Clone Name | bah63a05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_185166.1| Oryza sativa (japonica cultivar-group), mRNA Length = 966 Score = 133 bits (67), Expect = 7e-28 Identities = 156/188 (82%) Strand = Plus / Plus Query: 378 cctgagcaggtggactggattgggcagaagaatcagatcgatgccgccaaagcagccggt 437 |||||||||||||| |||||||| || ||||||||||| || | |||||||| || || Sbjct: 325 cctgagcaggtggattggattggccaaaagaatcagattgacactgccaaagctgctgga 384 Query: 438 gtgaagcacatagtgttggttggatccatnnnnnnnacaaaccccaaccatcctctcaac 497 |||||||| || ||| | || |||||||| ||||| || |||||||| || ||| Sbjct: 385 gtgaagcatatcgtgcttgtgggatccatgggaggaacaaatcctaaccatccactgaac 444 Query: 498 agccttggcaatggcaacatattggtctggaagcgcaagtctgaacagtatctggcagac 557 ||||| ||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||| Sbjct: 445 agcctaggcaatggcaatatactggtttggaagcgcaagtcagaacagtatttggcagac 504 Query: 558 agtggagt 565 |||||||| Sbjct: 505 agtggagt 512 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgtt 127 |||| ||||||||||||||||||||||||||||||||||||||||||| | || || | Sbjct: 15 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggaaacattgtcta 74 Query: 128 caacaagctcagggacagatccgaccagtt 157 ||||||||||| ||| || || |||||||| Sbjct: 75 caacaagctcaaggaaaggtctgaccagtt 104
>dbj|AK104209.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C03, full insert sequence Length = 1036 Score = 133 bits (67), Expect = 7e-28 Identities = 156/188 (82%) Strand = Plus / Plus Query: 378 cctgagcaggtggactggattgggcagaagaatcagatcgatgccgccaaagcagccggt 437 |||||||||||||| |||||||| || ||||||||||| || | |||||||| || || Sbjct: 429 cctgagcaggtggattggattggccaaaagaatcagattgacactgccaaagctgctgga 488 Query: 438 gtgaagcacatagtgttggttggatccatnnnnnnnacaaaccccaaccatcctctcaac 497 |||||||| || ||| | || |||||||| ||||| || |||||||| || ||| Sbjct: 489 gtgaagcatatcgtgcttgtgggatccatgggaggaacaaatcctaaccatccactgaac 548 Query: 498 agccttggcaatggcaacatattggtctggaagcgcaagtctgaacagtatctggcagac 557 ||||| ||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||| Sbjct: 549 agcctaggcaatggcaatatactggtttggaagcgcaagtcagaacagtatttggcagac 608 Query: 558 agtggagt 565 |||||||| Sbjct: 609 agtggagt 616 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgtt 127 |||| ||||||||||||||||||||||||||||||||||||||||||| | || || | Sbjct: 119 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggaaacattgtcta 178 Query: 128 caacaagctcagggacagatccgaccagtt 157 ||||||||||| ||| || || |||||||| Sbjct: 179 caacaagctcaaggaaaggtctgaccagtt 208
>dbj|AK104151.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-E08, full insert sequence Length = 1076 Score = 133 bits (67), Expect = 7e-28 Identities = 156/188 (82%) Strand = Plus / Plus Query: 378 cctgagcaggtggactggattgggcagaagaatcagatcgatgccgccaaagcagccggt 437 |||||||||||||| |||||||| || ||||||||||| || | |||||||| || || Sbjct: 429 cctgagcaggtggattggattggccaaaagaatcagattgacactgccaaagctgctgga 488 Query: 438 gtgaagcacatagtgttggttggatccatnnnnnnnacaaaccccaaccatcctctcaac 497 |||||||| || ||| | || |||||||| ||||| || |||||||| || ||| Sbjct: 489 gtgaagcatatcgtgcttgtgggatccatgggaggaacaaatcctaaccatccactgaac 548 Query: 498 agccttggcaatggcaacatattggtctggaagcgcaagtctgaacagtatctggcagac 557 ||||| ||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||| Sbjct: 549 agcctaggcaatggcaatatactggtttggaagcgcaagtcagaacagtatttggcagac 608 Query: 558 agtggagt 565 |||||||| Sbjct: 609 agtggagt 616 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgtt 127 |||| ||||||||||||||||||||||||||||||||||||||||||| | || || | Sbjct: 119 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggaaacattgtcta 178 Query: 128 caacaagctcagggacagatccgaccagtt 157 ||||||||||| ||| || || |||||||| Sbjct: 179 caacaagctcaaggaaaggtctgaccagtt 208
>dbj|AK069405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023017D04, full insert sequence Length = 1088 Score = 133 bits (67), Expect = 7e-28 Identities = 156/188 (82%) Strand = Plus / Plus Query: 378 cctgagcaggtggactggattgggcagaagaatcagatcgatgccgccaaagcagccggt 437 |||||||||||||| |||||||| || ||||||||||| || | |||||||| || || Sbjct: 441 cctgagcaggtggattggattggccaaaagaatcagattgacactgccaaagctgctgga 500 Query: 438 gtgaagcacatagtgttggttggatccatnnnnnnnacaaaccccaaccatcctctcaac 497 |||||||| || ||| | || |||||||| ||||| || |||||||| || ||| Sbjct: 501 gtgaagcatatcgtgcttgtgggatccatgggaggaacaaatcctaaccatccactgaac 560 Query: 498 agccttggcaatggcaacatattggtctggaagcgcaagtctgaacagtatctggcagac 557 ||||| ||||||||||| ||| |||| |||||||||||||| ||||||||| |||||||| Sbjct: 561 agcctaggcaatggcaatatactggtttggaagcgcaagtcagaacagtatttggcagac 620 Query: 558 agtggagt 565 |||||||| Sbjct: 621 agtggagt 628 Score = 91.7 bits (46), Expect = 2e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgtt 127 |||| ||||||||||||||||||||||||||||||||||||||||||| | || || | Sbjct: 131 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggaaacattgtcta 190 Query: 128 caacaagctcagggacagatccgaccagtt 157 ||||||||||| ||| || || |||||||| Sbjct: 191 caacaagctcaaggaaaggtctgaccagtt 220
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34225081 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 34225033 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 525 tggaagcgcaagtctgaacagtatctggcagacagtggagt 565 |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 34223511 tggaagcgcaagtcagaacagtatttggcagacagtggagt 34223471 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 474 acaaaccccaaccatcctctcaacagccttggcaatggcaacatattggt 523 ||||| || |||||||| || |||||||| ||||||||||| ||| |||| Sbjct: 34223873 acaaatcctaaccatccactgaacagcctaggcaatggcaatatactggt 34223824 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 13808478 cgacgacgtcttcgtcgccg 13808459
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Minus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 34315553 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 34315505 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 525 tggaagcgcaagtctgaacagtatctggcagacagtggagt 565 |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 34313983 tggaagcgcaagtcagaacagtatttggcagacagtggagt 34313943 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 474 acaaaccccaaccatcctctcaacagccttggcaatggcaacatattggt 523 ||||| || |||||||| || |||||||| ||||||||||| ||| |||| Sbjct: 34314345 acaaatcctaaccatccactgaacagcctaggcaatggcaatatactggt 34314296 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 13803453 cgacgacgtcttcgtcgccg 13803434
>gb|AC093018.4| Oryza sativa chromosome 3 BAC OSJNBb0081B07 genomic sequence, complete sequence Length = 143205 Score = 89.7 bits (45), Expect = 9e-15 Identities = 48/49 (97%) Strand = Plus / Plus Query: 68 cgcgccccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109917 cgcggcccgccccaccgtcctcgtcaccggcgccggcggccgcacaggt 109965 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 525 tggaagcgcaagtctgaacagtatctggcagacagtggagt 565 |||||||||||||| ||||||||| |||||||||||||||| Sbjct: 111487 tggaagcgcaagtcagaacagtatttggcagacagtggagt 111527 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 474 acaaaccccaaccatcctctcaacagccttggcaatggcaacatattggt 523 ||||| || |||||||| || |||||||| ||||||||||| ||| |||| Sbjct: 111125 acaaatcctaaccatccactgaacagcctaggcaatggcaatatactggt 111174
>ref|XM_493881.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 58.0 bits (29), Expect = 3e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 330 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 389 Query: 335 caagggcggccgccccgagttctactacgaccacggagcctaccctgagcaggtggactg 394 |||||| || ||||| |||||||||| || | || | || |||||||||||||| || Sbjct: 390 caaggggggacgcccagagttctactttgaggatggctcttatcctgagcaggtggattg 449 Query: 395 gattgggcagaagaatcagatcgatgccgccaa 427 |||||| |||| |||||| || ||||| ||||| Sbjct: 450 gattggccagaggaatcaaatagatgctgccaa 482 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgttcaacaagctc 137 |||||||| |||||||||||||| |||||||| ||||| || || |||| ||| |||||| Sbjct: 133 cccaccgtgctcgtcaccggcgcaggcggccgaacaggccagattgtgtacaagaagctc 192 Query: 138 a 138 | Sbjct: 193 a 193
>dbj|AK071038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080F17, full insert sequence Length = 1588 Score = 58.0 bits (29), Expect = 3e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 394 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 453 Query: 335 caagggcggccgccccgagttctactacgaccacggagcctaccctgagcaggtggactg 394 |||||| || ||||| |||||||||| || | || | || |||||||||||||| || Sbjct: 454 caaggggggacgcccagagttctactttgaggatggctcttatcctgagcaggtggattg 513 Query: 395 gattgggcagaagaatcagatcgatgccgccaa 427 |||||| |||| |||||| || ||||| ||||| Sbjct: 514 gattggccagaggaatcaaatagatgctgccaa 546 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgttcaacaagctc 137 |||||||| |||||||||||||| |||||||| ||||| || || |||| ||| |||||| Sbjct: 197 cccaccgtgctcgtcaccggcgcaggcggccgaacaggccagattgtgtacaagaagctc 256 Query: 138 a 138 | Sbjct: 257 a 257
>dbj|AK067116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096K17, full insert sequence Length = 1381 Score = 58.0 bits (29), Expect = 3e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 377 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 436 Query: 335 caagggcggccgccccgagttctactacgaccacggagcctaccctgagcaggtggactg 394 |||||| || ||||| |||||||||| || | || | || |||||||||||||| || Sbjct: 437 caaggggggacgcccagagttctactttgaggatggctcttatcctgagcaggtggattg 496 Query: 395 gattgggcagaagaatcagatcgatgccgccaa 427 |||||| |||| |||||| || ||||| ||||| Sbjct: 497 gattggccagaggaatcaaatagatgctgccaa 529 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggtcaaatcgtgttcaacaagctc 137 |||||||| |||||||||||||| |||||||| ||||| || || |||| ||| |||||| Sbjct: 180 cccaccgtgctcgtcaccggcgcaggcggccgaacaggccagattgtgtacaagaagctc 239 Query: 138 a 138 | Sbjct: 240 a 240
>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04, complete sequence Length = 176678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||||||| |||||||||||||| |||||||| |||||| Sbjct: 38292 cccaccgtgctcgtcaccggcgcaggcggccgaacaggt 38330 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 38723 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 38782 Query: 335 caagggcggccgccccgagttctact 360 |||||| || ||||| |||||||||| Sbjct: 38783 caaggggggacgcccagagttctact 38808
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||||||| |||||||||||||| |||||||| |||||| Sbjct: 120691 cccaccgtgctcgtcaccggcgcaggcggccgaacaggt 120729 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 121122 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 121181 Query: 335 caagggcggccgccccgagttctact 360 |||||| || ||||| |||||||||| Sbjct: 121182 caaggggggacgcccagagttctact 121207
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 78 cccaccgtcctcgtcaccggcgccggcggccgcacaggt 116 |||||||| |||||||||||||| |||||||| |||||| Sbjct: 520893 cccaccgtgctcgtcaccggcgcaggcggccgaacaggt 520931 Score = 44.1 bits (22), Expect = 0.49 Identities = 70/86 (81%) Strand = Plus / Plus Query: 275 cgacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggttcgaccccac 334 ||||||||| ||||||||||||| || || || |||||||| ||||| || |||| Sbjct: 521324 cgacgcgcttatcatcctcaccagtgcggttccgaaaatgaagcctgggtttgatcccag 521383 Query: 335 caagggcggccgccccgagttctact 360 |||||| || ||||| |||||||||| Sbjct: 521384 caaggggggacgcccagagttctact 521409
>gb|AY111041.1| Zea mays CL63430_1 mRNA sequence Length = 844 Score = 52.0 bits (26), Expect = 0.002 Identities = 76/90 (84%), Gaps = 2/90 (2%) Strand = Plus / Plus Query: 378 cctgagcaggtggactggattgggcagaagaatcagatcgatgccgccaa-agcagccgg 436 |||||||||||||| |||||||| || |||||||| || ||||| || || |||| ||| Sbjct: 255 cctgagcaggtggattggattggccaaaagaatcaaattgatgctgctaagagca-tcgg 313 Query: 437 tgtgaagcacatagtgttggttggatccat 466 || ||||||||||| ||||| |||||||| Sbjct: 314 tgcaaagcacatagttttggtgggatccat 343 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 276 gacgcgctcgtcatcctcaccagcgcctccccaaagatgaagcccgggtt 325 ||||||||| |||||||||||||||| |||||||||||| || ||||| Sbjct: 153 gacgcgctcatcatcctcaccagcgcggtcccaaagatgaaaccggggtt 202
>dbj|AP006363.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34B12, TM0147b, complete sequence Length = 56052 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 385 aggtggactggattgggcagaagaatcagatcgatgc 421 |||||||||||||||||||||| ||||| || ||||| Sbjct: 11797 aggtggactggattgggcagaaaaatcaaatagatgc 11833
>ref|NM_129322.2| Arabidopsis thaliana unknown protein AT2G37660 mRNA, complete cds Length = 1227 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 caggtggactggattgggcagaagaatcagat 415 ||||| ||||||||||| |||||||||||||| Sbjct: 617 caggttgactggattggtcagaagaatcagat 648
>gb|AY081456.1| Arabidopsis thaliana unknown protein (At2g37660) mRNA, complete cds Length = 1073 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 caggtggactggattgggcagaagaatcagat 415 ||||| ||||||||||| |||||||||||||| Sbjct: 535 caggttgactggattggtcagaagaatcagat 566
>gb|AY042827.1| Arabidopsis thaliana Unknown protein (At2g37660; F13M22.16) mRNA, complete cds Length = 1139 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 caggtggactggattgggcagaagaatcagat 415 ||||| ||||||||||| |||||||||||||| Sbjct: 550 caggttgactggattggtcagaagaatcagat 581
>gb|AY085201.1| Arabidopsis thaliana clone 13797 mRNA, complete sequence Length = 1176 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 384 caggtggactggattgggcagaagaatcagat 415 ||||| ||||||||||| |||||||||||||| Sbjct: 617 caggttgactggattggtcagaagaatcagat 648
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 417 gatgccgccaaagcagccggtgtgaag 443 ||||||||||||||||||| ||||||| Sbjct: 618278 gatgccgccaaagcagccgatgtgaag 618252
>gb|AC004684.3| Arabidopsis thaliana chromosome 2 clone F13M22 map ve018, complete sequence Length = 93845 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 385 aggtggactggattgggcagaagaatcagat 415 |||| ||||||||||| |||||||||||||| Sbjct: 52344 aggttgactggattggtcagaagaatcagat 52314
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Minus Query: 267 cagggcgccgacgcgctcgtcatcctcacc 296 |||||||||||||| ||||||||| ||||| Sbjct: 1787393 cagggcgccgacgccctcgtcatcgtcacc 1787364 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcctcgtcaccggcgccg 102 |||||||||||||||||||| Sbjct: 4830227 cgtcctcgtcaccggcgccg 4830246
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 255 gcgcccgccgtccagggcgccg 276 |||||||||||||||||||||| Sbjct: 2436900 gcgcccgccgtccagggcgccg 2436879 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 gccgtccagggcgccgacgc 280 |||||||||||||||||||| Sbjct: 321168 gccgtccagggcgccgacgc 321187
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 83 cgtcctcgtcaccggcgccggcggcc 108 ||||||||||| |||||||||||||| Sbjct: 1763705 cgtcctcgtcatcggcgccggcggcc 1763730 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 86 cctcgtcaccggcgccggcggc 107 |||||||||||||||||||||| Sbjct: 1346748 cctcgtcaccggcgccggcggc 1346727 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggaccacctcgcgcccgccg 264 |||||||||||||||||||| Sbjct: 3808934 ggaccacctcgcgcccgccg 3808953 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gcgccggcggccgcacaggt 116 |||||||||||||||||||| Sbjct: 1018226 gcgccggcggccgcacaggt 1018245 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 cggaccacctcgcgcccgccgtcc 267 |||| ||||||||||||||||||| Sbjct: 277195 cggagcacctcgcgcccgccgtcc 277172
>dbj|AB193609.1| Streptomyces sp. NRRL 11266 tetronomycin biosynthetic gene cluster, partial and complete cds Length = 113234 Score = 44.1 bits (22), Expect = 0.49 Identities = 28/30 (93%) Strand = Plus / Plus Query: 70 cgccccgccccaccgtcctcgtcaccggcg 99 |||||||| |||||||||||||||||||| Sbjct: 45777 cgccccgcggcaccgtcctcgtcaccggcg 45806
>gb|AC164069.9| Mus musculus chromosome 15, clone RP23-422H17, complete sequence Length = 216364 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 ctcaacagccttggcaatggc 512 ||||||||||||||||||||| Sbjct: 161569 ctcaacagccttggcaatggc 161589
>ref|XM_474205.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggcc 108 ||||||||||||||||||||| Sbjct: 530 tcgtcaccggcgccggcggcc 550
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ctcgtcaccggcgccggcggc 107 ||||||||||||||||||||| Sbjct: 131650 ctcgtcaccggcgccggcggc 131670
>gb|AC162693.5| Mus musculus chromosome 15, clone RP24-89G21, complete sequence Length = 159813 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 ctcaacagccttggcaatggc 512 ||||||||||||||||||||| Sbjct: 11888 ctcaacagccttggcaatggc 11908
>gb|AC132119.2| Mus musculus BAC clone RP23-467E2 from chromosome 6, complete sequence Length = 161817 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 gtgaccttcagtctgcagcct 36 ||||||||||||||||||||| Sbjct: 123199 gtgaccttcagtctgcagcct 123219
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 86 cctcgtcaccggcgccggcggccgc 110 ||||| ||||||||||||||||||| Sbjct: 139960 cctcggcaccggcgccggcggccgc 139936
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 77 ccccaccgtcctcgtcaccggcgccggcggccg 109 |||||| ||||||||||||| |||| ||||||| Sbjct: 38151 ccccacggtcctcgtcaccgacgcccgcggccg 38119
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggcc 108 ||||||||||||||||||||| Sbjct: 123719 tcgtcaccggcgccggcggcc 123739
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggcc 108 ||||||||||||||||||||| Sbjct: 43102 tcgtcaccggcgccggcggcc 43122
>dbj|AK024362.1| Homo sapiens cDNA FLJ14300 fis, clone PLACE1011891 Length = 1870 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ggccgcgccccgccccaccgt 85 ||||||||||||||||||||| Sbjct: 429 ggccgcgccccgccccaccgt 409
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggcc 108 ||||||||||||||||||||| Sbjct: 123837 tcgtcaccggcgccggcggcc 123857
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggcc 108 ||||||||||||||||||||| Sbjct: 33692659 tcgtcaccggcgccggcggcc 33692679
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ctcgtcaccggcgccggcggc 107 ||||||||||||||||||||| Sbjct: 18489220 ctcgtcaccggcgccggcggc 18489240
>emb|BX819511.1|CNS0A9WF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZC11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 391 actggattgggcagaagaatcagat 415 |||||||||| |||||||||||||| Sbjct: 532 actggattggtcagaagaatcagat 556
>gb|AE004818.1| Pseudomonas aeruginosa PAO1, section 379 of 529 of the complete genome Length = 11721 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ccctgccaggtgccatggccg 69 ||||||||||||||||||||| Sbjct: 7134 ccctgccaggtgccatggccg 7114
>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete sequence Length = 229155 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ggccgcgccccgccccaccgt 85 ||||||||||||||||||||| Sbjct: 131353 ggccgcgccccgccccaccgt 131333
>emb|AJ332630.1|HSA332630 Homo sapiens genomic sequence surrounding NotI site, clone NR3-BC9C Length = 504 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ggccgcgccccgccccaccgt 85 ||||||||||||||||||||| Sbjct: 3 ggccgcgccccgccccaccgt 23
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 caccgtcctcgtcaccggcgc 100 ||||||||||||||||||||| Sbjct: 1595753 caccgtcctcgtcaccggcgc 1595733
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 gccatggccgcgccccgccccaccg 84 ||||||||| ||||||||||||||| Sbjct: 2054777 gccatggccccgccccgccccaccg 2054801
>emb|AJ343325.1|HSA343325 Homo sapiens genomic sequence surrounding NotI site, clone NR1-RK1C Length = 696 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ggccgcgccccgccccaccgt 85 ||||||||||||||||||||| Sbjct: 3 ggccgcgccccgccccaccgt 23
>emb|AJ342620.1|HSA342620 Homo sapiens genomic sequence surrounding NotI site, clone NB6-578C Length = 593 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 65 ggccgcgccccgccccaccgt 85 ||||||||||||||||||||| Sbjct: 3 ggccgcgccccgccccaccgt 23
>ref|XM_550367.1| Oryza sativa (japonica cultivar-group), mRNA Length = 348 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 254 cgcgcccgccgtccagggcgccga 277 |||| ||||||||||||||||||| Sbjct: 174 cgcggccgccgtccagggcgccga 197
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgtcctcgtcaccggcgccg 102 |||||||||||||||||||| Sbjct: 2849929 cgtcctcgtcaccggcgccg 2849948
>ref|NM_190275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1794 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gccgacgacgtcttcgtcgccgac 233 |||||||||||||||| ||||||| Sbjct: 388 gccgacgacgtcttcgccgccgac 411
>gb|DQ149987.1| Streptomyces neyagawaensis concanamycin A biosynthetic gene cluster, complete sequence Length = 99892 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 caccgtcctcgtcaccggcg 99 |||||||||||||||||||| Sbjct: 64211 caccgtcctcgtcaccggcg 64230
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 gggcgccgacgcgctcgtcatcctcacc 296 |||||| ||||||||||||||| ||||| Sbjct: 446245 gggcgcggacgcgctcgtcatcgtcacc 446218
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 caccgtcctcgtcaccggcg 99 |||||||||||||||||||| Sbjct: 1210197 caccgtcctcgtcaccggcg 1210216
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 gggcgccgacgcgctcgtcatcctcacc 296 |||||| ||||||||||||||| ||||| Sbjct: 3293878 gggcgcggacgcgctcgtcatcgtcacc 3293851
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 ctcgcgcccgccgtccaggg 271 |||||||||||||||||||| Sbjct: 720688 ctcgcgcccgccgtccaggg 720707
>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown polyketide biosynthetic gene cluster, partial sequence; and AHBA biosynthesis gene cluster, complete sequence Length = 55488 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 caccgtcctcgtcaccggcg 99 |||||||||||||||||||| Sbjct: 11931 caccgtcctcgtcaccggcg 11950
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggcctggtgaggtccgagga 187 |||||||||||||||||||| Sbjct: 15985 ggcctggtgaggtccgagga 15966
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 113231 cacctcgcgcccgccgtcca 113212
>gb|AC152938.3| Mus musculus BAC clone RP23-469O12 from chromosome 7, complete sequence Length = 183468 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 cctccccaaagatgaagccc 320 |||||||||||||||||||| Sbjct: 58166 cctccccaaagatgaagccc 58185
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 12850 cacctcgcgcccgccgtcca 12831
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 caccgtcctcgtcaccggcg 99 |||||||||||||||||||| Sbjct: 67613 caccgtcctcgtcaccggcg 67594
>emb|AL591786.1|SME591786 Sinorhizobium meliloti 1021 complete chromosome; segment 5/12 Length = 299350 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 127397 cgacgacgtcttcgtcgccg 127416
>gb|AC026261.8| Homo sapiens chromosome 8, clone RP11-610E3, complete sequence Length = 193670 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 gcagaagaatcagatcgatg 420 |||||||||||||||||||| Sbjct: 27585 gcagaagaatcagatcgatg 27566
>emb|AL353093.18| Human DNA sequence from clone RP11-224P11 on chromosome 10 Contains a single-stranded DNA binding protein (SSBP1)(SSBP) pseudogene, complete sequence Length = 156008 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gtgaccttcagtctgcagcc 35 |||||||||||||||||||| Sbjct: 3125 gtgaccttcagtctgcagcc 3144
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 269 gggcgccgacgcgctcgtcatcctcacc 296 |||||| ||||||||||||||| ||||| Sbjct: 3025007 gggcgcggacgcgctcgtcatcgtcacc 3024980
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cgacgtcttcgtcgccgaca 234 |||||||||||||||||||| Sbjct: 135935 cgacgtcttcgtcgccgaca 135954
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 caccgtcctcgtcaccggcg 99 |||||||||||||||||||| Sbjct: 45638 caccgtcctcgtcaccggcg 45619
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 80 caccgtcctcgtcaccggcgccggcggc 107 ||||| ||||||||||||||||| |||| Sbjct: 165039 caccgccctcgtcaccggcgccgccggc 165012
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 ccgaggagagcaagcagaagatcg 204 ||||||||| |||||||||||||| Sbjct: 5366056 ccgaggagatcaagcagaagatcg 5366079 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggc 107 |||||||||||||||||||| Sbjct: 864263 tcgtcaccggcgccggcggc 864244
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 210 gccgacgacgtcttcgtcgccgac 233 ||||| |||||||||||||||||| Sbjct: 385343 gccgaagacgtcttcgtcgccgac 385320
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cccaccgtcctcgtcaccgg 97 |||||||||||||||||||| Sbjct: 337600 cccaccgtcctcgtcaccgg 337581
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 85006 cgacgacgtcttcgtcgccg 84987
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 ggcctggtgaggtccgagga 187 |||||||||||||||||||| Sbjct: 85139 ggcctggtgaggtccgagga 85120
>gb|AC012323.7|AC012323 Homo sapiens chromosome 16 clone RP11-89O14, complete sequence Length = 176512 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 gactggattgggcagaagaatcag 413 |||| ||||||||||||||||||| Sbjct: 98305 gacttgattgggcagaagaatcag 98328
>dbj|AK047280.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930044O10 product:similar to RGL1 [Homo sapiens], full insert sequence Length = 1601 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 tcgtcatcctcaccagcgcc 302 |||||||||||||||||||| Sbjct: 669 tcgtcatcctcaccagcgcc 650
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 2779715 tcgtcgccggcgccggcggccgca 2779692
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 19010033 cacctcgcgcccgccgtcca 19010014
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cgcgcccgccgtccagggcgccga 277 |||| ||||||||||||||||||| Sbjct: 3424856 cgcggccgccgtccagggcgccga 3424833
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gccgacgacgtcttcgtcgccgac 233 |||||||||||||||| ||||||| Sbjct: 38994312 gccgacgacgtcttcgccgccgac 38994335 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccccaccgtcctcgtcacc 95 |||||||||||||||||||| Sbjct: 21739714 gccccaccgtcctcgtcacc 21739733
>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase, polyketide synthase type Is, acyl transferase, membrane protein, ABC transporter, sugar dehydratase/epimerase, sugar epimerase, sugar nucleotidyltransferase, sugar dehydratase/epimerase, thioesterase, acyl CoA ligase, amine oxidase, phosphopantetheinyl transferase, transcriptional regulator, carboxylase/carboxyltransferase, amidinohydrolase, amide synthetase, 5-aminolevulinate synthase, and acyl CoA ligase genes, complete cds; and unknown gene Length = 161719 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 80 caccgtcctcgtcaccggcgccggcggc 107 |||||||||||||||||| ||| ||||| Sbjct: 81880 caccgtcctcgtcaccggggccagcggc 81907
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 accgtcctcgtcaccggcgccggc 104 ||||||||| |||||||||||||| Sbjct: 4389329 accgtcctcatcaccggcgccggc 4389352 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 gcccgccgtccagggcgccg 276 |||||||||||||||||||| Sbjct: 3800599 gcccgccgtccagggcgccg 3800580
>gb|AE004556.1| Pseudomonas aeruginosa PAO1, section 117 of 529 of the complete genome Length = 11513 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 cgtcaccggcgccggcggcc 108 |||||||||||||||||||| Sbjct: 5588 cgtcaccggcgccggcggcc 5569
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gccgacgacgtcttcgtcgccgac 233 |||||||||||||||| ||||||| Sbjct: 67945 gccgacgacgtcttcgccgccgac 67968
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 210 gccgacgacgtcttcgtcgccgac 233 |||||||||||||||| ||||||| Sbjct: 12292 gccgacgacgtcttcgccgccgac 12315
>gb|AF159428.1|AF159428 Burkholderia pseudomallei putative UDP-glucose dehydrogenase (udg), putative ADP-heptose synthase (waaE), and putative ADP-glycero-mannoheptose epimerase (gmhD) genes, complete cds Length = 3530 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 gggcgccgacgcgctcgtcatcctcacc 296 |||||| ||||||||||||||| ||||| Sbjct: 1242 gggcgcggacgcgctcgtcatcgtcacc 1269
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tcaccggcgccggcggccgc 110 |||||||||||||||||||| Sbjct: 2700670 tcaccggcgccggcggccgc 2700651
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gggcgccgacgcgctcgtca 288 |||||||||||||||||||| Sbjct: 8866825 gggcgccgacgcgctcgtca 8866806
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0033B09 Length = 143545 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cgcgcccgccgtccagggcgccga 277 |||| ||||||||||||||||||| Sbjct: 41560 cgcggccgccgtccagggcgccga 41537
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone P0680A03 Length = 156054 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 cgcgcccgccgtccagggcgccga 277 |||| ||||||||||||||||||| Sbjct: 116410 cgcggccgccgtccagggcgccga 116387
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 gccccaccgtcctcgtcacc 95 |||||||||||||||||||| Sbjct: 91765 gccccaccgtcctcgtcacc 91784
>dbj|AB004563.1| Terrabacter sp. dbfB, dbfC and orfL(3, 4, 5 and 6) genes involved in the degradation of dibenzofuran, complete cds Length = 8599 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggc 107 |||||||||||||||||||| Sbjct: 2682 tcgtcaccggcgccggcggc 2701
>dbj|AK100121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007K21, full insert sequence Length = 1476 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 156 cgacgacgtcttcgtcgccg 137
>dbj|AK099278.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125D09, full insert sequence Length = 1546 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 94 tcgtcgccggcgccggcggccgca 71
>dbj|AK072250.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004F04, full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cgacgacgtcttcgtcgccg 231 |||||||||||||||||||| Sbjct: 153 cgacgacgtcttcgtcgccg 134
>dbj|AK072086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116L20, full insert sequence Length = 1485 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 103 tcgtcgccggcgccggcggccgca 80
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 195 cacctcgcgcccgccgtcca 176
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 cccaccgtcctcgtcaccgg 97 |||||||||||||||||||| Sbjct: 2349090 cccaccgtcctcgtcaccgg 2349071 Score = 40.1 bits (20), Expect = 7.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 gccgacgacgtcttcgtcgccgacatca 237 |||||||||||| |||||||||||||| Sbjct: 1072531 gccgacgacgtcaccgtcgccgacatca 1072558
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 192 cacctcgcgcccgccgtcca 173
>dbj|AP003732.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-682D22, complete sequence Length = 193132 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ccgccccaccgtcctcgtca 93 |||||||||||||||||||| Sbjct: 52116 ccgccccaccgtcctcgtca 52135
>gb|BC098932.1| Rattus norvegicus tumor suppressor candidate 4, mRNA (cDNA clone MGC:114378 IMAGE:7386309), complete cds Length = 2001 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccgaggagagcaagcagaag 200 |||||||||||||||||||| Sbjct: 618 ccgaggagagcaagcagaag 637
>gb|BC083745.1| Rattus norvegicus tumor suppressor candidate 4, mRNA (cDNA clone IMAGE:7192224), partial cds Length = 1621 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccgaggagagcaagcagaag 200 |||||||||||||||||||| Sbjct: 556 ccgaggagagcaagcagaag 575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 cacctcgcgcccgccgtcca 268 |||||||||||||||||||| Sbjct: 19168682 cacctcgcgcccgccgtcca 19168663
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 2779659 tcgtcgccggcgccggcggccgca 2779636
>ref|NM_001025744.1| Rattus norvegicus tumor suppressor candidate 4 (Tusc4), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccgaggagagcaagcagaag 200 |||||||||||||||||||| Sbjct: 618 ccgaggagagcaagcagaag 637
>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145539 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 90732 tcgtcgccggcgccggcggccgca 90755
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggccgca 111 ||||| |||||||||||||||||| Sbjct: 148641 tcgtcgccggcgccggcggccgca 148618
>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence Length = 218935 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 cgaggggcctggtgaggtcc 182 |||||||||||||||||||| Sbjct: 79175 cgaggggcctggtgaggtcc 79156
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 tcgtcaccggcgccggcggc 107 |||||||||||||||||||| Sbjct: 2671047 tcgtcaccggcgccggcggc 2671028 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,006,274 Number of Sequences: 3902068 Number of extensions: 4006274 Number of successful extensions: 94617 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90566 Number of HSP's gapped (non-prelim): 4043 length of query: 568 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 545 effective length of database: 17,143,297,704 effective search space: 9343097248680 effective search space used: 9343097248680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)