ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63a08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
2ref|NM_184996.1| Oryza sativa (japonica cultivar-group), mRNA 363 4e-97
3dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
4gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence 317 2e-83
5gb|AY106784.1| Zea mays PCO100577 mRNA sequence 317 2e-83
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 121 3e-24
7gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 121 3e-24
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
9ref|XM_322749.1| Neurospora crassa OR74A hypothetical protein (N... 64 5e-07
10ref|XM_950786.1| Neurospora crassa OR74A hypothetical protein (N... 64 5e-07
11emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II B... 64 5e-07
12ref|XM_754701.1| Ustilago maydis 521 hypothetical protein (UM036... 46 0.12
13dbj|AP004983.1| Lotus japonicus genomic DNA, chromosome 6, clone... 46 0.12
14gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Can... 42 1.9
15gb|AC005907.1| Homo sapiens 12q24.1 PAC P443K8 (Rosewell Park Ca... 42 1.9
16gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 42 1.9
17ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLA... 40 7.6
18gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
19gb|AC119162.12| Mus musculus chromosome 3, clone RP23-231L12, co... 40 7.6
20emb|Z81088.1|CEF53F1 Caenorhabditis elegans Cosmid F53F1, comple... 40 7.6
21gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1... 40 7.6
22gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome... 40 7.6
23gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 ma... 40 7.6
24gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, com... 40 7.6
25gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.6
26ref|NM_073924.2| Caenorhabditis elegans F53F1.5 (cuticlin) mRNA,... 40 7.6
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
28ref|NM_001011258.1| Xenopus tropicalis hypothetical LOC496708 (L... 40 7.6
29gb|AE005063.1| Halobacterium sp. NRC-1 section 94 of 170 of the ... 40 7.6
30dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
31gb|BC087569.2| Xenopus tropicalis hypothetical LOC496708, mRNA (... 40 7.6
32dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
33emb|CR761166.2| Xenopus tropicalis finished cDNA, clone TEgg038a23 40 7.6
34gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
35emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.6
36gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxyla... 40 7.6
37emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on ch... 40 7.6
38emb|X74838.1|CECUT2 C.elegans cut-2 gene for cuticlin 2 40 7.6

>dbj|AK059874.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F06, full
           insert sequence
          Length = 1045

 Score =  371 bits (187), Expect = 2e-99
 Identities = 391/459 (85%)
 Strand = Plus / Plus

                                                                       
Query: 86  gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggttgg 145
           |||||||||||||||||||||| |||| |||||  |||||||||| ||||||||||||||
Sbjct: 116 gaagatggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggttgg 175

                                                                       
Query: 146 ccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaagaaggtcc 205
           |||||| |||||||  || |||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 176 ccatcttgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaaggaaggtcc 235

                                                                       
Query: 206 acgctttttcgcaaatgataccatggagttcttgacacgcacaaagtggtgggctgtgcc 265
           ||||||||||| |||||||  | ||||||||||||| |||||||||||||  ||||||||
Sbjct: 236 acgctttttcggaaatgatgtcctggagttcttgacgcgcacaaagtggtttgctgtgcc 295

                                                                       
Query: 266 agtcatatggctacccgtcgtctgctggctgtttgccaagtctattctgatgggtcacac 325
           |  ||||||||| || |||||||||||| || |||  || ||||||| ||||||||| ||
Sbjct: 296 aaccatatggctgcctgtcgtctgctggttgcttgtgaaatctattcggatgggtcatac 355

                                                                       
Query: 326 cattcaggaattaatccttatggccctgtttggagtgtttgtctggacgttgattgagta 385
            ||||||||| ||   || |||||||| |||||| | ||  | ||||| ||||| |||||
Sbjct: 356 tattcaggaagtaggtctaatggccctatttggaatattcatttggacattgatcgagta 415

                                                                       
Query: 386 cagtttgcaccgcttcctcttccacatcgagacgaagagctattggtcgaacacagcaca 445
            | ||||||||||||||| |||||||| ||||| || | ||||||| | |||||||||||
Sbjct: 416 tactttgcaccgcttcctattccacattgagaccaaaacctattgggcaaacacagcaca 475

                                                                       
Query: 446 ttacttaatccatggatgccaccataagcatcctatggactcgctcaggctcgtattccc 505
           |||| |  | |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 476 ttaccttcttcatggatgccaccataagcatcctatggactcactcaggcttgtattccc 535

                                                  
Query: 506 tcctgctggggcagcgatcttatgtgtgccgttctggaa 544
            ||| |||   |||| || || |||||||||||||||||
Sbjct: 536 ccctactgcaacagcaattttgtgtgtgccgttctggaa 574



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>ref|NM_184996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 714

 Score =  363 bits (183), Expect = 4e-97
 Identities = 387/455 (85%)
 Strand = Plus / Plus

                                                                       
Query: 90  atggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggttggccat 149
           |||||||||||||||||| |||| |||||  |||||||||| ||||||||||||||||||
Sbjct: 1   atggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggttggccat 60

                                                                       
Query: 150 ctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaagaaggtccacgc 209
           || |||||||  || |||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 61  cttgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaaggaaggtccacgc 120

                                                                       
Query: 210 tttttcgcaaatgataccatggagttcttgacacgcacaaagtggtgggctgtgccagtc 269
           ||||||| |||||||  | ||||||||||||| |||||||||||||  |||||||||  |
Sbjct: 121 tttttcggaaatgatgtcctggagttcttgacgcgcacaaagtggtttgctgtgccaacc 180

                                                                       
Query: 270 atatggctacccgtcgtctgctggctgtttgccaagtctattctgatgggtcacaccatt 329
           |||||||| || |||||||||||| || |||  || ||||||| ||||||||| || |||
Sbjct: 181 atatggctgcctgtcgtctgctggttgcttgtgaaatctattcggatgggtcatactatt 240

                                                                       
Query: 330 caggaattaatccttatggccctgtttggagtgtttgtctggacgttgattgagtacagt 389
           |||||| ||   || |||||||| |||||| | ||  | ||||| ||||| ||||| | |
Sbjct: 241 caggaagtaggtctaatggccctatttggaatattcatttggacattgatcgagtatact 300

                                                                       
Query: 390 ttgcaccgcttcctcttccacatcgagacgaagagctattggtcgaacacagcacattac 449
           |||||||||||||| |||||||| ||||| || | ||||||| | |||||||||||||||
Sbjct: 301 ttgcaccgcttcctattccacattgagaccaaaacctattgggcaaacacagcacattac 360

                                                                       
Query: 450 ttaatccatggatgccaccataagcatcctatggactcgctcaggctcgtattccctcct 509
            |  | |||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct: 361 cttcttcatggatgccaccataagcatcctatggactcactcaggcttgtattcccccct 420

                                              
Query: 510 gctggggcagcgatcttatgtgtgccgttctggaa 544
            |||   |||| || || |||||||||||||||||
Sbjct: 421 actgcaacagcaattttgtgtgtgccgttctggaa 455



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>dbj|AK103085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118H09, full
           insert sequence
          Length = 1229

 Score =  355 bits (179), Expect = 1e-94
 Identities = 389/459 (84%)
 Strand = Plus / Plus

                                                                       
Query: 86  gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggttgg 145
           |||||||||||||||||||||| |||| |||||  |||||||||| ||||||||||||||
Sbjct: 217 gaagatggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggttgg 276

                                                                       
Query: 146 ccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaagaaggtcc 205
           |||||  |||||||  || |||||||||||||| ||||| ||||| ||||| ||||||||
Sbjct: 277 ccatcatgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaaggaaggtcc 336

                                                                       
Query: 206 acgctttttcgcaaatgataccatggagttcttgacacgcacaaagtggtgggctgtgcc 265
           ||||||||||| |||||||  | ||||||||||||| |||||||||||||  ||||||||
Sbjct: 337 acgctttttcggaaatgatgtcctggagttcttgacgcgcacaaagtggtttgctgtgcc 396

                                                                       
Query: 266 agtcatatggctacccgtcgtctgctggctgtttgccaagtctattctgatgggtcacac 325
           |  ||||||||| || |||||||||||| || |||  || ||||||| ||||||||| ||
Sbjct: 397 aaccatatggctgcctgtcgtctgctggttgcttgtgaaatctattcggatgggtcatac 456

                                                                       
Query: 326 cattcaggaattaatccttatggccctgtttggagtgtttgtctggacgttgattgagta 385
            ||||||||| ||   || |||||||| |||||| | ||  | ||||| ||||| |||||
Sbjct: 457 tattcaggaagtaggtctaatggccctatttggaatattcatttggacattgatcgagta 516

                                                                       
Query: 386 cagtttgcaccgcttcctcttccacatcgagacgaagagctattggtcgaacacagcaca 445
            | ||||||||||||||| |||||||| | ||| || | ||||||| | |||||||||||
Sbjct: 517 tactttgcaccgcttcctattccacattgggaccaaaacctattgggcaaacacagcaca 576

                                                                       
Query: 446 ttacttaatccatggatgccaccataagcatcctatggactcgctcaggctcgtattccc 505
           |||| |  | |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 577 ttaccttcttcatggatgccaccataagcatcctatggactcactcaggcttgtattccc 636

                                                  
Query: 506 tcctgctggggcagcgatcttatgtgtgccgttctggaa 544
            ||| |||   |||| || || |||||||||||||||||
Sbjct: 637 ccctactgcaacagcaattttgtgtgtgccgttctggaa 675



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>gb|BT018076.1| Zea mays clone EL01N0551G08.c mRNA sequence
          Length = 1084

 Score =  317 bits (160), Expect = 2e-83
 Identities = 358/424 (84%)
 Strand = Plus / Plus

                                                                       
Query: 86  gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggttgg 145
           |||||||||||||||||||||| | || |||||| ||||||| |||||||||||||||||
Sbjct: 99  gaagatggttgtccaggagttcacagttgatctcaacaagccccttgttttccaggttgg 158

                                                                       
Query: 146 ccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaagaaggtcc 205
            ||||| |||||||  ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 159 tcatcttgaggaacggtaccaggaatgggttcaccaaccgatcgtcagcaaggagggtcc 218

                                                                       
Query: 206 acgctttttcgcaaatgataccatggagttcttgacacgcacaaagtggtgggctgtgcc 265
           ||||||||||| |||||||  | ||||||||||||| ||||| |||||||||||||||||
Sbjct: 219 acgctttttcggaaatgatgtcctggagttcttgactcgcacgaagtggtgggctgtgcc 278

                                                                       
Query: 266 agtcatatggctacccgtcgtctgctggctgtttgccaagtctattctgatgggtcacac 325
           |   |||||||| || || |||||||| ||| | |  || ||||||||||||||||| ||
Sbjct: 279 aactatatggctgcctgttgtctgctgcctgctcgtgaaatctattctgatgggtcatac 338

                                                                       
Query: 326 cattcaggaattaatccttatggccctgtttggagtgtttgtctggacgttgattgagta 385
           | |||||||  ||    | ||||| ||||||||  | ||| | |||||| |||| || ||
Sbjct: 339 cgttcaggacgtagctatgatggctctgtttgggatatttatttggacgctgatcgaata 398

                                                                       
Query: 386 cagtttgcaccgcttcctcttccacatcgagacgaagagctattggtcgaacacagcaca 445
           || ||||||||||||||| |||||||||||||| |||| ||| |||| |||||| |||||
Sbjct: 399 cactttgcaccgcttcctgttccacatcgagaccaagacctactggtggaacaccgcaca 458

                                                                       
Query: 446 ttacttaatccatggatgccaccataagcatcctatggactcgctcaggctcgtattccc 505
           |||| |  | || || |||||||||||||| || ||||||||||||||||| || || ||
Sbjct: 459 ttaccttcttcacgggtgccaccataagcaccccatggactcgctcaggcttgtgtttcc 518

               
Query: 506 tcct 509
           ||||
Sbjct: 519 tcct 522



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>gb|AY106784.1| Zea mays PCO100577 mRNA sequence
          Length = 1072

 Score =  317 bits (160), Expect = 2e-83
 Identities = 358/424 (84%)
 Strand = Plus / Plus

                                                                       
Query: 86  gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggttgg 145
           |||||||||||||||||||||| | || |||||| ||||||| |||||||||||||||||
Sbjct: 156 gaagatggttgtccaggagttcacagttgatctcaacaagccccttgttttccaggttgg 215

                                                                       
Query: 146 ccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaagaaggtcc 205
           |||||| |||||||  ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 216 ccatcttgaggaacggtaccaggaatgggttcaccaaccgatcgtcagcaaggagggtcc 275

                                                                       
Query: 206 acgctttttcgcaaatgataccatggagttcttgacacgcacaaagtggtgggctgtgcc 265
           ||||||||||| |||||||  | ||||||||||||| ||||| |||||||||||||||||
Sbjct: 276 acgctttttcggaaatgatgtcctggagttcttgactcgcacgaagtggtgggctgtgcc 335

                                                                       
Query: 266 agtcatatggctacccgtcgtctgctggctgtttgccaagtctattctgatgggtcacac 325
           |   |||||||| || || |||||||| ||| | |  || ||||||||||||||||| ||
Sbjct: 336 aactatatggctgcctgttgtctgctgcctgctcgtgaaatctattctgatgggtcatac 395

                                                                       
Query: 326 cattcaggaattaatccttatggccctgtttggagtgtttgtctggacgttgattgagta 385
           | |||||||  ||    | ||||| ||||||||  | ||| | |||||| |||| || ||
Sbjct: 396 cgttcaggacgtagctatgatggctctgtttgggatatttatttggacgctgatcgaata 455

                                                                       
Query: 386 cagtttgcaccgcttcctcttccacatcgagacgaagagctattggtcgaacacagcaca 445
           || ||||||||||||||| |||||||||||||| |||| ||| |||| |||||| |||||
Sbjct: 456 cactttgcaccgcttcctgttccacatcgagaccaagacctactggtggaacaccgcaca 515

                                                                       
Query: 446 ttacttaatccatggatgccaccataagcatcctatggactcgctcaggctcgtattccc 505
           |||| |  | || || |||||||||||||| || |||||||| |||||||| || || ||
Sbjct: 516 ttaccttcttcacgggtgccaccataagcaccccatggactcactcaggcttgtgtttcc 575

               
Query: 506 tcct 509
           ||||
Sbjct: 576 tcct 579



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  121 bits (61), Expect = 3e-24
 Identities = 166/201 (82%)
 Strand = Plus / Plus

                                                                            
Query: 232      agttcttgacacgcacaaagtggtgggctgtgccagtcatatggctacccgtcgtctgct 291
                |||||||||| |||||||||||||  |||||||||  ||||||||| || ||||||||||
Sbjct: 32073361 agttcttgacgcgcacaaagtggtttgctgtgccaaccatatggctgcctgtcgtctgct 32073420

                                                                            
Query: 292      ggctgtttgccaagtctattctgatgggtcacaccattcaggaattaatccttatggccc 351
                || || |||  || ||||||| ||||||||| || ||||||||| ||   || |||||||
Sbjct: 32073421 ggttgcttgtgaaatctattcggatgggtcatactattcaggaagtaggtctaatggccc 32073480

                                                                            
Query: 352      tgtttggagtgtttgtctggacgttgattgagtacagtttgcaccgcttcctcttccaca 411
                | |||||| | ||  | ||||| ||||| ||||| | ||||||||||||||| |||||||
Sbjct: 32073481 tatttggaatattcatttggacattgatcgagtatactttgcaccgcttcctattccaca 32073540

                                     
Query: 412      tcgagacgaagagctattggt 432
                | ||||| || | ||||||||
Sbjct: 32073541 ttgagaccaaaacctattggt 32073561



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                            
Query: 139      aggttggccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaag 198
                ||||||||||||| |||||||  || |||||||||||||| ||||| ||||| ||||| |
Sbjct: 32073197 aggttggccatcttgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaagg 32073256

                                          
Query: 199      aaggtccacgctttttcgcaaatgat 224
                |||||||||||||||||| |||||||
Sbjct: 32073257 aaggtccacgctttttcggaaatgat 32073282



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 435      aacacagcacattacttaatccatggatgccaccataagcatcctatggactcgctcagg 494
                ||||||||||||||| |  | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 32073649 aacacagcacattaccttcttcatggatgccaccataagcatcctatggactcactcagg 32073708

                           
Query: 495      ctcgtattccc 505
                || ||||||||
Sbjct: 32073709 cttgtattccc 32073719



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 86       gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggtt 143
                |||||||||||||||||||||| |||| |||||  |||||||||| ||||||||||||
Sbjct: 32072877 gaagatggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggtt 32072934



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>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score =  121 bits (61), Expect = 3e-24
 Identities = 166/201 (82%)
 Strand = Plus / Plus

                                                                         
Query: 232   agttcttgacacgcacaaagtggtgggctgtgccagtcatatggctacccgtcgtctgct 291
             |||||||||| |||||||||||||  |||||||||  ||||||||| || ||||||||||
Sbjct: 74486 agttcttgacgcgcacaaagtggtttgctgtgccaaccatatggctgcctgtcgtctgct 74545

                                                                         
Query: 292   ggctgtttgccaagtctattctgatgggtcacaccattcaggaattaatccttatggccc 351
             || || |||  || ||||||| ||||||||| || ||||||||| ||   || |||||||
Sbjct: 74546 ggttgcttgtgaaatctattcggatgggtcatactattcaggaagtaggtctaatggccc 74605

                                                                         
Query: 352   tgtttggagtgtttgtctggacgttgattgagtacagtttgcaccgcttcctcttccaca 411
             | |||||| | ||  | ||||| ||||| ||||| | ||||||||||||||| |||||||
Sbjct: 74606 tatttggaatattcatttggacattgatcgagtatactttgcaccgcttcctattccaca 74665

                                  
Query: 412   tcgagacgaagagctattggt 432
             | ||||| || | ||||||||
Sbjct: 74666 ttgagaccaaaacctattggt 74686



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                         
Query: 139   aggttggccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaag 198
             ||||||||||||| |||||||  || |||||||||||||| ||||| ||||| ||||| |
Sbjct: 74322 aggttggccatcttgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaagg 74381

                                       
Query: 199   aaggtccacgctttttcgcaaatgat 224
             |||||||||||||||||| |||||||
Sbjct: 74382 aaggtccacgctttttcggaaatgat 74407



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                         
Query: 435   aacacagcacattacttaatccatggatgccaccataagcatcctatggactcgctcagg 494
             ||||||||||||||| |  | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 74774 aacacagcacattaccttcttcatggatgccaccataagcatcctatggactcactcagg 74833

                        
Query: 495   ctcgtattccc 505
             || ||||||||
Sbjct: 74834 cttgtattccc 74844



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                       
Query: 86    gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggtt 143
             |||||||||||||||||||||| |||| |||||  |||||||||| ||||||||||||
Sbjct: 74002 gaagatggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggtt 74059



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  121 bits (61), Expect = 3e-24
 Identities = 166/201 (82%)
 Strand = Plus / Plus

                                                                            
Query: 232      agttcttgacacgcacaaagtggtgggctgtgccagtcatatggctacccgtcgtctgct 291
                |||||||||| |||||||||||||  |||||||||  ||||||||| || ||||||||||
Sbjct: 32163873 agttcttgacgcgcacaaagtggtttgctgtgccaaccatatggctgcctgtcgtctgct 32163932

                                                                            
Query: 292      ggctgtttgccaagtctattctgatgggtcacaccattcaggaattaatccttatggccc 351
                || || |||  || ||||||| ||||||||| || ||||||||| ||   || |||||||
Sbjct: 32163933 ggttgcttgtgaaatctattcggatgggtcatactattcaggaagtaggtctaatggccc 32163992

                                                                            
Query: 352      tgtttggagtgtttgtctggacgttgattgagtacagtttgcaccgcttcctcttccaca 411
                | |||||| | ||  | ||||| ||||| ||||| | ||||||||||||||| |||||||
Sbjct: 32163993 tatttggaatattcatttggacattgatcgagtatactttgcaccgcttcctattccaca 32164052

                                     
Query: 412      tcgagacgaagagctattggt 432
                | ||||| || | ||||||||
Sbjct: 32164053 ttgagaccaaaacctattggt 32164073



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                            
Query: 139      aggttggccatctcgaggaacactaccaggaatgggttcaccaacccatcgtcagcaaag 198
                ||||||||||||| |||||||  || |||||||||||||| ||||| ||||| ||||| |
Sbjct: 32163709 aggttggccatcttgaggaacgttatcaggaatgggttcatcaacctatcgtgagcaagg 32163768

                                          
Query: 199      aaggtccacgctttttcgcaaatgat 224
                |||||||||||||||||| |||||||
Sbjct: 32163769 aaggtccacgctttttcggaaatgat 32163794



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Plus

                                                                            
Query: 435      aacacagcacattacttaatccatggatgccaccataagcatcctatggactcgctcagg 494
                ||||||||||||||| |  | |||||||||||||||||||||||||||||||| ||||||
Sbjct: 32164161 aacacagcacattaccttcttcatggatgccaccataagcatcctatggactcactcagg 32164220

                           
Query: 495      ctcgtattccc 505
                || ||||||||
Sbjct: 32164221 cttgtattccc 32164231



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                          
Query: 86       gaagatggttgtccaggagttcgccgtcgatctcgacaagcctcttgttttccaggtt 143
                |||||||||||||||||||||| |||| |||||  |||||||||| ||||||||||||
Sbjct: 32163389 gaagatggttgtccaggagttcaccgttgatctgaacaagcctctcgttttccaggtt 32163446



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>ref|XM_322749.1| Neurospora crassa OR74A hypothetical protein (NCU03492.1) partial
           mRNA
          Length = 1116

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 367 tctggacgttgattgagtacagtttgcaccgcttcctcttccac 410
           ||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 674 tctggacgttgattgagtacattttgcatcgcttcctgttccac 717



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>ref|XM_950786.1| Neurospora crassa OR74A hypothetical protein (NCU03492.1) partial
           mRNA
          Length = 1116

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                       
Query: 367 tctggacgttgattgagtacagtttgcaccgcttcctcttccac 410
           ||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 674 tctggacgttgattgagtacattttgcatcgcttcctgttccac 717



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>emb|AL669988.1|NCB23H20 Neurospora crassa DNA linkage group II BAC contig B23H20
          Length = 122151

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 41/44 (93%)
 Strand = Plus / Plus

                                                         
Query: 367   tctggacgttgattgagtacagtttgcaccgcttcctcttccac 410
             ||||||||||||||||||||| |||||| |||||||| ||||||
Sbjct: 50326 tctggacgttgattgagtacattttgcatcgcttcctgttccac 50369



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>ref|XM_754701.1| Ustilago maydis 521 hypothetical protein (UM03647.1) partial mRNA
          Length = 1185

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 393 caccgcttcctcttccacatcga 415
           |||||||||||||||||||||||
Sbjct: 796 caccgcttcctcttccacatcga 818



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>dbj|AP004983.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04L20, TM0437b,
             complete sequence
          Length = 51960

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 454   tccatggatgccaccataagcatcctatgga 484
             ||||||| ||||||||||||||||| |||||
Sbjct: 19984 tccatggctgccaccataagcatcccatgga 20014



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>gb|AC144548.8| Homo sapiens 12 BAC RP11-478C19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 174974

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 500   attccctcctgctggggcagc 520
             |||||||||||||||||||||
Sbjct: 31248 attccctcctgctggggcagc 31228



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>gb|AC005907.1| Homo sapiens 12q24.1 PAC P443K8 (Rosewell Park Cancer Institute Human
             Pac Library) complete sequence
          Length = 36200

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 500   attccctcctgctggggcagc 520
             |||||||||||||||||||||
Sbjct: 24367 attccctcctgctggggcagc 24347



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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 129     cttgttttccaggttggccatctcg 153
               |||||||||||||||| ||||||||
Sbjct: 1958947 cttgttttccaggttgaccatctcg 1958971



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>ref|NM_129030.2| Arabidopsis thaliana FAH1 (FATTY ACID HYDROXYLASE 1); catalytic
           AT2G34770 (FAH1) mRNA, complete cds
          Length = 1142

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 aggaatgggttcaccaacccatcg 189
           ||||||||||||||||||| ||||
Sbjct: 316 aggaatgggttcaccaacctatcg 339



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>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone
             OSJNBb0003F09, complete sequence
          Length = 159600

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   caggaatgggttcaccaacc 184
             ||||||||||||||||||||
Sbjct: 62904 caggaatgggttcaccaacc 62923



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>gb|AC119162.12| Mus musculus chromosome 3, clone RP23-231L12, complete sequence
          Length = 201218

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    tttgccaagtctattctgat 316
              ||||||||||||||||||||
Sbjct: 105789 tttgccaagtctattctgat 105808



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>emb|Z81088.1|CEF53F1 Caenorhabditis elegans Cosmid F53F1, complete sequence
          Length = 39478

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 504   cctcctgctggggcagcgat 523
             ||||||||||||||||||||
Sbjct: 26011 cctcctgctggggcagcgat 25992



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>gb|BT000482.1| Arabidopsis thaliana fatty acid hydroxylase (FAH1)
           (At2g34770/T29F13.2) mRNA, complete cds
          Length = 714

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 aggaatgggttcaccaacccatcg 189
           ||||||||||||||||||| ||||
Sbjct: 77  aggaatgggttcaccaacctatcg 100



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>gb|AC159281.3| Mus musculus BAC clone RP23-321H9 from chromosome 3, complete sequence
          Length = 229114

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    tttgccaagtctattctgat 316
              ||||||||||||||||||||
Sbjct: 220855 tttgccaagtctattctgat 220836



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>gb|AC003096.3| Arabidopsis thaliana chromosome 2 clone T29F13 map ve016, complete
            sequence
          Length = 69817

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  aggaatgggttcaccaacccatcg 189
            ||||||||||||||||||| ||||
Sbjct: 5527 aggaatgggttcaccaacctatcg 5504



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>gb|AY050326.1| Arabidopsis thaliana At2g34770/T29F13.2 mRNA, complete cds
          Length = 827

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 aggaatgggttcaccaacccatcg 189
           ||||||||||||||||||| ||||
Sbjct: 117 aggaatgggttcaccaacctatcg 140



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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 98      ccaggagttcgccgtcgatc 117
               ||||||||||||||||||||
Sbjct: 5218905 ccaggagttcgccgtcgatc 5218886



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>ref|NM_073924.2| Caenorhabditis elegans F53F1.5 (cuticlin) mRNA, complete cds
          Length = 871

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 504 cctcctgctggggcagcgat 523
           ||||||||||||||||||||
Sbjct: 289 cctcctgctggggcagcgat 270



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 165      caggaatgggttcaccaacc 184
                ||||||||||||||||||||
Sbjct: 26937937 caggaatgggttcaccaacc 26937956



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>ref|NM_001011258.1| Xenopus tropicalis hypothetical LOC496708 (LOC496708), mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 aaagtggtgggctgtgccag 267
           ||||||||||||||||||||
Sbjct: 50  aaagtggtgggctgtgccag 69



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>gb|AE005063.1| Halobacterium sp. NRC-1 section 94 of 170 of the complete genome
          Length = 11844

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 97   tccaggagttcgccgtcgatctcg 120
            |||||||||||| |||||||||||
Sbjct: 1054 tccaggagttcggcgtcgatctcg 1077



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>dbj|AK069213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010G06, full
           insert sequence
          Length = 1392

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 caggaatgggttcaccaacc 184
           ||||||||||||||||||||
Sbjct: 241 caggaatgggttcaccaacc 260



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>gb|BC087569.2| Xenopus tropicalis hypothetical LOC496708, mRNA (cDNA clone
           MGC:97680 IMAGE:6982160), complete cds
          Length = 951

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 aaagtggtgggctgtgccag 267
           ||||||||||||||||||||
Sbjct: 50  aaagtggtgggctgtgccag 69



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>dbj|AK061110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-D02, full
           insert sequence
          Length = 1438

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 caggaatgggttcaccaacc 184
           ||||||||||||||||||||
Sbjct: 263 caggaatgggttcaccaacc 282



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>emb|CR761166.2| Xenopus tropicalis finished cDNA, clone TEgg038a23
          Length = 1035

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 248 aaagtggtgggctgtgccag 267
           ||||||||||||||||||||
Sbjct: 136 aaagtggtgggctgtgccag 155



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 165      caggaatgggttcaccaacc 184
                ||||||||||||||||||||
Sbjct: 26866107 caggaatgggttcaccaacc 26866126



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>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 142370

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    caggaatgggttcaccaacc 184
              ||||||||||||||||||||
Sbjct: 141904 caggaatgggttcaccaacc 141923



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>gb|AF021804.1|AF021804 Arabidopsis thaliana fatty acid hydroxylase Fah1p (FAH1) mRNA,
           complete cds
          Length = 714

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 aggaatgggttcaccaacccatcg 189
           ||||||||||||||||||| ||||
Sbjct: 77  aggaatgggttcaccaacctatcg 100



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>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete
              sequence
          Length = 222330

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 286    tctgctggctgtttgccaagtctattct 313
              ||||||||| ||| ||||||||||||||
Sbjct: 184873 tctgctggcagttggccaagtctattct 184900



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>emb|X74838.1|CECUT2 C.elegans cut-2 gene for cuticlin 2
          Length = 1589

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 504 cctcctgctggggcagcgat 523
           ||||||||||||||||||||
Sbjct: 963 cctcctgctggggcagcgat 944


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,196,693
Number of Sequences: 3902068
Number of extensions: 4196693
Number of successful extensions: 84252
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84090
Number of HSP's gapped (non-prelim): 160
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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