Clone Information

BLAST Search Result

Clone Name	bah62k24
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1....	66	3e-11
2	GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1....	58	6e-09
3	GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1....	58	6e-09
4	YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)	56	3e-08
5	3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase...	55	5e-08
6	Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1....	54	1e-07
7	3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase...	52	4e-07
8	YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3...	52	4e-07
9	MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1...	52	4e-07
10	Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1....	52	4e-07
11	3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitocho...	48	6e-06
12	YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)	48	7e-06
13	3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochond...	48	7e-06
14	MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase ...	47	1e-05
15	MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase ...	47	1e-05
16	3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase...	47	1e-05
17	3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitocho...	44	8e-05
18	Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (E...	43	2e-04
19	YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)	37	0.010
20	PITX1_RAT (Q99NA7) Pituitary homeobox 1	32	0.55
21	PITX1_MOUSE (P70314) Pituitary homeobox 1 (Homeobox protein P-OT...	32	0.55
22	PITX1_HUMAN (P78337) Pituitary homeobox 1 (Hindlimb expressed ho...	32	0.55
23	RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigment...	31	0.72
24	PANX1_HUMAN (Q96RD7) Pannexin-1	31	0.94
25	HBL1_CAEEL (Q9XYD3) Hunchback-like protein	30	1.2
26	CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein...	30	1.2
27	PITX1_CHICK (P56673) Pituitary homeobox 1 (cPTX1)	30	1.6
28	EGL10_CAEEL (P49809) Regulator of G-protein signaling egl-10 (Eg...	30	2.1
29	JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation...	29	2.7
30	PITX1_XENLA (Q9W751) Pituitary homeobox 1 (X-PITX-1) (xPitx1)	29	3.6
31	PANX1_MOUSE (Q9JIP4) Pannexin-1	28	4.7
32	VILD_DICDI (Q8WQ85) Villidin	28	4.7
33	TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit T...	28	6.1
34	PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (...	28	6.1
35	PTF3E_RHOCA (P23387) PTS system fructose-specific EIIBBC compone...	28	6.1
36	ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3...	28	6.1
37	Y1685_PASMU (Q9CKD7) Hypothetical protein PM1685	28	8.0
38	LPPB_HAEIN (P44833) Outer membrane antigenic lipoprotein B precu...	28	8.0
39	ZN292_HUMAN (O60281) Zinc finger protein 292	28	8.0
40	PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (...	28	8.0
41	PANX1_PONPY (Q5REE3) Pannexin-1	28	8.0
42	MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe...	28	8.0

>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 292

 Score = 65.9 bits (159), Expect = 3e-11
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = +3

Query: 6   GGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKL 185
           GG +++APVSG +  A +G L I+  GD+A+++ + P F++LGK    +G  G+G   K+
Sbjct: 111 GGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKV 170

Query: 186 VVNMIMGSMMNAFSEGLCLADKSGLSP 266
              +I+   + A SE L  A K+G  P
Sbjct: 171 ANQIIVALNIEAVSEALLFASKAGADP 197

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>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 294

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 32/88 (36%), Positives = 47/88 (53%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           KG   ++APVSG +  A DG L ++  GDKA++D        +       GE+G G   K
Sbjct: 111 KGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTK 170

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGLSP 266
           L   +I+   + A SE L LA K+G++P
Sbjct: 171 LANQVIVALNIAAMSEALTLATKAGVNP 198

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>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)|
           (Tartronate semialdehyde reductase) (TSAR)
          Length = 294

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 32/88 (36%), Positives = 47/88 (53%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           KG   ++APVSG +  A DG L ++  GDKA++D        +       GE+G G   K
Sbjct: 111 KGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTK 170

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGLSP 266
           L   +I+   + A SE L LA K+G++P
Sbjct: 171 LANQVIVALNIAAMSEALTLATKAGVNP 198

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>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)|
          Length = 288

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = +3

Query: 18  VEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNM 197
           ++APVSG    A++G L I+  G+K  ++  +P F ++G+   + G  G+G   K+   +
Sbjct: 118 LDAPVSGGDIGAQNGTLAIMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQI 177

Query: 198 IMGSMMNAFSEGLCLADKSGLSPQ 269
            + + M   +E +  A KSGL P+
Sbjct: 178 AIAAGMIGVAEAMAYAQKSGLEPE 201

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>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 324

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 31/86 (36%), Positives = 43/86 (50%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           KG  F++APVSG    AE   L  +  G +A Y+ +    + +GKK    G  G G   K
Sbjct: 137 KGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAK 196

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGL 260
           L  NM++   M   SE + LA + GL
Sbjct: 197 LCNNMMLAISMIGVSEAMNLAVRQGL 222

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>Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.-.-)|
          Length = 301

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
 Frame = +3

Query: 6   GGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLG-EMGNGAKMK 182
           G   ++APVSG    A  G++ ++A+G K  ++ + P  D    K + +G E+G GA +K
Sbjct: 118 GLIMLDAPVSGGAAKALKGEMTVMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVK 177

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGL 260
           +V  ++ G  + A +E + LA K+G+
Sbjct: 178 IVHQLLAGVHIAAGAEAMALASKAGI 203

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>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 347

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 29/85 (34%), Positives = 40/85 (47%)
 Frame = +3

Query: 18  VEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNM 197
           ++APVSG    AE G L  +  G +  Y    P    +G+ S + G  GNG+  K+  N+
Sbjct: 165 LDAPVSGGVLAAEAGTLTFMVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNL 224

Query: 198 IMGSMMNAFSEGLCLADKSGLSPQT 272
            M   M   SE L L    G+S  T
Sbjct: 225 AMAVSMLGTSEALALGQSLGISAST 249

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>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region|
           (Fragment)
          Length = 194

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 28/83 (33%), Positives = 45/83 (54%)
 Frame = +3

Query: 12  AFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVV 191
           AF++APVSG +  AE+G L ++  GD+A +D + P           LG +G G   K+V 
Sbjct: 20  AFLDAPVSGGQAGAENGALTVMMGGDQAHFDTVKPVISAYSCAE-LLGPVGAGQLTKMVN 78

Query: 192 NMIMGSMMNAFSEGLCLADKSGL 260
            + +  ++   +EGL  A  +GL
Sbjct: 79  QICIAGVVQGLAEGLHFAKSAGL 101

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>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)|
          Length = 298

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 29/88 (32%), Positives = 43/88 (48%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           KG   ++APVSG    A  G L  +  G    +    P  + +G+  F  G+ G G   K
Sbjct: 112 KGLTLLDAPVSGGVGGARAGTLSFIVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAK 171

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGLSP 266
           +  NM++G +M   +E L L  K+GL P
Sbjct: 172 ICNNMLLGILMAGTAEALALGVKNGLDP 199

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>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)|
          Length = 290

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 26/89 (29%), Positives = 51/89 (57%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           +G  F++APV+G    A +G L I+  GD + +++ +P    +G+K    G  G+G  +K
Sbjct: 116 QGLRFLDAPVTGGDVGAINGTLTIMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVK 175

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGLSPQ 269
           L   ++ G    A +E + L+++ G++P+
Sbjct: 176 LCNQVLCGIHAIAAAEAIQLSEQLGIAPE 204

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>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 335

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 25/88 (28%), Positives = 41/88 (46%)
 Frame = +3

Query: 6   GGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKL 185
           G  F++APVSG    A  G L  +  G +  +       + +G    + G +G G   K+
Sbjct: 150 GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKI 209

Query: 186 VVNMIMGSMMNAFSEGLCLADKSGLSPQ 269
             NM++   M   +E + L  +SGL P+
Sbjct: 210 CNNMLLAISMIGTAEAMNLGIRSGLDPK 237

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>YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)|
          Length = 302

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +3

Query: 18  VEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLG-EMGNGAKMKLVVN 194
           ++APVSG    A +G++ ++A+G    ++ + P  + +  K + +G E G G+ +K++  
Sbjct: 123 LDAPVSGGAVKAANGEMTVMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQ 182

Query: 195 MIMGSMMNAFSEGLCLADKSGL 260
           ++ G  + A +E + LA ++G+
Sbjct: 183 LLAGVHIAAGAEAMALAARAGI 204

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>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 335

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 25/88 (28%), Positives = 41/88 (46%)
 Frame = +3

Query: 6   GGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKL 185
           G  F++APVSG    A  G L  +  G +  +         +G    + G +G+G   K+
Sbjct: 150 GAVFMDAPVSGGVGAARSGNLTFMVGGVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKI 209

Query: 186 VVNMIMGSMMNAFSEGLCLADKSGLSPQ 269
             NM++   M   +E + L  +SGL P+
Sbjct: 210 CNNMLLAISMIGTAEAMNLGIRSGLDPK 237

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>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)|
           (HIBADH)
          Length = 294

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 27/85 (31%), Positives = 40/85 (47%)
 Frame = +3

Query: 18  VEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNM 197
           ++APVSG  K A    L  +  GD++      P  + +  K    G  G G   K+  NM
Sbjct: 114 LDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNM 173

Query: 198 IMGSMMNAFSEGLCLADKSGLSPQT 272
           ++     A +E   LA+K GLS Q+
Sbjct: 174 VLAVQQIAIAEAFVLAEKLGLSAQS 198

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>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)|
           (HIBADH)
          Length = 294

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 27/85 (31%), Positives = 40/85 (47%)
 Frame = +3

Query: 18  VEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNM 197
           ++APVSG  K A    L  +  GD++      P  + +  K    G  G G   K+  NM
Sbjct: 114 LDAPVSGGVKGAAAATLAFMVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNM 173

Query: 198 IMGSMMNAFSEGLCLADKSGLSPQT 272
           ++     A +E   LA+K GLS Q+
Sbjct: 174 VLAVQQIAIAEAFVLAEKLGLSAQS 198

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>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           (EC 1.1.1.31) (HIBADH)
          Length = 299

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
 Frame = +3

Query: 15  FVEAPVSGSKKPAEDGQLVILA-AGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVV 191
           +++AP+SG    A+   L  +  AG+ A +        ++GK    LG +GNG   K+  
Sbjct: 116 YIDAPISGGVTGAQQATLTFMVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICN 175

Query: 192 NMIMGSMMNAFSEGLCLADKSGL 260
           NM++G  M A +E + L    GL
Sbjct: 176 NMLLGIQMVAVAETMNLGISMGL 198

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>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial|
           precursor (EC 1.1.1.31) (HIBADH)
          Length = 336

 Score = 44.3 bits (103), Expect = 8e-05
 Identities = 24/88 (27%), Positives = 39/88 (44%)
 Frame = +3

Query: 6   GGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKL 185
           G  F++APVSG    A  G L  +  G +  +         +G    + G +G G   K+
Sbjct: 151 GAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKI 210

Query: 186 VVNMIMGSMMNAFSEGLCLADKSGLSPQ 269
             NM++   M   +E + L  + GL P+
Sbjct: 211 CNNMLLAISMIGTAEAMNLGIRLGLDPK 238

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>Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (EC 1.1.-.-)|
          Length = 295

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 27/86 (31%), Positives = 38/86 (44%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           +G   V+APVSG    A  G+L ++   D   +  +   F          GE G G +MK
Sbjct: 117 QGIHIVDAPVSGGAAAAAKGELAVMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMK 176

Query: 183 LVVNMIMGSMMNAFSEGLCLADKSGL 260
           L  NM+      A +E   LA+  GL
Sbjct: 177 LARNMLTFVSYAAAAEAQRLAEACGL 202

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>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)|
          Length = 298

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   KGGAFVEAPVSGSKKPAEDGQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMK 182
           KG + ++ P+  +   A  G L++LA G     +   P    +G +    G  G G ++K
Sbjct: 112 KGFSMMDVPIGRTSDNAITGTLLLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVK 171

Query: 183 LVVNMIMGSMMNAFS-EGLCLADKSGLS 263
           L +N  M   +NA S E   L +  GLS
Sbjct: 172 L-INNYMSIALNALSAEAAVLCEALGLS 198

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>PITX1_RAT (Q99NA7) Pituitary homeobox 1|
          Length = 315

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -3

Query: 172 APFPISPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSAG 47
           AP P+S +   FF SMS   + S +SA S  + MT  PSS G
Sbjct: 191 APAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMT-MPSSMG 231

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>PITX1_MOUSE (P70314) Pituitary homeobox 1 (Homeobox protein P-OTX) (Pituitary|
           OTX-related factor) (Hindlimb expressed homeobox protein
           backfoot) (Ptx1)
          Length = 315

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -3

Query: 172 APFPISPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSAG 47
           AP P+S +   FF SMS   + S +SA S  + MT  PSS G
Sbjct: 191 APAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMT-MPSSMG 231

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>PITX1_HUMAN (P78337) Pituitary homeobox 1 (Hindlimb expressed homeobox protein|
           backfoot)
          Length = 314

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 19/42 (45%), Positives = 24/42 (57%)
 Frame = -3

Query: 172 APFPISPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSAG 47
           AP P+S +   FF SMS   + S +SA S  + MT  PSS G
Sbjct: 190 APAPLSTKSFTFFNSMSPLSSQSMFSAPSSISSMT-MPSSMG 230

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>RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1|
           protein homolog)
          Length = 2105

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
 Frame = -2

Query: 266 GAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLL------PKYVKCRDHV 105
           G   T      S+G S   T  D + H+F  C ++ LP+ E+ +       K +K + HV
Sbjct: 620 GTDKTISKTPASVGNSTVTTRIDQLIHEFSHCGLTKLPENEKQISSSVASKKKMKSQQHV 679

Query: 104 I 102
           I
Sbjct: 680 I 680

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>PANX1_HUMAN (Q96RD7) Pannexin-1|
          Length = 426

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 239 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 81
           TE+LG+S+   S  H  +      +        L+ KY+ CR   +I  L+AC
Sbjct: 176 TENLGQSLWEVSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLAC 228

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>HBL1_CAEEL (Q9XYD3) Hunchback-like protein|
          Length = 982

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -3

Query: 244  AKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPS-MSNAGTMSSYSALSPAA 77
            A  SPS+   +  P   L +S I AP PI+P+ N+F  S ++ A  +    A  P+A
Sbjct: 874  APHSPSDTTSV--PSPPLHSSSIVAPIPITPQPNEFLQSILAQASLLGPLLANRPSA 928

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>CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein capD|
          Length = 599

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 91  RHYMMTWSLHLTYLGRSRSFW 153
           R Y +TW +HL  +G SR FW
Sbjct: 106 RLYFITWMMHLLLIGGSRLFW 126

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>PITX1_CHICK (P56673) Pituitary homeobox 1 (cPTX1)|
          Length = 311

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 23/73 (31%), Positives = 31/73 (42%)
 Frame = -3

Query: 265 GLNPLLSAKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPSMSNAGTMSSYSALS 86
           G  P  S    P +  +   P     T  +  P P+S +   FF SMS   + S +SA S
Sbjct: 158 GYVPQFSGLMQPYDDMYAGYPYNNWATKSL-TPAPLSTKSFTFFNSMSPLSSQSMFSAPS 216

Query: 85  PAARMTNWPSSAG 47
             + M N PS  G
Sbjct: 217 SISSM-NMPSGMG 228

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>EGL10_CAEEL (P49809) Regulator of G-protein signaling egl-10 (Egg-laying|
           defective protein 10)
          Length = 555

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 157 SPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSA 50
           SPRKND  PS S+ G   S S+ +     T+ PS++
Sbjct: 266 SPRKNDQEPSTSSGGESPSTSSAAAGTATTSAPSTS 301

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>JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 1418

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/68 (32%), Positives = 28/68 (41%)
 Frame = -3

Query: 208 LPMIMLTTSFIFAPFPISPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSAGFLLPET 29
           L  I L TS  FAP    P   D  P+M    + S  S   PA R  +  S +    P+T
Sbjct: 90  LATIALATSPTFAPLSYRPPSQDPTPAMPLFPSQSIESTERPAKRPRSEKSPSPLHQPQT 149

Query: 28  GASTKAPP 5
             +  A P
Sbjct: 150 TVAPDANP 157

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>PITX1_XENLA (Q9W751) Pituitary homeobox 1 (X-PITX-1) (xPitx1)|
          Length = 305

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -3

Query: 265 GLNPLLSAKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPSMSNAGTMSSYSALS 86
           G  P  S    P ++ +   P     T  +  P P+S +   FF SMS   + S +S  S
Sbjct: 148 GYVPQFSGLMQPYDEMYAGYPYNNWATKSL-TPAPLSTKSFTFFNSMSPLSSQSMFSGPS 206

Query: 85  PAARMTNWPSSAG 47
             + M + PSS G
Sbjct: 207 SISSM-SMPSSMG 218

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>PANX1_MOUSE (Q9JIP4) Pannexin-1|
          Length = 426

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 239 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 81
           TE++G+S+   S  H  +      +        L+ KY+ CR    +  L+AC
Sbjct: 175 TENVGQSLWEISESHFKYPIVEQYLKTKKNSSHLIMKYISCRLVTFVVILLAC 227

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>VILD_DICDI (Q8WQ85) Villidin|
          Length = 1704

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/51 (33%), Positives = 20/51 (39%)
 Frame = -3

Query: 157 SPRKNDFFPSMSNAGTMSSYSALSPAARMTNWPSSAGFLLPETGASTKAPP 5
           S   N   P  S       +S LS     T+  SS GF  P   +ST  PP
Sbjct: 621 SESPNSTTPKSSTPTQTRHHSVLSRNPSYTSLKSSGGFSKPSPSSSTSTPP 671

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>TI50C_DROME (Q9W4V8) Import inner membrane translocase subunit TIM50-C,|
           mitochondrial precursor
          Length = 428

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 254 TFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERL 138
           T + Q  +LG   HH  H H  HQ HL  + H  Q  RL
Sbjct: 24  THIHQHRALGNHYHHY-HQHYQHQHHL--LHHQQQYLRL 59

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>PARD3_HUMAN (Q8TEW0) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (CTCL tumor antigen se2-5) (PAR3-alpha)
          Length = 1356

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = -3

Query: 199 IMLTTSFIFAPFPISPRKND--FFPSMSNAGTMSSYSALSPAARM-TNWPSSAGFLLPET 29
           I +T S + A  P+  R++       +S + + S++S+  P+ +  T W ++AGFL   T
Sbjct: 125 IEVTPSVLRANMPLHVRRSSDPALIGLSTSVSDSNFSSEEPSRKNPTRWSTTAGFLKQNT 184

Query: 28  GASTK 14
             S K
Sbjct: 185 AGSPK 189

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>PTF3E_RHOCA (P23387) PTS system fructose-specific EIIBBC component (EIIBBC-Fru)|
           [Includes: Fructose-specific phosphotransferase enzyme
           IIB component (EC 2.7.1.69) (PTS system
           fructose-specific EIIB component) (EIII-Fru); Fructose
           permease IIC component (
          Length = 578

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +3

Query: 111 VPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSP 266
           + AF++ G     L  +G GA  KL+V ++ G +  A+S    +AD+ GL+P
Sbjct: 271 IKAFEVEGTLPAALMAIGGGAAFKLMVPVLAGFI--AYS----IADRPGLTP 316

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>ENG1_YEAST (P53753) Endo-1,3(4)-beta-glucanase 1 precursor (EC 3.2.1.6)|
           (Endo-1,4-beta-glucanase 1) (Endo-1,3-beta-glucanase 1)
           (Laminarinase-1) (Daughter specific expression protein
           4)
          Length = 1117

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 25/86 (29%), Positives = 42/86 (48%)
 Frame = -3

Query: 262 LNPLLSAKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPSMSNAGTMSSYSALSP 83
           ++PL++   S S +   I+P  + +   I+    IS R N      + A    S+ A +P
Sbjct: 198 IDPLVTQMPSYSSQETKIIPSSLTSNKTIYT---ISVRTN-----AATATGEDSFIASTP 249

Query: 82  AARMTNWPSSAGFLLPETGASTKAPP 5
           A+    +PS++   L +T AST A P
Sbjct: 250 ASSTLFYPSNSTQDLVQTLASTTASP 275

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>Y1685_PASMU (Q9CKD7) Hypothetical protein PM1685|
          Length = 233

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = -2

Query: 242 QTESLGESIHHTS-HDHVDHQFHLCSISHLPQKERLLPKY 126
           Q  S G  +HH   +   +H  HL  I  LP+ + + P+Y
Sbjct: 93  QIMSAGSGVHHAEINPSSEHDVHLYQIWILPKSKGIAPRY 132

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>LPPB_HAEIN (P44833) Outer membrane antigenic lipoprotein B precursor|
          Length = 405

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
 Frame = -3

Query: 226 EKAFIILPMIMLTTSFIFA--PFPISPRKNDFFPSMSNAGTMSSY-SALSPAARMTNWPS 56
           +K+F++LP+ ++  S   +  P PIS    +F PS+  +   S+   A  P  +  + P+
Sbjct: 2   KKSFLLLPLSLVVLSACTSNFPAPISDADGNFSPSVIQSVNGSNVGGAWQPEIQKNSLPT 61

Query: 55  SAGFLLPE 32
           +   + P+
Sbjct: 62  TGNMVTPQ 69

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>ZN292_HUMAN (O60281) Zinc finger protein 292|
          Length = 1969

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -3

Query: 211 ILPMIMLTTSFIFAPFPISPRKNDFFPSMSNAGTMSSYSAL 89
           +LP+ + + S  F P P        FPS +++GT S +S L
Sbjct: 496 VLPLNIDSGSDPFLPLPAESSSMSLFPSPADSGTNSVFSQL 536

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>PARD3_MOUSE (Q99NH2) Partitioning-defective 3 homolog (PARD-3) (PAR-3)|
           (Atypical PKC isotype-specific-interacting protein)
           (ASIP) (Ephrin-interacting protein) (PHIP)
          Length = 1333

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
 Frame = -3

Query: 199 IMLTTSFIFAPFPISPRKND--FFPSMSNAGTMSSYSALSPAARM-TNWPSSAGFLLPET 29
           I +T S + A  P+  R++       +S + + +++S+  P+ +  T W ++AGFL   T
Sbjct: 125 IEVTPSVLRANMPLHVRRSSDPALTGLSTSVSDNNFSSEEPSRKNPTRWSTTAGFLKQNT 184

Query: 28  GASTK 14
             S K
Sbjct: 185 AGSPK 189

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>PANX1_PONPY (Q5REE3) Pannexin-1|
          Length = 426

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -2

Query: 239 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 81
           TE+L +S+   S  H  +      +        L+ KY+ CR   +I  L+AC
Sbjct: 176 TENLRQSLWEVSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLAC 228

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>MURG_NEIMA (Q9JSZ7) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 355

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 60  GQLVILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVV 191
           G  VI      ++ + +VP +DIL +     G  GNG K KL++
Sbjct: 31  GHHVIWLGSKDSMEERIVPQYDILLETLAIKGVRGNGIKRKLML 74


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,718,980
Number of Sequences: 219361
Number of extensions: 941493
Number of successful extensions: 2957
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2954
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result