>dbj|AK073641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052J24, full
           insert sequence
          Length = 1232

 Score =  133 bits (67), Expect = 7e-28
 Identities = 285/355 (80%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                       
Query: 50  ctggcctgaaggcaagcccatggatgaagactgctggtctgacgtcgactactgcagaac 109
           |||| |||| |||||| |||| |||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 441 ctggtctgagggcaaggccatagatgaagattgctggtctgatgtcgattactgcagagc 500

                                                                       
Query: 110 cacagagaattggtacaacctttccaaaacactagcagagcttcaggccttcgattacgc 169
           |||  |||||||||| | ||||   |||||||| || ||| || ||||||| ||||| ||
Sbjct: 501 cactaagaattggtatacccttgggaaaacacttgcggagattgaggcctttgattatgc 560

                                                                       
Query: 170 aaagagaagcggactagacgtcgtgactgtctgtccgtcgctggtgattgggcccttgct 229
            |||||||| ||| | ||  | |||||  |||| || ||| |||||||||| || |||||
Sbjct: 561 gaagagaagtggattggatcttgtgacactctgcccatcgttggtgattggacctttgct 620

                                                                       
Query: 230 gcaacctacggtgaacgcgagcagctcggtcatagtt-gatttcttgaaaggtgaacatg 288
           |||||| || ||||| ||||||||  | |||||| || ||| || ||||||||||   ||
Sbjct: 621 gcaaccaactgtgaatgcgagcagtacagtcatacttggatgtc-tgaaaggtgattgtg 679

                                                                       
Query: 289 aggtaaagagcaagatcagaaacttcgtggatgttcgggaccttgccgatgctctcatcc 348
           ||||||| | |||  | || ||||| ||||||||  ||||  |||||||||||||  |  
Sbjct: 680 aggtaaaaatcaaactgaggaactttgtggatgtcagggatgttgccgatgctcttcttt 739

                                                                  
Query: 349 tggtgtatgaaaccccagaggtctccggacgctatatatgcagttcacatgcaag 403
           |  ||||||||||||||| |||||||||||| || || ||||||||||| |||||
Sbjct: 740 tactgtatgaaaccccaggggtctccggacgatacatctgcagttcacacgcaag 794



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 505 ggaagcttgagatgctgggctggaaaatcaagccacttgaagagaccctcagggacagtg 564
           ||||||| |||| ||| || ||||||||||||||| |||| || || |||||||||||||
Sbjct: 896 ggaagctagagaagctaggatggaaaatcaagccatttgaggaaacactcagggacagtg 955

                  
Query: 565 tcgaatc 571
           | |||||
Sbjct: 956 ttgaatc 962

>dbj|AK063958.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-G03, full
            insert sequence
          Length = 1737

 Score =  133 bits (67), Expect = 7e-28
 Identities = 285/355 (80%), Gaps = 2/355 (0%)
 Strand = Plus / Plus

                                                                        
Query: 50   ctggcctgaaggcaagcccatggatgaagactgctggtctgacgtcgactactgcagaac 109
            |||| |||| |||||| |||| |||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 888  ctggtctgagggcaaggccatagatgaagattgctggtctgatgtcgattactgcagagc 947

                                                                        
Query: 110  cacagagaattggtacaacctttccaaaacactagcagagcttcaggccttcgattacgc 169
            |||  |||||||||| | ||||   |||||||| || ||| || ||||||| ||||| ||
Sbjct: 948  cactaagaattggtatacccttgggaaaacacttgcggagattgaggcctttgattatgc 1007

                                                                        
Query: 170  aaagagaagcggactagacgtcgtgactgtctgtccgtcgctggtgattgggcccttgct 229
             |||||||| ||| | ||  | |||||  |||| || ||| |||||||||| || |||||
Sbjct: 1008 gaagagaagtggattggatcttgtgacactctgcccatcgttggtgattggacctttgct 1067

                                                                        
Query: 230  gcaacctacggtgaacgcgagcagctcggtcatagtt-gatttcttgaaaggtgaacatg 288
            |||||| || ||||| ||||||||  | |||||| || ||| || ||||||||||   ||
Sbjct: 1068 gcaaccaactgtgaatgcgagcagtacagtcatacttggatgtc-tgaaaggtgattgtg 1126

                                                                        
Query: 289  aggtaaagagcaagatcagaaacttcgtggatgttcgggaccttgccgatgctctcatcc 348
            ||||||| | |||  | || ||||| ||||||||  ||||  |||||||||||||  |  
Sbjct: 1127 aggtaaaaatcaaactgaggaactttgtggatgtcagggatgttgccgatgctcttcttt 1186

                                                                   
Query: 349  tggtgtatgaaaccccagaggtctccggacgctatatatgcagttcacatgcaag 403
            |  ||||||||||||||| |||||||||||| || || ||||||||||| |||||
Sbjct: 1187 tactgtatgaaaccccaggggtctccggacgatacatctgcagttcacacgcaag 1241



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                        
Query: 505  ggaagcttgagatgctgggctggaaaatcaagccacttgaagagaccctcagggacagtg 564
            ||||||| |||| ||| || ||||||||||||||| |||| || || |||||||||||||
Sbjct: 1343 ggaagctagagaagctaggatggaaaatcaagccatttgaggaaacactcagggacagtg 1402

                   
Query: 565  tcgaatc 571
            | |||||
Sbjct: 1403 ttgaatc 1409

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 352      tgtatgaaaccccagaggtctccggacgctatatatgcagttcacatgcaag 403
                ||||||||||||||| |||||||||||| || || ||||||||||| |||||
Sbjct: 24704051 tgtatgaaaccccaggggtctccggacgatacatctgcagttcacacgcaag 24704000



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                            
Query: 50       ctggcctgaaggcaagcccatggatgaagactgctggtctgacgtcgactactgcagaac 109
                |||| |||| |||||| |||| |||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 24705599 ctggtctgagggcaaggccatagatgaagattgctggtctgatgtcgattactgcagagc 24705540

                   
Query: 110      cac 112
                |||
Sbjct: 24705539 cac 24705537



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                            
Query: 505      ggaagcttgagatgctgggctggaaaatcaagccacttgaagagaccctcagggacagtg 564
                ||||||| |||| ||| || ||||||||||||||| |||| || || |||||||||||||
Sbjct: 24703728 ggaagctagagaagctaggatggaaaatcaagccatttgaggaaacactcagggacagtg 24703669

                       
Query: 565      tcgaatc 571
                | |||||
Sbjct: 24703668 ttgaatc 24703662



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                            
Query: 135      aaaacactagcagagcttcaggccttcgattacgcaaagagaagcggactagacgtcgtg 194
                |||||||| || ||| || ||||||| ||||| || |||||||| ||| | ||  | |||
Sbjct: 24704612 aaaacacttgcggagattgaggcctttgattatgcgaagagaagtggattggatcttgtg 24704553

                                                                           
Query: 195      actgtctgtccgtcgctggtgattgggcccttgctgcaacctacggtgaacgcgagcag 253
                ||  |||| || ||| |||||||||| || ||||||||||| || ||||| ||||||||
Sbjct: 24704552 acactctgcccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcag 24704494

>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0029G06
          Length = 169711

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 352   tgtatgaaaccccagaggtctccggacgctatatatgcagttcacatgcaag 403
             ||||||||||||||| |||||||||||| || || ||||||||||| |||||
Sbjct: 37732 tgtatgaaaccccaggggtctccggacgatacatctgcagttcacacgcaag 37681



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 50    ctggcctgaaggcaagcccatggatgaagactgctggtctgacgtcgactactgcagaac 109
             |||| |||| |||||| |||| |||||||| ||||||||||| ||||| ||||||||| |
Sbjct: 39280 ctggtctgagggcaaggccatagatgaagattgctggtctgatgtcgattactgcagagc 39221

                
Query: 110   cac 112
             |||
Sbjct: 39220 cac 39218



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 505   ggaagcttgagatgctgggctggaaaatcaagccacttgaagagaccctcagggacagtg 564
             ||||||| |||| ||| || ||||||||||||||| |||| || || |||||||||||||
Sbjct: 37409 ggaagctagagaagctaggatggaaaatcaagccatttgaggaaacactcagggacagtg 37350

                    
Query: 565   tcgaatc 571
             | |||||
Sbjct: 37349 ttgaatc 37343



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 96/119 (80%)
 Strand = Plus / Minus

                                                                         
Query: 135   aaaacactagcagagcttcaggccttcgattacgcaaagagaagcggactagacgtcgtg 194
             |||||||| || ||| || ||||||| ||||| || |||||||| ||| | ||  | |||
Sbjct: 38293 aaaacacttgcggagattgaggcctttgattatgcgaagagaagtggattggatcttgtg 38234

                                                                        
Query: 195   actgtctgtccgtcgctggtgattgggcccttgctgcaacctacggtgaacgcgagcag 253
             ||  |||| || ||| |||||||||| || ||||||||||| || ||||| ||||||||
Sbjct: 38233 acactctgcccatcgttggtgattggacctttgctgcaaccaactgtgaatgcgagcag 38175

>gb|AY008295.1| Triticum aestivum cinnamoyl-CoA reductase mRNA, partial cds
          Length = 498

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 226 tgctgcaacctacggtgaacgcgagca 252
           |||||||||||||||||||||||||||
Sbjct: 113 tgctgcaacctacggtgaacgcgagca 139

>gb|AC151729.6| Mus musculus BAC clone RP24-74F2 from chromosome 9, complete sequence
          Length = 224139

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 47     cagctggcctgaaggcaagccc 68
              ||||||||||||||||||||||
Sbjct: 122663 cagctggcctgaaggcaagccc 122642

>ref|XM_535214.2| PREDICTED: Canis familiaris similar to Histidyl-tRNA synthetase
            homolog (Histidine--tRNA ligase homolog) (HisRS)
            (LOC478035), mRNA
          Length = 1667

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   ggatgaagactgctggtctga 91
            |||||||||||||||||||||
Sbjct: 1336 ggatgaagactgctggtctga 1356

>gb|AC078975.6| Homo sapiens BAC clone RP11-107P22 from 2, complete sequence
          Length = 12794

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 294  aagagcaagatcagaaacttc 314
            |||||||||||||||||||||
Sbjct: 8285 aagagcaagatcagaaacttc 8265

>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete
              sequences
          Length = 211652

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 118    attggtacaacctttccaaaa 138
              |||||||||||||||||||||
Sbjct: 173352 attggtacaacctttccaaaa 173372

>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence
          Length = 180633

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 136    aaacactagcagagcttcaggcct 159
              |||||||||||||||||| |||||
Sbjct: 125113 aaacactagcagagcttctggcct 125136

>ref|XM_646460.1| Entamoeba histolytica HM-1:IMSS arginyl-tRNA synthetase
           (159.t00014) partial mRNA
          Length = 1722

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 265 ttgatttcttgaaaggtgaa 284
           ||||||||||||||||||||
Sbjct: 25  ttgatttcttgaaaggtgaa 6

>emb|AL136162.18| Human DNA sequence from clone RP11-560J1 on chromosome 6 Contains the 5'
              end of the JMJ gene for jumonji protein, a novel gene and
              one CpG island, complete sequence
          Length = 129135

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     ctactgcagaaccacagaga 117
              ||||||||||||||||||||
Sbjct: 122131 ctactgcagaaccacagaga 122112

>gb|AC010188.29| Homo sapiens 12 BAC RP11-225E24 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158591

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    tatatatgcagttcacatgc 400
              ||||||||||||||||||||
Sbjct: 129111 tatatatgcagttcacatgc 129092

>gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gene, complete cds
          Length = 5799

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 209  gctggtgattgggcccttgctgcaacctacggtgaacgcgagca 252
            ||||||||| || ||| ||||||| || ||||||||||| ||||
Sbjct: 2831 gctggtgatcggccccctgctgcagccgacggtgaacgccagca 2874

>gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRNA, complete cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 209 gctggtgattgggcccttgctgcaacctacggtgaacgcgagca 252
           ||||||||| || ||| ||||||| || ||||||||||| ||||
Sbjct: 758 gctggtgatcggccccctgctgcagccgacggtgaacgccagca 801

>gb|AC021233.9| Homo sapiens chromosome 11, clone RP11-215H22, complete sequence
          Length = 159641

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     tgaaggcaagcccatggatg 75
              ||||||||||||||||||||
Sbjct: 124463 tgaaggcaagcccatggatg 124482

>gb|AC154772.2| Mus musculus BAC clone RP24-448H7 from chromosome 16, complete sequence
          Length = 169374

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   acctttccaaaacactagca 146
             ||||||||||||||||||||
Sbjct: 79794 acctttccaaaacactagca 79775

>dbj|AK030610.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330438F16 product:hypothetical
           protein, full insert sequence
          Length = 2632

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 50  ctggcctgaaggcaagcccatgga 73
           |||||||| |||||||||||||||
Sbjct: 798 ctggcctgcaggcaagcccatgga 775

>gb|AC046135.15| Homo sapiens 12 BAC RP11-295B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 175833

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 381   tatatatgcagttcacatgc 400
             ||||||||||||||||||||
Sbjct: 38320 tatatatgcagttcacatgc 38339

>gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome 16, complete sequence
          Length = 256130

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     ctggcctgaaggcaagcccatgga 73
              |||||||| |||||||||||||||
Sbjct: 133621 ctggcctgcaggcaagcccatgga 133644

>gb|AC155247.2| Mus musculus BAC clone RP24-302C23 from chromosome 12, complete
            sequence
          Length = 144348

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 97   actactgcagaaccacagag 116
            ||||||||||||||||||||
Sbjct: 6762 actactgcagaaccacagag 6781

>gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, complete sequence
          Length = 181511

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     gatgaagactgctggtctga 91
              ||||||||||||||||||||
Sbjct: 111947 gatgaagactgctggtctga 111928

>gb|AC007448.14| Homo sapiens chromosome 17, clone RP11-401F2, complete sequence
          Length = 195558

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     gatgaagactgctggtctga 91
              ||||||||||||||||||||
Sbjct: 121533 gatgaagactgctggtctga 121514

>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00
          Length = 1457619

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    acaacctttccaaaacacta 143
              ||||||||||||||||||||
Sbjct: 252259 acaacctttccaaaacacta 252240

>gb|U50188.1|CPU50188 Cavia porcellus CGRP-receptor component protein mRNA, complete cds
          Length = 1736

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 573  tacaaggctgcagctgtcttgaattgaa 600
            |||||||||||| |||| ||||||||||
Sbjct: 1210 tacaaggctgcatctgttttgaattgaa 1237

>gb|AC117673.18| Mus musculus chromosome 1, clone RP23-390I1, complete sequence
          Length = 182102

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     gaaggcaagcccatggatga 76
              ||||||||||||||||||||
Sbjct: 109697 gaaggcaagcccatggatga 109678

>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
             sequence
          Length = 165908

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    ctggcctgaaggcaagcccatgga 73
             |||||||| |||||||||||||||
Sbjct: 19066 ctggcctgtaggcaagcccatgga 19089

>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence
          Length = 193902

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     actactgcagaaccacagag 116
              ||||||||||||||||||||
Sbjct: 189834 actactgcagaaccacagag 189853

>gb|AC101299.16| Mus musculus chromosome 1, clone RP23-103M17, complete sequence
          Length = 164091

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 264   gttgatttcttgaaaggtgaacat 287
             ||||||||| ||||||||||||||
Sbjct: 21365 gttgatttcctgaaaggtgaacat 21388


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,419,112
Number of Sequences: 3902068
Number of extensions: 4419112
Number of successful extensions: 76249
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76148
Number of HSP's gapped (non-prelim): 99
length of query: 600
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 577
effective length of database: 17,143,297,704
effective search space: 9891682775208
effective search space used: 9891682775208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)