEVSDLALYLMF-TFQEINYDRAARVHRRL 231
           F+H DES G +  I   +   L+++F +   I++DR  RV + L
Sbjct: 58  FVHDDESNGIIRQIITQNPATLFVIFMSLANIHFDRYLRVRKNL 101



to top

>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)|
          Length = 1362

 Score = 29.3 bits (64), Expect = 9.1
 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = +3

Query: 48  SWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQAFDY--AKRSGLDV 191
           +WP  KP+D +     DYC   ++  ++S   ++L+A +Y  A+  G DV
Sbjct: 373 AWPFYKPVDVEALGLHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADV 422


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,883,482
Number of Sequences: 219361
Number of extensions: 1873170
Number of successful extensions: 5309
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5289
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5253413348
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top