ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah63a03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel Length = 1174 Score = 936 bits (472), Expect = 0.0 Identities = 581/616 (94%), Gaps = 1/616 (0%) Strand = Plus / Plus Query: 8 accttcaccaccaccgccgccaacggagcc-caattactagttcaagcacaaagaaaaat 66 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 76 accttcaccaccaccgccgccaacggagccacaattactagttcaagcacaaagaaaaat 135 Query: 67 gaagctatcttgagcgacctccagacccaggtgaagattaagaatttcacagtggatgtg 126 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 136 gaagctatcttggctgacctccagacccaggtgaagatcaagaatttcacagtggatgtg 195 Query: 127 aaagcaacttcagactcaagtgttgtaactacaatcactattcctgagctatgcaaacca 186 ||||||||||| ||||||||||||||||||||||||||| |||||||||| | || |||| Sbjct: 196 aaagcaacttcggactcaagtgttgtaactacaatcactgttcctgagctgtacacacca 255 Query: 187 ggtttgaagggagttctttctcttcctttcccctatcagaagtctacccctgggaaggct 246 || |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 256 ggcttgaagggagttctttctcttcctttcccctaccagaagtctactcctgggaaggct 315 Query: 247 gaactccaatacttgcatccccatcttggcatcaacggcagtgttggcctgaatccaaac 306 |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 316 gaactccagtacttgcatccccatcttggcatcaacggcagtgttggcctgaattcaaac 375 Query: 307 cctcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttgatgtt 366 |||||||||||| |||||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 376 cctcttgttaacttttctggtgtcattgggactaaggcgtttgcttttggtgttgatgtt 435 Query: 367 gcatttgatactgcctctggggacttcaccaagtacaatgctggaatgagccatactaac 426 |||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct: 436 gcatttgacactgcctctggtgacttcaccaagtacaatgctggactgagccacactaac 495 Query: 427 caagatcttactgcttcgttgatgctgaacaacaagggaaacaccctggctgcttcctac 486 |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct: 496 caagatcttactgcttcgttgaatctgaacaacaaggtaaacaccctggctgcttcctac 555 Query: 487 taccaccaggtgcagctcaccactgctgtgggagcagagatcgctcacagcttctcgagc 546 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 556 taccaccaggtgcagcgcaccactgctgtgggagcagagatcgctcacagcttctcaagc 615 Query: 547 aacgagaacaccatcaccgtggggacgcagcacgagctggaccccctgaccacccttaag 606 |||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||| Sbjct: 616 aacgagaacaccatcaccattgggacgcagcacgagctggaccccctgaccactgtgaag 675 Query: 607 gggcgctacaacaact 622 ||||| |||||||||| Sbjct: 676 gggcgttacaacaact 691
>ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 212 bits (107), Expect = 1e-51 Identities = 399/494 (80%), Gaps = 8/494 (1%) Strand = Plus / Plus Query: 86 tccagacccaggtgaagattaagaatttcacagtggatgtgaaagcaacttcagactcaa 145 |||||| ||||||||||| || ||| | | |||||||||||||||||||||||||||| Sbjct: 182 tccagagccaggtgaagaacaacaatgtgtccgtggatgtgaaagcaacttcagactcaa 241 Query: 146 gtgttgtaactacaatcactattcctgagctatgcaaaccaggtttgaagggagttcttt 205 | |||||||| |||| ||| ||| || ||| ||||| |||||||| |||| | Sbjct: 242 aattgataactacattcacagttcatgatctgggcactccaggcctgaagggaattctat 301 Query: 206 ctcttcctttcccctatcagaagtctacccctgggaaggctgaactccaatacttgcatc 265 | ||||||| ||||| ||||||| ||| ||||||||| |||| |||||||||| Sbjct: 302 ccattccttttccctaccagaagt------ctgcaaaggctgaagtccagtacttgcatc 355 Query: 266 cccatcttggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctg 325 | ||| |||| | || | | ||||||||||||| |||| |||||||||| | |||||| Sbjct: 356 cacatgctggcctgaatgctattgttggcctgaatgcaaatcctcttgttagcttttctg 415 Query: 326 gtgtaattgggactaaggctcttgcttttggtcttgatgttgcatttgatactgcctctg 385 |||| |||| ||| |||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 416 gtgtgtttggaactggggcttttgctgttggtactgatgttgcatttgatactgcaactg 475 Query: 386 gggacttcaccaagtacaatgctggaatgagccatactaaccaagatcttactgcttcgt 445 |||||||||||||||||||||| ||| ||||||| |||| | |||||| ||||| | Sbjct: 476 gggacttcaccaagtacaatgcgggactgagccacactactccagatctcactgcagcac 535 Query: 446 tgatgctgaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagc-tc 504 || | ||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| Sbjct: 536 tgcttctgaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaa 594 Query: 505 accactgctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcacc 564 || | |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 595 acaagtgctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcacc 654 Query: 565 gtggggacgcagca 578 | ||||| ||||| Sbjct: 655 ttcgggacacagca 668
>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene) Length = 1189 Score = 212 bits (107), Expect = 1e-51 Identities = 399/494 (80%), Gaps = 8/494 (1%) Strand = Plus / Plus Query: 86 tccagacccaggtgaagattaagaatttcacagtggatgtgaaagcaacttcagactcaa 145 |||||| ||||||||||| || ||| | | |||||||||||||||||||||||||||| Sbjct: 221 tccagagccaggtgaagaacaacaatgtgtccgtggatgtgaaagcaacttcagactcaa 280 Query: 146 gtgttgtaactacaatcactattcctgagctatgcaaaccaggtttgaagggagttcttt 205 | |||||||| |||| ||| ||| || ||| ||||| |||||||| |||| | Sbjct: 281 aattgataactacattcacagttcatgatctgggcactccaggcctgaagggaattctat 340 Query: 206 ctcttcctttcccctatcagaagtctacccctgggaaggctgaactccaatacttgcatc 265 | ||||||| ||||| ||||||| ||| ||||||||| |||| |||||||||| Sbjct: 341 ccattccttttccctaccagaagt------ctgcaaaggctgaagtccagtacttgcatc 394 Query: 266 cccatcttggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctg 325 | ||| |||| | || | | ||||||||||||| |||| |||||||||| | |||||| Sbjct: 395 cacatgctggcctgaatgctattgttggcctgaatgcaaatcctcttgttagcttttctg 454 Query: 326 gtgtaattgggactaaggctcttgcttttggtcttgatgttgcatttgatactgcctctg 385 |||| |||| ||| |||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 455 gtgtgtttggaactggggcttttgctgttggtactgatgttgcatttgatactgcaactg 514 Query: 386 gggacttcaccaagtacaatgctggaatgagccatactaaccaagatcttactgcttcgt 445 |||||||||||||||||||||| ||| ||||||| |||| | |||||| ||||| | Sbjct: 515 gggacttcaccaagtacaatgcgggactgagccacactactccagatctcactgcagcac 574 Query: 446 tgatgctgaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagc-tc 504 || | ||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| Sbjct: 575 tgcttctgaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaa 633 Query: 505 accactgctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcacc 564 || | |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 634 acaagtgctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcacc 693 Query: 565 gtggggacgcagca 578 | ||||| ||||| Sbjct: 694 ttcgggacacagca 707
>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full insert sequence Length = 1231 Score = 212 bits (107), Expect = 1e-51 Identities = 399/494 (80%), Gaps = 8/494 (1%) Strand = Plus / Plus Query: 86 tccagacccaggtgaagattaagaatttcacagtggatgtgaaagcaacttcagactcaa 145 |||||| ||||||||||| || ||| | | |||||||||||||||||||||||||||| Sbjct: 265 tccagagccaggtgaagaacaacaatgtgtccgtggatgtgaaagcaacttcagactcaa 324 Query: 146 gtgttgtaactacaatcactattcctgagctatgcaaaccaggtttgaagggagttcttt 205 | |||||||| |||| ||| ||| || ||| ||||| |||||||| |||| | Sbjct: 325 aattgataactacattcacagttcatgatctgggcactccaggcctgaagggaattctat 384 Query: 206 ctcttcctttcccctatcagaagtctacccctgggaaggctgaactccaatacttgcatc 265 | ||||||| ||||| ||||||| ||| ||||||||| |||| |||||||||| Sbjct: 385 ccattccttttccctaccagaagt------ctgcaaaggctgaagtccagtacttgcatc 438 Query: 266 cccatcttggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctg 325 | ||| |||| | || | | ||||||||||||| |||| |||||||||| | |||||| Sbjct: 439 cacatgctggcctgaatgctattgttggcctgaatgcaaatcctcttgttagcttttctg 498 Query: 326 gtgtaattgggactaaggctcttgcttttggtcttgatgttgcatttgatactgcctctg 385 |||| |||| ||| |||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct: 499 gtgtgtttggaactggggcttttgctgttggtactgatgttgcatttgatactgcaactg 558 Query: 386 gggacttcaccaagtacaatgctggaatgagccatactaaccaagatcttactgcttcgt 445 |||||||||||||||||||||| ||| ||||||| |||| | |||||| ||||| | Sbjct: 559 gggacttcaccaagtacaatgcgggactgagccacactactccagatctcactgcagcac 618 Query: 446 tgatgctgaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagc-tc 504 || | ||||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| Sbjct: 619 tgcttctgaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaa 677 Query: 505 accactgctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcacc 564 || | |||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 678 acaagtgctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcacc 737 Query: 565 gtggggacgcagca 578 | ||||| ||||| Sbjct: 738 ttcgggacacagca 751
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 133 bits (67), Expect = 8e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 242 aggctgaactccaatacttgcatccccatcttggcatcaacggcagtgttggcctgaatc 301 |||||||| |||| ||||||||||| ||| |||| | || | | ||||||||||||| Sbjct: 68176 aggctgaagtccagtacttgcatccacatgctggcctgaatgctattgttggcctgaatg 68235 Query: 302 caaaccctcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttg 361 |||| |||||||||| | |||||||||| |||| ||| |||| ||||| ||||| || Sbjct: 68236 caaatcctcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactg 68295 Query: 362 atgttgcatttgatactgcctctggggacttcaccaagtacaatgctggaatgagccata 421 ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| | Sbjct: 68296 atgttgcatttgatactgcaactggggacttcaccaagtacaatgcgggactgagccaca 68355 Query: 422 cta 424 ||| Sbjct: 68356 cta 68358 Score = 93.7 bits (47), Expect = 7e-16 Identities = 109/127 (85%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 453 gaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagctcaccac-tg 511 ||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| | || || Sbjct: 68774 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaaacaagtg 68832 Query: 512 ctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcaccgtgggga 571 |||| ||||||||| | ||||||||||||||||||||||||||||| ||||| | |||| Sbjct: 68833 ctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggga 68892 Query: 572 cgcagca 578 | ||||| Sbjct: 68893 cacagca 68899 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 86 tccagacccaggtgaagattaagaatttcacagtggatgtgaaagcaacttcagactcaa 145 |||||| ||||||||||| || ||| | | |||||||||||||||||||||||||||| Sbjct: 67807 tccagagccaggtgaagaacaacaatgtgtccgtggatgtgaaagcaacttcagactcaa 67866
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 133 bits (67), Expect = 8e-28 Identities = 154/183 (84%) Strand = Plus / Plus Query: 242 aggctgaactccaatacttgcatccccatcttggcatcaacggcagtgttggcctgaatc 301 |||||||| |||| ||||||||||| ||| |||| | || | | ||||||||||||| Sbjct: 26423485 aggctgaagtccagtacttgcatccacatgctggcctgaatgctattgttggcctgaatg 26423544 Query: 302 caaaccctcttgttaacatttctggtgtaattgggactaaggctcttgcttttggtcttg 361 |||| |||||||||| | |||||||||| |||| ||| |||| ||||| ||||| || Sbjct: 26423545 caaatcctcttgttagcttttctggtgtgtttggaactggggcttttgctgttggtactg 26423604 Query: 362 atgttgcatttgatactgcctctggggacttcaccaagtacaatgctggaatgagccata 421 ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| | Sbjct: 26423605 atgttgcatttgatactgcaactggggacttcaccaagtacaatgcgggactgagccaca 26423664 Query: 422 cta 424 ||| Sbjct: 26423665 cta 26423667 Score = 93.7 bits (47), Expect = 7e-16 Identities = 109/127 (85%), Gaps = 2/127 (1%) Strand = Plus / Plus Query: 453 gaacaacaagggaaacaccctggctgcttcctactaccaccaggtgcagctcaccac-tg 511 ||||||||||||| ||| ||| |||||||||||||||||| ||||| ||| | || || Sbjct: 26424083 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg-agcaaaacaagtg 26424141 Query: 512 ctgtgggagcagagatcgctcacagcttctcgagcaacgagaacaccatcaccgtgggga 571 |||| ||||||||| | ||||||||||||||||||||||||||||| ||||| | |||| Sbjct: 26424142 ctgttggagcagagctggctcacagcttctcgagcaacgagaacactctcaccttcggga 26424201 Query: 572 cgcagca 578 | ||||| Sbjct: 26424202 cacagca 26424208 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 320 tttctggtgtaattgggactaaggctcttgcttttggtcttgatgttgcatttgatactg 379 |||||||||| |||| ||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 20516254 tttctggtgtgtttggaactggggcttttgctgttggtactgatgttgcatttgatactg 20516195 Query: 380 cctctggggacttcaccaagtacaatgc 407 | ||| ||||||||||||||||||| Sbjct: 20516194 cgagtggaaacttcaccaagtacaatgc 20516167 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 453 gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 498 ||||||||||||| ||| ||| |||||||||||||||||| ||||| Sbjct: 25619625 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 25619670 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 86 tccagacccaggtgaagattaagaatttcacagtggatgtgaaagcaacttcagactcaa 145 |||||| ||||||||||| || ||| | | |||||||||||||||||||||||||||| Sbjct: 26423116 tccagagccaggtgaagaacaacaatgtgtccgtggatgtgaaagcaacttcagactcaa 26423175 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aattactagttcaagcacaaa 59 ||||||||||||||||||||| Sbjct: 28408490 aattactagttcaagcacaaa 28408510
>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1129 Score = 111 bits (56), Expect = 3e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 286 agtgttggcctgaatccaaaccctcttgttaacatttctggtgtaattgggactaaggct 345 ||||||||||| ||| |||||||| |||||||| ||||||||||| | || ||||| ||| Sbjct: 450 agtgttggcctaaatgcaaaccctgttgttaacctttctggtgtattcggaactaaagct 509 Query: 346 cttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaat 405 ||||| |||| ||||| ||||||||||||| | ||||||||||| ||||| |||||| Sbjct: 510 attgctgttggcgctgatgctgcatttgatacttcttctggggacttaaccaaatacaat 569 Query: 406 gctggaatgagc 417 |||||| ||||| Sbjct: 570 gctggactgagc 581 Score = 75.8 bits (38), Expect = 2e-10 Identities = 150/186 (80%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 12 tcaccaccaccgccgccaacggagcc-caattactagttcaagcacaaagaaaaatgaag 70 |||||||| ||||||||||||||| | |||||| | ||||||| | |||| |||||| Sbjct: 181 tcaccacctacgccgccaacggagctgccattactgctgcaagcacgaggaaagatgaag 240 Query: 71 ctatcttgagcgacctccagacccaggtgaagattaagaatttcacagtggatgtgaaag 130 ||||||| | || |||||| |||| ||||| || ||| | || ||||||||||||| Sbjct: 241 ctatctttaatgaaatccagagccagctgaagcacaacaatgtgactgtggatgtgaaag 300 Query: 131 caacttcagactcaagtgttgtaactacaatcactattcctgagctatgcaaaccaggtt 190 |||||||||| |||| ||| ||||||||||||| ||| |||||| ||| |||||| | Sbjct: 301 caacttcagaatcaaatgtgataactacaatcacagttcatgagctgggcacaccaggct 360 Query: 191 tgaagg 196 |||||| Sbjct: 361 tgaagg 366 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||||| ||||||||||||| | ||||||||||| | |||||||| Sbjct: 696 cacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctggaccct 755 Query: 592 ctgaccac 599 |||||||| Sbjct: 756 ctgaccac 763
>gb|AY104198.1| Zea mays PCO099812 mRNA sequence Length = 1156 Score = 111 bits (56), Expect = 3e-21 Identities = 113/132 (85%) Strand = Plus / Plus Query: 286 agtgttggcctgaatccaaaccctcttgttaacatttctggtgtaattgggactaaggct 345 ||||||||||| ||| |||||||| |||||||| ||||||||||| | || ||||| ||| Sbjct: 484 agtgttggcctaaatgcaaaccctgttgttaacctttctggtgtattcggaactaaagct 543 Query: 346 cttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaat 405 ||||| |||| ||||| ||||||||||||| | ||||||||||| ||||| |||||| Sbjct: 544 attgctgttggcgctgatgctgcatttgatacttcttctggggacttaaccaaatacaat 603 Query: 406 gctggaatgagc 417 |||||| ||||| Sbjct: 604 gctggactgagc 615 Score = 75.8 bits (38), Expect = 2e-10 Identities = 150/186 (80%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 12 tcaccaccaccgccgccaacggagcc-caattactagttcaagcacaaagaaaaatgaag 70 |||||||| ||||||||||||||| | |||||| | ||||||| | |||| |||||| Sbjct: 215 tcaccacctacgccgccaacggagctgccattactgctgcaagcacgaggaaagatgaag 274 Query: 71 ctatcttgagcgacctccagacccaggtgaagattaagaatttcacagtggatgtgaaag 130 ||||||| | || |||||| |||| ||||| || ||| | || ||||||||||||| Sbjct: 275 ctatctttaatgaaatccagagccagctgaagcacaacaatgtgactgtggatgtgaaag 334 Query: 131 caacttcagactcaagtgttgtaactacaatcactattcctgagctatgcaaaccaggtt 190 |||||||||| |||| ||| ||||||||||||| ||| |||||| ||| |||||| | Sbjct: 335 caacttcagaatcaaatgtgataactacaatcacagttcatgagctgggcacaccaggct 394 Query: 191 tgaagg 196 |||||| Sbjct: 395 tgaagg 400 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||||| ||||||||||||| | ||||||||||| | |||||||| Sbjct: 730 cacagcttctcgaccaacgggaacaccatcacctttgggacgcagcatgccctggaccct 789 Query: 592 ctgaccac 599 |||||||| Sbjct: 790 ctgaccac 797
>ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 tgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||||| |||||||| | |||||||||||||||||||| |||||||| Sbjct: 555 tgatgttgcagttgatacttctactggggacttcaccaagtacgatgctgga 606 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||| ||||||||| ||| | | |||| |||||||| |||||||| Sbjct: 733 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 792 Query: 592 ctgaccacccttaaggggcgctacaacaac 621 || || ||| | |||| ||||||||||||| Sbjct: 793 ctcactaccgtgaaggcgcgctacaacaac 822 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 50 caagcacaaagaaaaatgaagctatcttgagcgacctccagacccaggtgaaga 103 ||||||||| |||| ||||||||||||| ||||| |||||||| || |||||| Sbjct: 251 caagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaaga 304 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 236 ctgggaaggctgaactccaatacttgcat 264 ||||||||||||||||||| ||| ||||| Sbjct: 431 ctgggaaggctgaactccagtacctgcat 459
>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092E21, complete sequence Length = 132649 Score = 63.9 bits (32), Expect = 6e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 320 tttctggtgtaattgggactaaggctcttgcttttggtcttgatgttgcatttgatactg 379 |||||||||| |||| ||| |||| ||||| ||||| |||||||||||||||||||| Sbjct: 59733 tttctggtgtgtttggaactggggcttttgctgttggtactgatgttgcatttgatactg 59674 Query: 380 cctctggggacttcaccaagtacaatgc 407 | ||| ||||||||||||||||||| Sbjct: 59673 cgagtggaaacttcaccaagtacaatgc 59646
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 tgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||||| |||||||| | |||||||||||||||||||| |||||||| Sbjct: 29764358 tgatgttgcagttgatacttctactggggacttcaccaagtacgatgctgga 29764307 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||| ||||||||| ||| | | |||| |||||||| |||||||| Sbjct: 29763959 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 29763900 Query: 592 ctgaccacccttaaggggcgctacaacaac 621 || || ||| | |||| ||||||||||||| Sbjct: 29763899 ctcactaccgtgaaggcgcgctacaacaac 29763870 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 50 caagcacaaagaaaaatgaagctatcttgagcgacctccagacccaggtgaaga 103 ||||||||| |||| ||||||||||||| ||||| |||||||| || |||||| Sbjct: 29764892 caagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaaga 29764839 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ttcacagtggatgtgaaagcaa 133 |||||||||||||||||||||| Sbjct: 8003114 ttcacagtggatgtgaaagcaa 8003093 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 22905311 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 22905255 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 22905231 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 22905175
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 tgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||||| |||||||| | |||||||||||||||||||| |||||||| Sbjct: 8453 tgatgttgcagttgatacttctactggggacttcaccaagtacgatgctgga 8402 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||| ||||||||| ||| | | |||| |||||||| |||||||| Sbjct: 8054 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 7995 Query: 592 ctgaccacccttaaggggcgctacaacaac 621 || || ||| | |||| ||||||||||||| Sbjct: 7994 ctcactaccgtgaaggcgcgctacaacaac 7965 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 50 caagcacaaagaaaaatgaagctatcttgagcgacctccagacccaggtgaaga 103 ||||||||| |||| ||||||||||||| ||||| |||||||| || |||||| Sbjct: 8987 caagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaaga 8934
>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131B07 Length = 109135 Score = 63.9 bits (32), Expect = 6e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 360 tgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||||| |||||||| | |||||||||||||||||||| |||||||| Sbjct: 94089 tgatgttgcagttgatacttctactggggacttcaccaagtacgatgctgga 94038 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 532 cacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcacgagctggacccc 591 ||||||||||||| ||| ||||||||| ||| | | |||| |||||||| |||||||| Sbjct: 93690 cacagcttctcgaccaaggagaacaccctcagcttcgggatgcagcacgccctggaccct 93631 Query: 592 ctgaccacccttaaggggcgctacaacaac 621 || || ||| | |||| ||||||||||||| Sbjct: 93630 ctcactaccgtgaaggcgcgctacaacaac 93601 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 50 caagcacaaagaaaaatgaagctatcttgagcgacctccagacccaggtgaaga 103 ||||||||| |||| ||||||||||||| ||||| |||||||| || |||||| Sbjct: 94623 caagcacaatgaaagatgaagctatctttagcgagatccagaccaagctgaaga 94570
>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04, complete sequence Length = 169073 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 453 gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 498 ||||||||||||| ||| ||| |||||||||||||||||| ||||| Sbjct: 136032 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 136077
>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07, complete sequence Length = 147122 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 453 gaacaacaagggaaacaccctggctgcttcctactaccaccaggtg 498 ||||||||||||| ||| ||| |||||||||||||||||| ||||| Sbjct: 31994 gaacaacaagggagacagccttgctgcttcctactaccacaaggtg 32039
>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence Length = 1330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 368 catttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||| ||||| ||||| |||||||||| |||||||||||| Sbjct: 592 catttgattctgccactgggaacttcaccaaatacaatgctgga 635
>gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, complete cds Length = 1069 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 368 catttgatactgcctctggggacttcaccaagtacaatgc 407 ||||||||||||||||||| |||| |||||||||||||| Sbjct: 468 catttgatactgcctctggcaactttaccaagtacaatgc 507
>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1175 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 368 catttgatactgcctctggggacttcaccaagtacaatgctgga 411 |||||||| ||||| ||||| |||||||||| |||||||||||| Sbjct: 587 catttgattctgccactgggaacttcaccaaatacaatgctgga 630
>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence Length = 178254 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgttgcatttg 373 ||||||||||||||||||||||||||| Sbjct: 11570 ttgcttttggtcttgatgttgcatttg 11596
>gb|AC167566.1| Mus musculus BAC clone RP24-84B10 from chromosome 14, complete sequence Length = 187792 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 347 ttgcttttggtcttgatgttgcatttg 373 ||||||||||||||||||||||||||| Sbjct: 13863 ttgcttttggtcttgatgttgcatttg 13837
>emb|Z25540.1|PSPOR1MR P.sativum pspor1 mRNA encoding porin Length = 1149 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 284 gcagtgttggcctgaatccaaaccctcttgttaacatttctggtgtaattgggactaagg 343 |||||||||| |||| ||||||| |||| ||| ||||| |||| ||||| ||||| | Sbjct: 407 gcagtgttgggttgaaagcaaacccaattgtcaacttttctagtgttattggaactaatg 466 Query: 344 ctcttgcttttggt 357 |||||||||||||| Sbjct: 467 ctcttgcttttggt 480
>ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 693 cacagcttctcgagcaacgagaactccctcacc 725 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 498 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 557 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 558 tataatgctggattgagc 575 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 121 gatgtgaaagcaacttcagactcaagtgttgtaactac 158 ||||||||||||| |||||||||| |||||| ||||| Sbjct: 288 gatgtgaaagcaaactcagactcaaatgttgttactac 325
>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence Length = 1095 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 531 tcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcac 579 |||||||||||| | ||| ||||||| |||||||||||| || |||||| Sbjct: 658 tcacagcttctctaccaatgagaacatcatcaccgtgggtactcagcac 706 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 caaaccctcttgttaacatttctggtgta 330 |||||||| |||||||| ||||||||||| Sbjct: 423 caaaccctattgttaacttttctggtgta 451
>gb|AC025039.7| Homo sapiens chromosome 10 clone RP11-457M15, complete sequence Length = 172790 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 140 actcaagtgttgtaactacaatcac 164 ||||||||||||||||||||||||| Sbjct: 92001 actcaagtgttgtaactacaatcac 91977
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 11754735 cacagcttctcgagcaacgagaactccctcacc 11754767 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 11753896 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 11753955 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 11753956 tataatgctggattgagc 11753973 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 20955396 ccttcaccaccaccgccgcc 20955377
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 189369 cacagcttctcgagcaacgagaactccctcacc 189401 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 188530 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 188589 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 188590 tataatgctggattgagc 188607
>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel Length = 1093 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 630 cacagcttctcgagcaacgagaactccctcacc 662 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 435 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 494 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 495 tataatgctggattgagc 512 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 121 gatgtgaaagcaacttcagactcaagtgttgtaactac 158 ||||||||||||| |||||||||| |||||| ||||| Sbjct: 225 gatgtgaaagcaaactcagactcaaatgttgttactac 262
>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full insert sequence Length = 3071 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 2640 cacagcttctcgagcaacgagaactccctcacc 2672 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 1801 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 1860 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 1861 tataatgctggattgagc 1878
>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full insert sequence Length = 1125 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 693 cacagcttctcgagcaacgagaactccctcacc 725 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 498 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 557 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 558 tataatgctggattgagc 575 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 121 gatgtgaaagcaacttcagactcaagtgttgtaactac 158 ||||||||||||| |||||||||| |||||| ||||| Sbjct: 288 gatgtgaaagcaaactcagactcaaatgttgttactac 325
>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full insert sequence Length = 1242 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaacaccatcacc 564 |||||||||||||||||||||||| || ||||| Sbjct: 707 cacagcttctcgagcaacgagaactccctcacc 739 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 340 aaggctcttgcttttggtcttgatgttgcatttgatactgcctctggggacttcaccaag 399 |||||||||||| ||||| |||||| || ||||||| ||| | ||| |||| ||||| Sbjct: 512 aaggctcttgctgttggtgctgatgtctcacttgataccgccacggggaacttgaccaaa 571 Query: 400 tacaatgctggaatgagc 417 || ||||||||| ||||| Sbjct: 572 tataatgctggattgagc 589 Score = 44.1 bits (22), Expect = 0.54 Identities = 34/38 (89%) Strand = Plus / Plus Query: 121 gatgtgaaagcaacttcagactcaagtgttgtaactac 158 ||||||||||||| |||||||||| |||||| ||||| Sbjct: 302 gatgtgaaagcaaactcagactcaaatgttgttactac 339
>ref|NM_188747.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1032 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 112 ttcacagtggatgtgaaagcaa 133 |||||||||||||||||||||| Sbjct: 998 ttcacagtggatgtgaaagcaa 1019
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 404 atgctggaatgagccatactaaccaa 429 |||||||||||| ||||||||||||| Sbjct: 5605 atgctggaatgatccatactaaccaa 5580
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 accttcaccaccaccgccgcca 29 |||||||||||||||||||||| Sbjct: 7848622 accttcaccaccaccgccgcca 7848643
>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1008C01 Length = 144141 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 112 ttcacagtggatgtgaaagcaa 133 |||||||||||||||||||||| Sbjct: 109426 ttcacagtggatgtgaaagcaa 109405
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 8 accttcaccaccaccgccgcca 29 |||||||||||||||||||||| Sbjct: 7848503 accttcaccaccaccgccgcca 7848524
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 8 accttcaccaccaccgccgcca 29 |||||||||||||||||||||| Sbjct: 151548 accttcaccaccaccgccgcca 151527
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA Length = 1159 Score = 44.1 bits (22), Expect = 0.54 Identities = 37/42 (88%) Strand = Plus / Plus Query: 451 ctgaacaacaagggaaacaccctggctgcttcctactaccac 492 ||||||||||||||| ||| |||| |||| ||||| |||||| Sbjct: 574 ctgaacaacaagggagacagcctgactgcatcctattaccac 615 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 cacagcttctcgagcaacgagaaca 556 ||||||||||| ||||||||||||| Sbjct: 658 cacagcttctcaagcaacgagaaca 682
>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete sequence Length = 151891 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 404 atgctggaatgagccatactaaccaa 429 |||||||||||| ||||||||||||| Sbjct: 91163 atgctggaatgatccatactaaccaa 91138
>ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 828 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 422 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 478 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 342 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 398
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 aattactagttcaagcacaaa 59 ||||||||||||||||||||| Sbjct: 43414 aattactagttcaagcacaaa 43434
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 gtcttgatgttgcatttgata 376 ||||||||||||||||||||| Sbjct: 61781 gtcttgatgttgcatttgata 61801
>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence Length = 1133 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 530 ctcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagca 578 ||||||||||||| ||||| |||||||| ||||| | ||||| ||||| Sbjct: 683 ctcacagcttctcaagcaatgagaacacactcaccattgggacacagca 731
>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence Length = 178925 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 gtcttgatgttgcatttgata 376 ||||||||||||||||||||| Sbjct: 38595 gtcttgatgttgcatttgata 38615
>gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, complete sequence Length = 204022 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgttg 367 ||||||||||||||||||||| Sbjct: 16911 ttgcttttggtcttgatgttg 16931
>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII Length = 1060 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 530 ctcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagca 578 ||||||||||||| ||||| |||||||| ||||| | ||||| ||||| Sbjct: 651 ctcacagcttctcaagcaatgagaacacactcaccattgggacacagca 699
>emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial 34kDa porin Length = 1210 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 531 tcacagcttctcgagcaacgagaacaccatcaccgtggggacgcagcac 579 |||||||||||| | ||| ||||||| ||| |||||||| || |||||| Sbjct: 659 tcacagcttctccaccaatgagaacatcattaccgtgggtactcagcac 707 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 302 caaaccctcttgttaacatttctggtgta 330 |||||||| |||||||| ||||||||||| Sbjct: 424 caaaccctattgttaacttttctggtgta 452
>gb|AC093122.12| Homo sapiens 12 BAC RP11-317E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 108125 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 55 acaaagaaaaatgaagctatcttga 79 |||||||||||||| |||||||||| Sbjct: 99949 acaaagaaaaatgaggctatcttga 99925
>gb|DP000031.1| Dasypus novemcinctus target 116 genomic scaffold Length = 288075 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 aaagaaaaatgaagctatctt 77 ||||||||||||||||||||| Sbjct: 216460 aaagaaaaatgaagctatctt 216480
>gb|AC108034.2| Homo sapiens BAC clone RP11-137J16 from 4, complete sequence Length = 164396 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 aagcacaaagaaaaatgaagc 71 ||||||||||||||||||||| Sbjct: 86579 aagcacaaagaaaaatgaagc 86559
>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0700A11 Length = 136321 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 108868 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 108812 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 108788 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 108732
>gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y, complete sequence Length = 168066 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 gtcttgatgttgcatttgata 376 ||||||||||||||||||||| Sbjct: 105087 gtcttgatgttgcatttgata 105067
>emb|X82148.1|TAVDAC3 T.aestivum VDAC3 mRNA for voltage dependent anion channel Length = 1208 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 286 agtgttggcctgaatccaaaccctcttgttaacatttctggtgta 330 |||||||| ||||| || |||||| | |||||| ||||||||||| Sbjct: 433 agtgttgggctgaacccgaaccctatggttaacctttctggtgta 477
>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene) Length = 1148 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 495 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 551 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 415 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 471
>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full insert sequence Length = 1151 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 500 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 556 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 420 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 476
>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full insert sequence Length = 1160 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 511 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 567 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 431 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 487
>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full insert sequence Length = 1216 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 353 ttggtcttgatgttgcatttgatactgcctctggggacttcaccaagtacaatgctg 409 ||||| ||||||||||||| || ||||| || | | ||||||||||||||||||| Sbjct: 555 ttggtgttgatgttgcattcgacactgcgactagcaatttcaccaagtacaatgctg 611 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 273 tggcatcaacggcagtgttggcctgaatccaaaccctcttgttaacatttctggtgt 329 ||||||||| | ||||||||||||||| | || ||| | |||||| |||||||||| Sbjct: 475 tggcatcaatgcaagtgttggcctgaattccaatcctatggttaacctttctggtgt 531
>emb|AJ890364.1| Emiliania huxleyi virus 86 isolate EhV86 Length = 407339 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 5 gttaccttcaccaccaccgccgcca 29 ||||| ||||||||||||||||||| Sbjct: 128398 gttacgttcaccaccaccgccgcca 128422
>emb|AL691500.7| Mouse DNA sequence from clone RP23-182H15 on chromosome X, complete sequence Length = 196828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 tcagaagtctacccctgggaa 242 ||||||||||||||||||||| Sbjct: 16307 tcagaagtctacccctgggaa 16327
>gb|AY727634.1| Arabidopsis thaliana ecotype PHW-1 SHATTERPROOF1 (SHP1) gene, complete cds Length = 4548 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aagcacaaagaaaaatgaag 70 |||||||||||||||||||| Sbjct: 53 aagcacaaagaaaaatgaag 72
>gb|AY727630.1| Arabidopsis thaliana ecotype Mt-0 SHATTERPROOF1 (SHP1) gene, complete cds Length = 4592 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aagcacaaagaaaaatgaag 70 |||||||||||||||||||| Sbjct: 62 aagcacaaagaaaaatgaag 81
>ref|NM_197757.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBb0089A17.15), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 188 ccttcaccaccaccgccgcc 169
>ref|XM_464533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 caccaccaccgccgccaacg 32 |||||||||||||||||||| Sbjct: 769 caccaccaccgccgccaacg 750
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ttctttctcttcctttcccc 219 |||||||||||||||||||| Sbjct: 241529 ttctttctcttcctttcccc 241510
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 gttctttctcttcctttccc 218 |||||||||||||||||||| Sbjct: 10480 gttctttctcttcctttccc 10499
>gb|AC110177.19| Mus musculus chromosome 1, clone RP24-245K23, complete sequence Length = 165052 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 67954 ttgcttttggtcttgatgtt 67935
>gb|AC147048.2| Mus musculus BAC clone RP23-91H23 from chromosome 8, complete sequence Length = 124152 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ttctttctcttcctttcccc 219 |||||||||||||||||||| Sbjct: 45741 ttctttctcttcctttcccc 45760
>gb|AC122234.4| Mus musculus BAC clone RP23-138M13 from chromosome 1, complete sequence Length = 175090 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 37731 ttgcttttggtcttgatgtt 37750
>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome Length = 1044459 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 ctcgagcaacgagaacaccatcac 563 ||||||||||||| |||||||||| Sbjct: 742975 ctcgagcaacgaggacaccatcac 742998
>gb|DQ491001.1| Chlorella virus MT325 ctg_71 genomic sequence Length = 314335 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 caccaccaccgccgccaacg 32 |||||||||||||||||||| Sbjct: 245534 caccaccaccgccgccaacg 245515
>gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosome 17, complete sequence Length = 197522 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 200 ttctttctcttcctttcccctatcagaa 227 ||||||||||||||||| || ||||||| Sbjct: 84770 ttctttctcttcctttctcccatcagaa 84743
>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence Length = 190381 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tcctgagctatgcaaaccag 187 |||||||||||||||||||| Sbjct: 71020 tcctgagctatgcaaaccag 71039
>emb|X86209.1|CFGTLE042 C.familiaris GT repeat sequence Length = 246 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 222 ccttcaccaccaccgccgcc 203
>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence Length = 231059 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 gttctttctcttcctttccc 218 |||||||||||||||||||| Sbjct: 145356 gttctttctcttcctttccc 145337
>gb|AC118689.16| Mus musculus chromosome 10, clone RP23-293N21, complete sequence Length = 163917 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ttctttctcttcctttcccc 219 |||||||||||||||||||| Sbjct: 50599 ttctttctcttcctttcccc 50618
>emb|CR962134.2| Medicago truncatula chromosome 5 clone mte1-40n1, COMPLETE SEQUENCE Length = 139651 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 69357 ccttcaccaccaccgccgcc 69338
>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence Length = 193083 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tcctgagctatgcaaaccag 187 |||||||||||||||||||| Sbjct: 32644 tcctgagctatgcaaaccag 32663
>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete sequence Length = 202424 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ccactgctgtgggagcagag 525 |||||||||||||||||||| Sbjct: 36936 ccactgctgtgggagcagag 36917
>gb|AC125172.4| Mus musculus BAC clone RP24-492I4 from chromosome 14, complete sequence Length = 179789 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 ccactgctgtgggagcagag 525 |||||||||||||||||||| Sbjct: 25928 ccactgctgtgggagcagag 25947
>ref|XM_663153.1| Cryptosporidium hominis TU502 DNA topoisomerase I (Chro.70373) partial mRNA Length = 1926 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagttctttctcttccttt 215 |||||||||||||||||||| Sbjct: 460 ggagttctttctcttccttt 441
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccaccaccgccgccaacgga 34 |||||||||||||||||||| Sbjct: 2361245 ccaccaccgccgccaacgga 2361264
>emb|AL671968.17| Mouse DNA sequence from clone RP23-191E3 on chromosome 11 Contains four novel genes, an eukaryotic translation elongation factor 2 (Eef2) pseudogene, a Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (Fau) pseudogene, the Eif4enif1 gene for eukaryotic translation initiation factor 4E nuclear import factor 1, the Drg1 gene for developmentally regulated GTP binding protein 1, the Zfp278 gene for zinc finger protein 278, the 3' end of the Limk2 gene LIM motif-containing protein kinase 2 and five CpG islands, complete sequence Length = 214546 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cttcaccaccaccgccgcca 29 |||||||||||||||||||| Sbjct: 69514 cttcaccaccaccgccgcca 69533
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 111711 ttgcttttggtcttgatgtt 111692
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aagcacaaagaaaaatgaag 70 |||||||||||||||||||| Sbjct: 37150 aagcacaaagaaaaatgaag 37169
>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1, complete sequence Length = 213398 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 tccaaaccctcttgttaacatttc 323 |||||||||||||||| ||||||| Sbjct: 170155 tccaaaccctcttgttgacatttc 170132
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 tcctgagctatgcaaaccag 187 |||||||||||||||||||| Sbjct: 133889 tcctgagctatgcaaaccag 133908
>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI Length = 1030 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 530 ctcacagcttctcgagcaacgagaacac 557 ||||||||||||| ||||| |||||||| Sbjct: 611 ctcacagcttctcaagcaatgagaacac 638
>dbj|AP006335.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT03N08, TM0292, complete sequence Length = 95495 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tcaccaccaccgccgccaac 31 |||||||||||||||||||| Sbjct: 56606 tcaccaccaccgccgccaac 56587
>dbj|AK128990.1| Mus musculus cDNA fis, clone TRACH3022875, highly similar to Homo sapiens eukaryotic translation initiation factor 4E nuclear import factor 1 (EIF4ENIF1) Length = 3710 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cttcaccaccaccgccgcca 29 |||||||||||||||||||| Sbjct: 286 cttcaccaccaccgccgcca 305
>gb|AC084346.3| Homo sapiens chromosome 8, clone RP3-388N13, complete sequence Length = 128437 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 atgtgaaagcaacttcagac 141 |||||||||||||||||||| Sbjct: 111914 atgtgaaagcaacttcagac 111895
>gb|AF391290.1| Branchiostoma floridae cosmid MPMGc117C0475, partial sequence Length = 47933 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 gttaccttcaccaccaccgccgcc 28 |||||| ||||||||||||||||| Sbjct: 40817 gttaccctcaccaccaccgccgcc 40840
>gb|AC103792.2| Homo sapiens chromosome 11, clone CTD-2384B9, complete sequence Length = 115626 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 tttctcttcctttcccctat 222 |||||||||||||||||||| Sbjct: 57482 tttctcttcctttcccctat 57463 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 tttctcttcctttcccctat 222 |||||||||||||||||||| Sbjct: 57406 tttctcttcctttcccctat 57387
>dbj|AK159001.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530026P09 product:unclassifiable, full insert sequence Length = 3767 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 2847 ttgcttttggtcttgatgtt 2866
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 102463 ccttcaccaccaccgccgcc 102444
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 21670559 ccttcaccaccaccgccgcc 21670540
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 gtttgaagggagttctttctcttc 211 ||||| |||||||||||||||||| Sbjct: 12639459 gtttggagggagttctttctcttc 12639436 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 caccaccaccgccgccaacg 32 |||||||||||||||||||| Sbjct: 5755955 caccaccaccgccgccaacg 5755974
>gb|AC099850.7| Homo sapiens chromosome 17, clone CTD-2510F5, complete sequence Length = 210344 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tatgcaaaccaggtttgaag 195 |||||||||||||||||||| Sbjct: 79414 tatgcaaaccaggtttgaag 79433
>emb|BX842670.5| Zebrafish DNA sequence from clone DKEY-195A13 in linkage group 20, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 cttgttaacatttctggtgtaatt 333 ||||||||||||| |||||||||| Sbjct: 56755 cttgttaacatttgtggtgtaatt 56778
>gb|AC005866.4| Homo sapiens 12 BAC RP11-407G6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 119388 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 cttcaccaccaccgccgcca 29 |||||||||||||||||||| Sbjct: 30421 cttcaccaccaccgccgcca 30402
>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome Length = 1042519 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 540 ctcgagcaacgagaacaccatcac 563 ||||||||||||| |||||||||| Sbjct: 740249 ctcgagcaacgaggacaccatcac 740272
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 47485 ccttcaccaccaccgccgcc 47466
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 gtttgaagggagttctttctcttc 211 ||||| |||||||||||||||||| Sbjct: 36518 gtttggagggagttctttctcttc 36495
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 caccaccaccgccgccaacg 32 |||||||||||||||||||| Sbjct: 45469 caccaccaccgccgccaacg 45488
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 gtttgaagggagttctttctcttc 211 ||||| |||||||||||||||||| Sbjct: 143992 gtttggagggagttctttctcttc 143969
>dbj|AK130931.1| Homo sapiens cDNA FLJ27421 fis, clone WMC07981 Length = 1741 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 cttcaccaccaccgccgcca 29 |||||||||||||||||||| Sbjct: 427 cttcaccaccaccgccgcca 446
>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence Length = 202273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ccactgctgtgggagcagag 525 |||||||||||||||||||| Sbjct: 12704 ccactgctgtgggagcagag 12685
>gb|AC140552.3| Mus musculus BAC clone RP24-372G15 from 8, complete sequence Length = 130431 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ttctttctcttcctttcccc 219 |||||||||||||||||||| Sbjct: 91248 ttctttctcttcctttcccc 91267
>gb|AY106124.1| Zea mays PCO123686 mRNA sequence Length = 926 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 469 accctggctgcttcctactaccac 492 ||||||||||| |||||||||||| Sbjct: 669 accctggctgcgtcctactaccac 692
>emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on chromosome 14, complete sequence Length = 201441 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 ccactgctgtgggagcagag 525 |||||||||||||||||||| Sbjct: 181856 ccactgctgtgggagcagag 181837
>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151057 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 135164 ttgcttttggtcttgatgtt 135145
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 ccttcaccaccaccgccgcc 28 |||||||||||||||||||| Sbjct: 21682222 ccttcaccaccaccgccgcc 21682203
>gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosome 13, complete sequence Length = 193103 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 120317 ttgcttttggtcttgatgtt 120336
>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence Length = 228955 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ttctttctcttcctttcccc 219 |||||||||||||||||||| Sbjct: 13095 ttctttctcttcctttcccc 13114
>gb|AC147719.1| Gallus gallus BAC clone CH261-22J12 from chromosome unknown, complete sequence Length = 192198 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 cttgttaacatttctggtgt 329 |||||||||||||||||||| Sbjct: 58936 cttgttaacatttctggtgt 58917
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ttgcttttggtcttgatgtt 366 |||||||||||||||||||| Sbjct: 54955 ttgcttttggtcttgatgtt 54974
>gb|M18830.1|DROACT88F D.melanogaster actin gene, complete cds, locus 88F Length = 2150 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 taccttcaccaccaccgccg 26 |||||||||||||||||||| Sbjct: 1280 taccttcaccaccaccgccg 1299
>dbj|AP004282.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1165G2 Length = 250681 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 atgtgaaagcaacttcagac 141 |||||||||||||||||||| Sbjct: 113844 atgtgaaagcaacttcagac 113863 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,218,686 Number of Sequences: 3902068 Number of extensions: 6218686 Number of successful extensions: 141895 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 141024 Number of HSP's gapped (non-prelim): 851 length of query: 622 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 599 effective length of database: 17,143,297,704 effective search space: 10268835324696 effective search space used: 10268835324696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
