ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah62l06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 272 1e-69
2dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
3dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
4dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
5dbj|AK062564.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 272 1e-69
7emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 272 1e-69
8ref|NM_118589.2| Arabidopsis thaliana UBP16 (UBIQUITIN-SPECIFIC ... 48 0.034
9emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, ... 48 0.034
10emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, B... 48 0.034
11gb|AF302666.1|AF302666 Arabidopsis thaliana ubiquitin-specific p... 48 0.034
12gb|AC096684.3| Takifugu rubripes clone 241N7, complete sequence 46 0.14
13gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence 46 0.14
14gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 44 0.54
15gb|AC124659.10| Mus musculus chromosome 15, clone RP24-167K18, c... 42 2.1
16gb|AC091396.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.1
17gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, comple... 42 2.1
18gb|BC051037.1| Mus musculus murinoglobulin 1, mRNA (cDNA clone M... 40 8.4
19ref|NM_008645.2| Mus musculus murinoglobulin 1 (Mug1), mRNA 40 8.4
20gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.4
21ref|XM_974532.1| PREDICTED: Mus musculus similar to murinoglobul... 40 8.4
22ref|XR_002817.1| PREDICTED: Mus musculus similar to murinoglobul... 40 8.4
23ref|XM_987710.1| PREDICTED: Mus musculus similar to murinoglobul... 40 8.4
24ref|XM_917532.2| PREDICTED: Mus musculus similar to murinoglobul... 40 8.4
25gb|BC036299.1| Mus musculus, clone IMAGE:4195167, mRNA 40 8.4
26gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosom... 40 8.4
27emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 i... 40 8.4
28gb|AC130890.4| Homo sapiens X BAC RP11-450G14 (Roswell Park Canc... 40 8.4
29gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence 40 8.4
30gb|AC146761.6| Pan troglodytes clone ptb-54f16, complete sequence 40 8.4
31gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Canc... 40 8.4
32dbj|AK144541.1| Mus musculus adult male gall bladder cDNA, RIKEN... 40 8.4
33dbj|AK144255.1| Mus musculus cDNA, RIKEN full-length enriched li... 40 8.4
34gb|AC093669.4| Homo sapiens BAC clone RP11-540E16 from 4, comple... 40 8.4
35gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, compl... 40 8.4
36dbj|AK149376.1| Mus musculus adult male liver tumor cDNA, RIKEN ... 40 8.4
37gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosom... 40 8.4
38emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 i... 40 8.4
39ref|NM_063657.1| Caenorhabditis elegans WEE homolog family membe... 40 8.4
40dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
41gb|AY211267.1| Chlamydomonas reinhardtii zeaxanthin epoxidase pr... 40 8.4
42ref|XM_395573.2| PREDICTED: Apis mellifera similar to CG12822-PA... 40 8.4
43dbj|AB158770.1| Amphidinium carterae plastid psbC mRNA for photo... 40 8.4
44dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome 40 8.4
45dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
46emb|BX248325.7| Zebrafish DNA sequence from clone CH211-233I11 i... 40 8.4
47dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
48emb|BX119975.7| Zebrafish DNA sequence from clone CH211-200A16 i... 40 8.4
49emb|Z36752.1|CEF35H8 Caenorhabditis elegans Cosmid F35H8, comple... 40 8.4
50emb|AL049832.3|CNS0000G Human chromosome 14 DNA sequence BAC R-6... 40 8.4
51gb|BC049868.1| Mus musculus cDNA clone IMAGE:5097177, containing... 40 8.4
52gb|AC125530.4| Mus musculus BAC clone RP23-387J8 from 6, complet... 40 8.4
53emb|Z75743.1|HSLUCA9 Human DNA sequence from clone XXcos-9 on ch... 40 8.4
54emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 8.4
55gb|M65736.1|MUSMURINC Mouse murinoglobulin mRNA, complete cds 40 8.4
56dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IG... 40 8.4 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                            
Query: 19       gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
                ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 21696249 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 21696308

                                                                            
Query: 79       gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
                || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 21696309 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 21696368

                                                                            
Query: 139      acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
                || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 21696369 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 21696428

                                                                            
Query: 199      ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
                ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 21696429 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 21696488

                                                 
Query: 259      gaaatctctgcattcttggaccagagggaaaag 291
                |||||||||||||| ||||| ||||||||||||
Sbjct: 21696489 gaaatctctgcatttttggatcagagggaaaag 21696521



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 333      ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
                |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 21696932 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 21696983
to top
>dbj|AK069200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009A08, full
            insert sequence
          Length = 2554

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                        
Query: 19   gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
            ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 1116 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 1175

                                                                        
Query: 79   gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
            || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 1176 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 1235

                                                                        
Query: 139  acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
            || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 1236 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 1295

                                                                        
Query: 199  ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
            ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 1296 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 1355

                                             
Query: 259  gaaatctctgcattcttggaccagagggaaaag 291
            |||||||||||||| ||||| ||||||||||||
Sbjct: 1356 gaaatctctgcatttttggatcagagggaaaag 1388



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 333  ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
            |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 1799 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 1850
to top
>dbj|AK067367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B18, full
            insert sequence
          Length = 3861

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                        
Query: 19   gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
            ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 1109 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 1168

                                                                        
Query: 79   gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
            || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 1169 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 1228

                                                                        
Query: 139  acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
            || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 1229 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 1288

                                                                        
Query: 199  ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
            ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 1289 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 1348

                                             
Query: 259  gaaatctctgcattcttggaccagagggaaaag 291
            |||||||||||||| ||||| ||||||||||||
Sbjct: 1349 gaaatctctgcatttttggatcagagggaaaag 1381



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 333  ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
            |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 1792 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 1843
to top
>dbj|AK065699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037H04, full
            insert sequence
          Length = 2068

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                        
Query: 19   gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
            ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 1116 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 1175

                                                                        
Query: 79   gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
            || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 1176 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 1235

                                                                        
Query: 139  acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
            || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 1236 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 1295

                                                                        
Query: 199  ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
            ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 1296 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 1355

                                             
Query: 259  gaaatctctgcattcttggaccagagggaaaag 291
            |||||||||||||| ||||| ||||||||||||
Sbjct: 1356 gaaatctctgcatttttggatcagagggaaaag 1388



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 333  ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
            |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 1799 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 1850
to top
>dbj|AK062564.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F04, full
           insert sequence
          Length = 1800

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                       
Query: 19  gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
           ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 344 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 403

                                                                       
Query: 79  gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
           || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 404 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 463

                                                                       
Query: 139 acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
           || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 464 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 523

                                                                       
Query: 199 ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
           ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 524 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 583

                                            
Query: 259 gaaatctctgcattcttggaccagagggaaaag 291
           |||||||||||||| ||||| ||||||||||||
Sbjct: 584 gaaatctctgcatttttggatcagagggaaaag 616



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                
Query: 333  ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
            |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 1027 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 1078
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Plus

                                                                            
Query: 19       gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
                ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 21624594 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 21624653

                                                                            
Query: 79       gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
                || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 21624654 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 21624713

                                                                            
Query: 139      acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
                || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 21624714 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 21624773

                                                                            
Query: 199      ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
                ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 21624774 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 21624833

                                                 
Query: 259      gaaatctctgcattcttggaccagagggaaaag 291
                |||||||||||||| ||||| ||||||||||||
Sbjct: 21624834 gaaatctctgcatttttggatcagagggaaaag 21624866



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                                    
Query: 333      ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
                |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 21625277 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 21625328
to top
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 186030

 Score =  272 bits (137), Expect = 1e-69
 Identities = 239/273 (87%)
 Strand = Plus / Minus

                                                                          
Query: 19     gaaggattcctcccaagggaagaggaagcagcggcactgtttacccttatcgggcattcc 78
              ||||||||||| || || |||||||| |||| |||| |||| ||||||||||| ||||| 
Sbjct: 116302 gaaggattccttcccagagaagaggaggcagtggcattgttcacccttatcggacattct 116243

                                                                          
Query: 79     gcgctggaagttggtcaagaggtaacggtgaaagtattgaatgtagcacgaggccaggtc 138
              || ||||||||||||||| |||||| ||||||||||||||| |||| |||||||||||||
Sbjct: 116242 gcactggaagttggtcaacaggtaagggtgaaagtattgaacgtagtacgaggccaggtc 116183

                                                                          
Query: 139    acattgacaatgaaggggggagaagatgatgaagacgagttgtcgtcgttaaacaccaac 198
              || ||||||||||||| |||||||||||||||||| ||  || | || ||||||||  | 
Sbjct: 116182 acgttgacaatgaaggagggagaagatgatgaagaggatctggcttcattaaacacacag 116123

                                                                          
Query: 199    ctgaagcagggatggtccagagggaccaacgctttcgagttagctttccgtaggagcaag 258
              ||||||||||| ||||||||||||||||| || || ||| |||||||||||||||  |||
Sbjct: 116122 ctgaagcagggttggtccagagggaccaatgcatttgagctagctttccgtaggaataag 116063

                                               
Query: 259    gaaatctctgcattcttggaccagagggaaaag 291
              |||||||||||||| ||||| ||||||||||||
Sbjct: 116062 gaaatctctgcatttttggatcagagggaaaag 116030



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                  
Query: 333    ttcagtttcaacttctggggttgaaagcacagttgacgacaagctcgttgag 384
              |||||||  ||||||||  | ||| ||||||||||| ||||| |||||||||
Sbjct: 115619 ttcagttgaaacttctgaagatgatagcacagttgatgacaaactcgttgag 115568
to top
>ref|NM_118589.2| Arabidopsis thaliana UBP16 (UBIQUITIN-SPECIFIC PROTEASE 16);
            cysteine-type endopeptidase/ ubiquitin thiolesterase/
            ubiquitin-specific protease AT4G24560 (UBP16) mRNA,
            complete cds
          Length = 3721

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 149  tgaaggggggagaagatgatgaagacga 176
            ||||||||||||||||||| ||||||||
Sbjct: 3355 tgaaggggggagaagatgaggaagacga 3328
to top
>emb|AL161561.2|ATCHRIV61 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 61
          Length = 198402

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 149    tgaaggggggagaagatgatgaagacga 176
              ||||||||||||||||||| ||||||||
Sbjct: 147284 tgaaggggggagaagatgaggaagacga 147311
to top
>emb|AL035356.1|ATF22K18 Arabidopsis thaliana DNA chromosome 4, BAC clone  F22K18 (ESSAII project)
          Length = 125803

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 149    tgaaggggggagaagatgatgaagacga 176
              ||||||||||||||||||| ||||||||
Sbjct: 101626 tgaaggggggagaagatgaggaagacga 101599
to top
>gb|AF302666.1|AF302666 Arabidopsis thaliana ubiquitin-specific protease 16 (UBP16) mRNA,
            complete cds
          Length = 3318

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 149  tgaaggggggagaagatgatgaagacga 176
            ||||||||||||||||||| ||||||||
Sbjct: 2968 tgaaggggggagaagatgaggaagacga 2941
to top
>gb|AC096684.3| Takifugu rubripes clone 241N7, complete sequence
          Length = 84793

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 155  ggggagaagatgatgaagacgag 177
            |||||||||||||||||||||||
Sbjct: 1996 ggggagaagatgatgaagacgag 2018
to top
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence
          Length = 74841

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 155   ggggagaagatgatgaagacgag 177
             |||||||||||||||||||||||
Sbjct: 69530 ggggagaagatgatgaagacgag 69552
to top
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 537     ctacagtttctgctattgaagttgaa 562
               |||||||||||| |||||||||||||
Sbjct: 1921980 ctacagtttctggtattgaagttgaa 1921955
to top
>gb|AC124659.10| Mus musculus chromosome 15, clone RP24-167K18, complete sequence
          Length = 180859

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 299   ctccagaagtgaaaacagaag 319
             |||||||||||||||||||||
Sbjct: 70620 ctccagaagtgaaaacagaag 70640
to top
>gb|AC091396.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-298M8, complete
              sequence
          Length = 237142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 132    ccaggtcacattgacaatgaa 152
              |||||||||||||||||||||
Sbjct: 209181 ccaggtcacattgacaatgaa 209161
to top
>gb|AC122835.3| Mus musculus BAC clone RP23-187I18 from 3, complete sequence
          Length = 218449

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   agacttcagtttcaacttctg 349
             |||||||||||||||||||||
Sbjct: 51641 agacttcagtttcaacttctg 51621
to top
>gb|BC051037.1| Mus musculus murinoglobulin 1, mRNA (cDNA clone MGC:58950
            IMAGE:4195193), complete cds
          Length = 4672

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3375 atgaaggggggagtagatgatgaa 3398
to top
>ref|NM_008645.2| Mus musculus murinoglobulin 1 (Mug1), mRNA
          Length = 4672

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3375 atgaaggggggagtagatgatgaa 3398
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 428     aagctgtcactggtgccgtt 447
               ||||||||||||||||||||
Sbjct: 3841848 aagctgtcactggtgccgtt 3841867
to top
>ref|XM_974532.1| PREDICTED: Mus musculus similar to murinoglobulin 1 (LOC669343),
           mRNA
          Length = 1868

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 148 atgaaggggggagaagatgatgaa 171
           ||||||||||||| ||||||||||
Sbjct: 583 atgaaggggggagtagatgatgaa 606
to top
>ref|XR_002817.1| PREDICTED: Mus musculus similar to murinoglobulin 1 (LOC640530), mRNA
          Length = 4840

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3277 atgaaggggggagtagatgatgaa 3300
to top
>ref|XM_987710.1| PREDICTED: Mus musculus similar to murinoglobulin 1 (LOC640530), mRNA
          Length = 4737

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3400 atgaaggggggagtagatgatgaa 3423
to top
>ref|XM_917532.2| PREDICTED: Mus musculus similar to murinoglobulin 1 (LOC640530), mRNA
          Length = 5055

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3277 atgaaggggggagtagatgatgaa 3300
to top
>gb|BC036299.1| Mus musculus, clone IMAGE:4195167, mRNA
          Length = 4623

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3321 atgaaggggggagtagatgatgaa 3344
to top
>gb|AC163283.3| Mus musculus BAC clone RP23-405A16 from chromosome 12, complete sequence
          Length = 197540

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    gcattcttggaccagaggga 287
              ||||||||||||||||||||
Sbjct: 148105 gcattcttggaccagaggga 148124
to top
>emb|BX548069.7| Zebrafish DNA sequence from clone CH211-238G23 in linkage group 18,
             complete sequence
          Length = 142514

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   acagaagctgtcactggtgc 443
             ||||||||||||||||||||
Sbjct: 96938 acagaagctgtcactggtgc 96919
to top
>gb|AC130890.4| Homo sapiens X BAC RP11-450G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 76801

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gggaagaggaagcagcggca 54
             ||||||||||||||||||||
Sbjct: 59135 gggaagaggaagcagcggca 59116
to top
>gb|AC093572.18| Pan troglodytes clone rp43-25g23, complete sequence
          Length = 195652

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    tgaagcagggatggtccaga 219
              ||||||||||||||||||||
Sbjct: 183435 tgaagcagggatggtccaga 183416
to top
>gb|AC146761.6| Pan troglodytes clone ptb-54f16, complete sequence
          Length = 153907

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  tgaagcagggatggtccaga 219
            ||||||||||||||||||||
Sbjct: 8580 tgaagcagggatggtccaga 8561
to top
>gb|AC157667.11| Mus musculus 6 BAC RP24-86B22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 206878

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tggaagttggtcaagaggta 102
             ||||||||||||||||||||
Sbjct: 47560 tggaagttggtcaagaggta 47541
to top
>dbj|AK144541.1| Mus musculus adult male gall bladder cDNA, RIKEN full-length enriched
            library, clone:G630093A09 product:murinoglobulin 1, full
            insert sequence
          Length = 4612

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3333 atgaaggggggagtagatgatgaa 3356
to top
>dbj|AK144255.1| Mus musculus cDNA, RIKEN full-length enriched library,
            clone:G630001M04 product:murinoglobulin 1, full insert
            sequence
          Length = 4618

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3339 atgaaggggggagtagatgatgaa 3362
to top
>gb|AC093669.4| Homo sapiens BAC clone RP11-540E16 from 4, complete sequence
          Length = 96120

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   acagaagttgagactgagac 332
             ||||||||||||||||||||
Sbjct: 78645 acagaagttgagactgagac 78626
to top
>gb|AC093158.2| Homo sapiens chromosome 1 clone RP11-439H8, complete sequence
          Length = 179582

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 395    aagttgaaagcaaagaggat 414
              ||||||||||||||||||||
Sbjct: 107975 aagttgaaagcaaagaggat 107994
to top
>dbj|AK149376.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched
            library, clone:C730002N16 product:murinoglobulin 1, full
            insert sequence
          Length = 3849

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3598 atgaaggggggagtagatgatgaa 3621
to top
>gb|AC155312.2| Mus musculus BAC clone RP23-411F11 from chromosome 12, complete
             sequence
          Length = 197795

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   gcattcttggaccagaggga 287
             ||||||||||||||||||||
Sbjct: 54240 gcattcttggaccagaggga 54259
to top
>emb|BX470077.5| Zebrafish DNA sequence from clone CH211-136P17 in linkage group 5,
             complete sequence
          Length = 165851

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 148   atgaaggggggagaagatgatgaa 171
             |||||||| |||||||||||||||
Sbjct: 37754 atgaagggaggagaagatgatgaa 37777
to top
>ref|NM_063657.1| Caenorhabditis elegans WEE homolog family member (wee-1.1) (wee-1.1)
            mRNA, complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 159  agaagatgatgaagacgagt 178
            ||||||||||||||||||||
Sbjct: 1263 agaagatgatgaagacgagt 1282
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 286      gaaaaggttactgctccaga 305
                ||||||||||||||||||||
Sbjct: 10874139 gaaaaggttactgctccaga 10874158
to top
>gb|AY211267.1| Chlamydomonas reinhardtii zeaxanthin epoxidase precursor (ZEP1) gene,
            complete cds; nuclear gene for chloroplast product
          Length = 6369

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  agctcttcaacagaagctgt 434
            ||||||||||||||||||||
Sbjct: 1022 agctcttcaacagaagctgt 1003
to top
>ref|XM_395573.2| PREDICTED: Apis mellifera similar to CG12822-PA, isoform A
            (LOC412107), partial mRNA
          Length = 1786

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    cctgatggagaagaaggatt 26
            ||||||||||||||||||||
Sbjct: 1271 cctgatggagaagaaggatt 1290
to top
>dbj|AB158770.1| Amphidinium carterae plastid psbC mRNA for photosystem II CP43
           protein, partial cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 552 ttgaagttgaaagcaaagag 571
           ||||||||||||||||||||
Sbjct: 345 ttgaagttgaaagcaaagag 326
to top
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome
          Length = 3573470

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     gaagctgtcactggtgccgt 446
               ||||||||||||||||||||
Sbjct: 1588465 gaagctgtcactggtgccgt 1588446
to top
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   gaaaaggttactgctccaga 305
             ||||||||||||||||||||
Sbjct: 97862 gaaaaggttactgctccaga 97881
to top
>emb|BX248325.7| Zebrafish DNA sequence from clone CH211-233I11 in linkage group 9,
              complete sequence
          Length = 157207

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     gggaagaggaagcagcggca 54
              ||||||||||||||||||||
Sbjct: 126664 gggaagaggaagcagcggca 126645
to top
>dbj|AP005400.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0698G06
          Length = 138282

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   gaaaaggttactgctccaga 305
             ||||||||||||||||||||
Sbjct: 13844 gaaaaggttactgctccaga 13863
to top
>emb|BX119975.7| Zebrafish DNA sequence from clone CH211-200A16 in linkage group 8,
             complete sequence
          Length = 154904

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   agctcttcaacagaagctgt 434
             ||||||||||||||||||||
Sbjct: 44489 agctcttcaacagaagctgt 44508
to top
>emb|Z36752.1|CEF35H8 Caenorhabditis elegans Cosmid F35H8, complete sequence
          Length = 38383

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   agaagatgatgaagacgagt 178
             ||||||||||||||||||||
Sbjct: 31855 agaagatgatgaagacgagt 31836
to top
>emb|AL049832.3|CNS0000G Human chromosome 14 DNA sequence BAC R-63D17 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177172

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  ggagaagatgatgaagacga 176
            ||||||||||||||||||||
Sbjct: 3135 ggagaagatgatgaagacga 3154
to top
>gb|BC049868.1| Mus musculus cDNA clone IMAGE:5097177, containing frame-shift errors
          Length = 4667

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3371 atgaaggggggagtagatgatgaa 3394
to top
>gb|AC125530.4| Mus musculus BAC clone RP23-387J8 from 6, complete sequence
          Length = 200068

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   tggaagttggtcaagaggta 102
            ||||||||||||||||||||
Sbjct: 9923 tggaagttggtcaagaggta 9942
to top
>emb|Z75743.1|HSLUCA9 Human DNA sequence from clone XXcos-9 on chromosome 3, complete
             sequence
          Length = 24055

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    aggaagcagcggcactgttt 60
             ||||||||||||||||||||
Sbjct: 19107 aggaagcagcggcactgttt 19088
to top
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 471     tgaagttgaaagcaaagaggagga 494
               ||||||||| ||||||||||||||
Sbjct: 1800895 tgaagttgagagcaaagaggagga 1800872
to top
>gb|M65736.1|MUSMURINC Mouse murinoglobulin mRNA, complete cds
          Length = 4597

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 148  atgaaggggggagaagatgatgaa 171
            ||||||||||||| ||||||||||
Sbjct: 3316 atgaaggggggagtagatgatgaa 3339
to top
>dbj|AP000353.2| Homo sapiens genomic DNA, chromosome 22q11.2, IGLL region,
             clone:KB318B8
          Length = 123828

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 200   tgaagcagggatggtccaga 219
             ||||||||||||||||||||
Sbjct: 28278 tgaagcagggatggtccaga 28297


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,672,388
Number of Sequences: 3902068
Number of extensions: 5672388
Number of successful extensions: 123165
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122869
Number of HSP's gapped (non-prelim): 296
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top