ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62l14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_476028.1| Oryza sativa (japonica cultivar-group), predic... 480 e-132
2dbj|AK073648.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
3dbj|AK067992.1| Oryza sativa (japonica cultivar-group) cDNA clon... 480 e-132
4gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome... 248 2e-62
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 248 2e-62
6dbj|AK103608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
7gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome... 210 4e-51
8ref|NM_193232.1| Oryza sativa (japonica cultivar-group), predic... 141 3e-30
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
10dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
11dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
12gb|BT013808.1| Lycopersicon esculentum clone 132729F, mRNA sequence 84 6e-13
13ref|NM_197907.1| Oryza sativa (japonica cultivar-group) unknown ... 66 1e-07
14gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 66 1e-07
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
16dbj|AK102587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
18ref|NM_116524.1| Arabidopsis thaliana unknown protein AT4G02900 ... 58 4e-05
19gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV,... 58 4e-05
20gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, nea... 58 4e-05
21gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
22emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, c... 58 4e-05
23dbj|AK069074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
24ref|NM_113057.1| Arabidopsis thaliana unknown protein AT3G21620 ... 50 0.009
25gb|AY372423.1| Medicago truncatula B gene, partial sequence 50 0.009
26emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6... 50 0.009
27dbj|AK220939.1| Arabidopsis thaliana mRNA for hypothetical prote... 50 0.009
28dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 50 0.009
29dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone... 50 0.009
30emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chr... 44 0.53
31emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chr... 44 0.53
32dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.53
33gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosom... 42 2.1
34gb|AC079033.12| Homo sapiens 12 BAC RP11-453L7 (Roswell Park Can... 42 2.1
35emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chro... 42 2.1
36emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chr... 42 2.1
37gb|M63194.1|PUULRNA Puumala virus CG1820 RNA-dependent RNA polym... 42 2.1
38ref|NM_178965.1| Arabidopsis thaliana unknown protein AT4G04340 ... 40 8.3
39ref|NM_116672.2| Arabidopsis thaliana unknown protein AT4G04340 ... 40 8.3
40ref|NM_178966.1| Arabidopsis thaliana unknown protein AT4G04340 ... 40 8.3
41gb|AF069441.1| Arabidopsis thaliana BAC T19B17 from chromosome I... 40 8.3
42gb|AC127607.5| Rattus norvegicus BAC CH230-41K5 (Children's Hos... 40 8.3
43gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-... 40 8.3
44gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, co... 40 8.3
45emb|CR932227.1|CNS0KYIH Ribonuclease with two RNaseIII domains, ... 40 8.3
46emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on ch... 40 8.3
47gb|AY056305.1| Arabidopsis thaliana unknown protein (At4g04340) ... 40 8.3
48gb|AC118273.4| Homo sapiens chromosome 11, clone RP11-107P7, com... 40 8.3
49emb|AL161500.2|ATCHRIV12 Arabidopsis thaliana DNA chromosome 4, ... 40 8.3
50emb|AJ314898.1|HSA314898 Homo sapiens partial OBSCN gene for obs... 40 8.3
51gb|AC117746.6| Homo sapiens chromosome 11, clone RP11-159C12, co... 40 8.3
52gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, comp... 40 8.3
53gb|AY093209.1| Arabidopsis thaliana unknown protein (At4g04340) ... 40 8.3
54gb|AC084851.2| Homo sapiens chromosome 11, clone CTD-2132H18, co... 40 8.3
55gb|AC148699.1| Macaca mulatta Major Histocompatibility Complex B... 40 8.3
56emb|AL114761.1|CNS01BW1 Botrytis cinerea strain T4 cDNA library 40 8.3
57gb|AC154315.2| Mus musculus BAC clone RP23-348I6 from chromosome... 40 8.3
58gb|AC084633.1|CBRG45G04 Caenorhabditis briggsae cosmid G45G04, c... 40 8.3
59emb|AJ249082.2|PPL249082 Pleuronectes platessa UGT1 gene for UDP... 40 8.3
60emb|AJ249081.1|PPL249081 Pleuronectes platessa mRNA for UDP-gluc... 40 8.3
61gb|AC021867.19| Homo sapiens 3 BAC RP11-220G20 (Roswell Park Can... 40 8.3
62dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.3
63dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.3
64dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
65dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.3
66dbj|AK113957.1| Ciona intestinalis cDNA, clone:cicl018l06, full ... 40 8.3
67emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 8.3
68gb|DQ146749.1| Uncultured archaeon clone oBS65f.93 16S ribosomal... 40 8.3
69emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chr... 40 8.3

>ref|XM_476028.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2301

 Score =  480 bits (242), Expect = e-132
 Identities = 494/578 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
            ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 1252 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 1311

                                                                        
Query: 93   ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
            ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 1312 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 1371

                                                                        
Query: 153  cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
            |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 1372 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 1431

                                                                        
Query: 213  gttacaggatctgctttggagcagcttaatacctacctccatgcgtcagctaatgacata 272
            ||||||||||||||||| || ||||||||  | ||| | |||  ||| || ||||| |||
Sbjct: 1432 gttacaggatctgctttagatcagcttaaggcatacattcatcagtcggcaaatgaaata 1491

                                                                        
Query: 273  ccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgtaatg 332
            || || | ||| ||||||||||| ||||||| ||| || |||||||||||||| ||||||
Sbjct: 1492 ccgagaaccatcggtgtagccattccaatgagggcgacttttttcataacatatgtaatg 1551

                                                                        
Query: 333  gtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtactatac 392
            || || ||||||||||||||||||  ||||||| ||||| | |||||| || || | | |
Sbjct: 1552 gttgacggttggactggtgtagctggtgaaatattgagattgagggcacttataatcttc 1611

                                                                        
Query: 393  cacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggatccg 452
            || |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| 
Sbjct: 1612 catttgaaaaactttttcttggtgaagactgaaaaggacagagaagaggcaatggatcct 1671

                                                                        
Query: 453  ggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggtctt 512
            || |||||||||||| | |||| ||| || || ||||||||||||||||| ||||| |||
Sbjct: 1672 ggtagtatctgttttgattggtgtgaaccacgtatacagctatatttcttacttggcctt 1731

                                                                        
Query: 513  gtgtatgctgcagtgacaccgctcttgctaccttttatactggtgttctttgcgttggga 572
            || |||||||  ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| |
Sbjct: 1732 gtctatgctgtggtgacaccgttattgcttcctttcatattggtattcttcgggctggca 1791

                                                  
Query: 573  tacgttgtctaccgccatcagatcattaatgtctacaa 610
            || |||||||||||||| ||||| || |||||||||||
Sbjct: 1792 tatgttgtctaccgccaccagataataaatgtctacaa 1829



to top

>dbj|AK073648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M19, full
            insert sequence
          Length = 2681

 Score =  480 bits (242), Expect = e-132
 Identities = 494/578 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
            ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 1429 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 1488

                                                                        
Query: 93   ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
            ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 1489 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 1548

                                                                        
Query: 153  cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
            |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 1549 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 1608

                                                                        
Query: 213  gttacaggatctgctttggagcagcttaatacctacctccatgcgtcagctaatgacata 272
            ||||||||||||||||| || ||||||||  | ||| | |||  ||| || ||||| |||
Sbjct: 1609 gttacaggatctgctttagatcagcttaaggcatacattcatcagtcggcaaatgaaata 1668

                                                                        
Query: 273  ccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgtaatg 332
            || || | ||| ||||||||||| ||||||| ||| || |||||||||||||| ||||||
Sbjct: 1669 ccgagaaccatcggtgtagccattccaatgagggcgacttttttcataacatatgtaatg 1728

                                                                        
Query: 333  gtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtactatac 392
            || || ||||||||||||||||||  ||||||| ||||| | |||||| || || | | |
Sbjct: 1729 gttgacggttggactggtgtagctggtgaaatattgagattgagggcacttataatcttc 1788

                                                                        
Query: 393  cacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggatccg 452
            || |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| 
Sbjct: 1789 catttgaaaaactttttcttggtgaagactgaaaaggacagagaagaggcaatggatcct 1848

                                                                        
Query: 453  ggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggtctt 512
            || |||||||||||| | |||| ||| || || ||||||||||||||||| ||||| |||
Sbjct: 1849 ggtagtatctgttttgattggtgtgaaccacgtatacagctatatttcttacttggcctt 1908

                                                                        
Query: 513  gtgtatgctgcagtgacaccgctcttgctaccttttatactggtgttctttgcgttggga 572
            || |||||||  ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| |
Sbjct: 1909 gtctatgctgtggtgacaccgttattgcttcctttcatattggtattcttcgggctggca 1968

                                                  
Query: 573  tacgttgtctaccgccatcagatcattaatgtctacaa 610
            || |||||||||||||| ||||| || |||||||||||
Sbjct: 1969 tatgttgtctaccgccaccagataataaatgtctacaa 2006



to top

>dbj|AK067992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122B14, full
            insert sequence
          Length = 2850

 Score =  480 bits (242), Expect = e-132
 Identities = 494/578 (85%)
 Strand = Plus / Plus

                                                                        
Query: 33   aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
            ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 1484 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 1543

                                                                        
Query: 93   ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
            ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 1544 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 1603

                                                                        
Query: 153  cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
            |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 1604 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 1663

                                                                        
Query: 213  gttacaggatctgctttggagcagcttaatacctacctccatgcgtcagctaatgacata 272
            ||||||||||||||||| || ||||||||  | ||| | |||  ||| || ||||| |||
Sbjct: 1664 gttacaggatctgctttagatcagcttaaggcatacattcatcagtcggcaaatgaaata 1723

                                                                        
Query: 273  ccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgtaatg 332
            || || | ||| ||||||||||| ||||||| ||| || |||||||||||||| ||||||
Sbjct: 1724 ccgagaaccatcggtgtagccattccaatgagggcgacttttttcataacatatgtaatg 1783

                                                                        
Query: 333  gtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtactatac 392
            || || ||||||||||||||||||  ||||||| ||||| | |||||| || || | | |
Sbjct: 1784 gttgacggttggactggtgtagctggtgaaatattgagattgagggcacttataatcttc 1843

                                                                        
Query: 393  cacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggatccg 452
            || |||||||||||||||||||| ||||| || |||||||||||||||||||||||||| 
Sbjct: 1844 catttgaaaaactttttcttggtgaagactgaaaaggacagagaagaggcaatggatcct 1903

                                                                        
Query: 453  ggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggtctt 512
            || |||||||||||| | |||| ||| || || ||||||||||||||||| ||||| |||
Sbjct: 1904 ggtagtatctgttttgattggtgtgaaccacgtatacagctatatttcttacttggcctt 1963

                                                                        
Query: 513  gtgtatgctgcagtgacaccgctcttgctaccttttatactggtgttctttgcgttggga 572
            || |||||||  ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| |
Sbjct: 1964 gtctatgctgtggtgacaccgttattgcttcctttcatattggtattcttcgggctggca 2023

                                                  
Query: 573  tacgttgtctaccgccatcagatcattaatgtctacaa 610
            || |||||||||||||| ||||| || |||||||||||
Sbjct: 2024 tatgttgtctaccgccaccagataataaatgtctacaa 2061



to top

>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0030I14, complete sequence
          Length = 159035

 Score =  248 bits (125), Expect = 2e-62
 Identities = 260/305 (85%)
 Strand = Plus / Plus

                                                                         
Query: 285   ggtgtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttgg 344
             ||||||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||
Sbjct: 42236 ggtgtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttgg 42295

                                                                         
Query: 345   actggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaac 404
             ||||||||||||  ||||||| ||||| | |||||| || || | | ||| |||||||||
Sbjct: 42296 actggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaac 42355

                                                                         
Query: 405   tttttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgt 464
             ||||||||||| ||||| || |||||||||||||||||||||||||| || |||||||||
Sbjct: 42356 tttttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgt 42415

                                                                         
Query: 465   ttttactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgca 524
             ||| | |||| ||| || || ||||||||||||||||| ||||| ||||| |||||||  
Sbjct: 42416 tttgattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtg 42475

                                                                         
Query: 525   gtgacaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctac 584
             ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||
Sbjct: 42476 gtgacaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctac 42535

                  
Query: 585   cgcca 589
             |||||
Sbjct: 42536 cgcca 42540



 Score =  240 bits (121), Expect = 4e-60
 Identities = 187/209 (89%)
 Strand = Plus / Plus

                                                                         
Query: 33    aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
             ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 41104 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 41163

                                                                         
Query: 93    ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
             ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 41164 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 41223

                                                                         
Query: 153   cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
             |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 41224 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 41283

                                          
Query: 213   gttacaggatctgctttggagcagcttaa 241
             ||||||||||||||||| || ||||||||
Sbjct: 41284 gttacaggatctgctttagatcagcttaa 41312



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  248 bits (125), Expect = 2e-62
 Identities = 260/305 (85%)
 Strand = Plus / Plus

                                                                            
Query: 285      ggtgtagccataccaatgaaggcaacatttttcataacatacgtaatggtcgatggttgg 344
                ||||||||||| ||||||| ||| || |||||||||||||| |||||||| || ||||||
Sbjct: 29394211 ggtgtagccattccaatgagggcgacttttttcataacatatgtaatggttgacggttgg 29394270

                                                                            
Query: 345      actggtgtagctcttgaaatactgagaataagggcatttgtactataccacttgaaaaac 404
                ||||||||||||  ||||||| ||||| | |||||| || || | | ||| |||||||||
Sbjct: 29394271 actggtgtagctggtgaaatattgagattgagggcacttataatcttccatttgaaaaac 29394330

                                                                            
Query: 405      tttttcttggtcaagacggagaaggacagagaagaggcaatggatccgggcagtatctgt 464
                ||||||||||| ||||| || |||||||||||||||||||||||||| || |||||||||
Sbjct: 29394331 tttttcttggtgaagactgaaaaggacagagaagaggcaatggatcctggtagtatctgt 29394390

                                                                            
Query: 465      ttttactggtctgagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgca 524
                ||| | |||| ||| || || ||||||||||||||||| ||||| ||||| |||||||  
Sbjct: 29394391 tttgattggtgtgaaccacgtatacagctatatttcttacttggccttgtctatgctgtg 29394450

                                                                            
Query: 525      gtgacaccgctcttgctaccttttatactggtgttctttgcgttgggatacgttgtctac 584
                ||||||||| | ||||| ||||| ||| |||| ||||| | | ||| ||| |||||||||
Sbjct: 29394451 gtgacaccgttattgcttcctttcatattggtattcttcgggctggcatatgttgtctac 29394510

                     
Query: 585      cgcca 589
                |||||
Sbjct: 29394511 cgcca 29394515



 Score =  240 bits (121), Expect = 4e-60
 Identities = 187/209 (89%)
 Strand = Plus / Plus

                                                                            
Query: 33       aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
                ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 29393079 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 29393138

                                                                            
Query: 93       ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
                ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 29393139 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 29393198

                                                                            
Query: 153      cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
                |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 29393199 cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 29393258

                                             
Query: 213      gttacaggatctgctttggagcagcttaa 241
                ||||||||||||||||| || ||||||||
Sbjct: 29393259 gttacaggatctgctttagatcagcttaa 29393287



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 300      atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 352
                ||||| |||||||||||||| ||||| |||||||| ||||| ||| |||||||
Sbjct: 19020732 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 19020784



to top

>dbj|AK103608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133I03, full
            insert sequence
          Length = 2859

 Score =  212 bits (107), Expect = 1e-51
 Identities = 404/503 (80%)
 Strand = Plus / Plus

                                                                        
Query: 30   attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 89
            |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct: 1665 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 1724

                                                                        
Query: 90   cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 149
            || || |  ||| | ||||| |||||  |  |||||||||||| |||   ||| ||||| 
Sbjct: 1725 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 1784

                                                                        
Query: 150  gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 209
            ||| | ||| |||| |  ||||| | ||| ||||||||||| |||||||| ||||| |||
Sbjct: 1785 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 1844

                                                                        
Query: 210  attgttacaggatctgctttggagcagcttaatacctacctccatgcgtcagctaatgac 269
            ||| || ||||||||||||| |||||||| || || |  || ||    ||||| ||||| 
Sbjct: 1845 attattgcaggatctgctttagagcagctcaaaacatttcttcaccaatcagcaaatgaa 1904

                                                                        
Query: 270  ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
            ||||||||||  ||||||| ||| || |||||||| ||||| ||||| |||||||| |||
Sbjct: 1905 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 1964

                                                                        
Query: 330  atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 389
            ||||| ||||||||| |||| ||||||  ||||||  | ||| | |   ||||  || | 
Sbjct: 1965 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 2024

                                                                        
Query: 390  taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
            | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2025 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 2084

                                                                        
Query: 450  ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 509
            || || || ||  ||||| |||    |||||||| ||||||||| ||||||||||| || 
Sbjct: 2085 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 2144

                                   
Query: 510  cttgtgtatgctgcagtgacacc 532
            ||||| |||||||  ||||||||
Sbjct: 2145 cttgtctatgctgtggtgacacc 2167



to top

>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
           complete sequence
          Length = 45160

 Score =  210 bits (106), Expect = 4e-51
 Identities = 166/186 (89%)
 Strand = Plus / Minus

                                                                       
Query: 33  aaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgctt 92
           ||||||||||||||||| |||||||| ||| ||||| ||||| ||||||| ||| |||||
Sbjct: 186 aaatcattcatccaaggttttcttccaggaattgctttgaaggtcttccttatattgctt 127

                                                                       
Query: 93  ccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcactagag 152
           ||||||||||||||||| |||||  ||||||||||||| ||||||||||||||||| |||
Sbjct: 126 ccaactatactgatgtttatgtctaagtttgaaggattaatatcacagtcatcactggag 67

                                                                       
Query: 153 cgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagcatt 212
           |||||| |||| || || |||| ||| |||||||||||||||||||||||||| ||||| 
Sbjct: 66  cgaagatctgcatctaaatattatatcttcttgttcttcaatgtatttttgggaagcatc 7

                 
Query: 213 gttaca 218
           ||||||
Sbjct: 6   gttaca 1



to top

>ref|NM_193232.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1941

 Score =  141 bits (71), Expect = 3e-30
 Identities = 215/263 (81%)
 Strand = Plus / Plus

                                                                        
Query: 270  ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
            ||||||||||  ||||||| ||| || |||||||| ||||| ||||| |||||||| |||
Sbjct: 1123 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 1182

                                                                        
Query: 330  atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 389
            ||||| ||||||||| |||| ||||||  ||||||  | ||| | |   ||||  || | 
Sbjct: 1183 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 1242

                                                                        
Query: 390  taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
            | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 1243 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 1302

                                                                        
Query: 450  ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 509
            || || || ||  ||||| |||    |||||||| ||||||||| ||||||||||| || 
Sbjct: 1303 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 1362

                                   
Query: 510  cttgtgtatgctgcagtgacacc 532
            ||||| |||||||  ||||||||
Sbjct: 1363 cttgtctatgctgtggtgacacc 1385



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  141 bits (71), Expect = 3e-30
 Identities = 215/263 (81%)
 Strand = Plus / Minus

                                                                            
Query: 270      ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
                ||||||||||  ||||||| ||| || |||||||| ||||| ||||| |||||||| |||
Sbjct: 19393797 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 19393738

                                                                            
Query: 330      atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 389
                ||||| ||||||||| |||| ||||||  ||||||  | ||| | |   ||||  || | 
Sbjct: 19393737 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 19393678

                                                                            
Query: 390      taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
                | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 19393677 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 19393618

                                                                            
Query: 450      ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 509
                || || || ||  ||||| |||    |||||||| ||||||||| ||||||||||| || 
Sbjct: 19393617 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 19393558

                                       
Query: 510      cttgtgtatgctgcagtgacacc 532
                ||||| |||||||  ||||||||
Sbjct: 19393557 cttgtctatgctgtggtgacacc 19393535



 Score =  105 bits (53), Expect = 2e-19
 Identities = 170/209 (81%)
 Strand = Plus / Minus

                                                                            
Query: 30       attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 89
                |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct: 19394750 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 19394691

                                                                            
Query: 90       cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 149
                || || |  ||| | ||||| |||||  |  |||||||||||| |||   ||| ||||| 
Sbjct: 19394690 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 19394631

                                                                            
Query: 150      gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 209
                ||| | ||| |||| |  ||||| | ||| ||||||||||| |||||||| ||||| |||
Sbjct: 19394630 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 19394571

                                             
Query: 210      attgttacaggatctgctttggagcagct 238
                ||| || ||||||||||||| ||||||||
Sbjct: 19394570 attattgcaggatctgctttagagcagct 19394542



to top

>dbj|AP003449.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OSJNBa0086A10
          Length = 151071

 Score =  141 bits (71), Expect = 3e-30
 Identities = 215/263 (81%)
 Strand = Plus / Minus

                                                                        
Query: 270  ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
            ||||||||||  ||||||| ||| || |||||||| ||||| ||||| |||||||| |||
Sbjct: 2613 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 2554

                                                                        
Query: 330  atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 389
            ||||| ||||||||| |||| ||||||  ||||||  | ||| | |   ||||  || | 
Sbjct: 2553 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 2494

                                                                        
Query: 390  taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
            | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2493 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 2434

                                                                        
Query: 450  ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 509
            || || || ||  ||||| |||    |||||||| ||||||||| ||||||||||| || 
Sbjct: 2433 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 2374

                                   
Query: 510  cttgtgtatgctgcagtgacacc 532
            ||||| |||||||  ||||||||
Sbjct: 2373 cttgtctatgctgtggtgacacc 2351



 Score =  105 bits (53), Expect = 2e-19
 Identities = 170/209 (81%)
 Strand = Plus / Minus

                                                                        
Query: 30   attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 89
            |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct: 3566 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 3507

                                                                        
Query: 90   cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 149
            || || |  ||| | ||||| |||||  |  |||||||||||| |||   ||| ||||| 
Sbjct: 3506 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 3447

                                                                        
Query: 150  gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 209
            ||| | ||| |||| |  ||||| | ||| ||||||||||| |||||||| ||||| |||
Sbjct: 3446 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 3387

                                         
Query: 210  attgttacaggatctgctttggagcagct 238
            ||| || ||||||||||||| ||||||||
Sbjct: 3386 attattgcaggatctgctttagagcagct 3358



to top

>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1029_F04
          Length = 141834

 Score =  141 bits (71), Expect = 3e-30
 Identities = 215/263 (81%)
 Strand = Plus / Minus

                                                                          
Query: 270    ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
              ||||||||||  ||||||| ||| || |||||||| ||||| ||||| |||||||| |||
Sbjct: 121802 ataccaaggacaattggtgaagcaattccaatgaaagcaaccttttttataacatatgta 121743

                                                                          
Query: 330    atggtcgatggttggactggtgtagctcttgaaatactgagaataagggcatttgtacta 389
              ||||| ||||||||| |||| ||||||  ||||||  | ||| | |   ||||  || | 
Sbjct: 121742 atggttgatggttgggctggggtagctggtgaaattttaagattgaaaccattgataatc 121683

                                                                          
Query: 390    taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
              | |||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| 
Sbjct: 121682 ttccacttgaaaaactttttcttggtcaagactgagaaagacagagaagaagcaatggac 121623

                                                                          
Query: 450    ccgggcagtatctgtttttactggtctgagcctcgaatacagctatatttcttgcttggt 509
              || || || ||  ||||| |||    |||||||| ||||||||| ||||||||||| || 
Sbjct: 121622 cctggaagcattggttttgactcaaatgagcctcaaatacagctctatttcttgctcgga 121563

                                     
Query: 510    cttgtgtatgctgcagtgacacc 532
              ||||| |||||||  ||||||||
Sbjct: 121562 cttgtctatgctgtggtgacacc 121540



 Score =  105 bits (53), Expect = 2e-19
 Identities = 170/209 (81%)
 Strand = Plus / Minus

                                                                          
Query: 30     attaaatcattcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtg 89
              |||||||||||||||||||| ||||| || ||| ||||||||||||| ||||| ||| ||
Sbjct: 122755 attaaatcattcatccaaggatttctgccaggaattgctctgaagattttccttatattg 122696

                                                                          
Query: 90     cttccaactatactgatgttcatgtcacagtttgaaggattgatatcacagtcatcacta 149
              || || |  ||| | ||||| |||||  |  |||||||||||| |||   ||| ||||| 
Sbjct: 122695 ctccctagcatattaatgtttatgtctaaagttgaaggattgacatcggtgtcctcactg 122636

                                                                          
Query: 150    gagcgaagaactgcgtccaagtattttatattcttgttcttcaatgtatttttggggagc 209
              ||| | ||| |||| |  ||||| | ||| ||||||||||| |||||||| ||||| |||
Sbjct: 122635 gagaggagatctgcttttaagtactatatcttcttgttctttaatgtattcttgggaagc 122576

                                           
Query: 210    attgttacaggatctgctttggagcagct 238
              ||| || ||||||||||||| ||||||||
Sbjct: 122575 attattgcaggatctgctttagagcagct 122547



to top

>gb|BT013808.1| Lycopersicon esculentum clone 132729F, mRNA sequence
          Length = 2674

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                        
Query: 390  taccacttgaaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggat 449
            ||||||||||| |||||||||||||| |||||||| || || ||||||||||||||||||
Sbjct: 1666 taccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggat 1725

              
Query: 450  cc 451
            ||
Sbjct: 1726 cc 1727



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                        
Query: 39   ttcatccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaact 98
            ||||||||||| ||||| |||||  ||||| |||||||||| |||||| | || ||||||
Sbjct: 1315 ttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaact 1374

                     
Query: 99   atactgatg 107
            ||| |||||
Sbjct: 1375 atattgatg 1383



to top

>ref|NM_197907.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0056G17.14), mRNA
          Length = 2585

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 270  ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
            |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| ||
Sbjct: 1486 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 1545

                 
Query: 330  atggt 334
            |||||
Sbjct: 1546 atggt 1550



to top

>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete
             sequence
          Length = 139999

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 270   ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
             |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| ||
Sbjct: 23779 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 23720

                  
Query: 330   atggt 334
             |||||
Sbjct: 23719 atggt 23715



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 270      ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
                |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| ||
Sbjct: 22569110 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 22569051

                     
Query: 330      atggt 334
                |||||
Sbjct: 22569050 atggt 22569046



to top

>dbj|AK102587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098F01, full
            insert sequence
          Length = 2714

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 270  ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
            |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| ||
Sbjct: 1615 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 1674

                 
Query: 330  atggt 334
            |||||
Sbjct: 1675 atggt 1679



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 270      ataccaaggatcattggtgtagccataccaatgaaggcaacatttttcataacatacgta 329
                |||||||||| |||||| ||||| ||||||||||| || |||||||| || |||||| ||
Sbjct: 22581578 ataccaaggaccattggagtagctataccaatgaaagctacattttttatgacatacata 22581519

                     
Query: 330      atggt 334
                |||||
Sbjct: 22581518 atggt 22581514



to top

>ref|NM_116524.1| Arabidopsis thaliana unknown protein AT4G02900 mRNA, complete cds
          Length = 2358

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 297  ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 349
            ||||||||||| ||||||||||| |||||  | ||||||||||||||| ||||
Sbjct: 1519 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 1571



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                        
Query: 42   atccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactata 101
            ||||||||||||||||| ||| | ||  | ||||| || |||||  | ||||||||||| 
Sbjct: 1264 atccaagggtttcttccaggaatagcgttaaagatttttctcatcatacttccaactatt 1323

                                        
Query: 102  ctgatgttcatgtcacagtttgaaggat 129
            ||||||   ||||||||  |||||||||
Sbjct: 1324 ctgatgacaatgtcacaaattgaaggat 1351



to top

>gb|AC004044.1| Arabidopsis thaliana BAC T5J8 from chromosome IV, top arm, complete
             sequence
          Length = 98527

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 297   ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 349
             ||||||||||| ||||||||||| |||||  | ||||||||||||||| ||||
Sbjct: 83736 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 83788



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                         
Query: 42    atccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactata 101
             ||||||||||||||||| ||| | ||  | ||||| || |||||  | ||||||||||| 
Sbjct: 83402 atccaagggtttcttccaggaatagcgttaaagatttttctcatcatacttccaactatt 83461

                                         
Query: 102   ctgatgttcatgtcacagtttgaaggat 129
             ||||||   ||||||||  |||||||||
Sbjct: 83462 ctgatgacaatgtcacaaattgaaggat 83489



to top

>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete
             sequence
          Length = 98913

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 297   ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 349
             ||||||||||| ||||||||||| |||||  | ||||||||||||||| ||||
Sbjct: 96695 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 96643



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 71/88 (80%)
 Strand = Plus / Minus

                                                                         
Query: 42    atccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactata 101
             ||||||||||||||||| ||| | ||  | ||||| || |||||  | ||||||||||| 
Sbjct: 97029 atccaagggtttcttccaggaatagcgttaaagatttttctcatcatacttccaactatt 96970

                                         
Query: 102   ctgatgttcatgtcacagtttgaaggat 129
             ||||||   ||||||||  |||||||||
Sbjct: 96969 ctgatgacaatgtcacaaattgaaggat 96942



to top

>gb|AC132483.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0014C03, complete sequence
          Length = 143739

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 300   atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 352
             ||||| |||||||||||||| ||||| |||||||| ||||| ||| |||||||
Sbjct: 33375 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 33427



to top

>emb|AL161495.2|ATCHRIV7 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 7
          Length = 199615

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 297    ccaatgaaggcaacatttttcataacatacgtaatggtcgatggttggactgg 349
              ||||||||||| ||||||||||| |||||  | ||||||||||||||| ||||
Sbjct: 132406 ccaatgaaggccacatttttcatcacatatatcatggtcgatggttgggctgg 132458



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                          
Query: 42     atccaagggtttcttcctggacttgctctgaagatcttcctcatagtgcttccaactata 101
              ||||||||||||||||| ||| | ||  | ||||| || |||||  | ||||||||||| 
Sbjct: 132072 atccaagggtttcttccaggaatagcgttaaagatttttctcatcatacttccaactatt 132131

                                          
Query: 102    ctgatgttcatgtcacagtttgaaggat 129
              ||||||   ||||||||  |||||||||
Sbjct: 132132 ctgatgacaatgtcacaaattgaaggat 132159



to top

>dbj|AK069074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023005F15, full
            insert sequence
          Length = 2704

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 300  atgaaggcaacatttttcataacatacgtaatggtcgatggttggactggtgt 352
            ||||| |||||||||||||| ||||| |||||||| ||||| ||| |||||||
Sbjct: 1826 atgaaagcaacatttttcatcacatatgtaatggttgatggctgggctggtgt 1878



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 591  cagatcattaatgtctacaa 610
            ||||||||||||||||||||
Sbjct: 2117 cagatcattaatgtctacaa 2136



to top

>ref|NM_113057.1| Arabidopsis thaliana unknown protein AT3G21620 mRNA, complete cds
          Length = 2271

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 423  gagaaggacagagaagaggcaatggatcc 451
            ||||||||||||||||| |||||||||||
Sbjct: 1645 gagaaggacagagaagaagcaatggatcc 1673



to top

>gb|AY372423.1| Medicago truncatula B gene, partial sequence
          Length = 6574

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 480  cctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||| |||||| || |||||||||||||| ||||||||| ||| ||| |||||
Sbjct: 2456 cctcaaatacaactttatttcttgcttggccttgtgtattctgtagtcacacc 2508



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 297  ccaatgaaggcaacatttttcataacatacgtaatggtcgatgg 340
            |||||||| ||||| || |||||||||||| ||||||| |||||
Sbjct: 2273 ccaatgaaagcaactttcttcataacatacataatggttgatgg 2316



to top

>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 480   cctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
             |||| |||||| || |||||||||||||| ||||||||| ||| ||| |||||
Sbjct: 40786 cctcaaatacaactttatttcttgcttggccttgtgtattctgtagtcacacc 40734



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 297   ccaatgaaggcaacatttttcataacatacgtaatggtcgatgg 340
             |||||||| ||||| || |||||||||||| ||||||| |||||
Sbjct: 40969 ccaatgaaagcaactttcttcataacatacataatggttgatgg 40926



to top

>dbj|AK220939.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL22-52-J03
          Length = 2555

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 423  gagaaggacagagaagaggcaatggatcc 451
            ||||||||||||||||| |||||||||||
Sbjct: 1832 gagaaggacagagaagaagcaatggatcc 1860



to top

>dbj|AB019232.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIL23
          Length = 80818

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 423   gagaaggacagagaagaggcaatggatcc 451
             ||||||||||||||||| |||||||||||
Sbjct: 49525 gagaaggacagagaagaagcaatggatcc 49497



to top

>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 399   aaaaactttttcttggtcaagacggagaaggacagagaagaggcaatggatcc 451
             |||||||| |||||||| ||||| || |||||| | ||||| |||||||||||
Sbjct: 46693 aaaaacttcttcttggtgaagactgaaaaggaccgcgaagaagcaatggatcc 46745



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 480   cctcgaatacagctatatttcttgcttggtcttgtgtatgc 520
             |||| |||||| || |||||||||||||| ||||| |||||
Sbjct: 46774 cctcaaatacaactttatttcttgcttggccttgtatatgc 46814



to top

>emb|AL391277.16| Human DNA sequence from clone RP11-357C3 on chromosome X, complete
             sequence
          Length = 194456

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 342   tggactggtgtagctcttgaaatactgaga 371
             |||||||| ||||||| |||||||||||||
Sbjct: 40419 tggactggagtagctcatgaaatactgaga 40448



to top

>emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chromosome 11 Contains the
             Trpv3 gene for transient receptor potential cation channel
             subfamily V member 3, the Aspa gene for aspartoacylase
             (aminoacylase) 2, a novel gene, the genes for olfactory
             receptor MOR135-11, 12, 13, 2, 1, three olfactory receptor
             MOR135 pseudogenes and a CpG island, complete sequence
          Length = 208137

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 131   gatatcacagtcatcactagag 152
             ||||||||||||||||||||||
Sbjct: 38059 gatatcacagtcatcactagag 38080



to top

>dbj|AP004488.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02F05, TM0020,
             complete sequence
          Length = 80920

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 61/74 (82%)
 Strand = Plus / Plus

                                                                         
Query: 492   ctatatttcttgcttggtcttgtgtatgctgcagtgacaccgctcttgctaccttttata 551
             ||||||||| | |||||  ||||||||||||  ||||| ||| || | || ||||| |||
Sbjct: 33862 ctatatttccttcttggaattgtgtatgctgtggtgactccgatccttctgcctttcata 33921

                           
Query: 552   ctggtgttctttgc 565
             ||||| ||||||||
Sbjct: 33922 ctggtcttctttgc 33935



to top

>gb|AC154644.2| Mus musculus BAC clone RP23-278G20 from chromosome 14, complete
             sequence
          Length = 175685

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    ttgctctgaagatcttcctca 84
             |||||||||||||||||||||
Sbjct: 23740 ttgctctgaagatcttcctca 23760



to top

>gb|AC079033.12| Homo sapiens 12 BAC RP11-453L7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 150123

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    aaaactttttcttggtcaaga 420
              |||||||||||||||||||||
Sbjct: 141332 aaaactttttcttggtcaaga 141312



to top

>emb|CT025694.11| Mouse DNA sequence from clone RP24-66N5 on chromosome 14, complete
             sequence
          Length = 203022

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 64    ttgctctgaagatcttcctca 84
             |||||||||||||||||||||
Sbjct: 39534 ttgctctgaagatcttcctca 39554



to top

>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete
              sequence
          Length = 205838

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    cggagaaggacagagaagagg 441
              |||||||||||||||||||||
Sbjct: 198832 cggagaaggacagagaagagg 198812



to top

>gb|M63194.1|PUULRNA Puumala virus CG1820 RNA-dependent RNA polymerase gene in L RNA
            segment
          Length = 6550

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 8    acctttaattgaagcagatac 28
            |||||||||||||||||||||
Sbjct: 3198 acctttaattgaagcagatac 3178



to top

>ref|NM_178965.1| Arabidopsis thaliana unknown protein AT4G04340 transcript variant
            AT4G04340.2 mRNA, complete cds
          Length = 2790

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 477  gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 1962 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 2017



to top

>ref|NM_116672.2| Arabidopsis thaliana unknown protein AT4G04340 transcript variant
            AT4G04340.1 mRNA, complete cds
          Length = 2788

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 477  gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 1960 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 2015



to top

>ref|NM_178966.1| Arabidopsis thaliana unknown protein AT4G04340 transcript variant
            AT4G04340.3 mRNA, complete cds
          Length = 3086

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 477  gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 2258 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 2313



to top

>gb|AF069441.1| Arabidopsis thaliana BAC T19B17 from chromosome IV, near 19.3 cM,
             complete sequence
          Length = 105830

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 477   gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
             |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 62273 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 62218



to top

>gb|AC127607.5| Rattus norvegicus  BAC CH230-41K5 (Children's Hospital Oakland Research
             Institute Rat (BN/SsNHsd/MCW) BAC library) complete
             sequence
          Length = 36313

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 422   ggagaaggacagagaagaggcaat 445
             ||||||| ||||||||||||||||
Sbjct: 20391 ggagaagaacagagaagaggcaat 20368



to top

>gb|AF125313.2| Mus musculus chromosome X clones CT7-508o14, CT7-549H18, CT7-552o8,
             proximal part, complete sequence
          Length = 107641

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   tccaagtattttatattctt 184
             ||||||||||||||||||||
Sbjct: 17423 tccaagtattttatattctt 17404



to top

>gb|AC121313.8| Mus musculus chromosome 14, clone RP24-395N22, complete sequence
          Length = 131620

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ttgaagcagataccattaaa 35
             ||||||||||||||||||||
Sbjct: 14680 ttgaagcagataccattaaa 14699



to top

>emb|CR932227.1|CNS0KYIH Ribonuclease with two RNaseIII domains, Paramecium tetraurelia
            macronuclear gene
          Length = 2121

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 177  atattcttgttcttcaatgt 196
            ||||||||||||||||||||
Sbjct: 2087 atattcttgttcttcaatgt 2068



to top

>emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on chromosome 1q42.1-43
            Contains part of the OBSCN gene for obscurin cytoskeletal
            calmodulin and titin-interacting RhoGEF protein and four
            CpG islands, complete sequence
          Length = 135964

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tctgctttggagcagcttaa 241
            ||||||||||||||||||||
Sbjct: 4847 tctgctttggagcagcttaa 4828



to top

>gb|AY056305.1| Arabidopsis thaliana unknown protein (At4g04340) mRNA, complete cds
          Length = 2721

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 477  gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 1941 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 1996



to top

>gb|AC118273.4| Homo sapiens chromosome 11, clone RP11-107P7, complete sequence
          Length = 187529

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gacagagaagaggcaatgga 448
             ||||||||||||||||||||
Sbjct: 42339 gacagagaagaggcaatgga 42358



to top

>emb|AL161500.2|ATCHRIV12 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 12
          Length = 199759

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 477   gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
             |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 47587 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 47642



to top

>emb|AJ314898.1|HSA314898 Homo sapiens partial OBSCN gene for obscurin, exons 5-11
          Length = 24545

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tctgctttggagcagcttaa 241
            ||||||||||||||||||||
Sbjct: 3677 tctgctttggagcagcttaa 3658



to top

>gb|AC117746.6| Homo sapiens chromosome 11, clone RP11-159C12, complete sequence
          Length = 157527

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gacagagaagaggcaatgga 448
              ||||||||||||||||||||
Sbjct: 124603 gacagagaagaggcaatgga 124584



to top

>gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, complete sequence
          Length = 180504

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   agtattttatattcttgttc 188
             ||||||||||||||||||||
Sbjct: 50987 agtattttatattcttgttc 50968



to top

>gb|AY093209.1| Arabidopsis thaliana unknown protein (At4g04340) mRNA, complete cds
          Length = 2735

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 477  gagcctcgaatacagctatatttcttgcttggtcttgtgtatgctgcagtgacacc 532
            |||||||  |||||||| || ||| | ||||||||||| |||||| | ||||||||
Sbjct: 1960 gagcctcagatacagctttacttccttcttggtcttgtctatgctcctgtgacacc 2015



to top

>gb|AC084851.2| Homo sapiens chromosome 11, clone CTD-2132H18, complete sequence
          Length = 76534

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gacagagaagaggcaatgga 448
             ||||||||||||||||||||
Sbjct: 52349 gacagagaagaggcaatgga 52368



to top

>gb|AC148699.1| Macaca mulatta Major Histocompatibility Complex BAC MMU274L13, complete
             sequence
          Length = 210164

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 581   ctaccgccatcagatcattaatgt 604
             |||||||||||| |||||||||||
Sbjct: 94714 ctaccgccatcacatcattaatgt 94691



to top

>emb|AL114761.1|CNS01BW1 Botrytis cinerea strain T4 cDNA library
          Length = 636

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 168 aagtattttatattcttgttcttcaatgtatttttg 203
           |||||||||||||| ||||| || ||| ||||||||
Sbjct: 535 aagtattttatatttttgttttttaatttatttttg 570



to top

>gb|AC154315.2| Mus musculus BAC clone RP23-348I6 from chromosome 14, complete sequence
          Length = 187052

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 16     ttgaagcagataccattaaa 35
              ||||||||||||||||||||
Sbjct: 163346 ttgaagcagataccattaaa 163365



to top

>gb|AC084633.1|CBRG45G04 Caenorhabditis briggsae cosmid G45G04, complete sequence
          Length = 43840

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ttcttcaatgtatttttggg 205
             ||||||||||||||||||||
Sbjct: 11732 ttcttcaatgtatttttggg 11713



to top

>emb|AJ249082.2|PPL249082 Pleuronectes platessa UGT1 gene for UDP-glucuronosyltransferase
          Length = 4354

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 aggacagagaagaggcaatg 446
           ||||||||||||||||||||
Sbjct: 328 aggacagagaagaggcaatg 347



to top

>emb|AJ249081.1|PPL249081 Pleuronectes platessa mRNA for UDP-glucuronosyltransferase-1
          Length = 1655

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 aggacagagaagaggcaatg 446
           ||||||||||||||||||||
Sbjct: 10  aggacagagaagaggcaatg 29



to top

>gb|AC021867.19| Homo sapiens 3 BAC RP11-220G20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 146809

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  tatatttcttgcttggtctt 512
            ||||||||||||||||||||
Sbjct: 4462 tatatttcttgcttggtctt 4481



to top

>dbj|AP004607.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-529A4, complete
              sequence
          Length = 160683

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 429    gacagagaagaggcaatgga 448
              ||||||||||||||||||||
Sbjct: 159082 gacagagaagaggcaatgga 159101



to top

>dbj|AP000827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-716D19, complete
             sequence
          Length = 168579

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 429   gacagagaagaggcaatgga 448
             ||||||||||||||||||||
Sbjct: 41163 gacagagaagaggcaatgga 41182



to top

>dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-686G23, complete
             sequences
          Length = 177933

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   agtattttatattcttgttc 188
             ||||||||||||||||||||
Sbjct: 66308 agtattttatattcttgttc 66327



to top

>dbj|AP003122.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-313I2, complete
              sequence
          Length = 137888

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 429    gacagagaagaggcaatgga 448
              ||||||||||||||||||||
Sbjct: 119236 gacagagaagaggcaatgga 119217



to top

>dbj|AK113957.1| Ciona intestinalis cDNA, clone:cicl018l06, full insert sequence
          Length = 2364

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 tgcttggtcttgtgtatgct 521
           ||||||||||||||||||||
Sbjct: 283 tgcttggtcttgtgtatgct 264



to top

>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 383     tgtactataccacttgaaaaactt 406
               |||||| |||||||||||||||||
Sbjct: 1353890 tgtactgtaccacttgaaaaactt 1353867



to top

>gb|DQ146749.1| Uncultured archaeon clone oBS65f.93 16S ribosomal RNA gene, partial
           sequence
          Length = 790

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 396 ttgaaaaactttttcttggt 415
           ||||||||||||||||||||
Sbjct: 309 ttgaaaaactttttcttggt 328



to top

>emb|AL731843.14| Mouse DNA sequence from clone RP23-300F6 on chromosome X, complete
            sequence
          Length = 226657

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  tccaagtattttatattctt 184
            ||||||||||||||||||||
Sbjct: 2937 tccaagtattttatattctt 2918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,100,391
Number of Sequences: 3902068
Number of extensions: 6100391
Number of successful extensions: 119001
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118713
Number of HSP's gapped (non-prelim): 281
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top