>SCS7_YEAST (Q03529) Inositolphosphorylceramide-B C-26 hydroxylase (EC 1.-.-.-)|
           (IPC-B hydroxylase)
          Length = 384

 Score =  124 bits (310), Expect = 2e-28
 Identities = 67/155 (43%), Positives = 91/155 (58%), Gaps = 8/155 (5%)
 Frame = +3

Query: 111 VDLDKPLVFQV---GHLEEHYQEWVHQPIVSKEGPRFFANDTMEFLTRTKWWAVPVIWLP 281
           +DL++PL+ Q+      ++ Y + +H+P    +G      + +E LT+T WW VPV WLP
Sbjct: 148 LDLNRPLLMQILRSDFKKDFYVDQIHRPRHYGKGSAPLFGNFLEPLTKTAWWVVPVAWLP 207

Query: 282 VVCWLFAKSILMGHTIQELILMALF--GVFVWTLIEYSLHRFLFHIETKSYWSNTA---H 446
           VV +    ++     + +L    LF  GVFVWTLIEY LHRFLFH +     SN A   H
Sbjct: 208 VVVYHMGVAL---KNMNQLFACFLFCVGVFVWTLIEYGLHRFLFHFDDWLPESNIAFATH 264

Query: 447 YLIHGCHHKHPMDSLRLVFPPAGAAILCVPFWNVV 551
           +L+HGCHH  PMD  RLV PP    ILC PF+ +V
Sbjct: 265 FLLHGCHHYLPMDKYRLVMPPTLFVILCAPFYKLV 299

>CBX2_HUMAN (Q14781) Chromobox protein homolog 2|
          Length = 532

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 18/48 (37%), Positives = 27/48 (56%)
 Frame = +2

Query: 35  PLPSTELSAALIDWGRVEDGCPGVRRRSRQASCFPGWPSRGTLPGMGS 178
           P P+ ELS  ++D   V++G PGV   +R A+   G P+    PG G+
Sbjct: 345 PAPTQELSLQVLDLQSVKNGMPGVGLLARHATATKGVPATNPAPGKGT 392

>YCBP_BACSU (P42248) Hypothetical protein ycbP (ORF15)|
          Length = 128

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 282 VVCWLFAKSILMGHTIQELILMALFGVFVWTLIEYSLHRFLFHIE 416
           +V WL    + MG T  E+ L ALFG  V  + EY  H ++   E
Sbjct: 71  LVIWLMGMPLSMGMTGGEVALAALFGAIVMAIGEYCFHFYMMSKE 115

>Y1445_METJA (Q58840) Hypothetical protein MJ1445|
          Length = 176

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 375 LIEYSLHRF-LFHIETKSYWSNTAHYLIHGCHHKHPMDSLRLVFP 506
           +IEY+ ++F L H    SY  N   ++IHG HH + +D    + P
Sbjct: 94  VIEYNGYKFMLIHNPDSSYTLNFDGWIIHGHHHANHLDEYPFINP 138

>BSN_RAT (O88778) Bassoon protein|
          Length = 3937

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 14/95 (14%)
 Frame = -3

Query: 258 PTTLCVSRTPWYHLRKSVDLLC*RWVGEPIPGSVPRDGQP---------GKQEACRDRRR 106
           PT   V +T W  L      L    +GEP P  +P   +P         G     +   +
Sbjct: 496 PTPHLVEKTEWLCLNCQTKRLLEGSLGEPAPLPLPTPQEPPAGVPQRAAGASPLKQKGPQ 555

Query: 105 TPGQPSSTL-----PQSIRAALSSVDGNGQRKATR 16
            PGQPS +L     PQ+ +A+  +   + Q K  R
Sbjct: 556 GPGQPSGSLPPKASPQAAKASPQAAKASPQAKPLR 590

>CSKI1_HUMAN (Q8WXD9) Caskin-1 (CASK-interacting protein 1)|
          Length = 1431

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
 Frame = -3

Query: 177  EPIPGSVPRDGQPGKQEACRDRRRTPGQPSSTLPQSIRA-----ALSSVDGNGQRKATRK 13
            EP+P + P DG  G +  CR      G   +    S+++      LSS+ G G  +A R+
Sbjct: 965  EPVPDAEPEDGLLGVRAQCRRASDLAGSVDTGSAGSVKSIAAMLELSSIGGGG--RAARR 1022

Query: 12   P 10
            P
Sbjct: 1023 P 1023

>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent|
           RNA helicase mle) (Protein male-less) (Protein no action
           potential)
          Length = 1293

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 369 WTLIEYSLHRFLFHIETKSYWSNTAHYLIHGCHHKHPMDSLRLVFPP 509
           W LI ++L +FL   +  + + +T+ Y I  CH + P D  R VF P
Sbjct: 663 WNLI-FALMKFL---QNTNIFGDTSQYQILPCHSQIPRDEQRKVFEP 705

>DPOG1_HUMAN (P54098) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 189 RWVGEPIPGSVPRDGQPGKQEACRDRRRTPGQP 91
           RWV   +P S P DGQ  +Q+  + +++   QP
Sbjct: 24  RWVSSSVPASDPSDGQRRRQQQQQQQQQQQQQP 56

>NAH2_SCHPO (O14123) Probable Na(+)/H(+) antiporter C3A11.09|
          Length = 759

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 219 NDTMEFLTRTKWWAVPVIWLPVVCWLFAKSILM 317
           ND +E      W+ + V+W PVVC+L   SI++
Sbjct: 395 NDAIENPEIPNWYCIQVMW-PVVCFLVLSSIIV 426

>EDDF1_HUMAN (O60584) Erythroid differentiation and denucleation factor 1|
          Length = 74

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 517 APAGGNTSLSESIGCLWWHPWI 452
           A AGG  SL  S+ C  W PWI
Sbjct: 34  AQAGGPASLLASLTCWGWRPWI 55

>DLG5_HUMAN (Q8TDM6) Discs large homolog 5 (Placenta and prostate DLG) (Discs|
            large protein P-dlg)
          Length = 1809

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 26/84 (30%), Positives = 37/84 (44%)
 Frame = +2

Query: 32   CPLPSTELSAALIDWGRVEDGCPGVRRRSRQASCFPGWPSRGTLPGMGSPTHRQQRRSTL 211
            C   S ELS  L +W       PG   R      +P  PS GT+P   +P+      S++
Sbjct: 1028 CVPASGELSPELQEWAPYS---PGHSSRHSNPPLYPSRPSVGTVPRSLTPS---TTVSSI 1081

Query: 212  FRK*YHGVLDTHKVVGCASHMATR 283
             R   + V  +H+V  C+S  A R
Sbjct: 1082 LRNPIYTV-RSHRVGPCSSPPAAR 1104


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,822,656
Number of Sequences: 219361
Number of extensions: 2149729
Number of successful extensions: 6219
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6213
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)