Clone Name | bah63a07 |
---|---|
Clone Library Name | barley_pub |
>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT) Length = 1616 Score = 381 bits (979), Expect = e-106 Identities = 192/228 (84%), Positives = 202/228 (88%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGVIPMDESKVVMKGRLGPGMMITVDL+TGQVLENTEVKK VASA PYGTWLQE TR IK Sbjct: 470 VGVIPMDESKVVMKGRLGPGMMITVDLQTGQVLENTEVKKTVASASPYGTWLQECTRLIK 529 Query: 183 PVNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 PVNF SS +MDNET+LRHQQAFGYSSEDVQMVIE+MASQGKEPTFCMGDDIPLAVLSQ+P Sbjct: 530 PVNFLSSTIMDNETVLRHQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAVLSQRP 589 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 H+L+DYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQV LSSPVLNE Sbjct: 590 HLLYDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVALSSPVLNE 649 Query: 543 GXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 G TYF+IRKGLDGSL+ I+ALCEEADAAVRS Sbjct: 650 GELETLLNDSKLKPKVLSTYFDIRKGLDGSLDKTIQALCEEADAAVRS 697
>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 1) Length = 1648 Score = 337 bits (864), Expect = 2e-92 Identities = 168/228 (73%), Positives = 190/228 (83%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGV+P+DE+KV MKGRLGPGMMI VDL GQV ENTEVKK ++S PYG W++E++R +K Sbjct: 504 VGVVPVDEAKVTMKGRLGPGMMIAVDLVNGQVYENTEVKKRISSFNPYGKWIKENSRFLK 563 Query: 183 PVNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 PVNF+SS VM+NE ILR QQAFGYSSEDVQMVIE+MASQGKEPTFCMGDDIPLA LSQ+P Sbjct: 564 PVNFKSSTVMENEEILRSQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAGLSQRP 623 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 HML+DYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILE+GPENA QV LS+PVLNE Sbjct: 624 HMLYDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILELGPENASQVILSNPVLNE 683 Query: 543 GXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 G TYF+IRKG++GSL+ A+ LCE AD AVRS Sbjct: 684 GALEELMKDQYLKPKVLSTYFDIRKGVEGSLQKALYYLCEAADDAVRS 731
>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC| 1.4.7.1) (Fd-GOGAT) Length = 1517 Score = 336 bits (861), Expect = 5e-92 Identities = 167/228 (73%), Positives = 190/228 (83%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGV+PMDESKV MKGRLGPGMMI+VDL +GQV ENTEVKK VAS+ PYG W++E+ RS+K Sbjct: 373 VGVLPMDESKVTMKGRLGPGMMISVDLSSGQVYENTEVKKRVASSNPYGKWVKENLRSLK 432 Query: 183 PVNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 VNF S +++N+TILR+QQAFGYSSEDVQMVIE+MASQGKEPTFCMGDDIPLAV+SQKP Sbjct: 433 AVNFLSRALLENDTILRNQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAVMSQKP 492 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 HML+DYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENA QV L SPVLNE Sbjct: 493 HMLYDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENASQVILPSPVLNE 552 Query: 543 GXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 G +F+IRKG++G+LE + LCE AD AVR+ Sbjct: 553 GELEALVNDPLLKAQMLPIFFDIRKGVEGTLEKRLNRLCEAADEAVRN 600
>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast| precursor (EC 1.4.7.1) (Fd-GOGAT 2) Length = 1629 Score = 322 bits (825), Expect = 7e-88 Identities = 159/228 (69%), Positives = 183/228 (80%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGV+PMDESKV MKGRLGPGMMI+VDLE GQV ENTEVKK VAS PYG W+ E+ R++K Sbjct: 480 VGVLPMDESKVTMKGRLGPGMMISVDLENGQVYENTEVKKRVASYNPYGKWVSENLRNLK 539 Query: 183 PVNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 P N+ SS +++ + LR QQAFGYSSEDVQMVIE+MA+QGKEPTFCMGDD P+AVLSQKP Sbjct: 540 PSNYLSSAILETDETLRRQQAFGYSSEDVQMVIESMAAQGKEPTFCMGDDTPVAVLSQKP 599 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 HML+DYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGP+N QV LS PVLNE Sbjct: 600 HMLYDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPQNVSQVVLSGPVLNE 659 Query: 543 GXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 T+F+IR+G++GSL+ + LCE AD AVR+ Sbjct: 660 RELEGLLGDPLLKSQILPTFFDIRRGIEGSLKKGLLKLCEAADEAVRN 707
>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1538 Score = 215 bits (548), Expect = 9e-56 Identities = 111/227 (48%), Positives = 151/227 (66%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKP 185 GV+ ++ S + KGRLGPG MI+VD+ + ++L N E+K +VA PYG L+ES + + Sbjct: 405 GVVQVEPSNIKSKGRLGPGQMISVDIISHKILNNKEIKTSVAGKTPYGDLLKESRQILGH 464 Query: 186 VNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKPH 365 F S ++++ +++ Q AFGY++EDV++VIE MASQGKEPTFCMGDDIPLA+LS+K H Sbjct: 465 QAFFSEQQVESKKLMQLQTAFGYTNEDVELVIEHMASQGKEPTFCMGDDIPLAILSEKSH 524 Query: 366 MLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNEG 545 +L+DYFKQRFAQVTNPAIDPLRE LVMSL + IG + N+L+ P A + L SP++NEG Sbjct: 525 ILYDYFKQRFAQVTNPAIDPLRESLVMSLTIQIGHKSNLLDDQPVLAKHIKLDSPIINEG 584 Query: 546 XXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 T F + KG + I+ LCE A A+ S Sbjct: 585 -ELNAILESKLSCAHINTIFKVEKG-PNDFKKQIEQLCESASQAILS 629
>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)| (FD-GOGAT) Length = 1556 Score = 206 bits (523), Expect = 7e-53 Identities = 111/230 (48%), Positives = 147/230 (63%), Gaps = 3/230 (1%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKP 185 GV+ + E +V KGRL PG MI VDL ++L+N ++K+ A PYG W++ +++ Sbjct: 405 GVVDLPEVDIVEKGRLAPGQMIAVDLAEQKILKNYQIKQQAAQKYPYGEWIKIQRQTVAS 464 Query: 186 VNFQSSPVM-DNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 +F + D +T+L+ Q AFGY++EDV+MV+ MASQGKEPTFCMGDD PLAVLS KP Sbjct: 465 DSFAEKTLFNDAQTVLQQQAAFGYTAEDVEMVVVPMASQGKEPTFCMGDDTPLAVLSHKP 524 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 +L+DYFKQRFAQVTNP IDPLRE LVMSL + +GKRGN+LE E+A + L SP++NE Sbjct: 525 RLLYDYFKQRFAQVTNPPIDPLRENLVMSLAMFLGKRGNLLEPKAESARTIKLRSPLVNE 584 Query: 543 GXXXXXXXXXXXXXXXXXTYFNIRKGLDG--SLENAIKALCEEADAAVRS 686 Y LDG SLE A+ L + A A V++ Sbjct: 585 VELQAIKTGQLQVAEVSTLY-----DLDGVNSLETALDNLVKTAIATVQA 629
>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1549 Score = 189 bits (481), Expect = 5e-48 Identities = 96/230 (41%), Positives = 142/230 (61%), Gaps = 3/230 (1%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKP 185 GV+ +D S + +KGRLGPG MI +DL+ ++ N E+K +AS +PY W++++ + + P Sbjct: 409 GVLNLDPSLIRLKGRLGPGEMIVLDLQEKLLMSNLEIKNKIASLRPYSDWIKQNRQVLIP 468 Query: 186 VNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKPH 365 +F +S + + + + Q FGY+SED+++VIE MA QGKEPTFCMGDD PLAVLS K H Sbjct: 469 TSFLTSTTLPLQEVFKRQTCFGYTSEDIELVIENMAIQGKEPTFCMGDDTPLAVLSGKSH 528 Query: 366 MLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNEG 545 +L+DYFKQRFAQVTNP ID LRE LVMS+ +G + N E E + + +P+L+E Sbjct: 529 VLYDYFKQRFAQVTNPPIDSLRESLVMSISSYLGSKTNSFEESSEKI--LKIKTPILSEN 586 Query: 546 XXXXXXXXXXXXXXXXXTY---FNIRKGLDGSLENAIKALCEEADAAVRS 686 T+ F+ + SL + I LC++A +++ Sbjct: 587 DLVLIKNSELLTETLVTTFEAHFDSPQANGQSLFSTINQLCKQAKNLIQA 636
>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (Fd-GOGAT) Length = 1536 Score = 182 bits (463), Expect = 6e-46 Identities = 90/179 (50%), Positives = 120/179 (67%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKP 185 GV ++ VV KGRLGPG M+ VDL VL+N +K+ ++ PY W+ + ++ Sbjct: 401 GVSNINSQNVVTKGRLGPGQMLCVDLSKNLVLDNWMIKQQISQKFPYKEWVNKYQSNLNL 460 Query: 186 VNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKPH 365 + + + D + R AFGY++EDV++VIE MAS KEPTF MGDD PL +LS+KPH Sbjct: 461 LEYLNDFTFDKVQMNRWHTAFGYTNEDVELVIEHMASSAKEPTFSMGDDTPLPILSEKPH 520 Query: 366 MLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLNE 542 +++DYFKQRFAQVTNPAIDPLRE LVMSL +G +GNILE A + L SP++NE Sbjct: 521 LIYDYFKQRFAQVTNPAIDPLRESLVMSLITYLGPKGNILEPTAIMAKSIKLESPIINE 579
>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1515 Score = 157 bits (396), Expect = 4e-38 Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 4/230 (1%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRS--- 176 G++ +DE++V+ KGRLGPG MI VDL++G++ + E+K ++A+ KP+ W+Q +T Sbjct: 406 GMVKIDETQVIEKGRLGPGEMIAVDLQSGKLYRDRELKDHLATLKPWDKWVQNTTHLDEL 465 Query: 177 IKPVNFQSSPV-MDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLS 353 +K + + P MD + R QQAFG + ED+++++ M GKE MGDD P+AVLS Sbjct: 466 VKTASLKGEPSDMDKAELRRRQQAFGLTMEDMELILHPMVEDGKEAIGSMGDDSPIAVLS 525 Query: 354 QKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPV 533 K L +F+Q F+QVTNP ID LRE VMSL+ +G GNIL+ + L SPV Sbjct: 526 DKYRGLHHFFRQNFSQVTNPPIDSLRERRVMSLKTRLGNLGNILDEDETQTRLLQLESPV 585 Query: 534 LNEGXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVR 683 L F + G + +L +A++ + +E + AVR Sbjct: 586 LTTAEFRAMRDYMGDTAAEIDATFPVDGGPE-ALRDALRRIRQETEDAVR 634
>GLTB_SYNY3 (P55037) Ferredoxin-dependent glutamate synthase 1 (EC 1.4.7.1)| (Fd-GOGAT) Length = 1550 Score = 155 bits (392), Expect = 1e-37 Identities = 85/228 (37%), Positives = 132/228 (57%), Gaps = 3/228 (1%) Frame = +3 Query: 6 GVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKP 185 GV+P++ +V KGRL PG M VD+E G+++ + E+K+ + S PYG WL + +S++ Sbjct: 414 GVLPIEPERVAKKGRLQPGRMFLVDMEQGRIIADEEIKQEIVSQHPYGEWLAANLKSLEQ 473 Query: 186 VNFQSS-PVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 + + P D E++ + Q AFGY+ E++++++ M G E MG D PLAVLS KP Sbjct: 474 LPSPGNVPGTDAESLRQRQMAFGYTFEELRILLAPMGRDGVEAIGSMGADTPLAVLSDKP 533 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVL-N 539 +L++YF+Q FAQVTNP ID +RE ++ S E IG GN+L+ PE+ + L +P+L N Sbjct: 534 KLLYNYFQQLFAQVTNPPIDSIREEIITSAETTIGGEGNLLDPRPESCRLIELKTPILTN 593 Query: 540 EG-XXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAV 680 E F+ +G + L+ A+ L EAD A+ Sbjct: 594 EDLAKLKALDDDEFKSVTLDILFDPNQG-EAGLKTALDNLFTEADQAI 640
>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC| 1.4.1.13) (Glutamate synthase alpha subunit) (NADPH-GOGAT) (GLTS alpha chain) Length = 1517 Score = 151 bits (382), Expect = 2e-36 Identities = 82/237 (34%), Positives = 133/237 (56%), Gaps = 9/237 (3%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VG+ +VV KGR+GPG ++ +D +G++L + E ++ S PY W++++ R + Sbjct: 406 VGIWDYQPDEVVEKGRVGPGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLV 465 Query: 183 PVNFQSSP-------VMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPL 341 P F+ P +D++T+ +Q+ F YS+E++ VI + G+E MGDD P Sbjct: 466 P--FEDLPDEEVGSRELDDDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPF 523 Query: 342 AVLSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTL 521 AVLS +P +++DYF+Q+FAQVTNP IDPLRE VMSL +IG+ N+ A +++ Sbjct: 524 AVLSSQPRIIYDYFRQQFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSF 583 Query: 522 SSPVL--NEGXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAAVRS 686 SP+L ++ F++ K +LE +K LC++A+ VRS Sbjct: 584 KSPILLYSDFKQLTTMKEEHYRADTLDITFDVTK---TTLEATVKELCDKAEKMVRS 637
>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)| (NADPH-GOGAT) Length = 1520 Score = 145 bits (366), Expect = 1e-34 Identities = 75/179 (41%), Positives = 110/179 (61%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGVI +++ V+ K RL PG M+ +DLE G+++ + EVK +A+ PY WL+E + Sbjct: 388 VGVIEVEQENVLYKNRLEPGKMLLIDLEEGRIISDEEVKTQIATEYPYQKWLEEELVQVN 447 Query: 183 PVNFQSSPVMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKP 362 P + +S +L Q+AFGY+ ED+Q + + +GK+P MG+D PLAVLS + Sbjct: 448 P-DPESREEEQFSDLLTRQKAFGYTYEDIQKYLIPVIKEGKDPLGSMGNDAPLAVLSDRA 506 Query: 363 HMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQVTLSSPVLN 539 LF+YFKQ FAQVTNP ID +RE LV S +G G++L N ++ L +PVL+ Sbjct: 507 QSLFNYFKQLFAQVTNPPIDAIREQLVTSTMTWLGAEGDLLHPSERNVRRIKLYTPVLS 565
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 145 bits (365), Expect = 1e-34 Identities = 83/241 (34%), Positives = 134/241 (55%), Gaps = 15/241 (6%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRS-- 176 VG + ++ ++V KGRL PG M+ VD + G+++++ E+K N+AS + +WL + Sbjct: 442 VGTVGIEPDRIVQKGRLYPGRMLLVDTKEGRIVDDKELKHNIASRYDFRSWLDQELIDMN 501 Query: 177 ------IKPVNFQSSPVMDNETIL--RHQQAFGYSSEDVQMVIETMASQGKEPTFCMGDD 332 I+ + +P++D+ + + AFGY+ E + M++ MA+ GKE MG+D Sbjct: 502 SIVDSLIESTSVDLTPIVDDVPLADDKTMLAFGYTLEQINMIMAPMANGGKETLGSMGND 561 Query: 333 IPLAVLSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPENADQ 512 +A LS +P +L+DYF+Q FAQVTNP IDP+RE +VMSL+ IG GN+LE+ + Sbjct: 562 AAIACLSDQPRLLYDYFRQLFAQVTNPPIDPIREAIVMSLQCYIGPSGNLLEINQSQCRR 621 Query: 513 VTLSSPVL-----NEGXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIKALCEEADAA 677 + + +P+L N T+F +G+ G AI+ +C EAD A Sbjct: 622 LRMPTPILTVEEFNALKNVDRIYPDWKVASIDITFFK-SEGVAG-YAAAIERICSEADTA 679 Query: 678 V 680 V Sbjct: 680 V 680
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 135 bits (339), Expect = 2e-31 Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 14/193 (7%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQE------ 164 VGVIP++ S VV KG+L PG +I D + G++++ ++K ++ + + +WL + Sbjct: 427 VGVIPIENSLVVQKGKLKPGDLIPSDTQLGEMVDTKKLKSQISKRQDFKSWLSKVIKLDD 486 Query: 165 ---STRSIKPVNFQSSP-----VMDNETILRHQQAFGYSSEDVQMVIETMASQGKEPTFC 320 T ++ P F S V + +L A GY+ E V ++ MA GKE Sbjct: 487 LLSKTANLVPKEFISQDSLSLKVQSDPRLL----ANGYTFEQVTFLLTPMALTGKEALGS 542 Query: 321 MGDDIPLAVLSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILEVGPE 500 MG+D PLA L++ P +L+DYF+Q FAQVTNP IDP+RE VMSLE +G +GN+LE+ Sbjct: 543 MGNDAPLACLNENPVLLYDYFRQLFAQVTNPPIDPIREANVMSLECYVGPQGNLLEMHSS 602 Query: 501 NADQVTLSSPVLN 539 D++ L SP+L+ Sbjct: 603 QCDRLLLKSPILH 615
>GLSN_MEDSA (Q03460) Glutamate synthase [NADH], chloroplast precursor (EC| 1.4.1.14) (NADH-GOGAT) Length = 2194 Score = 134 bits (338), Expect = 2e-31 Identities = 82/250 (32%), Positives = 125/250 (50%), Gaps = 24/250 (9%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGV+ + V KGRL PGMM+ VD E V+ + +K+ + A+PYG WL++ +K Sbjct: 476 VGVVDIPPEDVCRKGRLNPGMMLLVDFEKQIVVNDDALKEQYSLARPYGDWLEKQKIELK 535 Query: 183 ------------PVNFQSSPVMDNETI----------LRHQQAFGYSSEDVQMVIETMAS 296 P P + N+ + L +AFGYS E +++++ MA Sbjct: 536 DIIDSVHESDIVPPTISGVPPLSNDDVDMENMGIQGLLAPLKAFGYSVESLEILLLPMAK 595 Query: 297 QGKEPTFCMGDDIPLAVLSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRG 476 G E MG+D PLAV+S + + F+YFKQ FAQVTNP IDP+RE +V S+ +G G Sbjct: 596 DGVEALGSMGNDTPLAVMSNREKLTFEYFKQMFAQVTNPPIDPIREKIVTSMRCMVGPEG 655 Query: 477 NILEVGPENADQVTLSSPVLN--EGXXXXXXXXXXXXXXXXXTYFNIRKGLDGSLENAIK 650 ++ E E +++L P+L+ E ++ +G G LE A+ Sbjct: 656 DLTETTEEQCHRLSLKGPLLSTKEMEAIKKMNYRGWRSKVIDITYSKERGTKG-LEEALD 714 Query: 651 ALCEEADAAV 680 +C EA A+ Sbjct: 715 RICTEAHNAI 724
>GLTB_HORVU (Q08258) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)| (FD-GOGAT) (Fragment) Length = 435 Score = 130 bits (326), Expect = 5e-30 Identities = 64/64 (100%), Positives = 64/64 (100%) Frame = +3 Query: 3 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 182 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK Sbjct: 372 VGVIPMDESKVVMKGRLGPGMMITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIK 431 Query: 183 PVNF 194 PVNF Sbjct: 432 PVNF 435
>GLUS_METJA (Q58746) Glutamate synthase (EC 1.4.1.13)| Length = 510 Score = 33.1 bits (74), Expect = 0.82 Identities = 20/39 (51%), Positives = 22/39 (56%) Frame = +3 Query: 372 FDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRGNILE 488 FD QVTNP+IDPLRE M L IGK+ LE Sbjct: 110 FDKIVLDACQVTNPSIDPLRE--PMELRTYIGKKPKQLE 146
>GABR2_HUMAN (O75899) Gamma-aminobutyric acid type B receptor, subunit 2| precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2) (GABABR2) (G-protein coupled receptor 51) (HG20) Length = 941 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -3 Query: 302 PL*SHCFNYHLHIFTGIT---KCLLMSQNCFIVHDRRGLEVDRL 180 PL HC N H+ I+ GI K LLM CF+ + R + + L Sbjct: 643 PLLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETRNVSIPAL 686
>GABR2_RAT (O88871) Gamma-aminobutyric acid type B receptor, subunit 2| precursor (GABA-B receptor 2) (GABA-B-R2) (Gb2) (GABABR2) (G-protein coupled receptor 51) Length = 940 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = -3 Query: 302 PL*SHCFNYHLHIFTGIT---KCLLMSQNCFIVHDRRGLEVDRL 180 PL HC N H+ I+ GI K LLM CF+ + R + + L Sbjct: 642 PLLEHCENTHMTIWLGIVYAYKGLLMLFGCFLAWETRNVSIPAL 685
>MURC_LISIN (Q92BA4) UDP-N-acetylmuramate--L-alanine ligase (EC 6.3.2.8)| (UDP-N-acetylmuramoyl-L-alanine synthetase) Length = 447 Score = 30.4 bits (67), Expect = 5.3 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = +3 Query: 255 SSEDVQMVIETMASQGKEPTFCMGDDIPLAVLS-QKPHMLFDYFKQRFAQVTN 410 S +DV ET+ Q K+ F +GDD+ L LS P + F + + Q N Sbjct: 181 SVDDVFNAFETLGKQVKKAVFALGDDVELRKLSLDVPIIYFGFGSENEFQAKN 233
>FTSK_STRP1 (Q9A155) DNA translocase ftsK| Length = 801 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/102 (22%), Positives = 50/102 (49%) Frame = +3 Query: 69 ITVDLETGQVLENTEVKKNVASAKPYGTWLQESTRSIKPVNFQSSPVMDNETILRHQQAF 248 +TVD ETG+++E+++ + + A ++ T+ + + + S + D+ET L Q+ Sbjct: 237 LTVDPETGEIVEDSQSQVSYDLA-------EDMTKEPEILAYDSH-LKDDETSLFDQEDL 288 Query: 249 GYSSEDVQMVIETMASQGKEPTFCMGDDIPLAVLSQKPHMLF 374 Y+ E++ A E M + + + + K H+L+ Sbjct: 289 AYAHEEIGAYDSLSALASSEDEMDMDEPVEVD-FTPKTHLLY 329 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 98,324,789 Number of Sequences: 219361 Number of extensions: 1995519 Number of successful extensions: 4654 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4642 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)