>GLMM_GLUOX (Q5FQB4) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 452

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -3

Query: 387 PHEAPVEVAAALAGPDERQRAPERLLQLLHGV-PRLRLLHEVRGVELVHQVPDHL 226
           P  +P ++AAA A  DER     RL+    G  P +R++ E +   LVH+V DH+
Sbjct: 389 PMSSP-DLAAAKAWADERLAGSGRLVLRASGTEPLIRVMAEAQDEALVHEVVDHV 442

>VLDLR_CHICK (P98165) Very low-density lipoprotein receptor precursor (VLDL|
           receptor) (VLDL-R) (Vitellogenin receptor) (VTG
           receptor)
          Length = 863

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 450 PSPQLRRHHPHLGQAPQQTCSCSSTYFMQRGTGTCG 557
           P+PQ+  H      +P+ TC+C + YF+Q     CG
Sbjct: 741 PAPQINEH------SPKYTCTCPAGYFLQEDGLRCG 770

>MINT_HUMAN (Q96T58) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3664

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
 Frame = -3

Query: 498  EEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVAAALAGPDERQRAPE 319
            E+P   +G V V    +  +  G       +    P P  APV V   L  P        
Sbjct: 3208 EQPRAADGVVKVPPASKAPQQPGKEAAKTPDAKAAPTPTPAPVPVPVPLPAPAPAPHGEA 3267

Query: 318  RLLQL-----LHGVPRLRLLHEVRGVELVH 244
            R+L +     L G+P    +    GV++VH
Sbjct: 3268 RILTVTPSNQLQGLPLTPPVVVTHGVQIVH 3297

>PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101|
          Length = 758

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = -3

Query: 498 EEPDPGEGGVDVAEEREKLEVEGDLTLHLAELVGVPRPHEAPVEVAA-ALAGPDERQRAP 322
           +EP      +D A  R  ++++ D   H +       P   P   A  A AGPD+RQ A 
Sbjct: 558 DEPKLSSSVIDPALSRASVDMDEDAAPHRS-------PSSTPTPTATTAAAGPDDRQPAG 610

Query: 321 ERLLQLLHGVPRLRLLHEVR 262
           E+       V  +RLL  +R
Sbjct: 611 EQ-----QWVENVRLLQRLR 625

>MYSS_CYPCA (Q90339) Myosin heavy chain, fast skeletal muscle|
          Length = 1935

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
 Frame = +1

Query: 154  KMIADAA---QTVRRNRATCLQLARRAK----MIGDLMHQLHAAHLMQQPETRNPMEQLE 312
            K I DAA   + +++ + T   L R  K     + DL H+L  A  +     +  +++LE
Sbjct: 1758 KAITDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAESLAMKGGKKQLQKLE 1817

Query: 313  ETLRRALSLVRSCQRRG 363
              +R   + V + QRRG
Sbjct: 1818 SRVRELEAEVEAEQRRG 1834

>ODP2_PSEAE (Q59638) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 547

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 30/103 (29%), Positives = 37/103 (35%), Gaps = 19/103 (18%)
 Frame = -3

Query: 501 VEEPDPGEGGVDVAEEREKLEV-EGDLTLHLAELVGVPRPHEAPVEVAAALAGPDERQR- 328
           +E P P  G V+    +   EV  GDL L L      P   E P    A  A P   Q+ 
Sbjct: 162 MEIPSPASGVVESVSIKVGDEVGTGDLILKLKVEGAAPAAEEQPAAAPAQAAAPAAEQKP 221

Query: 327 -----------------APERLLQLLHGVPRLRLLHEVRGVEL 250
                            AP R    +H  P +R+L    GVEL
Sbjct: 222 AAAAPAPAKADTPAPVGAPSRDGAKVHAGPAVRMLAREFGVEL 264

>RAPG_BACSU (O32294) Response regulator aspartate phosphatase G (EC 3.1.-.-)|
          Length = 365

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -3

Query: 342 DERQRAPERLLQLLHGVPRLRLLHEVRGVELVHQVPDHLGAAREL 208
           D+   A   LL+L H V    LLHE RG    H+ P H+ A  ++
Sbjct: 45  DQEVLAYFSLLELRHKV----LLHEARGQGFQHEEPSHMNATSDM 85

>BIOD_BACSU (P53558) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin|
           synthase) (DTB synthetase) (DTBS)
          Length = 231

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -3

Query: 426 LTLHLAELVGVPRPHEAPVEVAAALAGPDERQRAPERLLQLLHGVPRLRLLHEVRGV--- 256
           LT+  AE +G+P    A + +      PDE ++    +++ L GVP L +  ++  V   
Sbjct: 154 LTVKYAESMGLPI---AGIIINGISDSPDEDEKTNPEMIERLCGVPILGVTPKLANVTKE 210

Query: 255 ELVHQVPDHL 226
            ++H V DH+
Sbjct: 211 TVLHMVKDHI 220

>BIOD_BACNA (Q8KZM8) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin|
           synthase) (DTB synthetase) (DTBS)
          Length = 231

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
 Frame = -3

Query: 426 LTLHLAELVGVPRPHEAPVEVAAALAGPDERQRAPERLLQLLHGVPRLRLLHEVRGV--- 256
           LT+  AE +G+P    A + +      PDE ++    +++ L GVP L +  ++  V   
Sbjct: 154 LTVKYAESMGLPI---AGIIINGISDSPDEDEKTNPEMIERLCGVPILGVTPKLANVTKE 210

Query: 255 ELVHQVPDHL 226
            ++H V DH+
Sbjct: 211 TVLHMVKDHI 220

>SDC3_RAT (P33671) Syndecan-3 precursor (SYND3) (N-syndecan) (Neuroglycan)|
          Length = 442

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 12  RPPPPLGTLAGSAPPRLILNQTKIRNGSS 98
           +P PPLGTL   A P L L+   I +GSS
Sbjct: 342 KPSPPLGTLPKGARPGLGLHDNAIDSGSS 370

>SDC3_MOUSE (Q64519) Syndecan-3 precursor (SYND3)|
          Length = 442

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +3

Query: 12  RPPPPLGTLAGSAPPRLILNQTKIRNGSS 98
           +P PPLGTL   A P L L+   I +GSS
Sbjct: 342 KPSPPLGTLPKGARPGLGLHDNAIDSGSS 370

>LEPA_SYMTH (Q67S76) GTP-binding protein lepA|
          Length = 603

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
 Frame = +1

Query: 361 GYLYRC-FMGARHADELREVQGEITFYLQLF---PLLSY-VDTTLTWVRLLNKPAPAPQP 525
           G+ +RC F+G  H D ++E + E  F L L    P + Y V+ T     ++  PA  P P
Sbjct: 338 GFGFRCGFLGLLHMDVIQE-RLEREFDLNLITTAPNVVYRVNMTSGEQIMIENPANWPDP 396

Query: 526 TSCKEAQAPVVRPYFV-PDEW 585
           +  +  + PVVR   + P E+
Sbjct: 397 SKIESVEEPVVRASIITPTEY 417

>GLMM_ZYMMO (Q5NNT4) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 445

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 366 VAAALAGPDERQRAPERLLQLLHGV-PRLRLLHEVRGVELVHQVPDHL 226
           V  A++  +E  +   RLL    G  P +R++ E    +LVHQ+ DH+
Sbjct: 390 VCEAISEAEESLKGKGRLLIRKSGTEPLIRVMAEAEDPDLVHQIVDHI 437


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,386,835
Number of Sequences: 219361
Number of extensions: 1476443
Number of successful extensions: 6459
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6448
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)