>YAB9_SCHPO (Q09809) Hypothetical protein C2G11.09 in chromosome I|
          Length = 796

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 49/196 (25%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
 Frame = +3

Query: 30   IKSFIQGFLPGLALKIFLIVLPTILMFMSQFEGLISQSSLERRTASKYFIFLFFNVFLGS 209
            + S ++ FLP L   +F+ + P +  ++S  +GL S++  E     K + +LF N FL  
Sbjct: 490  LNSLLRTFLPTLVYSLFISISPFLFRWLSSMQGLSSRAEEEIYAVGKNYAYLFVNFFLVY 549

Query: 210  IVTGSA-----LEQLNTYLHASANDIPRIIGVAIPMKATFFITYVMVDGWTGVALEILRI 374
            ++ GS       +   ++ H  AN +P         +A FFI  +++ G     L+++++
Sbjct: 550  VIAGSTSIWELAKDTTSFAHFLANRLPH--------QAQFFIDLIVLQGIGMFPLKLIQL 601

Query: 375  RAFVLYHLKNFFLVKTEKDRE-EAMDPGSICFYWSEPRIQLYFLLGLVYAAVTPLLLPFI 551
                 Y ++  F+  +   ++ E  D  S+  +  +P      L+ L Y+ ++PL+L F 
Sbjct: 602  GKLSSYFVRRSFVPYSIASKKFETPDSFSVGIFLPQP--MFIMLICLCYSIISPLILVFG 659

Query: 552  LVFFALGYVVYRHQII 599
            L++F +G++VY++++I
Sbjct: 660  LIYFIIGFLVYKYELI 675

>YM8G_YEAST (Q03516) Hypothetical 107.7 kDa protein in TSP3-IPP2 intergenic|
           region
          Length = 953

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
 Frame = +3

Query: 57  PGLALKIFLIVLPTILMFMSQFEGLISQSSLERRTASKYFIFLFFNVFLGSIVTGSALEQ 236
           P +AL + +  LP  +  M+  +G  S+ ++E  T   YF F    VFL + ++ +A   
Sbjct: 444 PTVALAVLMSFLPKFIRGMAITQGAPSKQNVEYFTQQAYFAFQVIQVFLVTTLSSAATST 503

Query: 237 LNTYLHASANDIPRIIGVAIPMKATFFITYVMVDGWTGVALEILRIRAFVLYHLKNFFLV 416
           + T +         ++   +P  + FF++YV++ G +  +  +L+I   +L+++   FL 
Sbjct: 504 V-TEIVKEPTKAMDLLASNLPKASNFFMSYVILQGLSISSGALLQIVPLILFYVLGAFLD 562

Query: 417 KTEKDREEAMDPGSICFYWSEPRIQLYFLLGLV---YAAVTPLLLPFILVFFALGYVVYR 587
            T + +      G     W      +Y  L ++   Y+ ++PL+L F  V F L Y+ Y 
Sbjct: 563 GTVRKKWNRF-CGLSSMQWG-TAFPVYTNLAVITFSYSIISPLILLFAAVAFFLLYIAYL 620

Query: 588 HQIINVY 608
           + +  VY
Sbjct: 621 YNLTYVY 627

>SPO75_YEAST (Q07798) Sporulation-specific protein 75|
          Length = 868

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 7/190 (3%)
 Frame = +3

Query: 30   IKSFIQGFLPGLALKIFLIVLPTILMFMSQFEGLISQSSLERRTASKYFIFLFFNVFLGS 209
            I+   +  +P + L I + ++P    ++S   GL + + +E    + YF+F+F ++F+  
Sbjct: 521  IREVAKNLIPIVTLIIIIEIVPYFFRWLSYLRGLKTGAQIEADVQNWYFVFVFIHLFV-V 579

Query: 210  IVTGSALEQLNTYLHASANDIPRIIGVAIPMKATFFITYVMVDGWTGVALEILRIRAFVL 389
            +   S    +   L  +   IP ++   +P  A FF ++V++ G       +LRI+  +L
Sbjct: 580  VTISSGFSIIIERLLNNPVSIPALLANDLPKCANFFCSFVLIRGMAYAGGNLLRIKE-LL 638

Query: 390  YHLKNFFLVKTEKDREEAMDPGSICFYWSE--PRIQLYFLLGLVYAAVTPLLL-----PF 548
            + L  +   ++    +      S+ F      P   +   +G++Y+ V P++L      F
Sbjct: 639  FELFYYKWKRSTPHAQFKRLKTSLFFQLGSIYPIFSVLGCIGIIYSVVAPIILLLCCISF 698

Query: 549  ILVFFALGYV 578
             +VFF+  Y+
Sbjct: 699  SMVFFSFSYL 708

>AMPN_ECOLI (P04825) Aminopeptidase N (EC 3.4.11.2) (Alpha-aminoacylpeptide|
           hydrolase)
          Length = 869

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 6/80 (7%)
 Frame = -1

Query: 400 FKWYSTNALIL------SISRATPVQPSTITYVMKNVAFIGMATPMILGMSLADAWR*VL 239
           +KW       L        SR    Q    TY+  NVA      P+ L + +ADA+R VL
Sbjct: 543 YKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVL 602

Query: 238 SCSKADPVTMLPKNTLKNKN 179
              K DP       TL + N
Sbjct: 603 LDEKIDPALAAEILTLPSVN 622

>ATPI_EUGGR (P30391) Chloroplast ATP synthase a chain precursor (EC 3.6.3.14)|
           (ATPase subunit IV)
          Length = 251

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
 Frame = +3

Query: 42  IQGFLPGLALKIFLIVLPTILMFM---SQFEGLISQSSLERRTASKY-------FIFLFF 191
           I GFL     K   +V     +F+   ++F   IS++ +  +  SK+       F+F+F 
Sbjct: 52  IIGFLSIYTTKNLTLVPANKQIFIELVTEFITDISKTQIGEKEYSKWVPYIGTMFLFIFV 111

Query: 192 NVFLGSIVTGSALEQLNTYLHASANDIPRIIGVAIPMKATFFITYVMVDGWT 347
           + + G+++    +E  N  L A  NDI    G+AI     +F   +   G T
Sbjct: 112 SNWSGALIPWKIIELPNGELGAPTNDINTTAGLAILTSLAYFYAGLNKKGLT 163

>TRPC_BACTN (Q8AAD6) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 260

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -1

Query: 553 SIKGSKSGVTAAYTRPSKKYSCIRGSDQ*KQILPGSIASSLS-FSVLTKKKFF 398
           ++  S SG+ A + R S     I+   + ++I+P  +A+  S  S+LT +KFF
Sbjct: 44  ALASSDSGIIAEFKRRSPSKGWIKQEARPEEIVPSYLAAGASALSILTDEKFF 96

>SIM2_HUMAN (Q14190) Single-minded homolog 2|
          Length = 667

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
 Frame = -1

Query: 427 FSVLTKKKFFKWYSTNALILSISRAT-PVQPSTITYVMKNVAF--IGMATPMILGMSLAD 257
           + +L+K+  + W  + A ++  SR++ P    ++ YV+  + +  + ++   +      D
Sbjct: 295 YRLLSKRGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTEIEYKELQLSLEQVSTAKSQD 354

Query: 256 AWR*VLSCSKADPVTMLPKNT 194
           +WR  LS S+     + PKNT
Sbjct: 355 SWRTALSTSQETRKLVKPKNT 375

>NU1C_SYNY3 (P26522) NAD(P)H-quinone oxidoreductase chain 1 (EC 1.6.5.-)|
           (NAD(P)H dehydrogenase I, chain 1) (NDH-1, chain 1)
          Length = 372

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
 Frame = +3

Query: 24  DTIKSFIQ-----GFLPGLALKIFLIVLPTILMFMSQFEGLISQSSLERRTAS 167
           D   SF+Q     G  PGLA K+F I LP+ILM +    G++    LER+ ++
Sbjct: 6   DLQNSFLQSLQGFGLPPGLA-KLFWIPLPSILMIIGATVGVLVVVWLERKISA 57

>PCDH7_HUMAN (O60245) Protocadherin-7 precursor (Brain-heart protocadherin)|
           (BH-Pcdh)
          Length = 1069

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
 Frame = -1

Query: 220 PVTMLPKN---TL--KNKNIKYLDAVLRSSDDCDINPSNCDMNISIVGSTMRKIFRASP 59
           P   LPKN   TL   + N++ + A + ++D  D    N D+N SIVG    K+F   P
Sbjct: 740 PTVTLPKNISYTLLPPSSNVRTVVATVLATDSDD--GINADLNYSIVGGNPFKLFEIDP 796

>NU1M_CAEEL (P24887) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 291

 Score = 26.9 bits (58), Expect(2) = 9.5
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 99  ILMFMSQFEGLISQSSLERRTASKYFIFLFFNVF 200
           +L+F+S++  LI  S L      K+ IF+ F++F
Sbjct: 215 VLLFLSEYGSLIFFSVLSSAMFFKFSIFMAFSIF 248



 Score = 20.8 bits (42), Expect(2) = 9.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 211 LLQDLLWSSLIPTSMRQLMTY 273
           L+  L W  L+P S+  L  Y
Sbjct: 265 LMMSLFWFKLLPISLIMLCFY 285


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,837,358
Number of Sequences: 219361
Number of extensions: 1795160
Number of successful extensions: 5359
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5354
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5424720305
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)