Clone Information

BLAST Search Result

Clone Name	bah63a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin ...	220	3e-57
2	VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin ...	212	8e-55
3	VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Vol...	211	2e-54
4	VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein...	209	4e-54
5	VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein...	204	1e-52
6	VDAC_PEA (P42054) Outer plastidial membrane protein porin (Volta...	195	1e-49
7	VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin ...	190	3e-48
8	VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin ...	189	4e-48
9	VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (P...	63	6e-10
10	VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin	55	2e-07
11	VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protei...	53	6e-07
12	VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel p...	47	3e-05
13	VDAC2_RAT (P81155) Voltage-dependent anion-selective channel pro...	45	2e-04
14	VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel p...	45	2e-04
15	VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin ...	43	9e-04
16	PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacema...	32	1.5
17	PMPC_CHLTR (O84419) Probable outer membrane protein pmpC precurs...	32	2.0
18	TOM40_HUMAN (O96008) Probable mitochondrial import receptor subu...	32	2.0
19	RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding sub...	32	2.0
20	TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subu...	31	2.6
21	TOM40_XENTR (Q6P825) Probable mitochondrial import receptor subu...	31	2.6
22	TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subuni...	31	2.6
23	FLGI_ERWCT (Q6D6H2) Flagellar P-ring protein precursor (Basal bo...	31	2.6
24	ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21...	31	3.4
25	GLMM_PSYAR (Q4FS01) Phosphoglucosamine mutase (EC 5.4.2.10)	30	4.4
26	VIRB9_AGRTU (P0A3W6) Protein virB9 precursor	30	4.4
27	VIRB9_AGRT9 (P0A3W7) Protein virB9 precursor	30	4.4
28	TOM40_XENLA (Q7ZTM6) Probable mitochondrial import receptor subu...	30	4.4
29	FUR_HAEDU (P71333) Ferric uptake regulation protein (Ferric upta...	30	4.4
30	VIRB9_AGRT5 (P17799) Protein virB9 precursor	30	5.7
31	HIS6_BUCAI (P57206) Imidazole glycerol phosphate synthase subuni...	30	5.7
32	YA00_PYRHO (O58728) Hypothetical UPF0118 protein PH1000	30	5.7
33	TRFR_HUMAN (P34981) Thyrotropin-releasing hormone receptor (TRH-...	30	7.5
34	RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif pro...	29	9.8
35	CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel al...	29	9.8
36	Y2756_YERPE (Q8ZD36) UPF0209 protein YPO2756/y1590/YP2407	29	9.8
37	HNF1B_XENLA (Q91910) Hepatocyte nuclear factor 1-beta (HNF-1B) (...	29	9.8
38	RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding sub...	29	9.8

>VDAC1_WHEAT (P46274) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 275

 Score =  220 bits (560), Expect = 3e-57
 Identities = 113/195 (57%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           IT++STKK +  + ++Q+Q+K KN TVDVKA             +L  PGLK +LS   P
Sbjct: 40  ITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVP 99

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            QKS  GK ELQYLH + GIN S+GL  NP+VN+SG  GT ALA G DV+ DTA+ +F K
Sbjct: 100 DQKS--GKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAK 157

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLT-TAVGAEIAHSFSSNENTITVGTQ 576
           YNA +S+TNQDL ASL LNNKG++L ASYYH V+ + TAVGAE+ HSFSSNEN++T GTQ
Sbjct: 158 YNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQ 217

Query: 577 HELDPLTTLKGRYNN 621
           H LDPLT +K R NN
Sbjct: 218 HTLDPLTLVKARINN 232

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>VDAC1_ORYSA (Q6K548) Outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC)
          Length = 273

 Score =  212 bits (539), Expect = 8e-55
 Identities = 111/195 (56%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           IT++STKK + I  ++Q+Q+K KN TVDVKA             EL  PGLK +LS   P
Sbjct: 39  ITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELT-PGLKSILSFAVP 97

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            Q+S  GK ELQY H + G++ S+GL  +P+VN+S V GTKALA G DV+ DTA+G+ TK
Sbjct: 98  DQRS--GKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTK 155

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQV-QLTTAVGAEIAHSFSSNENTITVGTQ 576
           YNAG+S +N DL ASL LNNKG++L ASYYH V    TAVGAE+ HSFSSNEN++T GTQ
Sbjct: 156 YNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQ 215

Query: 577 HELDPLTTLKGRYNN 621
           H LDPLT +K R+NN
Sbjct: 216 HTLDPLTVVKARFNN 230

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>VDAC_MAIZE (P42057) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 277

 Score =  211 bits (536), Expect = 2e-54
 Identities = 108/196 (55%), Positives = 138/196 (70%), Gaps = 2/196 (1%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           IT++ T+KNE+I  +L TQ+K K  TVDVKA             E   PGLK +++L  P
Sbjct: 41  ITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVP 100

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            Q+S  GK E QYLH + G+N SVGLN NP+VN+SG  G+KAL+ G+DV+FDTA+ DFTK
Sbjct: 101 DQRS--GKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTK 158

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQ--LTTAVGAEIAHSFSSNENTITVGT 573
           YNA +S T+ DL ASL LNN G+TL ASYYH V+    TAVGAE++HS S NE+T+  G+
Sbjct: 159 YNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGS 218

Query: 574 QHELDPLTTLKGRYNN 621
           QH LDP TT+K R+NN
Sbjct: 219 QHSLDPHTTIKTRFNN 234

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>VDAC1_SOLTU (P42055) 34 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 34)
          Length = 275

 Score =  209 bits (533), Expect = 4e-54
 Identities = 112/196 (57%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           ITSS +KK +  L+D+ TQ+K KN T D+K              E   PGLK +LS   P
Sbjct: 40  ITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAA-PGLKTILSFRVP 98

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            Q+S  GK E+QYLH + GI  SVGL  NP+VN SGV+GT  +A G DV+FDT +GDFTK
Sbjct: 99  DQRS--GKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTK 156

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQ--LTTAVGAEIAHSFSSNENTITVGT 573
            NAG+S TN DL ASL LNNKG+ L ASYYH V    +TAVGAE+ HSFS+NEN ITVGT
Sbjct: 157 CNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGT 216

Query: 574 QHELDPLTTLKGRYNN 621
           QH LDPLT++K R NN
Sbjct: 217 QHRLDPLTSVKARINN 232

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>VDAC2_SOLTU (P42056) 36 kDa outer mitochondrial membrane protein porin|
           (Voltage-dependent anion-selective channel protein)
           (VDAC) (POM 36)
          Length = 275

 Score =  204 bits (520), Expect = 1e-52
 Identities = 109/196 (55%), Positives = 135/196 (68%), Gaps = 2/196 (1%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           IT+S  KK E  L+D+ TQ+K KN T DVK              E   PGLK + S   P
Sbjct: 40  ITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPA-PGLKTIFSFVVP 98

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            QKS  GK ELQYLH + GIN S+GL  +PLVN SGV G   +A G D++FDTA+G+FTK
Sbjct: 99  DQKS--GKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTK 156

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQ--LTTAVGAEIAHSFSSNENTITVGT 573
            NAG+S ++ DL ASL LN+KG+T++ASYYH V+    TAVGAE+ HSFSSNENT+T+GT
Sbjct: 157 CNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGT 216

Query: 574 QHELDPLTTLKGRYNN 621
           QH LDPLTT+K R N+
Sbjct: 217 QHLLDPLTTVKARVNS 232

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>VDAC_PEA (P42054) Outer plastidial membrane protein porin (Voltage-dependent|
           anion-selective channel protein) (VDAC)
          Length = 275

 Score =  195 bits (495), Expect = 1e-49
 Identities = 104/196 (53%), Positives = 125/196 (63%), Gaps = 2/196 (1%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           ITSS TKK E  L D+ TQ+K KN T D+K              E   PG+K +LS   P
Sbjct: 40  ITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPA-PGVKAILSFKVP 98

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            Q  T GK ELQYLH + GI+ SVGL  NP+VN S VIGT ALAFG D++FDT  G+ TK
Sbjct: 99  EQ--TSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTK 156

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQ--LTTAVGAEIAHSFSSNENTITVGT 573
            NA ++    DL  SL LN KG+ L+ASYYH +     TAVG +I+H FS+ ENT T+GT
Sbjct: 157 SNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGT 216

Query: 574 QHELDPLTTLKGRYNN 621
           QH LDPLTT+KGR  N
Sbjct: 217 QHALDPLTTVKGRVTN 232

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>VDAC2_ARATH (Q9SMX3) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 273

 Score =  190 bits (482), Expect = 3e-48
 Identities = 100/194 (51%), Positives = 124/194 (63%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           IT++ T K    L D+ TQVK  NFT DVK              E   PGLK ++    P
Sbjct: 40  ITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPA-PGLKVIVQAKLP 98

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
             KS  GKAE+QY H + GI+ SVG    P+VN SGV+GT  L+ G DVA++T SG+F  
Sbjct: 99  DHKS--GKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKH 156

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQH 579
           +NAG + T  DLTASL+LN+KG  L ASYY  V  +T VGAEI+H+F++ EN ITVGTQH
Sbjct: 157 FNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQH 216

Query: 580 ELDPLTTLKGRYNN 621
            LDPLTT+K R NN
Sbjct: 217 ALDPLTTVKARVNN 230

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>VDAC1_ARATH (Q9SRH5) Outer mitochondrial membrane protein porin 1|
           (Voltage-dependent anion-selective channel protein 1)
           (VDAC 1)
          Length = 275

 Score =  189 bits (481), Expect = 4e-48
 Identities = 102/196 (52%), Positives = 128/196 (65%), Gaps = 2/196 (1%)
 Frame = +1

Query: 40  ITSSSTKKNEAILSDLQTQVKIKNFTVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPFP 219
           ITS+ TKK + +L D+  Q + KN T D+K              E   PGL+ + S   P
Sbjct: 40  ITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAA-PGLRSIFSFKVP 98

Query: 220 YQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
            Q S  GK ELQYLH + GI+ S+GL  NP VN SGVIG+  LA G DV+FDT SG+FTK
Sbjct: 99  DQNS--GKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTK 156

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQ--LTTAVGAEIAHSFSSNENTITVGT 573
            NAG+S T +DL ASL +N+KG+ L ASYYH V     TAVGAE++H  SS ++TITVGT
Sbjct: 157 INAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGT 216

Query: 574 QHELDPLTTLKGRYNN 621
           QH LDPLT++K R N+
Sbjct: 217 QHSLDPLTSVKARVNS 232

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>VDAC_DROME (Q94920) Voltage-dependent anion-selective channel (Porin) (DmVDAC)|
          Length = 281

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
 Frame = +1

Query: 52  STKKNEAILSDLQTQVKIKNF--TVDVKAXXXXXXXXXXXXPELCKPGLKGVLSLPF-PY 222
           S +++  +   L+T+ K+K++  T+  K              +    GLK  L   F P 
Sbjct: 45  SNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQ 104

Query: 223 QKSTPGKAELQYLHPHLGINGSVGLN-PNPLVNISGVIGTKALAFGLDVAFDTASGDFTK 399
             +  GK ++ Y H ++  +  V ++   PL+N S V+G +    G   AFDT     T 
Sbjct: 105 SGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTT 164

Query: 400 YNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQH 579
            N  + +T +D      +N+ G   + S + +      VG +++ +  ++     +G ++
Sbjct: 165 NNFALGYTTKDFVLHTAVND-GQEFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGAKY 223

Query: 580 ELDPLTTLKGRYNN 621
           +LD   +++ + NN
Sbjct: 224 QLDDDASVRAKVNN 237

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>VDAC_NEUCR (P07144) Outer mitochondrial membrane protein porin|
          Length = 283

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 3/148 (2%)
 Frame = +1

Query: 187 GLK--GVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGL 360
           GLK  G+ S   P   +   K  L +   +        L   P  NI  ++G +    G 
Sbjct: 93  GLKAEGIFSF-LPATNARGAKFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGA 151

Query: 361 DVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIA-HS 537
              +D      T Y+A + +     +A++   +  +  +ASYYH+V      G++   +S
Sbjct: 152 SAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVNSQVEAGSKATWNS 211

Query: 538 FSSNENTITVGTQHELDPLTTLKGRYNN 621
            + N   + V T++ +DP++ +KG+ N+
Sbjct: 212 KTGNTVGLEVATKYRIDPVSFVKGKIND 239

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>VDAC_SCHPO (Q9P544) Probable outer mitochondrial membrane protein porin|
          Length = 282

 Score = 53.1 bits (126), Expect = 6e-07
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
 Frame = +1

Query: 184 PGLKGVLSLPFPYQKSTPGKA---ELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAF 354
           PGL   L++   +  +T  K     L++ HP +  + SV       +     +G +    
Sbjct: 91  PGLH--LNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALERKFLG-DFTVGHEGFLA 147

Query: 355 GLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAH 534
           G +  +D   G+ + Y A + +    L+ +L  +N  +   ASYYH+V      G  +  
Sbjct: 148 GAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASYYHRVSSDVEAGGNVTW 207

Query: 535 SFSSNENTIT--VGTQHELDPLTTLKGRYNN 621
             +S  N IT  + +++ LD  T +KG+ N+
Sbjct: 208 DAASTANAITLELASKYALDKDTFVKGKINS 238

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>VDAC2_XENLA (P81004) Voltage-dependent anion-selective channel protein 2 (Outer|
           mitochondrial membrane protein porin)
          Length = 282

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 2/147 (1%)
 Frame = +1

Query: 187 GLKGVLSLPF-PYQKSTPGKAELQYLHPHLGINGSVGLN-PNPLVNISGVIGTKALAFGL 360
           GLK      F P      GK +  Y   ++ +   V  +   P ++ S V+G +    G 
Sbjct: 93  GLKLTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGPAIHGSAVVGYEGWLAGY 152

Query: 361 DVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSF 540
            + FD+A    TK N  + +   D      +N+ G+  A S Y +V         +A + 
Sbjct: 153 QMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVND-GSEFAGSIYQKVSDKMETAVNLAWTS 211

Query: 541 SSNENTITVGTQHELDPLTTLKGRYNN 621
            +N     +  +++LD    +  + NN
Sbjct: 212 GNNSTRFGIAAKYQLDSHAAISAKVNN 238

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>VDAC2_RAT (P81155) Voltage-dependent anion-selective channel protein 2|
           (VDAC-2) (Outer mitochondrial membrane protein porin 2)
           (B36-VDAC)
          Length = 295

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
 Frame = +1

Query: 172 ELCKPGLKGVLSLPF-PYQKSTPGKAELQYLHPHLGINGSVGLN-PNPLVNISGVIGTKA 345
           ++C+ GLK      F P      GK +  Y    + +   V  +   P ++ S V G + 
Sbjct: 102 QICQ-GLKLTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAGPAIHGSAVFGYEG 160

Query: 346 LAFGLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAE 525
              G  + FD+A    T+ N  + +   D      +NN G     S Y +V         
Sbjct: 161 WLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTNVNN-GTEFGGSIYQKVCEDFDTSVN 219

Query: 526 IAHSFSSNENTITVGTQHELDPLTTLKGRYNN 621
           +A +  +N     +  +++LDP  ++  + NN
Sbjct: 220 LAWTSGTNCTRFGIAAKYQLDPTASISAKVNN 251

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>VDAC2_MOUSE (Q60930) Voltage-dependent anion-selective channel protein 2|
           (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane
           protein porin 2)
          Length = 295

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 34/152 (22%), Positives = 61/152 (40%), Gaps = 2/152 (1%)
 Frame = +1

Query: 172 ELCKPGLKGVLSLPF-PYQKSTPGKAELQYLHPHLGINGSVGLN-PNPLVNISGVIGTKA 345
           ++C+ GLK      F P      GK +  Y    + +   V  +   P ++ S V G + 
Sbjct: 102 QICQ-GLKLTFDTTFSPNTGKKSGKIKSAYKRECINLGCDVDFDFAGPAIHGSAVFGYEG 160

Query: 346 LAFGLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAE 525
              G  + FD+A    T+ N  + +   D      +NN G     S Y +V         
Sbjct: 161 WLAGYQMTFDSAKSKLTRSNFAVGYRTGDFQLHTNVNN-GTEFGGSIYQKVCEDFDTSVN 219

Query: 526 IAHSFSSNENTITVGTQHELDPLTTLKGRYNN 621
           +A +  +N     +  +++LDP  ++  + NN
Sbjct: 220 LAWTSGTNCTRFGIAAKYQLDPTASISAKVNN 251

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>VDAC2_YEAST (P40478) Outer mitochondrial membrane protein porin 2|
           (Voltage-dependent anion-selective channel protein 2)
           (VDAC 2)
          Length = 281

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 3/146 (2%)
 Frame = +1

Query: 184 PGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVG-LNPNPLVNISGVIGTKALAFGL 360
           PG KG ++     Q     K  L Y         S+  L P   V  S  +G +    G 
Sbjct: 92  PGWKGDVNAFLTPQSIKNAKFNLSYAQKSFAARTSIDILQPKDFVG-SVTLGHRGFVGGT 150

Query: 361 DVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVG--AEIAH 534
           D+A+DTA+G   +Y   + +  ++ +  L  NN+     AS++  V     VG  A +  
Sbjct: 151 DIAYDTAAGLCARYAMSIGYLAREYSFILSTNNR-QCATASFFQNVNRYLQVGTKATLQS 209

Query: 535 SFSSNENTITVGTQHELDPLTTLKGR 612
             SSN N I   T++  D ++ +K +
Sbjct: 210 KTSSNMN-IEFVTRYVPDSISQVKAK 234

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>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein|
           Rigui) (mPER) (M-Rigui)
          Length = 1291

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +3

Query: 471 PGCFL--LPPGAAHHCCGSRDRSQLLEQREHHHR 566
           PGC    +PPG  HHC     RS+    R HHH+
Sbjct: 817 PGCHHGPIPPGRRHHC-----RSKAKRSRHHHHQ 845

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>PMPC_CHLTR (O84419) Probable outer membrane protein pmpC precursor|
           (Polymorphic membrane protein C)
          Length = 1770

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 21/78 (26%), Positives = 37/78 (47%)
 Frame = +1

Query: 292 GLNPNPLVNISGVIGTKALAFGLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNT 471
           G+     + I+G+ GT  + F  ++A D+ +G FTK N   ++TN   +   + N+ G  
Sbjct: 312 GIYTEKSLTITGITGT--IDFVSNIATDSGAGVFTKENLSCTNTN---SLQFLKNSAGQH 366

Query: 472 LAASYYHQVQLTTAVGAE 525
              +Y  Q    T   +E
Sbjct: 367 GGGAYVTQTMSVTNTTSE 384

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>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (Haymaker protein) (p38.5)
          Length = 361

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 8/142 (5%)
 Frame = +1

Query: 184 PGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIG-------TK 342
           PGL+  +++     K    + + +Y         ++G NP+ LV  SG++        T 
Sbjct: 170 PGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLG-NPDVLVG-SGILVAHYLQSITP 227

Query: 343 ALAFGLDVAFDTASGDF-TKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVG 519
            LA G ++ +    G+  T  +    +T  +  A++ L   G  + A+YYH+      VG
Sbjct: 228 CLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAG--MHATYYHKASDQLQVG 285

Query: 520 AEIAHSFSSNENTITVGTQHEL 585
            E   S    + +++ G Q +L
Sbjct: 286 VEFEASTRMQDTSVSFGYQLDL 307

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>RFA1_PONPY (Q5R7Q4) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 616

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 25/100 (25%), Positives = 40/100 (40%)
 Frame = +1

Query: 211 PFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGD 390
           P PY +   G  + Q   P    + +    P P    SG   T + A+G    F  A+G 
Sbjct: 115 PVPYNE---GLGQPQVAPPAPAASPAASSRPQPQNGTSGAGSTVSKAYGASKTFGKAAGP 171

Query: 391 FTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTT 510
              +N+G + +     ASL       T+ A   ++ Q+ T
Sbjct: 172 SLSHNSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRT 211

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>TOM40_MOUSE (Q9QYA2) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog)
          Length = 359

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
 Frame = +1

Query: 184 PGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIG-------TK 342
           PGL+  +++     K    + + +Y         ++G NP+ LV  SG++        T 
Sbjct: 168 PGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLG-NPDVLVG-SGILVAHYLQSITP 225

Query: 343 ALAFGLDVAFDTASGDF-TKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVG 519
            LA G ++ +    G+  T  +    +T  +  A++ L   G  + A+YYH+      VG
Sbjct: 226 CLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAG--MHATYYHKASDQLQVG 283

Query: 520 AEIAHSFSSNENTITVGTQHELDPLTTL-KGRYNN 621
            E   S    + + + G Q +L     L KG  N+
Sbjct: 284 VEFEASTRMQDTSASFGYQLDLPKANFLFKGSVNS 318

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>TOM40_XENTR (Q6P825) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog)
          Length = 336

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
 Frame = +1

Query: 298 NPNPLVNISGVIG-------TKALAFGLDVAFDTASGDF-TKYNAGMSHTNQDLTASLML 453
           NP+ LV  SG++        T +LA G ++ +    G+  T  +    +T  + TA+L L
Sbjct: 182 NPDILVG-SGILVAHYLQSITPSLALGGELVYHRRPGEEGTVMSLAGRYTAPNWTATLTL 240

Query: 454 NNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQHEL 585
              G    A+YYH+      VG E   S    + +++ G Q +L
Sbjct: 241 GQAG--AHATYYHKANDQLQVGVEFEASTRMQDTSVSFGYQLDL 282

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>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (38 kDa mitochondrial outer membrane protein)
           (OM38)
          Length = 361

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
 Frame = +1

Query: 184 PGLKGVLSLPFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIG-------TK 342
           PGL+  +++     K    + + +Y         ++G NP+ LV  SG++        T 
Sbjct: 170 PGLRSKMAIQTQQSKFVNWQVDGEYRGSDFTAAVTLG-NPDVLVG-SGILVAHYLQSITP 227

Query: 343 ALAFGLDVAFDTASGDF-TKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVG 519
            LA G ++ +    G+  T  +    +T  +  A++ L   G  + A+YYH+      VG
Sbjct: 228 CLALGGELVYHRRPGEKGTVMSLAGKYTLNNWLATVTLGQAG--MHATYYHKASDQLQVG 285

Query: 520 AEIAHSFSSNENTITVGTQHELDPLTTL-KGRYNN 621
            E   S    + + + G Q +L     L KG  N+
Sbjct: 286 VEFEASTRMQDTSASFGYQLDLPKANFLFKGSVNS 320

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>FLGI_ERWCT (Q6D6H2) Flagellar P-ring protein precursor (Basal body P-ring|
           protein)
          Length = 369

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 27/69 (39%), Positives = 33/69 (47%)
 Frame = +1

Query: 310 LVNISGVIGTKALAFGLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYY 489
           LVNI GV G   + +GL V  D  SGD T        T Q LT   ML+  G T+ A   
Sbjct: 29  LVNIQGVRGNALIGYGLVVGLD-GSGDQTMQT---PFTTQSLTN--MLSQLGITVPAGTN 82

Query: 490 HQVQLTTAV 516
            Q++   AV
Sbjct: 83  MQLKNVAAV 91

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>ANR21_HUMAN (Q86YR6) Ankyrin repeat domain-containing protein 21 (Protein POTE)|
           (Prostate, ovary, testis expressed protein)
          Length = 584

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 469 CFPCCSASTKQ*DLG*YGSFQHCTW*SPQRQYQMQHQD 356
           CFPCC  S+K  ++G +G + H  +  P  +Y ++ +D
Sbjct: 105 CFPCCRGSSKS-NVGAWGDYDHSAFMEP--RYHVRRED 139

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>GLMM_PSYAR (Q4FS01) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 455

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +1

Query: 319 ISGVIGTKALAFGLDVAFDTASGDFTKYNAGMSHTNQDLTAS 444
           ++GV+GT     GL++A   A  +FT+   G  +  Q+L A+
Sbjct: 286 VAGVVGTLMSNMGLELALKAADIEFTRAKVGDRYVMQELEAN 327

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>VIRB9_AGRTU (P0A3W6) Protein virB9 precursor|
          Length = 293

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 496 VQLTTAVGAEIAHSFSSNENTITVGTQHELDPLTTLKGRY 615
           V+L+TAVGA +  +F++NE   +V   +  D     +G Y
Sbjct: 45  VRLSTAVGATLVVTFATNETVTSVAVSNSKDLAALPRGNY 84

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>VIRB9_AGRT9 (P0A3W7) Protein virB9 precursor|
          Length = 293

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 496 VQLTTAVGAEIAHSFSSNENTITVGTQHELDPLTTLKGRY 615
           V+L+TAVGA +  +F++NE   +V   +  D     +G Y
Sbjct: 45  VRLSTAVGATLVVTFATNETVTSVAVSNSKDLAALPRGNY 84

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>TOM40_XENLA (Q7ZTM6) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog)
          Length = 336

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
 Frame = +1

Query: 298 NPNPLVNISGVIG-------TKALAFGLDVAFDTASGDF-TKYNAGMSHTNQDLTASLML 453
           NP+ LV  SG++        T +LA G ++ +    G+  T  +    +T    TA+L L
Sbjct: 182 NPDILVG-SGILVAHYLQSITPSLALGGELVYHRRPGEEGTVMSLAGRYTAPSWTATLTL 240

Query: 454 NNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQHEL 585
              G    A+YYH+      +G E   S    + ++++G Q +L
Sbjct: 241 GQAG--AHATYYHKANDQLQLGVEFEASARMQDTSVSLGYQLDL 282

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>FUR_HAEDU (P71333) Ferric uptake regulation protein (Ferric uptake regulator)|
          Length = 149

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +1

Query: 397 KYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQ 576
           +Y   M H + +    L+L    +   A+ Y  +     VG  + H+F SN+    +   
Sbjct: 29  QYREEMQHFSAEDIYKLLLEQSSDIGLATVYRVLNQFEEVGILLRHNFDSNKAVFELNVD 88

Query: 577 HELD 588
           HE D
Sbjct: 89  HEHD 92

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>VIRB9_AGRT5 (P17799) Protein virB9 precursor|
          Length = 293

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +1

Query: 427 QDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQHELDPLTTLK 606
           +D   +  L+ +   LA +    V+L+TAVGA +  +F +NE    V   +  D     +
Sbjct: 22  EDTPTAGRLDPRMRYLAYNPDQVVRLSTAVGATLVVTFGANETVTAVAVSNSKDLAALPR 81

Query: 607 GRY 615
           G Y
Sbjct: 82  GNY 84

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>HIS6_BUCAI (P57206) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 258

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 271 LGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGDF--TKYNAGMSHTNQ 429
           + IN S  ++PN +  IS   G + +  G+D  FD     +   +Y   +S T Q
Sbjct: 100 ISINSSALIDPNLITKISERFGVQCVVIGIDSWFDKTKNSYMVQQYTGDISKTYQ 154

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>YA00_PYRHO (O58728) Hypothetical UPF0118 protein PH1000|
          Length = 355

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 16/56 (28%), Positives = 23/56 (41%)
 Frame = -3

Query: 476 ARVFPLLFSINEAVRSWLVWLIPALYLVKSPEAVSNATSRPKARALVPITPEMLTR 309
           A +  +LFS       W++WL  A YLVK    ++          LV   P+   R
Sbjct: 242 AGLLTVLFSFIPLFEGWMIWLAGAFYLVKQGHIIAGIGLAVYGFTLVSPLPDFTIR 297

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>TRFR_HUMAN (P34981) Thyrotropin-releasing hormone receptor (TRH-R)|
           (Thyroliberin receptor)
          Length = 398

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -3

Query: 185 GLHSSGIVIVVTTLESEVA------------FTSTVKFLIFTWVWRSLKIASFFFVLELV 42
           G+++S   I   T+E  +A            F+   K +IF W + SL    +FF+L+L 
Sbjct: 108 GINASSCSITAFTIERYIAICHPIKAQFLCTFSRAKKIIIFVWAFTSLYCMLWFFLLDLN 167

Query: 41  I 39
           I
Sbjct: 168 I 168

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>RBM7_BOVIN (Q3MHY8) RNA-binding protein 7 (RNA-binding motif protein 7)|
          Length = 262

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 397 KYNAGMSHTNQDLTASLMLNNKGNT--LAASYYHQVQLTTAVGAEIAHSFSSNEN 555
           ++ AG SH +Q+++ S   ++ GN+   + S    V   T     I  SFSS+EN
Sbjct: 83  QFRAGSSHASQEVSLSYPQHHVGNSSPTSTSPSRTVDNMTPSAQTIQRSFSSSEN 137

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>CAC1I_HUMAN (Q9P0X4) Voltage-dependent T-type calcium channel alpha-1I subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.3)
            (Ca(v)3.3)
          Length = 2223

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +2

Query: 515  WEQRSLTASRATRTPSPWGRSTSW 586
            ++QRSL++SR++    PWGRS +W
Sbjct: 962  YDQRSLSSSRSSYY-GPWGRSAAW 984

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>Y2756_YERPE (Q8ZD36) UPF0209 protein YPO2756/y1590/YP2407|
          Length = 689

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
 Frame = +1

Query: 355 GLDVAFDTASGDFTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAH 534
           GLD A D        Y AG      DLT +LM+  + N +   Y H++Q    + ++   
Sbjct: 393 GLDCAHDGIH-----YPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQL 447

Query: 535 SFSSNE-----NTITVGTQHELD--------PLTTLKGRYNN 621
           +F  ++      T+ + T H L         PL+ ++G+ ++
Sbjct: 448 TFGQSQAAKHHATVILATGHRLPEWEQTHHLPLSAVRGQVSH 489

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>HNF1B_XENLA (Q91910) Hepatocyte nuclear factor 1-beta (HNF-1B) (LFB3) (XLFB3)|
          Length = 561

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 16/65 (24%), Positives = 32/65 (49%)
 Frame = +1

Query: 424 NQDLTASLMLNNKGNTLAASYYHQVQLTTAVGAEIAHSFSSNENTITVGTQHELDPLTTL 603
           N ++T+S  +++ GN         +Q  + VG + +HS  S +  +   +   L P++TL
Sbjct: 359 NNEVTSSSTISHHGNNAMVHSQSVLQQVSPVGLDHSHSMLSPDGKLISVSGGGLPPVSTL 418

Query: 604 KGRYN 618
              +N
Sbjct: 419 TNIHN 423

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>RFA1_HUMAN (P27694) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (Single-stranded
           DNA-binding protein) (p70)
          Length = 616

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 24/100 (24%), Positives = 40/100 (40%)
 Frame = +1

Query: 211 PFPYQKSTPGKAELQYLHPHLGINGSVGLNPNPLVNISGVIGTKALAFGLDVAFDTASGD 390
           P PY +   G  + Q   P    + +    P P    SG+  T + A+G    F  A+G 
Sbjct: 115 PVPYNE---GLGQPQVAPPAPAASPAASSRPQPQNGSSGMGSTVSKAYGASKTFGKAAGP 171

Query: 391 FTKYNAGMSHTNQDLTASLMLNNKGNTLAASYYHQVQLTT 510
              + +G + +     ASL       T+ A   ++ Q+ T
Sbjct: 172 SLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRT 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.130    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,743,937
Number of Sequences: 219361
Number of extensions: 1854375
Number of successful extensions: 4434
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 4239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4407
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result