ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Y12595.1|OSGOG2 O.sativa mRNA for Fd-GOGAT, partial, clone OsGog2 Length = 4120 Score = 846 bits (427), Expect = 0.0 Identities = 619/683 (90%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 66 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 125 Query: 62 aatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaa 121 |||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 126 aatgatgataacggttgacctacaaactggccaggtgcttgaaaacacagaagtgaagaa 185 Query: 122 aaatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaa 181 || |||||||||||| || ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 186 aagtgtggcttcagcgaacccctatggatcctggttgcagcaaagtacacgttcaataaa 245 Query: 182 gcctgtcaacttccaatcctctcctgtcatggacaatgaaacaattttgagacatcagca 241 ||||||||||||||| || ||| || |||||||||||||| | |||||||| ||||| Sbjct: 246 gcctgtcaacttccagtcatctgttgctatggacaatgaaacggtcttgagacaccagca 305 Query: 242 ggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagg 301 ||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 306 ggcctttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaagg 365 Query: 302 gaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcc 361 ||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 366 caaggaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagcc 425 Query: 362 acacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattga 421 ||||||| | |||||||||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 426 acacatgttatttgattatttcaaacagcgatttgcacaagttacaaatcctgctattga 485 Query: 422 tccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacat 481 ||| |||||||||||||| || |||||||||||||| || ||||||||||| |||| || Sbjct: 486 tcccctcagagaaggtttggttatgtctcttgaagtcaatattggtaaacggcgcaatat 545 Query: 482 cttggaggttggccctgaaaatgctgaccaggttaccctatcaagtcctgtgctgaatga 541 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 546 cttggaagttggccctgaaaatgctgatcaggttaccctatcaagtcctgtgcttaatga 605 Query: 542 aggtgaactagaatcactattgaaggacccaaaattgaagcccaaagtactatcgacata 601 |||||||||||||||||| ||||| ||| ||||| ||||||| |||||||| |||||||| Sbjct: 606 aggtgaactagaatcacttttgaatgactcaaaactgaagcctaaagtactctcgacata 665 Query: 602 cttcaatatccgtaaaggtctagatggttcccttgagaatgcaattaaggctctttgtga 661 |||| | ||||||||||||||||||||||||||||| || || ||||||| ||||||||| Sbjct: 666 cttcgacatccgtaaaggtctagatggttcccttgataaggctattaaggttctttgtga 725 Query: 662 agaagctgatgctgctgtgcgga 684 |||||||||||||||||||||| Sbjct: 726 tgaagctgatgctgctgtgcgga 748
>dbj|AK120896.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030A09, full insert sequence Length = 2448 Score = 846 bits (427), Expect = 0.0 Identities = 619/683 (90%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1489 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 1548 Query: 62 aatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaa 121 |||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 1549 aatgatgataacggttgacctacaaactggccaggtgcttgaaaacacagaagtgaagaa 1608 Query: 122 aaatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaa 181 || |||||||||||| || ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 1609 aagtgtggcttcagcgaacccctatggatcctggttgcagcaaagtacacgttcaataaa 1668 Query: 182 gcctgtcaacttccaatcctctcctgtcatggacaatgaaacaattttgagacatcagca 241 ||||||||||||||| || ||| || |||||||||||||| | |||||||| ||||| Sbjct: 1669 gcctgtcaacttccagtcatctgttgctatggacaatgaaacggtcttgagacaccagca 1728 Query: 242 ggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagg 301 ||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1729 ggcctttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaagg 1788 Query: 302 gaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcc 361 ||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1789 caaggaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagcc 1848 Query: 362 acacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattga 421 ||||||| | |||||||||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 1849 acacatgttatttgattatttcaaacagcgatttgcacaagttacaaatcctgctattga 1908 Query: 422 tccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacat 481 ||| |||||||||||||| || |||||||||||||| || ||||||||||| |||| || Sbjct: 1909 tcccctcagagaaggtttggttatgtctcttgaagtcaatattggtaaacggcgcaatat 1968 Query: 482 cttggaggttggccctgaaaatgctgaccaggttaccctatcaagtcctgtgctgaatga 541 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1969 cttggaagttggccctgaaaatgctgatcaggttaccctatcaagtcctgtgcttaatga 2028 Query: 542 aggtgaactagaatcactattgaaggacccaaaattgaagcccaaagtactatcgacata 601 |||||||||||||||||| ||||| ||| ||||| ||||||| |||||||| |||||||| Sbjct: 2029 aggtgaactagaatcacttttgaatgactcaaaactgaagcctaaagtactctcgacata 2088 Query: 602 cttcaatatccgtaaaggtctagatggttcccttgagaatgcaattaaggctctttgtga 661 |||| | ||||||||||||||||||||||||||||| || || ||||||| ||||||||| Sbjct: 2089 cttcgacatccgtaaaggtctagatggttcccttgataaggctattaaggttctttgtga 2148 Query: 662 agaagctgatgctgctgtgcgga 684 |||||||||||||||||||||| Sbjct: 2149 tgaagctgatgctgctgtgcgga 2171
>ref|XM_479407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4923 Score = 819 bits (413), Expect = 0.0 Identities = 616/683 (90%), Gaps = 3/683 (0%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1398 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 1457 Query: 62 aatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaa 121 |||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 1458 aatgatgataacggttgacctacaaactggccaggtgcttgaaaacacagaagtgaagaa 1517 Query: 122 aaatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaa 181 || |||||||||||| || ||||||||| | |||||||| ||||||||||||||||||| Sbjct: 1518 aagtgtggcttcagcgaacccctatggatcctggttgcagcaaagtacacgttcaataaa 1577 Query: 182 gcctgtcaacttccaatcctctcctgtcatggacaatgaaacaattttgagacatcagca 241 ||||||||||||||| || ||| || |||||||||||||| | |||||||| ||| Sbjct: 1578 gcctgtcaacttccagtcatctgttgctatggacaatgaaacggtcttgagacaccag-- 1635 Query: 242 ggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagg 301 || ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1636 -gcctttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaagg 1694 Query: 302 gaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcc 361 ||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||||| Sbjct: 1695 caaggaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagcc 1754 Query: 362 acacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattga 421 ||||||| | |||||||||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 1755 acacatgttatttgattatttcaaacagcgatttgcacaagttacaaatcctgctattga 1814 Query: 422 tccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacat 481 ||| |||||||||||||| || |||||||||||||| || ||||||||||| |||| || Sbjct: 1815 tcccctcagagaaggtttggttatgtctcttgaagtcaatattggtaaacggcgcaatat 1874 Query: 482 cttggaggttggccctgaaaatgctgaccaggttaccctatcaagtcctgtgctgaatga 541 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1875 cttggaagttggccctgaaaatgctgatcaggttaccctatcaagtcctgtgcttaatga 1934 Query: 542 aggtgaactagaatcactattgaaggacccaaaattgaagcccaaagtactatcgacata 601 |||||||||||||||||| ||||| ||| ||||| ||||||| |||||||| |||||||| Sbjct: 1935 aggtgaactagaatcacttttgaatgactcaaaactgaagcctaaagtactctcgacata 1994 Query: 602 cttcaatatccgtaaaggtctagatggttcccttgagaatgcaattaaggctctttgtga 661 |||| | ||||||||||||||||||||||||||||| || || ||||||| ||||||||| Sbjct: 1995 cttcgacatccgtaaaggtctagatggttcccttgataaggctattaaggttctttgtga 2054 Query: 662 agaagctgatgctgctgtgcgga 684 |||||||||||||||||||||| Sbjct: 2055 tgaagctgatgctgctgtgcgga 2077
>gb|M59190.1|MZEFEGLU Zea mays ferredoxin-dependent glutamate synthase mRNA, complete cds Length = 5617 Score = 749 bits (378), Expect = 0.0 Identities = 609/686 (88%) Strand = Plus / Plus Query: 3 gttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgga 62 |||||||||||||| ||||||||||| || ||||||||||||||| |||| ||||||||| Sbjct: 1735 gttggtgttataccaatggatgagtcaaaagtagtaatgaaaggacgattaggtcctgga 1794 Query: 63 atgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaaa 122 ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| |||||| Sbjct: 1795 atgatgataactgttgatctacagactggacaggtgcttgaaaacacagaagtaaagaaa 1854 Query: 123 aatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaag 182 | |||||||||||| | |||||||| ||||||||||||||| | ||||||| |||||| Sbjct: 1855 actgtggcttcagcgagcccctatgggacttggttgcaagaatgcacacgtttgataaag 1914 Query: 183 cctgtcaacttccaatcctctcctgtcatggacaatgaaacaattttgagacatcagcag 242 ||||||||||||| || || || ||||||||||||| || ||||||||||||| ||| Sbjct: 1915 cctgtcaacttcctctcttcaactatcatggacaatgagactgttttgagacatcaacag 1974 Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 1975 gcatttggctattcaagtgaagatgtgcaaatggtgattgaatcaatggcttcacaagga 2034 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||||||||| |||||||||||||||||||||||||| || || |||| ||| Sbjct: 2035 aaggaaccaacattttgtatgggcgatgacattccattagctgtattatcacaaagacca 2094 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgat 422 || || | | |||||||||||||||| | ||||| |||||||||||||||||||||||| Sbjct: 2095 catttgttatatgattatttcaagcagcggtttgcgcaggttacaaatcctgcaattgat 2154 Query: 423 ccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacatc 482 || || |||||||||||||| ||||||||||| ||||| ||||| ||| ||||||||||| Sbjct: 2155 ccccttagagaaggtttagttatgtctcttgaggttaatattgggaaaagaggcaacatc 2214 Query: 483 ttggaggttggccctgaaaatgctgaccaggttaccctatcaagtcctgtgctgaatgaa 542 |||||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||| Sbjct: 2215 ttggaggttggccctgaaaatgctgatcaggttgcactatcaagccctgtgctgaatgaa 2274 Query: 543 ggtgaactagaatcactattgaaggacccaaaattgaagcccaaagtactatcgacatac 602 |||||||| ||| | |||||||| ||| ||||| | |||||||||||||| || |||||| Sbjct: 2275 ggtgaactggaaactctattgaacgactcaaaacttaagcccaaagtactgtcaacatac 2334 Query: 603 ttcaatatccgtaaaggtctagatggttcccttgagaatgcaattaaggctctttgtgaa 662 ||| |||| |||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 2335 ttcgatattcgtaaaggtctagatggttcacttgataagacaattcaggctctttgtgaa 2394 Query: 663 gaagctgatgctgctgtgcggagtgg 688 |||||||||||||||||||||||||| Sbjct: 2395 gaagctgatgctgctgtgcggagtgg 2420
>gb|AY109539.1| Zea mays CL2484_1 mRNA sequence Length = 5572 Score = 603 bits (304), Expect = e-169 Identities = 499/564 (88%) Strand = Plus / Plus Query: 125 tgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaagcc 184 |||||||||||| | |||||||| ||||||||||||||| | ||||||| |||||||| Sbjct: 1857 tgtggcttcagcgagcccctatgggacttggttgcaagaatgcacacgtttgataaagcc 1916 Query: 185 tgtcaacttccaatcctctcctgtcatggacaatgaaacaattttgagacatcagcaggc 244 ||||||||||| || || || ||||||||||||| || ||||||||||||| ||||| Sbjct: 1917 tgtcaacttcctctcttcaactatcatggacaatgagactgttttgagacatcaacaggc 1976 Query: 245 atttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaa 304 |||||| ||||| |||||||||||||||||||| |||||| |||||||||||||||| || Sbjct: 1977 atttggctattcaagtgaagatgtgcaaatggtgattgaatcaatggcttcacaaggaaa 2036 Query: 305 ggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagccaca 364 ||| ||||||||||| |||||||||||||||||||||||||| || || |||| ||||| Sbjct: 2037 ggaaccaacattttgtatgggcgatgacattccattagctgtattatcacaaagaccaca 2096 Query: 365 catgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgatcc 424 || | | |||||||||||||||| | ||||| |||||||||||||||||||||||||| Sbjct: 2097 tttgttatatgattatttcaagcagcggtttgcgcaggttacaaatcctgcaattgatcc 2156 Query: 425 actcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacatctt 484 || |||||||||||||| ||||||||||| ||||| ||||| ||| ||||||||||||| Sbjct: 2157 ccttagagaaggtttagttatgtctcttgaggttaatattgggaaaagaggcaacatctt 2216 Query: 485 ggaggttggccctgaaaatgctgaccaggttaccctatcaagtcctgtgctgaatgaagg 544 |||||||||||||||||||||||| |||||| | |||||||| ||||||||||||||||| Sbjct: 2217 ggaggttggccctgaaaatgctgatcaggttgcactatcaagccctgtgctgaatgaagg 2276 Query: 545 tgaactagaatcactattgaaggacccaaaattgaagcccaaagtactatcgacatactt 604 |||||| ||| | |||||||| ||| ||||| | |||||||||||||| || |||||||| Sbjct: 2277 tgaactggaaactctattgaacgactcaaaacttaagcccaaagtactgtcaacatactt 2336 Query: 605 caatatccgtaaaggtctagatggttcccttgagaatgcaattaaggctctttgtgaaga 664 | |||| |||||||||||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 2337 cgatattcgtaaaggtctagatggttcacttgataagacaattcaggctctttgtgaaga 2396 Query: 665 agctgatgctgctgtgcggagtgg 688 |||||||||||||||||||||||| Sbjct: 2397 agctgatgctgctgtgcggagtgg 2420 Score = 117 bits (59), Expect = 5e-23 Identities = 86/95 (90%) Strand = Plus / Plus Query: 3 gttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgga 62 |||||||||||||| ||||||||||| || ||||||||||||||| |||| ||||||||| Sbjct: 1735 gttggtgttataccaatggatgagtcaaaagtagtaatgaaaggacgattaggtcctgga 1794 Query: 63 atgatgataacagttgacctagagactggtcaggt 97 ||||||||||| ||||| ||| ||||||| ||||| Sbjct: 1795 atgatgataactgttgatctacagactggacaggt 1829
>dbj|AK068130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132D11, full insert sequence Length = 3596 Score = 458 bits (231), Expect = e-125 Identities = 324/355 (91%) Strand = Plus / Plus Query: 330 gacattccattagctgtgttgtcgcaaaagccacacatgctctttgattatttcaagcag 389 ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| ||| Sbjct: 9 gacattccattagctgtgttgtcacaaaagccacacatgttatttgattatttcaaacag 68 Query: 390 agatttgcacaggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtct 449 |||||||||| |||||||||||||| |||||||| |||||||||||||| || |||||| Sbjct: 69 cgatttgcacaagttacaaatcctgctattgatcccctcagagaaggtttggttatgtct 128 Query: 450 cttgaagttaacattggtaaacgaggcaacatcttggaggttggccctgaaaatgctgac 509 |||||||| || ||||||||||| |||| |||||||| |||||||||||||||||||| Sbjct: 129 cttgaagtcaatattggtaaacggcgcaatatcttggaagttggccctgaaaatgctgat 188 Query: 510 caggttaccctatcaagtcctgtgctgaatgaaggtgaactagaatcactattgaaggac 569 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 189 caggttaccctatcaagtcctgtgcttaatgaaggtgaactagaatcacttttgaatgac 248 Query: 570 ccaaaattgaagcccaaagtactatcgacatacttcaatatccgtaaaggtctagatggt 629 ||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 249 tcaaaactgaagcctaaagtactctcgacatacttcgacatccgtaaaggtctagatggt 308 Query: 630 tcccttgagaatgcaattaaggctctttgtgaagaagctgatgctgctgtgcgga 684 |||||||| || || ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 309 tcccttgataaggctattaaggttctttgtgatgaagctgatgctgctgtgcgga 363
>gb|S58774.1| ferredoxin-dependent glutamate synthase [Hordeum vulgare=barley, cv. Maris Mink, mRNA Partial, 1311 nt] Length = 1311 Score = 375 bits (189), Expect = e-100 Identities = 192/193 (99%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 1178 Query: 62 aatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaa 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1179 aatgatgataacagttgacctagagactggtcaggtccttgaaaacaccgaagtgaagaa 1238 Query: 122 aaatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaa 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 aaatgtggcttcagcaaaaccctatggaacttggttgcaagaaagtacacgttcaataaa 1298 Query: 182 gcctgtcaacttc 194 ||||||||||||| Sbjct: 1299 gcctgtcaacttc 1311
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 236 bits (119), Expect = 8e-59 Identities = 161/175 (92%) Strand = Plus / Minus Query: 510 caggttaccctatcaagtcctgtgctgaatgaaggtgaactagaatcactattgaaggac 569 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 27677890 caggttaccctatcaagtcctgtgcttaatgaaggtgaactagaatcacttttgaatgac 27677831 Query: 570 ccaaaattgaagcccaaagtactatcgacatacttcaatatccgtaaaggtctagatggt 629 ||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 27677830 tcaaaactgaagcctaaagtactctcgacatacttcgacatccgtaaaggtctagatggt 27677771 Query: 630 tcccttgagaatgcaattaaggctctttgtgaagaagctgatgctgctgtgcgga 684 |||||||| || || ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 27677770 tcccttgataaggctattaaggttctttgtgatgaagctgatgctgctgtgcgga 27677716 Score = 204 bits (103), Expect = 3e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 246 tttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaag 305 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 27678468 tttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaaggcaag 27678409 Query: 306 gagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagccacac 365 || ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 27678408 gaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagccacac 27678349 Query: 366 atgctctttgattatttcaagcagagatttgcaca 400 ||| | |||||||||||||| ||| |||||||||| Sbjct: 27678348 atgttatttgattatttcaaacagcgatttgcaca 27678314 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Minus Query: 94 aggtccttgaaaacacagaagtgaagaaaaatgtggcttcagcaaaaccctatggaactt 153 |||| ||||||||||||||||||||||||| |||||||||||| || ||||||||| | | Sbjct: 27679511 aggtgcttgaaaacacagaagtgaagaaaagtgtggcttcagcgaacccctatggatcct 27679452 Query: 154 ggttgcaagaaagtacacgttcaataaagcctgtcaacttccaatcctctcctgtcatgg 213 ||||||| |||||||||||||||||||||||||||||||||| || ||| || |||| Sbjct: 27679451 ggttgcagcaaagtacacgttcaataaagcctgtcaacttccagtcatctgttgctatgg 27679392 Query: 214 acaatgaaacaattttgagacatcagcag 242 |||||||||| | |||||||| |||||| Sbjct: 27679391 acaatgaaacggtcttgagacaccagcag 27679363 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 27679696 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 27679637 Query: 62 aatgatgataacagttgacctagagactggtcaggt 97 |||||||||||| ||||||||| | ||||| ||||| Sbjct: 27679636 aatgatgataacggttgacctacaaactggccaggt 27679601 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 400 aggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagtta 459 |||||||||||||||| |||||||| |||||||||||||| || |||||||||||||| | Sbjct: 27678084 aggttacaaatcctgctattgatcccctcagagaaggtttggttatgtctcttgaagtca 27678025 Query: 460 acattggtaaacgaggcaacatcttggaggttggccctgaaaatgctgaccaggt 514 | ||||||||||| |||| |||||||| |||||||||||||||||||| ||||| Sbjct: 27678024 atattggtaaacggcgcaatatcttggaagttggccctgaaaatgctgatcaggt 27677970
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 236 bits (119), Expect = 8e-59 Identities = 161/175 (92%) Strand = Plus / Minus Query: 510 caggttaccctatcaagtcctgtgctgaatgaaggtgaactagaatcactattgaaggac 569 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 134883 caggttaccctatcaagtcctgtgcttaatgaaggtgaactagaatcacttttgaatgac 134824 Query: 570 ccaaaattgaagcccaaagtactatcgacatacttcaatatccgtaaaggtctagatggt 629 ||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 134823 tcaaaactgaagcctaaagtactctcgacatacttcgacatccgtaaaggtctagatggt 134764 Query: 630 tcccttgagaatgcaattaaggctctttgtgaagaagctgatgctgctgtgcgga 684 |||||||| || || ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 134763 tcccttgataaggctattaaggttctttgtgatgaagctgatgctgctgtgcgga 134709 Score = 204 bits (103), Expect = 3e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 246 tttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaag 305 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 135461 tttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaaggcaag 135402 Query: 306 gagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagccacac 365 || ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 135401 gaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagccacac 135342 Query: 366 atgctctttgattatttcaagcagagatttgcaca 400 ||| | |||||||||||||| ||| |||||||||| Sbjct: 135341 atgttatttgattatttcaaacagcgatttgcaca 135307 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Minus Query: 94 aggtccttgaaaacacagaagtgaagaaaaatgtggcttcagcaaaaccctatggaactt 153 |||| ||||||||||||||||||||||||| |||||||||||| || ||||||||| | | Sbjct: 136504 aggtgcttgaaaacacagaagtgaagaaaagtgtggcttcagcgaacccctatggatcct 136445 Query: 154 ggttgcaagaaagtacacgttcaataaagcctgtcaacttccaatcctctcctgtcatgg 213 ||||||| |||||||||||||||||||||||||||||||||| || ||| || |||| Sbjct: 136444 ggttgcagcaaagtacacgttcaataaagcctgtcaacttccagtcatctgttgctatgg 136385 Query: 214 acaatgaaacaattttgagacatcagcag 242 |||||||||| | |||||||| |||||| Sbjct: 136384 acaatgaaacggtcttgagacaccagcag 136356 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136689 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 136630 Query: 62 aatgatgataacagttgacctagagactggtcaggt 97 |||||||||||| ||||||||| | ||||| ||||| Sbjct: 136629 aatgatgataacggttgacctacaaactggccaggt 136594 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 400 aggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagtta 459 |||||||||||||||| |||||||| |||||||||||||| || |||||||||||||| | Sbjct: 135077 aggttacaaatcctgctattgatcccctcagagaaggtttggttatgtctcttgaagtca 135018 Query: 460 acattggtaaacgaggcaacatcttggaggttggccctgaaaatgctgaccaggt 514 | ||||||||||| |||| |||||||| |||||||||||||||||||| ||||| Sbjct: 135017 atattggtaaacggcgcaatatcttggaagttggccctgaaaatgctgatcaggt 134963
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 236 bits (119), Expect = 8e-59 Identities = 161/175 (92%) Strand = Plus / Minus Query: 510 caggttaccctatcaagtcctgtgctgaatgaaggtgaactagaatcactattgaaggac 569 |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 56992 caggttaccctatcaagtcctgtgcttaatgaaggtgaactagaatcacttttgaatgac 56933 Query: 570 ccaaaattgaagcccaaagtactatcgacatacttcaatatccgtaaaggtctagatggt 629 ||||| ||||||| |||||||| |||||||||||| | ||||||||||||||||||||| Sbjct: 56932 tcaaaactgaagcctaaagtactctcgacatacttcgacatccgtaaaggtctagatggt 56873 Query: 630 tcccttgagaatgcaattaaggctctttgtgaagaagctgatgctgctgtgcgga 684 |||||||| || || ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 56872 tcccttgataaggctattaaggttctttgtgatgaagctgatgctgctgtgcgga 56818 Score = 204 bits (103), Expect = 3e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 246 tttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaag 305 ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 57570 tttggatattcgagtgaagatgttcaaatggtaattgaaacaatggcttcacaaggcaag 57511 Query: 306 gagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagccacac 365 || ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||| Sbjct: 57510 gaaccaacattttgtatgggtgacgacattccattagctgtgttgtcacaaaagccacac 57451 Query: 366 atgctctttgattatttcaagcagagatttgcaca 400 ||| | |||||||||||||| ||| |||||||||| Sbjct: 57450 atgttatttgattatttcaaacagcgatttgcaca 57416 Score = 153 bits (77), Expect = 9e-34 Identities = 131/149 (87%) Strand = Plus / Minus Query: 94 aggtccttgaaaacacagaagtgaagaaaaatgtggcttcagcaaaaccctatggaactt 153 |||| ||||||||||||||||||||||||| |||||||||||| || ||||||||| | | Sbjct: 58613 aggtgcttgaaaacacagaagtgaagaaaagtgtggcttcagcgaacccctatggatcct 58554 Query: 154 ggttgcaagaaagtacacgttcaataaagcctgtcaacttccaatcctctcctgtcatgg 213 ||||||| |||||||||||||||||||||||||||||||||| || ||| || |||| Sbjct: 58553 ggttgcagcaaagtacacgttcaataaagcctgtcaacttccagtcatctgttgctatgg 58494 Query: 214 acaatgaaacaattttgagacatcagcag 242 |||||||||| | |||||||| |||||| Sbjct: 58493 acaatgaaacggtcttgagacaccagcag 58465 Score = 143 bits (72), Expect = 9e-31 Identities = 90/96 (93%) Strand = Plus / Minus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 58798 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 58739 Query: 62 aatgatgataacagttgacctagagactggtcaggt 97 |||||||||||| ||||||||| | ||||| ||||| Sbjct: 58738 aatgatgataacggttgacctacaaactggccaggt 58703 Score = 141 bits (71), Expect = 3e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 400 aggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagtta 459 |||||||||||||||| |||||||| |||||||||||||| || |||||||||||||| | Sbjct: 57186 aggttacaaatcctgctattgatcccctcagagaaggtttggttatgtctcttgaagtca 57127 Query: 460 acattggtaaacgaggcaacatcttggaggttggccctgaaaatgctgaccaggt 514 | ||||||||||| |||| |||||||| |||||||||||||||||||| ||||| Sbjct: 57126 atattggtaaacggcgcaatatcttggaagttggccctgaaaatgctgatcaggt 57072
>emb|AJ132280.1|OSA132280 Oryza sativa mRNA for ferredoxin dependent-glutamate synthase Fd-Gogat, partial Length = 1332 Score = 222 bits (112), Expect = 1e-54 Identities = 148/160 (92%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1173 ggttggtgttataccaatggatgagtcaaaggtagtaatgaaaggaagattgggtcctgg 1232 Query: 62 aatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtgaagaa 121 |||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||||||| Sbjct: 1233 aatgatgataacggttgacctacaaactggccaggtgcttgaaaacacagaagtgaagaa 1292 Query: 122 aaatgtggcttcagcaaaaccctatggaacttggttgcaa 161 || |||||||||||| || ||||||||| | ||||||||| Sbjct: 1293 aagtgtggcttcagcgaacccctatggatcctggttgcaa 1332
>gb|AF061515.1| Spinacia oleracea ferroxin-dependent glutamate synthase precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 5015 Score = 174 bits (88), Expect = 2e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 222 acaattttgagacatcagcaggcatttggttattccagtgaagatgtgcaaatggtaatt 281 |||||||| ||| | || ||||| ||||| || || ||||| ||||| |||||||| ||| Sbjct: 1336 acaattttaagaaaccaacaggcttttggctactcgagtgaggatgtccaaatggttatt 1395 Query: 282 gaaacaatggcttcacaagggaaggagccaacattttgcatgggcgatgacattccatta 341 |||| |||||||| ||||| |||||||| || ||||||||||| ||||| ||||| | Sbjct: 1396 gaaagtatggcttcccaaggtaaggagcctacgttttgcatgggagatgatattcctctg 1455 Query: 342 gctgtgttgtcgcaaaagccacacatgctctttgattatttcaagcagagatttgcacag 401 || || |||| || |||||||| ||||| | ||||||||||||||| ||||||| ||| Sbjct: 1456 gcagtaatgtctcagaagccacatatgctttatgattatttcaagcaacgatttgcccag 1515 Query: 402 gttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagttaac 461 |||||||| || || |||||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 1516 gttacaaacccagctattgatcctcttagggaaggattagtgatgtctcttgaggttaac 1575 Query: 462 attggtaaacgaggcaacatcttggaggttggccctgaaaatgc 505 |||||||| || || || || |||||||| || ||||||||||| Sbjct: 1576 attggtaagcgcgggaatattttggaggtcggacctgaaaatgc 1619
>gb|U03006.1|SOGOGAT Spinacia oleracea ferredoxin-dependent glutamate synthase mRNA, partial cds Length = 4948 Score = 174 bits (88), Expect = 2e-40 Identities = 235/284 (82%) Strand = Plus / Plus Query: 222 acaattttgagacatcagcaggcatttggttattccagtgaagatgtgcaaatggtaatt 281 |||||||| ||| | || ||||| ||||| || || ||||| ||||| |||||||| ||| Sbjct: 1231 acaattttaagaaaccaacaggcttttggctactcgagtgaggatgtccaaatggttatt 1290 Query: 282 gaaacaatggcttcacaagggaaggagccaacattttgcatgggcgatgacattccatta 341 |||| |||||||| ||||| |||||||| || ||||||||||| ||||| ||||| | Sbjct: 1291 gaaagtatggcttcccaaggtaaggagcctacgttttgcatgggagatgatattcctctg 1350 Query: 342 gctgtgttgtcgcaaaagccacacatgctctttgattatttcaagcagagatttgcacag 401 || || |||| || |||||||| ||||| | ||||||||||||||| ||||||| ||| Sbjct: 1351 gcagtaatgtctcagaagccacatatgctttatgattatttcaagcaacgatttgcccag 1410 Query: 402 gttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagttaac 461 |||||||| || || |||||||| || || ||||| ||||| ||||||||||| |||||| Sbjct: 1411 gttacaaacccagctattgatcctcttagggaaggattagtgatgtctcttgaggttaac 1470 Query: 462 attggtaaacgaggcaacatcttggaggttggccctgaaaatgc 505 |||||||| || || || || |||||||| || ||||||||||| Sbjct: 1471 attggtaagcgcgggaatattttggaggtcggacctgaaaatgc 1514
>ref|NM_129687.3| Arabidopsis thaliana GLU2 AT2G41220 (GLU2) mRNA, complete cds Length = 5253 Score = 170 bits (86), Expect = 4e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 240 caggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaa 299 ||||| ||||| || || ||||||||||| |||||||||||||| | |||||| ||||| Sbjct: 1675 caggcgtttggctactcgagtgaagatgttcaaatggtaattgagtcgatggctgcacaa 1734 Query: 300 gggaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaag 359 || || || ||||| ||||||||||| ||||| | |||| | || || ||||| |||||| Sbjct: 1735 ggaaaagaaccaacgttttgcatgggggatgatactccagtggcagtattgtctcaaaag 1794 Query: 360 ccacacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaatt 419 ||||| ||||| | |||||||||||||||| | ||||| |||||||||||||| || ||| Sbjct: 1795 ccacatatgctttatgattatttcaagcagcggtttgctcaggttacaaatccagctatt 1854 Query: 420 gatccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaac 479 || || ||| | ||||| ||||||||||| ||||||||||| ||||| || || || || Sbjct: 1855 gaccctctccgggaaggattagtcatgtcccttgaagttaatattggaaagcgtggaaat 1914 Query: 480 atcttggaggttgg 493 || ||||||||||| Sbjct: 1915 atattggaggttgg 1928 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 57 cctggaatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtg 116 ||||| ||||||||| | |||||| |||||| ||| ||||| ||| |||||||||||| Sbjct: 1492 cctggtatgatgatatctgttgacttagagaatggacaggtatatgagaacacagaagtg 1551 Query: 117 aagaa 121 ||||| Sbjct: 1552 aagaa 1556
>gb|U39288.1|ATU39288 Arabidopsis thaliana ferredoxin-dependent glutamate synthase precursor (GLU2) mRNA, complete cds Length = 5430 Score = 170 bits (86), Expect = 4e-39 Identities = 212/254 (83%) Strand = Plus / Plus Query: 240 caggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaa 299 ||||| ||||| || || ||||||||||| |||||||||||||| | |||||| ||||| Sbjct: 1947 caggcgtttggctactcgagtgaagatgttcaaatggtaattgagtcgatggctgcacaa 2006 Query: 300 gggaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaag 359 || || || ||||| ||||||||||| ||||| | |||| | || || ||||| |||||| Sbjct: 2007 ggaaaagaaccaacgttttgcatgggggatgatactccagtggcagtattgtctcaaaag 2066 Query: 360 ccacacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaatt 419 ||||| ||||| | |||||||||||||||| | ||||| |||||||||||||| || ||| Sbjct: 2067 ccacatatgctttatgattatttcaagcagcggtttgctcaggttacaaatccagctatt 2126 Query: 420 gatccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaac 479 || || ||| | ||||| ||||||||||| ||||||||||| ||||| || || || || Sbjct: 2127 gaccctctccgggaaggattagtcatgtcccttgaagttaatattggaaagcgtggaaat 2186 Query: 480 atcttggaggttgg 493 || ||||||||||| Sbjct: 2187 atattggaggttgg 2200 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 57 cctggaatgatgataacagttgacctagagactggtcaggtccttgaaaacacagaagtg 116 ||||| ||||||||| | |||||| |||||| ||| ||||| ||| |||||||||||| Sbjct: 1764 cctggtatgatgatatctgttgacttagagaatggacaggtatatgagaacacagaagtg 1823 Query: 117 aagaa 121 ||||| Sbjct: 1824 aagaa 1828
>ref|NM_180432.2| Arabidopsis thaliana GLU1 (FERREDOXIN-DEPENDENT GLUAMATE SYNTHASE 1) AT5G04140 (GLU1) transcript variant AT5G04140.2 mRNA, complete cds Length = 5199 Score = 157 bits (79), Expect = 6e-35 Identities = 217/263 (82%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | |||||||| ||||| Sbjct: 1750 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcttctcaagga 1809 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 1810 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 1869 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgat 422 || ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1870 catatgctttatgattatttcaaacaaagatttgcacaggttacaaaccctgccattgac 1929 Query: 423 ccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacatc 482 || || || |||||||| || |||||||||||||| || ||||| ||||| || || || Sbjct: 1930 ccccttagggaaggtttggttatgtctcttgaagtaaatattggaaaacgtggaaatata 1989 Query: 483 ttggaggttggccctgaaaatgc 505 |||||| |||| ||||| ||||| Sbjct: 1990 ttggagcttggacctgagaatgc 2012 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 2160 tctttgtgaagcagctgatgatgctgtccgaagtgg 2195
>ref|NM_120496.2| Arabidopsis thaliana GLU1 (FERREDOXIN-DEPENDENT GLUAMATE SYNTHASE 1) AT5G04140 (GLU1) transcript variant AT5G04140.1 mRNA, complete cds Length = 5304 Score = 157 bits (79), Expect = 6e-35 Identities = 217/263 (82%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | |||||||| ||||| Sbjct: 1851 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcttctcaagga 1910 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 1911 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 1970 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgat 422 || ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1971 catatgctttatgattatttcaaacaaagatttgcacaggttacaaaccctgccattgac 2030 Query: 423 ccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacatc 482 || || || |||||||| || |||||||||||||| || ||||| ||||| || || || Sbjct: 2031 ccccttagggaaggtttggttatgtctcttgaagtaaatattggaaaacgtggaaatata 2090 Query: 483 ttggaggttggccctgaaaatgc 505 |||||| |||| ||||| ||||| Sbjct: 2091 ttggagcttggacctgagaatgc 2113 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 2261 tctttgtgaagcagctgatgatgctgtccgaagtgg 2296
>gb|U39287.1|ATU39287 Arabidopsis thaliana ferredoxin-dependent glutamate synthase precursor (GLU1) mRNA, complete cds Length = 5303 Score = 157 bits (79), Expect = 6e-35 Identities = 217/263 (82%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | |||||||| ||||| Sbjct: 1850 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcttctcaagga 1909 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 1910 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 1969 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgat 422 || ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1970 catatgctttatgattatttcaaacaaagatttgcacaggttacaaaccctgccattgac 2029 Query: 423 ccactcagagaaggtttagtcatgtctcttgaagttaacattggtaaacgaggcaacatc 482 || || || |||||||| || |||||||||||||| || ||||| ||||| || || || Sbjct: 2030 ccccttagggaaggtttggttatgtctcttgaagtaaatattggaaaacgtggaaatata 2089 Query: 483 ttggaggttggccctgaaaatgc 505 |||||| |||| ||||| ||||| Sbjct: 2090 ttggagcttggacctgagaatgc 2112 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 2260 tctttgtgaagcagctgatgatgctgtccgaagtgg 2295
>emb|Y09667.1|ATFDGSYN A.thaliana mRNA for ferredoxin-dependent glutamate synthase Length = 5178 Score = 127 bits (64), Expect = 5e-26 Identities = 216/264 (81%), Gaps = 2/264 (0%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | ||||| || ||||| Sbjct: 1750 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcatctcaagga 1809 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 1810 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 1869 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgat 422 || ||||| | |||||||||||| || |||||||||||||||||||| ||||| ||||| Sbjct: 1870 catatgctttatgattatttcaaacaaagatttgcacaggttacaaaccctgccattgac 1929 Query: 423 ccactcagagaaggtttag-tcatgtctcttgaagttaacattggtaaacgaggcaacat 481 || || || |||||||| | | |||||||||||||| || ||||| ||||| || || || Sbjct: 1930 ccccttag-gaaggtttggtttatgtctcttgaagtaaatattggaaaacgtggaaatat 1988 Query: 482 cttggaggttggccctgaaaatgc 505 |||||| |||| ||||| ||||| Sbjct: 1989 attggagcttggacctgagaatgc 2012 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 2160 tctttgtgaagcagctgatgatgctgtccgaagtgg 2195
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 109 bits (55), Expect = 1e-20 Identities = 124/147 (84%) Strand = Plus / Minus Query: 258 agtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaaggagccaacattt 317 ||||||||||| |||||||||||||| | |||||| ||||||| || || ||||| ||| Sbjct: 90374 agtgaagatgttcaaatggtaattgagtcgatggctgcacaaggaaaagaaccaacgttt 90315 Query: 318 tgcatgggcgatgacattccattagctgtgttgtcgcaaaagccacacatgctctttgat 377 |||||||| ||||| | |||| | || || ||||| ||||||||||| ||||| | |||| Sbjct: 90314 tgcatgggggatgatactccagtggcagtattgtctcaaaagccacatatgctttatgat 90255 Query: 378 tatttcaagcagagatttgcacaggtt 404 |||||||||||| | ||||| |||||| Sbjct: 90254 tatttcaagcagcggtttgctcaggtt 90228 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 398 acaggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagt 457 ||||||||||||||| || ||||| || ||| | ||||| ||||||||||| |||||||| Sbjct: 90093 acaggttacaaatccagctattgaccctctccgggaaggattagtcatgtcccttgaagt 90034 Query: 458 taacattggtaaacgaggcaacatcttggaggttgg 493 ||| ||||| || || || || || ||||||||||| Sbjct: 90033 taatattggaaagcgtggaaatatattggaggttgg 89998
>gb|AC004261.3| Arabidopsis thaliana chromosome 2 clone T3K9 map CIC11C08, complete sequence Length = 91539 Score = 109 bits (55), Expect = 1e-20 Identities = 124/147 (84%) Strand = Plus / Minus Query: 258 agtgaagatgtgcaaatggtaattgaaacaatggcttcacaagggaaggagccaacattt 317 ||||||||||| |||||||||||||| | |||||| ||||||| || || ||||| ||| Sbjct: 4206 agtgaagatgttcaaatggtaattgagtcgatggctgcacaaggaaaagaaccaacgttt 4147 Query: 318 tgcatgggcgatgacattccattagctgtgttgtcgcaaaagccacacatgctctttgat 377 |||||||| ||||| | |||| | || || ||||| ||||||||||| ||||| | |||| Sbjct: 4146 tgcatgggggatgatactccagtggcagtattgtctcaaaagccacatatgctttatgat 4087 Query: 378 tatttcaagcagagatttgcacaggtt 404 |||||||||||| | ||||| |||||| Sbjct: 4086 tatttcaagcagcggtttgctcaggtt 4060 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 398 acaggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagt 457 ||||||||||||||| || ||||| || ||| | ||||| ||||||||||| |||||||| Sbjct: 3925 acaggttacaaatccagctattgaccctctccgggaaggattagtcatgtcccttgaagt 3866 Query: 458 taacattggtaaacgaggcaacatcttggaggttgg 493 ||| ||||| || || || || || ||||||||||| Sbjct: 3865 taatattggaaagcgtggaaatatattggaggttgg 3830
>gb|AF039851.1|AF039851 Glycine max ferredoxin-dependent glutamate synthase (glu) mRNA, partial cds Length = 3481 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Plus Query: 372 tttgattatttcaagcagagatttgcacaggttacaaatcctgcaattgatccactcaga 431 ||||||||||||||||| | |||||||||||||||||||||||||||||||| || || Sbjct: 4 tttgattatttcaagcaacggtttgcacaggttacaaatcctgcaattgatcctcttcga 63 Query: 432 gaaggtttagtcatgtctcttgaagttaacattgg 466 ||||| || || |||||||||||||| || ||||| Sbjct: 64 gaaggattggttatgtctcttgaagtgaatattgg 98
>emb|AL391716.1|ATF21E1 Arabidopsis thaliana DNA chromosome 5, BAC clone F21E1 (ESSA project) Length = 97451 Score = 97.6 bits (49), Expect = 5e-17 Identities = 133/161 (82%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | |||||||| ||||| Sbjct: 36439 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcttctcaagga 36498 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 36499 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 36558 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggt 403 || ||||| | |||||||||||| || |||||||||||||| Sbjct: 36559 catatgctttatgattatttcaaacaaagatttgcacaggt 36599 Score = 69.9 bits (35), Expect = 1e-08 Identities = 89/107 (83%) Strand = Plus / Plus Query: 399 caggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagtt 458 ||||||||||| ||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 36671 caggttacaaaccctgccattgacccccttagggaaggtttggttatgtctcttgaagta 36730 Query: 459 aacattggtaaacgaggcaacatcttggaggttggccctgaaaatgc 505 || ||||| ||||| || || || |||||| |||| ||||| ||||| Sbjct: 36731 aatattggaaaacgtggaaatatattggagcttggacctgagaatgc 36777 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 37014 tctttgtgaagcagctgatgatgctgtccgaagtgg 37049
>gb|AC147961.3| Medicago truncatula chromosome 7 BAC clone mth2-39i23, complete sequence Length = 131165 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Minus Query: 398 acaggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagt 457 ||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| Sbjct: 100563 acaggttacaaatcctgcaattgatccactccgagaagggttagttatgtctcttgaagt 100504 Score = 83.8 bits (42), Expect = 7e-13 Identities = 132/162 (81%) Strand = Plus / Minus Query: 242 ggcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaagg 301 ||||||||| || |||||||||||||| || ||||| || || | |||||||| ||||| Sbjct: 102104 ggcatttgggtactccagtgaagatgtccagatggtgatcgagtctatggcttctcaagg 102045 Query: 302 gaaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcc 361 ||||| || |||||||| ||||| ||||| |||||||| |||| || || || || || Sbjct: 102044 aaaggaacctacattttgtatgggagatgatattccattggctgcattatctcagaaacc 101985 Query: 362 acacatgctctttgattatttcaagcagagatttgcacaggt 403 |||||||| |||||||| || ||||| | ||||||||||| Sbjct: 101984 tcacatgctttttgattactttaagcaacggtttgcacaggt 101943
>gb|AY189525.1| Arabidopsis thaliana ferredoxin-dependent glutamate synthase gene, complete cds Length = 8628 Score = 89.7 bits (45), Expect = 1e-14 Identities = 132/161 (81%) Strand = Plus / Plus Query: 243 gcatttggttattccagtgaagatgtgcaaatggtaattgaaacaatggcttcacaaggg 302 |||||||||||||| ||||| |||||||||||||| ||||| | ||||| || ||||| Sbjct: 3211 gcatttggttattcaagtgaggatgtgcaaatggttattgagtctatggcatctcaagga 3270 Query: 303 aaggagccaacattttgcatgggcgatgacattccattagctgtgttgtcgcaaaagcca 362 ||||| ||||| || ||||||||||| || ||||| | || | ||||| |||| || Sbjct: 3271 aaggaaccaaccttctgcatgggcgacgatattccgctggcaggattgtctcaaagaccg 3330 Query: 363 cacatgctctttgattatttcaagcagagatttgcacaggt 403 || ||||| | |||||||||||| || |||||||||||||| Sbjct: 3331 catatgctttatgattatttcaaacaaagatttgcacaggt 3371 Score = 48.1 bits (24), Expect = 0.039 Identities = 89/108 (82%), Gaps = 2/108 (1%) Strand = Plus / Plus Query: 399 caggttacaaatcctgcaattgatccactcagagaaggtttagtc-atgtctcttgaagt 457 ||||||||||| ||||| ||||| || || || |||||||| || |||||||||||||| Sbjct: 3443 caggttacaaaccctgccattgacccccttag-gaaggtttggtttatgtctcttgaagt 3501 Query: 458 taacattggtaaacgaggcaacatcttggaggttggccctgaaaatgc 505 || ||||| ||||| || || || |||||| |||| ||||| ||||| Sbjct: 3502 aaatattggaaaacgtggaaatatattggagcttggacctgagaatgc 3549 Score = 40.1 bits (20), Expect = 9.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 653 tctttgtgaagaagctgatgctgctgtgcggagtgg 688 ||||||||||| |||||||| |||||| || ||||| Sbjct: 3697 tctttgtgaagcagctgatgatgctgtccgaagtgg 3732
>emb|X98542.1|VVGLUSYN2 V.vinifera mRNA for ferredoxin-dependent glutamate synthase (clone pGOGAT1) Length = 1020 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 2 ggttggtgttataccgatggatgagtcgaaggtagtaatgaaaggaagattgggtcctgg 61 |||||||||| |||||||||||||||| || || ||||||||||| | |||||||| || Sbjct: 780 ggttggtgttctaccgatggatgagtcaaaagttgtaatgaaaggccgtttgggtccagg 839 Query: 62 aatgatgata 71 |||||||||| Sbjct: 840 aatgatgata 849
>dbj|AP004474.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13B22, TM0009, complete sequence Length = 77319 Score = 71.9 bits (36), Expect = 3e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 398 acaggttacaaatcctgcaattgatccactcagagaaggtttagtcatgtctcttgaagt 457 |||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||| Sbjct: 76424 acaggtcacaaatcctgcaattgatcctcttcgagaaggattagttatgtctcttgaagt 76365
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Minus Query: 393 tttgcacaggttacaaatcctgcaattgatccactcagagaa 434 |||||||| |||||||||||| ||||||||||| |||||||| Sbjct: 1233385 tttgcacaagttacaaatcctccaattgatccaatcagagaa 1233344
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 374 tgattatttcaagcagagatttgcacaggttacaaatcctgcaattgatcc 424 ||||||||| || || ||||||||||||||||| ||||| || |||||||| Sbjct: 168797 tgattattttaaacaaagatttgcacaggttaccaatccagctattgatcc 168747
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 321 atgggcgatgacattccattagctgtgttgtcgcaaaagccacacatgctctttgattat 380 ||||| |||||||| |||||||| ||| | || ||||||||| || || | ||| ||| Sbjct: 1502933 atgggtgatgacatcccattagcagtgctttcatcaaagccacatattctatatgactat 1502992 Query: 381 ttcaagcagagatttgcacaggttacaaatcctgcaattgatccactcagagaa 434 |||||||| |||||||| || ||||| |||||| | ||||| || || |||||| Sbjct: 1502993 ttcaagcaaagatttgcgcaagttaccaatcctcctattgaccctctgagagaa 1503046
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 378 tatttcaagcagagatttgcacaggttacaaatcctgcaattgatccactcagagaa 434 |||||||| |||||||||||||| ||||| || || |||||||||| || |||||| Sbjct: 1019989 tatttcaaacagagatttgcacaagttaccaacccaccaattgatcctcttagagaa 1020045
>emb|Z21705.1|CHASGLTB Antithamnion sp. Chloroplast gltB and psaC genes encoding glutamate synthase and photosystem I protein Length = 5501 Score = 48.1 bits (24), Expect = 0.039 Identities = 63/76 (82%) Strand = Plus / Plus Query: 374 tgattatttcaagcagagatttgcacaggttacaaatcctgcaattgatccactcagaga 433 ||||||||| |||||| | |||||||| || || ||||||||||| ||||| | |||| Sbjct: 1885 tgattattttaagcagcgttttgcacaagtaactaatcctgcaatagatccgttacgaga 1944 Query: 434 aggtttagtcatgtct 449 | ||||||| |||||| Sbjct: 1945 aagtttagttatgtct 1960
>gb|AC004934.1| Homo sapiens PAC clone RP5-953B5 from 7, complete sequence Length = 126253 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 156 ttgcaagaaagtacacgttcaataaag 182 ||||||||||||||| ||||||||||| Sbjct: 6386 ttgcaagaaagtacatgttcaataaag 6360
>gb|AC154591.2| Mus musculus BAC clone RP23-370M19 from 16, complete sequence Length = 196385 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 102 gaaaacacagaagtgaagaaaaatgtg 128 ||||| ||||||||||||||||||||| Sbjct: 138239 gaaaagacagaagtgaagaaaaatgtg 138265
>gb|AC149304.11| Medicago truncatula clone mth2-76g4, complete sequence Length = 114831 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 gaaaacacagaagtgaagaaaaatgt 127 ||||||| |||||||||||||||||| Sbjct: 6742 gaaaacaaagaagtgaagaaaaatgt 6767
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ccacacatgctctttgattatt 381 |||||||||||||||||||||| Sbjct: 17503862 ccacacatgctctttgattatt 17503841
>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete sequence Length = 98950 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 cccaaaattgaagcccaaagta 590 |||||||||||||||||||||| Sbjct: 29402 cccaaaattgaagcccaaagta 29423
>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence Length = 127968 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 cccaaaattgaagcccaaagta 590 |||||||||||||||||||||| Sbjct: 103383 cccaaaattgaagcccaaagta 103404
>dbj|AP003054.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0436D06 Length = 148246 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ccacacatgctctttgattatt 381 |||||||||||||||||||||| Sbjct: 21434 ccacacatgctctttgattatt 21413
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 2634 cagaagtgaagaaaaatgtgg 2654
>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21 map R3342S, complete sequence Length = 133790 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 126333 cagaagtgaagaaaaatgtgg 126353 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 2825 cagaagtgaagaaaaatgtgg 2805
>gb|AC004417.1| Homo sapiens BAC clone CTA-325M7 from 7, complete sequence Length = 127514 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 ggtcctggaatgatgataaca 74 ||||||||||||||||||||| Sbjct: 109573 ggtcctggaatgatgataaca 109553
>gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete sequence Length = 120077 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 aaggtgaactagaatcactat 561 ||||||||||||||||||||| Sbjct: 64542 aaggtgaactagaatcactat 64562
>emb|AL356277.18| Human DNA sequence from clone RP11-554D15 on chromosome 6 Contains a pseudogene similar to part of ubiquinol-cytochrome c reductase core protein II (UQCRC2), a novel gene and the 3' ends of two novel genes, complete sequence Length = 181891 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 522 tcaagtcctgtgctgaatgaa 542 ||||||||||||||||||||| Sbjct: 164062 tcaagtcctgtgctgaatgaa 164042
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 27842847 cagaagtgaagaaaaatgtgg 27842867 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 27719339 cagaagtgaagaaaaatgtgg 27719319
>dbj|AK101888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070M12, full insert sequence Length = 3586 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 1156 cagaagtgaagaaaaatgtgg 1136
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 188 caacttccaatcctctcctgtcatggaca 216 ||||||| |||||||| |||||||||||| Sbjct: 1906 caacttcaaatcctcttctgtcatggaca 1878
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 ttcaagcagagatttgcacaggttacaaa 409 ||||| ||||| ||||||||||||||||| Sbjct: 1107294 ttcaaacagaggtttgcacaggttacaaa 1107322
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 27866835 cagaagtgaagaaaaatgtgg 27866855 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 cagaagtgaagaaaaatgtgg 129 ||||||||||||||||||||| Sbjct: 27743327 cagaagtgaagaaaaatgtgg 27743307
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 acacagaagtgaagaaaaat 125 |||||||||||||||||||| Sbjct: 106087 acacagaagtgaagaaaaat 106068
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tgcatgggcgatgacattcc 337 |||||||||||||||||||| Sbjct: 332180 tgcatgggcgatgacattcc 332199
>gb|AY484669.1| Rabbitpox virus, complete genome Length = 197731 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 66056 gaaggtgaactagaatcact 66037
>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence Length = 196756 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 caagtcctgtgctgaatgaaggtg 546 ||||||||||||||||||| |||| Sbjct: 138600 caagtcctgtgctgaatgagggtg 138623
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tacaaatcctgcaattgatc 423 |||||||||||||||||||| Sbjct: 1312503 tacaaatcctgcaattgatc 1312522
>gb|AC111058.10| Mus musculus chromosome 7, clone RP24-562C11, complete sequence Length = 211691 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 caagtcctgtgctgaatgaaggtg 546 ||||||||||||||||||| |||| Sbjct: 24044 caagtcctgtgctgaatgagggtg 24067
>gb|AE017261.1| Picrophilus torridus DSM 9790, complete genome Length = 1545895 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 630 tcccttgagaatgcaattaaggct 653 |||||||||||||| ||||||||| Sbjct: 123523 tcccttgagaatgccattaaggct 123500
>gb|AY313848.1| Vaccinia virus strain Acambis clone 3, complete genome Length = 197418 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 64219 gaaggtgaactagaatcact 64200
>gb|AY313847.1| Vaccinia virus strain Acambis clone 2000, complete genome Length = 199234 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 64156 gaaggtgaactagaatcact 64137
>gb|AY603355.1| Vaccinia virus strain Acambis 3000 Modified Virus Ankara (MVA), complete genome Length = 166722 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 50368 gaaggtgaactagaatcact 50349
>gb|DQ011157.1| Monkeypox virus strain USA_2003_039, complete genome Length = 198780 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61058 gaaggtgaactagaatcact 61039
>gb|DQ011156.1| Monkeypox virus strain Liberia_1970_184, complete genome Length = 200256 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61523 gaaggtgaactagaatcact 61504
>gb|DQ011155.1| Monkeypox virus strain Zaire_1979-005, complete genome Length = 196967 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61486 gaaggtgaactagaatcact 61467
>gb|DQ011154.1| Monkeypox virus strain Congo_2003_358, complete genome Length = 197195 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61508 gaaggtgaactagaatcact 61489
>gb|DQ011153.1| Monkeypox virus strain USA_2003_044, complete genome Length = 198780 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61058 gaaggtgaactagaatcact 61039
>gb|AY678277.1| Vaccinia virus strain LC16mO, complete genome Length = 189157 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 63945 gaaggtgaactagaatcact 63926
>gb|AY678276.1| Vaccinia virus strain Lister, complete genome Length = 189122 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 63824 gaaggtgaactagaatcact 63805
>gb|AY678275.1| Vaccinia virus strain LC16m8, complete genome Length = 189158 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 63945 gaaggtgaactagaatcact 63926
>gb|AY753185.1| Monkeypox virus strain COP-58, complete genome Length = 199469 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61290 gaaggtgaactagaatcact 61271
>gb|AY741551.1| Monkeypox virus isolate Sierra Leone, complete genome Length = 198756 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61051 gaaggtgaactagaatcact 61032
>gb|AY603973.1| Monkeypox virus strain MPXV-WRAIR7-61, complete genome Length = 199195 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61047 gaaggtgaactagaatcact 61028
>emb|CR318662.11| Zebrafish DNA sequence from clone CH211-213L7 in linkage group 10, complete sequence Length = 200648 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 catggacaatgaaacaattt 228 |||||||||||||||||||| Sbjct: 19186 catggacaatgaaacaattt 19167
>ref|XM_571609.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF04520) partial mRNA Length = 597 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tacaaatcctgcaattgatc 423 |||||||||||||||||||| Sbjct: 57 tacaaatcctgcaattgatc 76
>gb|AC127688.7| Mus musculus BAC clone RP24-200F13 from chromosome X, complete sequence Length = 162832 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 caggtccttgaaaacacagaagtg 116 |||||||||||||| ||||||||| Sbjct: 82932 caggtccttgaaaatacagaagtg 82955
>gb|DQ377945.1| Vaccinia virus strain 3737, complete genome Length = 199377 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 66730 gaaggtgaactagaatcact 66711
>gb|AC155344.1| Brassica rapa subsp. pekinensis clone KBrH080A08, complete sequence Length = 110038 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 aacacagaagtgaagaaaaatgtg 128 ||||||||||| |||||||||||| Sbjct: 12944 aacacagaagtaaagaaaaatgtg 12967
>gb|AF438165.1| Camelpox virus M-96 from Kazakhstan, complete genome Length = 205719 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 64169 gaaggtgaactagaatcact 64150
>gb|AC046136.12| Homo sapiens 3 BAC RP11-190P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 155827 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 111 gaagtgaagaaaaatgtggcttca 134 |||| ||||||||||||||||||| Sbjct: 68026 gaagagaagaaaaatgtggcttca 68049
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ttgattatttcaagcagaga 392 |||||||||||||||||||| Sbjct: 14409 ttgattatttcaagcagaga 14390
>emb|Y16780.1|VMVY16780 variola minor virus complete genome Length = 186986 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 53132 gaaggtgaactagaatcact 53113
>emb|X94355.2|CV41KBPL Cowpox virus strain GRI-90, complete genome Length = 223666 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 77556 gaaggtgaactagaatcact 77537
>emb|X69198.1|VVCGAA Variola virus DNA complete genome Length = 185578 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 52136 gaaggtgaactagaatcact 52117
>emb|X67119.1|VVHINDQKH Variola virus (HindIII-Q,K,H,M,L,I,F genome fragment) genes Length = 47780 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 2021 gaaggtgaactagaatcact 2002
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 651 gctctttgtgaagaagctga 670 |||||||||||||||||||| Sbjct: 2414426 gctctttgtgaagaagctga 2414445
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tctttgattatttcaagcag 389 |||||||||||||||||||| Sbjct: 1400203 tctttgattatttcaagcag 1400184
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5 Length = 262202 Score = 40.1 bits (20), Expect = 9.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 381 ttcaagcagagatttgcacaggttacaaatcctgcaattgatcc 424 ||||| || ||||||||||| ||||| |||||| | |||||||| Sbjct: 56703 ttcaaacaaagatttgcacaagttactaatcctcccattgatcc 56746
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ttgattatttcaagcagaga 392 |||||||||||||||||||| Sbjct: 152839 ttgattatttcaagcagaga 152820
>emb|AL606764.19| Mouse DNA sequence from clone RP23-412P21 on chromosome 13 Contains the gene for 2410030I24RIK protein similar to human SEC5 and the gene for Hus1 homolog (S. pombe) B (Hus1b), complete sequence Length = 127433 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 cactcagagaaggtttagtc 443 |||||||||||||||||||| Sbjct: 43407 cactcagagaaggtttagtc 43388
>gb|AC151463.2| Xenopus tropicalis BAC clone ISB1-164G24 containing troponin gene, complete cds, complete sequence Length = 86571 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 atttcaagcagagatttgcacagg 402 ||||||||| |||||||||||||| Sbjct: 58566 atttcaagctgagatttgcacagg 58543
>gb|AY009089.1| Camelpox virus CMS, complete genome Length = 202205 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 62379 gaaggtgaactagaatcact 62360
>gb|AC022015.6| Homo sapiens chromosome 10 clone RP11-153O5, complete sequence Length = 135198 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 gaaacaatggcttcacaagg 301 |||||||||||||||||||| Sbjct: 106316 gaaacaatggcttcacaagg 106335
>gb|M35027.1|VACCG Vaccinia virus Copenhagen, complete genome Length = 191737 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 64454 gaaggtgaactagaatcact 64435
>gb|AY243312.1| Vaccinia virus WR, complete genome Length = 194711 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61323 gaaggtgaactagaatcact 61304
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 306 gagccaacattttgcatgggcgatgacattcc 337 ||||| || ||||||||||| ||||||||||| Sbjct: 722629 gagccgaccttttgcatgggtgatgacattcc 722598
>gb|AY766183.1| Vaccinia virus strain ACAM1000, partial sequence Length = 201404 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 135519 gaaggtgaactagaatcact 135538
>gb|AC063938.13| Homo sapiens 3 BAC RP11-495I11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 94244 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 cacagaagtgaagaaaaatg 126 |||||||||||||||||||| Sbjct: 47642 cacagaagtgaagaaaaatg 47661
>gb|AC020551.5| Homo sapiens BAC clone RP11-404J23 from 4, complete sequence Length = 120038 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 aaaaatgtggcttcagcaaa 139 |||||||||||||||||||| Sbjct: 103231 aaaaatgtggcttcagcaaa 103212
>gb|AF380138.1|AF380138 Monkeypox virus strain Zaire-96-I-16, complete genome Length = 196858 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 61375 gaaggtgaactagaatcact 61356
>ref|XM_695429.1| PREDICTED: Danio rerio similar to FLJ10006 protein (LOC571801), partial mRNA Length = 1639 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 659 tgaagaagctgatgctgctg 678 |||||||||||||||||||| Sbjct: 1464 tgaagaagctgatgctgctg 1483
>ref|XM_691311.1| PREDICTED: Danio rerio similar to paxillin (LOC568000), mRNA Length = 1425 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 656 ttgtgaagaagctgatgctg 675 |||||||||||||||||||| Sbjct: 1011 ttgtgaagaagctgatgctg 992
>gb|AC026343.17| Homo sapiens 3 BAC RP11-384F7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168615 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ataaagcctgtcaacttcca 196 |||||||||||||||||||| Sbjct: 46547 ataaagcctgtcaacttcca 46566
>gb|AC131108.3| Mus musculus BAC clone RP23-351K24 from chromosome 16, complete sequence Length = 175409 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ataaagcctgtcaacttcca 196 |||||||||||||||||||| Sbjct: 46942 ataaagcctgtcaacttcca 46961
>gb|U94848.1| Vaccinia virus strain Ankara, complete genomic sequence Length = 177923 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 56158 gaaggtgaactagaatcact 56139
>emb|BX005197.11| Mouse DNA sequence from clone RP23-216H19 on chromosome X, complete sequence Length = 179460 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 caggtccttgaaaacacagaagtg 116 |||||||||||||| ||||||||| Sbjct: 48544 caggtccttgaaaatacagaagtg 48567
>gb|AC012170.6|AC012170 Homo sapiens chromosome 15 clone RP11-562A8 map 15q21.1, complete sequence Length = 198550 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 ttcccttgagaatgcaattaaggc 652 |||||||||||||| ||||||||| Sbjct: 47147 ttcccttgagaatggaattaaggc 47170
>gb|AC105398.3| Homo sapiens BAC clone RP11-656O12 from 2, complete sequence Length = 170262 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gtaatgaaaggaagattggg 55 |||||||||||||||||||| Sbjct: 121198 gtaatgaaaggaagattggg 121217
>gb|AC093910.2| Homo sapiens BAC clone RP11-762H11 from 2, complete sequence Length = 166731 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tagtaatgaaaggaagattg 53 |||||||||||||||||||| Sbjct: 37113 tagtaatgaaaggaagattg 37132
>gb|AC145987.2| Pan troglodytes BAC clone RP43-165D6 from chromosome 7, complete sequence Length = 158415 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gtcctggaatgatgataaca 74 |||||||||||||||||||| Sbjct: 108973 gtcctggaatgatgataaca 108954
>gb|AC010983.9| Homo sapiens BAC clone RP11-484E10 from 2, complete sequence Length = 189870 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tagtaatgaaaggaagattg 53 |||||||||||||||||||| Sbjct: 153687 tagtaatgaaaggaagattg 153706
>gb|AC063939.15| Homo sapiens 3 BAC RP11-373I6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180055 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tgaaacaattttgagacatc 237 |||||||||||||||||||| Sbjct: 59104 tgaaacaattttgagacatc 59085
>gb|AY965286.1| Synthetic construct clone VACV-WR_072 unknown gene Length = 888 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 598 gaaggtgaactagaatcact 617
>emb|X76263.1|VVL2L Variola virus (Garcia-1966) L2L,L3L,L4L,L5L,L6L,L7L and L8R genes Length = 6499 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 580 gaaggtgaactagaatcact 561
>gb|AF095689.1|AF095689 Vaccinia virus (strain Tian Tan) complete genome Length = 189274 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 60893 gaaggtgaactagaatcact 60874
>emb|AL162732.43| Human DNA sequence from clone RP11-32M23 on chromosome 9, complete sequence Length = 185353 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 ttccagtgaagatgtgcaaatggt 277 ||||||||||||| |||||||||| Sbjct: 160360 ttccagtgaagatatgcaaatggt 160383
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 agatttgcacaggttacaaatcct 413 ||||||||||| |||||||||||| Sbjct: 1531053 agatttgcacaagttacaaatcct 1531076
>emb|CT009697.13| Mouse DNA sequence from clone RP23-131H5 on chromosome 13, complete sequence Length = 225802 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 acaatgaaacaattttgaga 233 |||||||||||||||||||| Sbjct: 100896 acaatgaaacaattttgaga 100915
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete sequence Length = 207441 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 gcaggcatttggttattcca 258 |||||||||||||||||||| Sbjct: 157812 gcaggcatttggttattcca 157831
>gb|J03399.1|VACHIND3IG Vaccinia virus HindIII-I and G fragments Length = 15375 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 580 gaaggtgaactagaatcact 561
>emb|AL773538.7| Mouse DNA sequence from clone RP23-14I24 on chromosome 2, complete sequence Length = 178544 Score = 40.1 bits (20), Expect = 9.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 654 ctttgtgaagaagctgatgctgctgtgcggag 685 |||||||||||||||| ||| ||||||||||| Sbjct: 175586 ctttgtgaagaagctg-tgcggctgtgcggag 175616
>emb|AL831793.4| Mouse DNA sequence from clone RP23-9F23 on chromosome 4, complete sequence Length = 236470 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 caggtccttgaaaacacagaagtg 116 |||||||| ||||||||||||||| Sbjct: 199093 caggtcctagaaaacacagaagtg 199116
>gb|L22579.1|VARCG Variola major virus (strain Bangladesh-1975) complete genome Length = 186103 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 52769 gaaggtgaactagaatcact 52750
>gb|M57769.1|VACCH3 Chinese vaccinia virus I segment DNA fragment Length = 6498 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 gaaggtgaactagaatcact 559 |||||||||||||||||||| Sbjct: 580 gaaggtgaactagaatcact 561
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 306 gagccaacattttgcatgggcgatgacattcc 337 ||||| || ||||||||||| ||||||||||| Sbjct: 898236 gagccgaccttttgcatgggtgatgacattcc 898267
>emb|AL732357.3| Mouse DNA sequence from clone RP23-383K1 on chromosome 2, complete sequence Length = 101531 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 cctctcctgtcatggacaatgaaa 222 |||||||||||||||||| ||||| Sbjct: 72777 cctctcctgtcatggacactgaaa 72800
>emb|AL713980.9| Human DNA sequence from clone XXbac-81I18 on chromosome 6, complete sequence Length = 123817 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 ttcccttgagaatgcaattaaggc 652 |||||||||||||| ||||||||| Sbjct: 39737 ttcccttgagaatggaattaaggc 39760 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,808,413 Number of Sequences: 3902068 Number of extensions: 6808413 Number of successful extensions: 126879 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 126311 Number of HSP's gapped (non-prelim): 560 length of query: 688 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 665 effective length of database: 17,143,297,704 effective search space: 11400292973160 effective search space used: 11400292973160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
