Clone Information

BLAST Search Result

Clone Name	bah62l21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 ...	39	0.007
2	FBX11_RAT (Q7TSL3) F-box only protein 11	39	0.007
3	FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated ...	39	0.007
4	FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	39	0.007
5	YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7	38	0.019
6	FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 ...	37	0.042
7	FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 ...	36	0.072
8	FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leuci...	36	0.072
9	JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylatio...	36	0.072
10	FBX31_HUMAN (Q5XUX0) F-box only protein 31	36	0.072
11	JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylatio...	35	0.12
12	JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylatio...	34	0.21
13	POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding...	34	0.28
14	YL127_MIMIV (Q5UPK8) Putative F-box protein L127	34	0.28
15	FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leuci...	34	0.28
16	FBX7_HUMAN (Q9Y3I1) F-box only protein 7	33	0.36
17	FBXW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40 ...	33	0.36
18	FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leuci...	33	0.36
19	FXL20_MOUSE (Q9CZV8) F-box/LRR-repeat protein 20 (F-box and leuc...	33	0.47
20	FXL20_HUMAN (Q96IG2) F-box/LRR-repeat protein 20 (F-box and leuc...	33	0.47
21	FXL20_RAT (Q9QZH7) F-box/LRR-repeat protein 20 (F-box and leucin...	33	0.47
22	SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box p...	33	0.61
23	FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ...	33	0.61
24	JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation...	33	0.61
25	JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylatio...	33	0.61
26	FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leuci...	32	0.80
27	FBX3_MOUSE (Q9DC63) F-box only protein 3	32	0.80
28	FBX24_HUMAN (O75426) F-box only protein 24	32	0.80
29	ANDR_CROCR (Q8MIK0) Androgen receptor (Dihydrotestosterone recep...	32	0.80
30	FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leuci...	32	1.0
31	FBXL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leuci...	32	1.4
32	FBXL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leuci...	32	1.4
33	FBX3_HUMAN (Q9UK99) F-box only protein 3	32	1.4
34	JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylatio...	31	2.3
35	FBXL8_HUMAN (Q96CD0) F-box/LRR-repeat protein 8 (F-box and leuci...	31	2.3
36	JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylatio...	30	3.0
37	FBX16_HUMAN (Q8IX29) F-box only protein 16	30	3.0
38	FBX24_MOUSE (Q9D417) F-box only protein 24	30	4.0
39	POF6_SCHPO (O74854) F-box protein pof6	30	5.2
40	SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy pr...	30	5.2
41	FXL13_MOUSE (Q8CDU4) F-box/LRR-repeat protein 13 (F-box and leuc...	30	5.2
42	SCONB_EMENI (Q00659) Sulfur metabolite repression control protein	30	5.2
43	FBX4_MOUSE (Q8CHQ0) F-box only protein 4	30	5.2
44	YL126_MIMIV (Q5UPK2) Putative F-box protein L126	29	6.8
45	SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box p...	29	8.9
46	UFO1_YEAST (Q04511) Ubiquitin ligase complex F-box protein UFO1	29	8.9

>FBXW7_HUMAN (Q969H0) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBX30) (hCdc4) (Archipelago homolog)
           (hAgo) (SEL-10)
          Length = 707

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 376 PQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           PQ      + +P EL L +  FL  +DL+  A  CR+    A D  LW
Sbjct: 274 PQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 321

to top

>FBX11_RAT (Q7TSL3) F-box only protein 11|
          Length = 843

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +1

Query: 319 HQKRARKEKGKGKVLTEGPPQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAA 498
           H+ +  +  GK + L+  P +    +   +P E+ L+IF +L  +DL   A VC+  +  
Sbjct: 48  HRAKRARVSGKSQDLSAAPAE--QYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSEL 105

Query: 499 ASDETLW 519
           A+D  LW
Sbjct: 106 ANDPILW 112

to top

>FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated protein VIT-1)|
          Length = 843

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 20/67 (29%), Positives = 35/67 (52%)
 Frame = +1

Query: 319 HQKRARKEKGKGKVLTEGPPQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAA 498
           H+ +  +  GK + L+  P +    +   +P E+ L+IF +L  +DL   A VC+  +  
Sbjct: 48  HRAKRARVSGKSQDLSAAPAE--QYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRFSEL 105

Query: 499 ASDETLW 519
           A+D  LW
Sbjct: 106 ANDPILW 112

to top

>FBXW7_MOUSE (Q8VBV4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (F-box protein FBW7) (F-box protein Fbxw6)
           (F-box-WD40 repeat protein 6) (SEL-10)
          Length = 629

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 376 PQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           PQ      + +P EL L +  FL  +DL+  A  CR+    A D  LW
Sbjct: 196 PQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 243

to top

>YKK7_CAEEL (P34284) Hypothetical F-box/LRR-repeat protein C02F5.7|
          Length = 466

 Score = 37.7 bits (86), Expect = 0.019
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 358 VLTEGPPQIDTGMFTNV-PPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           + T  P Q+D  +   V P E+ L++F FL ++ L   A VCR  +  A D + W
Sbjct: 43  ITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNW 97

to top

>FBXW5_MOUSE (Q9QXW2) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 573

 Score = 36.6 bits (83), Expect = 0.042
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 382 IDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +D G    +P  L  QIF  L   D+++  LVCR   A + DE LW
Sbjct: 1   MDEGGLPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLW 46

to top

>FBXW5_HUMAN (Q969U6) F-box/WD-repeat protein 5 (F-box and WD-40 domain protein|
           5)
          Length = 566

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +1

Query: 382 IDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +D G    +P  L  QIF  L   D+++  LVCR   A + DE LW
Sbjct: 1   MDEGGTPLLPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLW 46

to top

>FBXL7_HUMAN (Q9UJT9) F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat|
           protein 7) (F-box protein FBL6/FBL7)
          Length = 491

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 18/48 (37%), Positives = 22/48 (45%)
 Frame = +1

Query: 376 PQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           PQ +      +P    +QIF FL +  L  CA VCR     A D  LW
Sbjct: 107 PQKEQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLW 154

to top

>JHD1B_HUMAN (Q8NHM5) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
            (Protein JEMMA) (Jumonji containing domain
            EMSY-interactor methyltr
          Length = 1336

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 382  IDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            +D G    +  E+++ +F +LS +DL  C  VCR  N    D+ LW
Sbjct: 1057 LDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLW 1102

to top

>FBX31_HUMAN (Q5XUX0) F-box only protein 31|
          Length = 539

 Score = 35.8 bits (81), Expect = 0.072
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +1

Query: 322 QKRARKEKGKGKVLTEGP-PQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAA 498
           ++R     G G  L  GP P         +PPEL ++IF  L   DL S A VC      
Sbjct: 41  EERIEASAGVGGGLCAGPSPPPPRCSLLELPPELLVEIFASLPGTDLPSLAQVCTKFRRI 100

Query: 499 ASDETLW 519
              +T+W
Sbjct: 101 LHTDTIW 107

to top

>JHD1B_MOUSE (Q6P1G2) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10) (F-box protein FBL10)
          Length = 1309

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +1

Query: 382  IDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            +D G    +  E+++ +F +LS  DL  C  VCR  N    D+ LW
Sbjct: 1030 LDDGAAHVMHREVWMAVFSYLSHRDLCVCMRVCRTWNRWCCDKRLW 1075

to top

>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B (EC|
            1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and
            leucine-rich repeat protein 10)
          Length = 1259

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 415  ELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            E+++ IF +LS  DL  C  +CR  N    D+ LW
Sbjct: 991  EVWMAIFSYLSHRDLCICMRICRTWNRWCCDKRLW 1025

to top

>POF10_SCHPO (Q9P7W4) F-box/WD-repeat protein pof10 (Skp1-binding protein 2)|
          Length = 662

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           N+P E+ + IF FL    L+S    C++     SD+  W
Sbjct: 33  NLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSW 71

to top

>YL127_MIMIV (Q5UPK8) Putative F-box protein L127|
          Length = 269

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 394 MFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           MF  +  E+   IF FL     I C+ VCR     + DE LW
Sbjct: 1   MFDLLSEEMVYHIFCFLDLSSFIKCSRVCRKWRRISDDEKLW 42

to top

>FBXL5_MOUSE (Q8C2S5) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5)
          Length = 690

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +1

Query: 400 TNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           T++PPE+ L IF +L+ ++L  C+ V    +  A   +LW
Sbjct: 206 THLPPEVMLSIFSYLNPQELCRCSQVSTKWSQLAKTGSLW 245

to top

>FBX7_HUMAN (Q9Y3I1) F-box only protein 7|
          Length = 522

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P EL L+IF+ L    ++S + VCR +  A++D  LW
Sbjct: 335 LPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLW 372

to top

>FBXW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40 domain protein|
           8) (F-box only protein 29)
          Length = 598

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P EL + IF++L  ++L  CA V +     A DE LW
Sbjct: 119 LPYELAINIFQYLDRKELGRCAQVSKTWKVIAEDEVLW 156

to top

>FBXL8_MOUSE (Q8CIG9) F-box/LRR-repeat protein 8 (F-box and leucine-rich repeat|
           protein 8) (F-box protein FBL8)
          Length = 374

 Score = 33.5 bits (75), Expect = 0.36
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           N+P E+   IF+ L   DL     VCR   AAA++ T+W
Sbjct: 7   NLPEEVLALIFRDLPLRDLAVATRVCRAWAAAAANSTVW 45

to top

>FXL20_MOUSE (Q9CZV8) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 436

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P EL L+IF FL    L  CA V R  N  A D + W
Sbjct: 28  LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNW 65

to top

>FXL20_HUMAN (Q96IG2) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 436

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P EL L+IF FL    L  CA V R  N  A D + W
Sbjct: 28  LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNW 65

to top

>FXL20_RAT (Q9QZH7) F-box/LRR-repeat protein 20 (F-box and leucine-rich repeat|
           protein 20) (F-box/LRR-repeat protein 2-like)
          Length = 276

 Score = 33.1 bits (74), Expect = 0.47
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P EL L+IF FL    L  CA V R  N  A D + W
Sbjct: 28  LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNW 65

to top

>SKP2_HUMAN (Q13309) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (p45skp2)
           (F-box/LRR-repeat protein 1)
          Length = 424

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           ++P EL L IF  L   +L+  + VC+     ASDE+LW
Sbjct: 99  SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 137

to top

>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)|
            (Protein archipelago)
          Length = 1326

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 376  PQIDTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            PQ      + +P EL L +  +L  +DL+  A  CR       D  LW
Sbjct: 885  PQFQRDFISLLPRELALFVLSYLEPKDLLRAAQTCRSWRFLCDDNLLW 932

to top

>JHD1_DROME (Q9VHH9) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1345

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 412  PELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            P +   IF++L  + L++C  VC+  + AA D  LW
Sbjct: 1067 PTVLKIIFRYLPQDTLVTCCSVCKVWSNAAVDPDLW 1102

to top

>JHD1A_XENTR (Q5U263) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11)
          Length = 1146

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +1

Query: 319  HQKRARKEKGKGKVLTEGPPQIDTGM---FTNVPPELFLQIFKFLSSEDLISCALVCRFM 489
            HQ   R+E+ + +   E    +  G     T++  +++L +F +L+ E+L  C  VC+  
Sbjct: 845  HQDEEREEEEEEEEEEEETENVMLGQRKDSTSMQKDVWLSVFHYLTHEELCICMRVCKAW 904

Query: 490  NAAASDETLW 519
                 D+ LW
Sbjct: 905  YKWGCDKRLW 914

to top

>FBXL5_HUMAN (Q9UKA1) F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat|
           protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like
           protein)
          Length = 691

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 400 TNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           T++PPE+ L IF +L+ ++L  C+ V    +      +LW
Sbjct: 206 THLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLW 245

to top

>FBX3_MOUSE (Q9DC63) F-box only protein 3|
          Length = 480

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 379 QIDTGMFT--NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           + +TG+ T  ++P +  L I  F+   DLI+C  V R ++  ++ + LW
Sbjct: 5   EAETGLLTLESLPTDPLLLILSFVDYRDLINCCYVSRRLSQLSTHDPLW 53

to top

>FBX24_HUMAN (O75426) F-box only protein 24|
          Length = 580

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +1

Query: 409 PPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           PPEL   I  FL   DL++    CR+ +     E +W
Sbjct: 43  PPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVW 79

to top

>ANDR_CROCR (Q8MIK0) Androgen receptor (Dihydrotestosterone receptor)|
          Length = 912

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +3

Query: 432 LQVPLLGGPHLVCPCLPLHE 491
           +  PLLGGP  VCPC PL E
Sbjct: 276 MYAPLLGGPPPVCPCAPLTE 295

to top

>FBXL6_HUMAN (Q8N531) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6) (FBL6A)
          Length = 539

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
 Frame = +1

Query: 367 EGPPQIDTGMFTNVPPELFLQIFKFLSSED-----LISCALVCRFMNAAASDETLW 519
           EGP   D G    +P E+ +QIF  L + D     L   A VCR    AAS   LW
Sbjct: 105 EGP---DAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157

to top

>FBXL2_MOUSE (Q8BH16) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat|
           protein 2)
          Length = 423

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 385 DTGMFTN-VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           D G+    +P EL L+IF FL    L  CA + +  N  A D + W
Sbjct: 7   DDGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNW 52

to top

>FBXL2_HUMAN (Q9UKC9) F-box/LRR-repeat protein 2 (F-box and leucine-rich repeat|
           protein 2) (F-box protein FBL2/FBL3)
          Length = 423

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 385 DTGMFTN-VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           D G+    +P EL L+IF FL    L  CA + +  N  A D + W
Sbjct: 7   DEGLINKKLPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNW 52

to top

>FBX3_HUMAN (Q9UK99) F-box only protein 3|
          Length = 471

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           ++P +  L I  FL   DLI+C  V R ++  +S + LW
Sbjct: 15  SLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLW 53

to top

>JHD1A_MOUSE (P59997) JmjC domain-containing histone demethylation protein 1A|
           (EC 1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
           leucine-rich repeat protein 11)
          Length = 1161

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 415 ELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           E+++ +F++LS ++L  C  VC+       D+ LW
Sbjct: 895 EVWMSVFRYLSRKELCECMRVCKTWYKWCCDKRLW 929

to top

>FBXL8_HUMAN (Q96CD0) F-box/LRR-repeat protein 8 (F-box and leucine-rich repeat|
           protein 8) (F-box protein FBL8)
          Length = 374

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P E+   IF+ LS  D  + A VCR   AAA+   +W
Sbjct: 8   LPEEVLALIFRHLSLRDRAAAARVCRAWAAAATCSAVW 45

to top

>JHD1A_HUMAN (Q9Y2K7) JmjC domain-containing histone demethylation protein 1A (EC|
            1.14.11.-) (F-box/LRR-repeat protein 11) (F-box and
            leucine-rich repeat protein 11) (F-box protein FBL7)
            (F-box protein Lilina)
          Length = 1162

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +1

Query: 415  ELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
            E+++ +F++LS  +L  C  VC+       D+ LW
Sbjct: 896  EVWMSVFRYLSRRELCECMRVCKTWYKWCCDKRLW 930

to top

>FBX16_HUMAN (Q8IX29) F-box only protein 16|
          Length = 292

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 400 TNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           T +P  L L IF FL    L  CA VC      A  + LW
Sbjct: 90  TKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAELDQLW 129

to top

>FBX24_MOUSE (Q9D417) F-box only protein 24|
          Length = 589

 Score = 30.0 bits (66), Expect = 4.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 409 PPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           PPEL   I  FL  +DL++    C + +     E +W
Sbjct: 30  PPELVEHIVSFLPVKDLVALGQTCHYFHEVCDAEGVW 66

to top

>POF6_SCHPO (O74854) F-box protein pof6|
          Length = 872

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +1

Query: 418 LFLQIFKFLSSEDLISCALVCR 483
           ++L+IF  +S+ DL +C LVCR
Sbjct: 37  IYLKIFTLISTPDLCNCRLVCR 58

to top

>SNE_ARATH (Q9LUB6) F-box protein SNE (Protein SNEEZY) (Sleepy protein 2)|
          Length = 157

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +1

Query: 415 ELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           ++ ++I + L    L S A VCR  +A A ++++W
Sbjct: 33  DVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIW 67

to top

>FXL13_MOUSE (Q8CDU4) F-box/LRR-repeat protein 13 (F-box and leucine-rich repeat|
           protein 13)
          Length = 790

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +P +  LQIF +L+ +D+++C+ V R   A     +LW
Sbjct: 243 LPEQAILQIFLYLTFKDMMACSRVNRSWMAMIQRGSLW 280

to top

>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein|
          Length = 678

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +1

Query: 400 TNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           T +PPE+  +I  +L +  L   + V R   A A D+ +W
Sbjct: 182 TALPPEIAFKILCYLDTTSLCKASQVSRGWRALADDDVVW 221

to top

>FBX4_MOUSE (Q8CHQ0) F-box only protein 4|
          Length = 385

 Score = 29.6 bits (65), Expect = 5.2
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +1

Query: 385 DTGMFTNVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           +T   T +P ++ L I  FLS  DL        + N    D  LW
Sbjct: 53  ETSALTRLPVDVQLYILSFLSPHDLCQLGSTDHYWNKTVRDPILW 97

to top

>YL126_MIMIV (Q5UPK2) Putative F-box protein L126|
          Length = 255

 Score = 29.3 bits (64), Expect = 6.8
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
 Frame = +1

Query: 406 VPPELFLQIFKFLSSEDLISCALVCRF----MNAAASDETLW 519
           +P E+   +F FL  ++LI+C+  C           SD+ LW
Sbjct: 2   LPEEILFMVFSFLDVKELIACSHACSHACSQWRRICSDKLLW 43

to top

>SKP2_MOUSE (Q9Z0Z3) S-phase kinase-associated protein 2 (F-box protein Skp2)|
           (Cyclin A/CDK2-associated protein p45) (F-box/WD-40
           protein 1) (FWD1)
          Length = 424

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           ++P EL L IF  L   +L+  + VC+     + DE+LW
Sbjct: 99  SLPDELLLGIFSCLCLPELLRVSGVCKRWYRLSLDESLW 137

to top

>UFO1_YEAST (Q04511) Ubiquitin ligase complex F-box protein UFO1|
          Length = 668

 Score = 28.9 bits (63), Expect = 8.9
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 403 NVPPELFLQIFKFLSSEDLISCALVCRFMNAAASDETLW 519
           ++PPE+ + IF  L  +DL +   +         DE LW
Sbjct: 10  DLPPEILINIFSHLDEKDLFTLQELSTHFRNLIHDEELW 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,073,862
Number of Sequences: 219361
Number of extensions: 456863
Number of successful extensions: 1764
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3927707336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result