ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bah63a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 96 2e-16
2gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A g... 96 2e-16
3gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 96 2e-16
4ref|XM_483560.1| Oryza sativa (japonica cultivar-group), mRNA 80 1e-11
5gb|AY336988.1| Oryza sativa (japonica cultivar-group) disease re... 80 1e-11
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
7dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
8dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
9gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 74 6e-10
10emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 74 6e-10
11emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa... 74 6e-10
12ref|XM_483568.1| Oryza sativa (japonica cultivar-group), mRNA 56 1e-04
13dbj|AB013448.1| Oryza sativa (japonica cultivar-group) gene for ... 56 1e-04
14dbj|AB013449.2| Oryza sativa (japonica cultivar-group) mRNA for ... 56 1e-04
15dbj|AB026839.1| Oryza sativa gene for Pi-b protein, complete cds 56 1e-04
16ref|XM_483564.1| Oryza sativa (japonica cultivar-group), mRNA 54 6e-04
17dbj|AK099855.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
18dbj|AK065693.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
19dbj|AB013451.1| Oryza sativa (japonica cultivar-group) PibH8 mRN... 54 6e-04
20dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
21dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
22emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102... 50 0.009
23dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
24dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.036
25dbj|AK067225.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.036
26dbj|AK119460.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
27dbj|AK100778.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
28emb|AJ718657.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-11-35... 42 2.2
29dbj|AK112513.1| Ciona intestinalis cDNA, clone:cicl017b22, full ... 42 2.2
30emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on ch... 42 2.2
31gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, com... 40 8.7
32ref|XM_883331.1| PREDICTED: Bos taurus similar to xylosylprotein... 40 8.7
33ref|XM_584194.2| PREDICTED: Bos taurus similar to xylosylprotein... 40 8.7
34ref|XM_883329.1| PREDICTED: Bos taurus similar to xylosylprotein... 40 8.7
35ref|XM_883327.1| PREDICTED: Bos taurus similar to xylosylprotein... 40 8.7
36gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 8.7
37gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 8.7
38gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complet... 40 8.7
39gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, com... 40 8.7
40ref|XM_663413.1| Cryptosporidium hominis TU502 stable maintenanc... 40 8.7
41emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 i... 40 8.7
42emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 8.7
43gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, comp... 40 8.7
44dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 8.7
45ref|XM_628360.1| Cryptosporidium parvum Iowa II SMC4'SMC4, (cgd7... 40 8.7
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
47gb|AC126415.9| Mus musculus chromosome 5, clone RP24-476K21, com... 40 8.7
48emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on ch... 40 8.7
49gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 8.7
50emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on ch... 40 8.7 
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
             chromosome condensation factor (CCF), putative resistance
             protein (RGA-2), putative resistance protein (RGA2) and
             putative nodulin-like-like protein (NLL) gene, complete
             cds; and retrotransposons Josephine, Angela-2, Angela-4,
             Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
             Angela-5, Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 130/156 (83%), Gaps = 6/156 (3%)
 Strand = Plus / Minus

                                                                         
Query: 4     cttcatcaccgatgagctggagatgatgcaggcgttcctgatggccgcacacgacgagcc 63
             |||||||||| ||||||| |||||||||||||| || || ||||||||| | |||||   
Sbjct: 30813 cttcatcaccaatgagcttgagatgatgcaggcctttctcatggccgcaaatgacga--- 30757

                                                                         
Query: 64    aggggacaaggacag---ggtggtcagggtatgggtgaagcaggtccgcgacgtggccta 120
             ||| |||   |||||   |||||||||||| ||||||||||| ||||| ||| | |||||
Sbjct: 30756 aggagacggcgacagcaaggtggtcagggtctgggtgaagcaagtccgtgaccttgccta 30697

                                                 
Query: 121   tgaggttgaggactccctccaggaattcgctgtccg 156
              || |||||||||||||||||||| ||||| |||||
Sbjct: 30696 cgatgttgaggactccctccaggatttcgcagtccg 30661



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 69/85 (81%)
 Strand = Plus / Minus

                                                                         
Query: 478   tgatcttggggagacctctgtcataaaaaaggcatacgaagatctgaagatgcacaagaa 537
             |||| ||||||| || || ||||||||||  || |  |||||||||||||  ||||| | 
Sbjct: 30354 tgatgttggggaaacgtccgtcataaaaagagcctttgaagatctgaagaaacacaacag 30295

                                      
Query: 538   gtttgaatgctttgcttggatcaag 562
             |||||| |||  |||||||||||||
Sbjct: 30294 gtttgattgccatgcttggatcaag 30270
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>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds
          Length = 4768

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 130/156 (83%), Gaps = 6/156 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   cttcatcaccgatgagctggagatgatgcaggcgttcctgatggccgcacacgacgagcc 63
           |||||||||| ||||||| |||||||||||||| || || ||||||||| | |||||   
Sbjct: 117 cttcatcaccaatgagcttgagatgatgcaggcctttctcatggccgcaaatgacga--- 173

                                                                       
Query: 64  aggggacaaggacag---ggtggtcagggtatgggtgaagcaggtccgcgacgtggccta 120
           ||| |||   |||||   |||||||||||| ||||||||||| ||||| ||| | |||||
Sbjct: 174 aggagacggcgacagcaaggtggtcagggtctgggtgaagcaagtccgtgaccttgccta 233

                                               
Query: 121 tgaggttgaggactccctccaggaattcgctgtccg 156
            || |||||||||||||||||||| ||||| |||||
Sbjct: 234 cgatgttgaggactccctccaggatttcgcagtccg 269



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 71/88 (80%)
 Strand = Plus / Plus

                                                                       
Query: 478 tgatcttggggagacctctgtcataaaaaaggcatacgaagatctgaagatgcacaagaa 537
           |||| ||||||| || || ||||||||||  || |  |||||||||||||  | ||| | 
Sbjct: 576 tgatgttggggaaacgtccgtcataaaaagagcctttgaagatctgaagaaacncaacag 635

                                       
Query: 538 gtttgaatgctttgcttggatcaagttg 565
           |||||| |||  ||||||||||||||||
Sbjct: 636 gtttgattgccatgcttggatcaagttg 663
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>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 130/156 (83%), Gaps = 6/156 (3%)
 Strand = Plus / Minus

                                                                         
Query: 4     cttcatcaccgatgagctggagatgatgcaggcgttcctgatggccgcacacgacgagcc 63
             |||||||||| ||||||| |||||||||||||| || || ||||||||| | |||||   
Sbjct: 48567 cttcatcaccaatgagcttgagatgatgcaggcctttctcatggccgcaaatgacga--- 48511

                                                                         
Query: 64    aggggacaaggacag---ggtggtcagggtatgggtgaagcaggtccgcgacgtggccta 120
             ||| |||   |||||   |||||||||||| ||||||||||| ||||| ||| | |||||
Sbjct: 48510 aggagacggcgacagcaaggtggtcagggtctgggtgaagcaagtccgtgaccttgccta 48451

                                                 
Query: 121   tgaggttgaggactccctccaggaattcgctgtccg 156
              || |||||||||||||||||||| ||||| |||||
Sbjct: 48450 cgatgttgaggactccctccaggatttcgcagtccg 48415



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 72/88 (81%)
 Strand = Plus / Minus

                                                                         
Query: 478   tgatcttggggagacctctgtcataaaaaaggcatacgaagatctgaagatgcacaagaa 537
             |||| ||||||| || || ||||||||||  || |  |||||||||||||  ||||| | 
Sbjct: 48108 tgatgttggggaaacgtccgtcataaaaagagcctttgaagatctgaagaaacacaacag 48049

                                         
Query: 538   gtttgaatgctttgcttggatcaagttg 565
             |||||| |||  ||||||||||||||||
Sbjct: 48048 gtttgattgccatgcttggatcaagttg 48021
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>ref|XM_483560.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3618

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagccgcaggaacaagcgctaccgcc 281
           |||||| |||||| ||||||||||| |||||||||||||  |||||||| ||||||||||
Sbjct: 338 agatgaaggagctaagagccaaggttgaggatgtcagccagaggaacaaccgctaccgcc 397

               
Query: 282 tcat 285
           ||||
Sbjct: 398 tcat 401



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 96/119 (80%), Gaps = 3/119 (2%)
 Strand = Plus / Plus

                                                                       
Query: 26  atgatgcaggcgttcctgatggccgcacacgacgagccaggggacaaggacagggtggtc 85
           ||||||||||| ||||| ||||||||  |||| ||||   | |||||| ||| ||| |||
Sbjct: 139 atgatgcaggccttcctcatggccgcggacgaggagc---gtgacaagcacaaggttgtc 195

                                                                      
Query: 86  agggtatgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
           | ||  |||||| |||||||||| || || ||||| || || ||||||| |||||||||
Sbjct: 196 aaggcctgggtgcagcaggtccgtgatgtcgcctacgatgtcgaggactgcctccagga 254
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>gb|AY336988.1| Oryza sativa (japonica cultivar-group) disease related protein 1
           mRNA, complete cds
          Length = 3900

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                       
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagccgcaggaacaagcgctaccgcc 281
           |||||| |||||| ||||||||||| |||||||||||||  |||||||| ||||||||||
Sbjct: 449 agatgaaggagctaagagccaaggttgaggatgtcagccagaggaacaaccgctaccgcc 508

               
Query: 282 tcat 285
           ||||
Sbjct: 509 tcat 512



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 96/119 (80%), Gaps = 3/119 (2%)
 Strand = Plus / Plus

                                                                       
Query: 26  atgatgcaggcgttcctgatggccgcacacgacgagccaggggacaaggacagggtggtc 85
           ||||||||||| ||||| ||||||||  |||| ||||   | |||||| ||| ||| |||
Sbjct: 250 atgatgcaggccttcctcatggccgcggacgaggagc---gtgacaagcacaaggttgtc 306

                                                                      
Query: 86  agggtatgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
           | ||  |||||| |||||||||| || || ||||| || || ||||||| |||||||||
Sbjct: 307 aaggcctgggtgcagcaggtccgtgatgtcgcctacgatgtcgaggactgcctccagga 365
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 222      agatgagggagcttagagccaaggtcgaggatgtcagccgcaggaacaagcgctaccgcc 281
                |||||| |||||| ||||||||||| |||||||||||||  |||||||| ||||||||||
Sbjct: 26970550 agatgaaggagctaagagccaaggttgaggatgtcagccagaggaacaaccgctaccgcc 26970491

                    
Query: 282      tcat 285
                ||||
Sbjct: 26970490 tcat 26970487



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                            
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
                ||||||||||||||||| ||||| ||||| || || ||||||| |||||| || | || |
Sbjct: 27009921 tgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgtt 27009980

                        
Query: 152      gtccggtt 159
                ||||||||
Sbjct: 27009981 gtccggtt 27009988



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 222      agatgagggagcttagagccaaggtcgaggatgtcagcc 260
                |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 26982842 agatgaaggagctgagagccaaggttgaggatgtcagcc 26982880



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 96/119 (80%), Gaps = 3/119 (2%)
 Strand = Plus / Minus

                                                                            
Query: 26       atgatgcaggcgttcctgatggccgcacacgacgagccaggggacaaggacagggtggtc 85
                ||||||||||| ||||| ||||||||  |||| ||||   | |||||| ||| ||| |||
Sbjct: 26970749 atgatgcaggccttcctcatggccgcggacgaggagc---gtgacaagcacaaggttgtc 26970693

                                                                           
Query: 86       agggtatgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
                | ||  |||||| |||||||||| || || ||||| || || ||||||| |||||||||
Sbjct: 26970692 aaggcctgggtgcagcaggtccgtgatgtcgcctacgatgtcgaggactgcctccagga 26970634



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                            
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
                ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 26982709 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 26982768

                        
Query: 152      gtccggtt 159
                | ||||||
Sbjct: 26982769 gcccggtt 26982776



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 5        ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
                |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 26982619 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 26982662
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>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                         
Query: 222   agatgagggagcttagagccaaggtcgaggatgtcagccgcaggaacaagcgctaccgcc 281
             |||||| |||||| ||||||||||| |||||||||||||  |||||||| ||||||||||
Sbjct: 71950 agatgaaggagctaagagccaaggttgaggatgtcagccagaggaacaaccgctaccgcc 71891

                 
Query: 282   tcat 285
             ||||
Sbjct: 71890 tcat 71887



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                          
Query: 92     tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
              ||||||||||||||||| ||||| ||||| || || ||||||| |||||| || | || |
Sbjct: 111321 tgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgtt 111380

                      
Query: 152    gtccggtt 159
              ||||||||
Sbjct: 111381 gtccggtt 111388



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 222   agatgagggagcttagagccaaggtcgaggatgtcagcc 260
             |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 84242 agatgaaggagctgagagccaaggttgaggatgtcagcc 84280



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 96/119 (80%), Gaps = 3/119 (2%)
 Strand = Plus / Minus

                                                                         
Query: 26    atgatgcaggcgttcctgatggccgcacacgacgagccaggggacaaggacagggtggtc 85
             ||||||||||| ||||| ||||||||  |||| ||||   | |||||| ||| ||| |||
Sbjct: 72149 atgatgcaggccttcctcatggccgcggacgaggagc---gtgacaagcacaaggttgtc 72093

                                                                        
Query: 86    agggtatgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
             | ||  |||||| |||||||||| || || ||||| || || ||||||| |||||||||
Sbjct: 72092 aaggcctgggtgcagcaggtccgtgatgtcgcctacgatgtcgaggactgcctccagga 72034



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                         
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
             ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 84109 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 84168

                     
Query: 152   gtccggtt 159
             | ||||||
Sbjct: 84169 gcccggtt 84176



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 5     ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
             |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 84019 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 84062
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                     
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
                ||||||||||||||||||||||||||||| || || ||||||| |||||||||
Sbjct: 22919782 tgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccagga 22919730



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 92      tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
               |||||||||||||| |||||| ||||||||||  | ||||||| |||||
Sbjct: 5124444 tgggtgaagcaggtgcgcgacctggcctatgacatcgaggactgcctcc 5124492



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                            
Query: 203      cggcgcctcattggcaagcagatgagggagcttagagccaaggtcgaggatgtcagccgc 262
                ||||||| ||| | ||||||||||| |||||| || | |||||| |||||||| ||||  
Sbjct: 22919665 cggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccag 22919606

                                
Query: 263      aggaacaagcgctacc 278
                ||||||| ||| ||||
Sbjct: 22919605 aggaacatgcgttacc 22919590
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                     
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
                ||||||||||||||||||||||||||||| || || ||||||| |||||||||
Sbjct: 22847973 tgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccagga 22847921



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                                
Query: 92      tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
               |||||||||||||| |||||| ||||||||||  | ||||||| |||||
Sbjct: 5124426 tgggtgaagcaggtgcgcgacctggcctatgacatcgaggactgcctcc 5124474



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                            
Query: 203      cggcgcctcattggcaagcagatgagggagcttagagccaaggtcgaggatgtcagccgc 262
                ||||||| ||| | ||||||||||| |||||| || | |||||| |||||||| ||||  
Sbjct: 22847856 cggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccag 22847797

                                
Query: 263      aggaacaagcgctacc 278
                ||||||| ||| ||||
Sbjct: 22847796 aggaacatgcgttacc 22847781
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 155568

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
             ||||||||||||||||||||||||||||| || || ||||||| |||||||||
Sbjct: 29059 tgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccagga 29007



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 203   cggcgcctcattggcaagcagatgagggagcttagagccaaggtcgaggatgtcagccgc 262
             ||||||| ||| | ||||||||||| |||||| || | |||||| |||||||| ||||  
Sbjct: 28942 cggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccag 28883

                             
Query: 263   aggaacaagcgctacc 278
             ||||||| ||| ||||
Sbjct: 28882 aggaacatgcgttacc 28867
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>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 148705

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccagga 144
             ||||||||||||||||||||||||||||| || || ||||||| |||||||||
Sbjct: 37062 tgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgcctccagga 37114



 Score = 48.1 bits (24), Expect = 0.036
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                         
Query: 203   cggcgcctcattggcaagcagatgagggagcttagagccaaggtcgaggatgtcagccgc 262
             ||||||| ||| | ||||||||||| |||||| || | |||||| |||||||| ||||  
Sbjct: 37179 cggcgccgcatcgccaagcagatgaaggagctgaggggcaaggttgaggatgtgagccag 37238

                             
Query: 263   aggaacaagcgctacc 278
             ||||||| ||| ||||
Sbjct: 37239 aggaacatgcgttacc 37254
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>ref|XM_483568.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4458

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||||||||| ||||| ||||| || || ||||||| |||||| || | || |
Sbjct: 202 tgggtgaagcaggtccgtgacgtcgcctacgacgtcgaggactgcctccaagactacgtt 261

                   
Query: 152 gtccggtt 159
           ||||||||
Sbjct: 262 gtccggtt 269
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>dbj|AB013448.1| Oryza sativa (japonica cultivar-group) gene for Pib, complete cds
          Length = 10322

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 217  caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
            ||||||||||| |||||||||   ||||||||||||||||||||
Sbjct: 3899 caagcagatgaaggagcttaggaacaaggtcgaggatgtcagcc 3942



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 92   tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
            ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| ||||||
Sbjct: 3774 tgggtgaagcaagtccgtgacactgcctatgatgttgaggacagcctccaggatttcgct 3833

              
Query: 152  gt 153
            ||
Sbjct: 3834 gt 3835
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>dbj|AB013449.2| Oryza sativa (japonica cultivar-group) mRNA for Pib, complete cds
          Length = 4288

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 217 caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
           ||||||||||| |||||||||   ||||||||||||||||||||
Sbjct: 633 caagcagatgaaggagcttaggaacaaggtcgaggatgtcagcc 676



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| ||||||
Sbjct: 508 tgggtgaagcaagtccgtgacactgcctatgatgttgaggacagcctccaggatttcgct 567

             
Query: 152 gt 153
           ||
Sbjct: 568 gt 569
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>dbj|AB026839.1| Oryza sativa gene for Pi-b protein, complete cds
          Length = 7295

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                        
Query: 217  caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
            ||||||||||| |||||||||   ||||||||||||||||||||
Sbjct: 1502 caagcagatgaaggagcttaggaacaaggtcgaggatgtcagcc 1545



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                        
Query: 92   tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
            ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| ||||||
Sbjct: 1377 tgggtgaagcaagtccgtgacactgcctatgatgttgaggacagcctccaggatttcgct 1436

              
Query: 152  gt 153
            ||
Sbjct: 1437 gt 1438
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>ref|XM_483564.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4029

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagcc 260
           |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 422 agatgaaggagctgagagccaaggttgaggatgtcagcc 460



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 289 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 348

                   
Query: 152 gtccggtt 159
           | ||||||
Sbjct: 349 gcccggtt 356



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 5   ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
           |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 199 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 242
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>dbj|AK099855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110K12, full
           insert sequence
          Length = 983

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagcc 260
           |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 418 agatgaaggagctgagagccaaggttgaggatgtcagcc 456



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 285 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 344

                   
Query: 152 gtccggtt 159
           | ||||||
Sbjct: 345 gcccggtt 352



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 5   ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
           |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 195 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 238
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>dbj|AK065693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043I01, full
           insert sequence
          Length = 4030

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagcc 260
           |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 423 agatgaaggagctgagagccaaggttgaggatgtcagcc 461



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 290 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 349

                   
Query: 152 gtccggtt 159
           | ||||||
Sbjct: 350 gcccggtt 357



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 5   ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
           |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 200 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 243
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>dbj|AB013451.1| Oryza sativa (japonica cultivar-group) PibH8 mRNA, complete cds
          Length = 4001

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 222 agatgagggagcttagagccaaggtcgaggatgtcagcc 260
           |||||| |||||| ||||||||||| |||||||||||||
Sbjct: 409 agatgaaggagctgagagccaaggttgaggatgtcagcc 447



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| || || ||||||||||| || || || |||| |||||| || | ||||
Sbjct: 276 tgggtgaagcaagtacgtgacgtggcctacgacgtggaagactgcctccaagactacgct 335

                   
Query: 152 gtccggtt 159
           | ||||||
Sbjct: 336 gcccggtt 343



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 5   ttcatcaccgatgagctggagatgatgcaggcgttcctgatggc 48
           |||||||  |||||||| |||||||||||| | |||||| ||||
Sbjct: 186 ttcatcagggatgagcttgagatgatgcagtctttcctgctggc 229
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
                |||||||||||||| |||||| | ||||| || || |||||||||||||
Sbjct: 19872509 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactccctcc 19872461



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
                |||||||||||||| |||||| | ||||| || || ||||||| |||||
Sbjct: 19866717 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactgcctcc 19866669
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>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0034B12
          Length = 124083

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
             |||||||||||||| |||||| | ||||| || || |||||||||||||
Sbjct: 96949 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactccctcc 96901



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
             |||||||||||||| |||||| | ||||| || || ||||||| |||||
Sbjct: 91157 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactgcctcc 91109
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>emb|AL713901.3|CNS07YQ1 Oryza sativa chromosome 12, . BAC OJ1102_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 112231

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                              
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
             |||||||||||||| |||||| ||||||||||  | ||||||| |||||
Sbjct: 95097 tgggtgaagcaggtgcgcgacctggcctatgacatcgaggactgcctcc 95145
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 217      caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
                ||||||||||| |||||| ||   ||||||||||||||||||||
Sbjct: 35134001 caagcagatgaaggagctcaggaacaaggtcgaggatgtcagcc 35133958



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 92       tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
                ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| || |||
Sbjct: 35134126 tgggtgaagcaagtccgtgacactgcctatgacgttgaggacagcctccaggattttgct 35134067

                  
Query: 152      gt 153
                ||
Sbjct: 35134066 gt 35134065
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1202_E07
          Length = 145014

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 217   caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
             ||||||||||| |||||| ||   ||||||||||||||||||||
Sbjct: 29357 caagcagatgaaggagctcaggaacaaggtcgaggatgtcagcc 29314



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 92    tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
             ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| || |||
Sbjct: 29482 tgggtgaagcaagtccgtgacactgcctatgacgttgaggacagcctccaggattttgct 29423

               
Query: 152   gt 153
             ||
Sbjct: 29422 gt 29421
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>dbj|AK067225.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098J11, full
           insert sequence
          Length = 2445

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 217 caagcagatgagggagcttagagccaaggtcgaggatgtcagcc 260
           ||||||||||| |||||| ||   ||||||||||||||||||||
Sbjct: 577 caagcagatgaaggagctcaggaacaaggtcgaggatgtcagcc 620



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctccaggaattcgct 151
           ||||||||||| ||||| |||   |||||||| |||||||||  ||||||||| || |||
Sbjct: 452 tgggtgaagcaagtccgtgacactgcctatgacgttgaggacagcctccaggattttgct 511

             
Query: 152 gt 153
           ||
Sbjct: 512 gt 513
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>dbj|AK119460.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-E09, full
           insert sequence
          Length = 3382

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
           |||||||||||||| |||||| | ||||| || || ||||||| |||||
Sbjct: 226 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactgcctcc 274
to top
>dbj|AK100778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120F15, full
           insert sequence
          Length = 4121

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 92  tgggtgaagcaggtccgcgacgtggcctatgaggttgaggactccctcc 140
           |||||||||||||| |||||| | ||||| || || ||||||| |||||
Sbjct: 222 tgggtgaagcaggtgcgcgacctcgcctacgacgtcgaggactgcctcc 270
to top
>emb|AJ718657.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-11-350, cultivar Bright
           Yellow 2
          Length = 284

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 254 gtcagccgcaggaacaagcgc 274
           |||||||||||||||||||||
Sbjct: 123 gtcagccgcaggaacaagcgc 143
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>dbj|AK112513.1| Ciona intestinalis cDNA, clone:cicl017b22, full insert sequence
          Length = 1843

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 168 agtcatggtggcgcattgctc 188
           |||||||||||||||||||||
Sbjct: 260 agtcatggtggcgcattgctc 280
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>emb|AL672268.18| Mouse DNA sequence from clone RP23-171J18 on chromosome X, complete
              sequence
          Length = 187999

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 533    aagaagtttgaatgctttgcttgga 557
              |||||||| ||||||||||||||||
Sbjct: 176549 aagaagttggaatgctttgcttgga 176525
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>gb|AC123722.8| Mus musculus chromosome 5, clone RP23-424O22, complete sequence
          Length = 205851

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    agatgatgcaggcgttcctgatgg 47
             ||||||||||||| ||||||||||
Sbjct: 20071 agatgatgcaggcattcctgatgg 20048
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>ref|XM_883331.1| PREDICTED: Bos taurus similar to xylosylprotein
           beta1,4-galactosyltransferase, polypeptide 7
           (galactosyltransferase I), transcript variant 6
           (LOC507559), mRNA
          Length = 1495

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  agccaggggacaaggacagg 79
           ||||||||||||||||||||
Sbjct: 276 agccaggggacaaggacagg 295
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>ref|XM_584194.2| PREDICTED: Bos taurus similar to xylosylprotein
           beta1,4-galactosyltransferase, polypeptide 7
           (galactosyltransferase I), transcript variant 1
           (LOC507559), mRNA
          Length = 1603

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  agccaggggacaaggacagg 79
           ||||||||||||||||||||
Sbjct: 276 agccaggggacaaggacagg 295
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>ref|XM_883329.1| PREDICTED: Bos taurus similar to xylosylprotein
           beta1,4-galactosyltransferase, polypeptide 7
           (galactosyltransferase I), transcript variant 4
           (LOC507559), mRNA
          Length = 1406

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  agccaggggacaaggacagg 79
           ||||||||||||||||||||
Sbjct: 276 agccaggggacaaggacagg 295
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>ref|XM_883327.1| PREDICTED: Bos taurus similar to xylosylprotein
           beta1,4-galactosyltransferase, polypeptide 7
           (galactosyltransferase I), transcript variant 2
           (LOC507559), mRNA
          Length = 1723

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 60  agccaggggacaaggacagg 79
           ||||||||||||||||||||
Sbjct: 396 agccaggggacaaggacagg 415
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     attgctcgcacccttctgga 201
               ||||||||||||||||||||
Sbjct: 1855838 attgctcgcacccttctgga 1855857
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 182     attgctcgcacccttctgga 201
               ||||||||||||||||||||
Sbjct: 1907233 attgctcgcacccttctgga 1907252
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>gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complete sequence
          Length = 243483

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 603    ttttgaggcagttttatgta 622
              ||||||||||||||||||||
Sbjct: 118244 ttttgaggcagttttatgta 118263
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>gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, complete sequence
          Length = 189341

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    tggcaagcagatgagggagc 233
              ||||||||||||||||||||
Sbjct: 116419 tggcaagcagatgagggagc 116400
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>ref|XM_663413.1| Cryptosporidium hominis TU502 stable maintenance of chromosomes;
            Smc4p (Chro.70215) partial mRNA
          Length = 3951

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  ctgaagatgcacaagaagtt 540
            ||||||||||||||||||||
Sbjct: 1808 ctgaagatgcacaagaagtt 1827
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>emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 in linkage group 2,
              complete sequence
          Length = 180976

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 604    tttgaggcagttttatgtaa 623
              ||||||||||||||||||||
Sbjct: 143381 tttgaggcagttttatgtaa 143400
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 570   gtcctgtcaatccaacagagtact 593
             ||||||||| ||||||||||||||
Sbjct: 68015 gtcctgtcattccaacagagtact 68038
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>gb|AC011467.7| Homo sapiens chromosome 19 clone CTC-457E21, complete sequence
          Length = 187888

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 294    atggctctggttccaagcct 313
              ||||||||||||||||||||
Sbjct: 145553 atggctctggttccaagcct 145572
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 31      gcaggcgttcctgatggccgcaca 54
               ||||||||||| ||||||||||||
Sbjct: 1918757 gcaggcgttccagatggccgcaca 1918734
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>ref|XM_628360.1| Cryptosporidium parvum Iowa II SMC4'SMC4, (cgd7_1850), partial mRNA
          Length = 4101

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 521  ctgaagatgcacaagaagtt 540
            ||||||||||||||||||||
Sbjct: 1958 ctgaagatgcacaagaagtt 1977
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 570      gtcctgtcaatccaacagagtact 593
                ||||||||| ||||||||||||||
Sbjct: 29931263 gtcctgtcattccaacagagtact 29931286
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>gb|AC126415.9| Mus musculus chromosome 5, clone RP24-476K21, complete sequence
          Length = 168525

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 24     agatgatgcaggcgttcctgatgg 47
              ||||||||||||| ||||||||||
Sbjct: 127186 agatgatgcaggcattcctgatgg 127163
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>emb|AL713977.13| Mouse DNA sequence from clone RP23-303A21 on chromosome X, complete
             sequence
          Length = 159014

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    agccaggggacaaggacagg 79
             ||||||||||||||||||||
Sbjct: 85515 agccaggggacaaggacagg 85534
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 31      gcaggcgttcctgatggccgcaca 54
               ||||||||||| ||||||||||||
Sbjct: 1940782 gcaggcgttccagatggccgcaca 1940759
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>emb|AL805972.11| Mouse DNA sequence from clone RP23-211P15 on chromosome 4, complete
            sequence
          Length = 223059

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 334  tgagttcccaattgctggcg 353
            ||||||||||||||||||||
Sbjct: 5393 tgagttcccaattgctggcg 5412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,603,723
Number of Sequences: 3902068
Number of extensions: 4603723
Number of successful extensions: 88690
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88266
Number of HSP's gapped (non-prelim): 424
length of query: 635
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 612
effective length of database: 17,143,297,704
effective search space: 10491698194848
effective search space used: 10491698194848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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