Clone Name | bah62k24 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_466265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1187 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 442 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 501 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 502 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 561 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 562 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 621 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 622 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 681 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 682 agtggtttgagcccccagac 701
>ref|XM_507487.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA Length = 1235 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 445 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 504 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 505 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 564 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 565 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 624 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 625 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 684 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 685 agtggtttgagcccccagac 704
>ref|XM_506829.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1712_E04.5 mRNA Length = 1267 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 474 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 533 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 534 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 593 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 594 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 653 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 654 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 713 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 714 agtggtttgagcccccagac 733
>gb|AY224558.1| Oryza sativa (japonica cultivar-group) isolate 29037 gamma hydroxybutyrate dehydrogenase-like protein mRNA, complete cds Length = 882 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 340 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 399 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 400 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 459 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 460 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 519 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 520 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 579 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 580 agtggtttgagcccccagac 599
>dbj|AB110167.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 12FPR024 Length = 1163 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 423 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 482 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 483 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 542 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 543 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 602 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 603 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 662 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 663 agtggtttgagcccccagac 682
>dbj|AK109435.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-H04, full insert sequence Length = 1220 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 471 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 530 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 531 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 590 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 591 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 650 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 651 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 710 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 711 agtggtttgagcccccagac 730
>dbj|AK104168.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-E09, full insert sequence Length = 1187 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 442 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 501 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 502 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 561 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 562 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 621 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 622 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 681 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 682 agtggtttgagcccccagac 701
>dbj|AK071800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114G06, full insert sequence Length = 1235 Score = 357 bits (180), Expect = 1e-95 Identities = 240/260 (92%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 445 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 504 Query: 72 attcttgctgcaggcgacaaggcactatatgatgacatggtccctgcatttgacatactt 131 |||||||||||||| ||||||| | | |||||||| ||||||||||||||||| ||||| Sbjct: 505 attcttgctgcaggggacaaggtattgtatgatgatatggtccctgcatttgatgtactt 564 Query: 132 gggaagaagtcgttctttctgggggagatgggaaatggagcaaagatgaaactggtggtc 191 ||||| |||||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct: 565 gggaaaaagtcgttctttttgggagagattggaaatggagcaaagatgaaactggtggtc 624 Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgtttggctgacaaa 251 |||||||||||||||||||||||||||||||| || |||||||||| | ||||||| || Sbjct: 625 aacatgatcatgggaagtatgatgaatgctttgtctgagggactctctctggctgataac 684 Query: 252 agtgggttgagcccccagac 271 ||||| |||||||||||||| Sbjct: 685 agtggtttgagcccccagac 704
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 4e-37 Identities = 103/110 (93%) Strand = Plus / Plus Query: 99 tatgatgacatggtccctgcatttgacatacttgggaagaagtcgttctttctgggggag 158 |||||||| ||||||||||||||||| |||||||||| |||||||||||| |||| ||| Sbjct: 21366907 tatgatgatatggtccctgcatttgatgtacttgggaaaaagtcgttctttttgggagag 21366966 Query: 159 atgggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaag 208 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21366967 attggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaag 21367016 Score = 139 bits (70), Expect = 5e-30 Identities = 79/82 (96%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 21366254 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 21366313 Query: 72 attcttgctgcaggcgacaagg 93 |||||||||||||| ||||||| Sbjct: 21366314 attcttgctgcaggggacaagg 21366335 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 207 agtatgatgaatgctttctccgagggactctgtttggctgacaaaagtgggttgagcccc 266 ||||||||||||||||| || |||||||||| | ||||||| || ||||| ||||||||| Sbjct: 21367178 agtatgatgaatgctttgtctgagggactctctctggctgataacagtggtttgagcccc 21367237 Query: 267 cagac 271 ||||| Sbjct: 21367238 cagac 21367242
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 163 bits (82), Expect = 4e-37 Identities = 103/110 (93%) Strand = Plus / Plus Query: 99 tatgatgacatggtccctgcatttgacatacttgggaagaagtcgttctttctgggggag 158 |||||||| ||||||||||||||||| |||||||||| |||||||||||| |||| ||| Sbjct: 26860 tatgatgatatggtccctgcatttgatgtacttgggaaaaagtcgttctttttgggagag 26919 Query: 159 atgggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaag 208 || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26920 attggaaatggagcaaagatgaaactggtggtcaacatgatcatgggaag 26969 Score = 139 bits (70), Expect = 5e-30 Identities = 79/82 (96%) Strand = Plus / Plus Query: 12 gcttttgttgaagctccagtttcagggagcaagaagccagctgaagatggccaattggtc 71 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 26207 gcttttgttgaagctccagtttcaggaagcaaaaagccagctgaagatggccaattggtc 26266 Query: 72 attcttgctgcaggcgacaagg 93 |||||||||||||| ||||||| Sbjct: 26267 attcttgctgcaggggacaagg 26288 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 207 agtatgatgaatgctttctccgagggactctgtttggctgacaaaagtgggttgagcccc 266 ||||||||||||||||| || |||||||||| | ||||||| || ||||| ||||||||| Sbjct: 27131 agtatgatgaatgctttgtctgagggactctctctggctgataacagtggtttgagcccc 27190 Query: 267 cagac 271 ||||| Sbjct: 27191 cagac 27195
>gb|BT012834.1| Lycopersicon esculentum clone 113891R, mRNA sequence Length = 1105 Score = 77.8 bits (39), Expect = 2e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 19 ttgaagctccagtttcagggagcaagaagccagctgaagatgg 61 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 380 ttgaagctccagtttcagggagcaaaaagccagctgaagatgg 422 Score = 56.0 bits (28), Expect = 6e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 165 aatggagcaaagatgaaactggtggtcaacatgatcatgggaagtatgatgaatgc 220 ||||||||||| |||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 526 aatggagcaaaaatgaaacttgttgttaatatgataatgggcagtatgatgaatgc 581
>ref|NM_001035688.1| Arabidopsis thaliana 3-hydroxyisobutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) AT3G25530 transcript variant AT3G25530.2 mRNA, complete cds Length = 1065 Score = 65.9 bits (33), Expect = 6e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||||| ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 395 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaactcattatccttgct 454 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 455 gctggtgacaaggcact 471 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 566 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 624 Query: 251 aagtgg 256 ||||| Sbjct: 625 gagtgg 630
>ref|NM_113449.2| Arabidopsis thaliana 3-hydroxyisobutyrate dehydrogenase/ phosphogluconate dehydrogenase (decarboxylating) AT3G25530 transcript variant AT3G25530.1 mRNA, complete cds Length = 1099 Score = 65.9 bits (33), Expect = 6e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||||| ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 429 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaactcattatccttgct 488 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 489 gctggtgacaaggcact 505 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 600 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 658 Query: 251 aagtgg 256 ||||| Sbjct: 659 gagtgg 664
>gb|AY044183.1| Arabidopsis thaliana gamma hydroxybutyrate dehydrogenase mRNA, complete cds Length = 1032 Score = 65.9 bits (33), Expect = 6e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||||| ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 349 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaactcattatccttgct 408 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 409 gctggtgacaaggcact 425 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 520 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 578 Query: 251 aagtgg 256 ||||| Sbjct: 579 gagtgg 584
>gb|BT025039.1| Arabidopsis thaliana At3g25530 mRNA, complete cds Length = 870 Score = 65.9 bits (33), Expect = 6e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||||| ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 349 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaactcattatccttgct 408 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 409 gctggtgacaaggcact 425 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 520 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 578 Query: 251 aagtgg 256 ||||| Sbjct: 579 gagtgg 584
>gb|AY049298.1| Arabidopsis thaliana AT3g25530/MWL2_15 mRNA, complete cds Length = 1081 Score = 65.9 bits (33), Expect = 6e-08 Identities = 66/77 (85%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||||| ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 428 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaactcattatccttgct 487 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 488 gctggtgacaaggcact 504 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 599 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 657 Query: 251 aagtgg 256 ||||| Sbjct: 658 gagtgg 663
>ref|NM_101628.3| Arabidopsis thaliana phosphogluconate dehydrogenase (decarboxylating) AT1G17650 mRNA, complete cds Length = 1242 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 atgaaactggtggtcaacatgatcatgggaagtatgatg 215 |||||||| || ||||||||||||||||||||||||||| Sbjct: 751 atgaaacttgtcgtcaacatgatcatgggaagtatgatg 789
>gb|BT008734.1| Arabidopsis thaliana At1g17650 gene, complete cds Length = 1032 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 atgaaactggtggtcaacatgatcatgggaagtatgatg 215 |||||||| || ||||||||||||||||||||||||||| Sbjct: 658 atgaaacttgtcgtcaacatgatcatgggaagtatgatg 696
>gb|AY093135.1| Arabidopsis thaliana unknown protein (At1g17650) mRNA, complete cds Length = 1164 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 atgaaactggtggtcaacatgatcatgggaagtatgatg 215 |||||||| || ||||||||||||||||||||||||||| Sbjct: 674 atgaaacttgtcgtcaacatgatcatgggaagtatgatg 712
>gb|AY085690.1| Arabidopsis thaliana clone 17110 mRNA, complete sequence Length = 1156 Score = 61.9 bits (31), Expect = 1e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 177 atgaaactggtggtcaacatgatcatgggaagtatgatg 215 |||||||| || ||||||||||||||||||||||||||| Sbjct: 689 atgaaacttgtcgtcaacatgatcatgggaagtatgatg 727
>emb|BX825117.1|CNS0A67I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL11ZB03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1065 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaattggtcattcttgct 80 |||| ||| |||||| | ||||| ||||||||||||||||||||| | | || |||||| Sbjct: 407 gaaggtccggtttcatgtagcaaaaagccagctgaagatggccaactcattatccttgct 466 Query: 81 gcaggcgacaaggcact 97 || || ||||||||||| Sbjct: 467 gctggtgacaaggcact 483 Score = 52.0 bits (26), Expect = 0.001 Identities = 58/66 (87%), Gaps = 2/66 (3%) Strand = Plus / Plus Query: 192 aacatgatcatgggaagtatgatgaatgctttctccgagggactctgt-ttggctgacaa 250 |||||||| |||||||| ||||||||||| ||||| ||||| || ||| ||||||||||| Sbjct: 578 aacatgataatgggaagcatgatgaatgcattctctgaggggct-tgtattggctgacaa 636 Query: 251 aagtgg 256 ||||| Sbjct: 637 gagtgg 642
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 21 gaagctccagtttcagggagcaagaagccagctgaagatggccaa 65 |||| ||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 59630 gaaggtccggtttcaggtagcaaaaagccagctgaagatggccaa 59586
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 176 gatgaaactggtggtcaacatgatcatggg 205 |||||| ||||||||||||||||||||||| Sbjct: 1500996 gatgaagctggtggtcaacatgatcatggg 1500967
>gb|AC034257.3|AC034257 Arabidopsis thaliana chromosome I BAC F11A6 genomic sequence, complete sequence Length = 98950 Score = 48.1 bits (24), Expect = 0.015 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 atgaaactggtggtcaacatgatcatgggaag 208 |||||||| || |||||||||||||||||||| Sbjct: 49977 atgaaacttgtcgtcaacatgatcatgggaag 49946
>gb|AC022492.5|AC022492 Genomic sequence for Arabidopsis thaliana BAC F1L3 from chromosome I, complete sequence Length = 127968 Score = 48.1 bits (24), Expect = 0.015 Identities = 30/32 (93%) Strand = Plus / Minus Query: 177 atgaaactggtggtcaacatgatcatgggaag 208 |||||||| || |||||||||||||||||||| Sbjct: 123966 atgaaacttgtcgtcaacatgatcatgggaag 123935
>ref|XM_776747.1| PREDICTED: Strongylocentrotus purpuratus similar to cytokine-like nuclear factor n-pac (LOC576439), mRNA Length = 453 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Plus Query: 176 gatgaaactggtggtcaacatgatcat 202 ||||||||||||| ||||||||||||| Sbjct: 96 gatgaaactggtgatcaacatgatcat 122
>dbj|AB070263.1| Bombyx mandarina mitochondrial DNA, complete genome Length = 15928 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 3752 tgttgaagctccagtttcaggg 3731
>gb|AF182332.1|AF182332 Drosophila nasuta NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182331.1|AF182331 Drosophila kohkoa NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182330.1|AF182330 Drosophila kepulauana NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182328.1|AF182328 Drosophila sulfurigaster neonasuta NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182324.1|AF182324 Drosophila albomicans strain GZ NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182323.1|AF182323 Drosophila albomicans strain CHM NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182322.1|AF182322 Drosophila albomicans strain HK NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AF182321.1|AF182321 Drosophila albomicans strain KM NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; mitochondrial genes for mitochondrial products Length = 1629 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 17 tgttgaagctccagtttcaggg 38 |||||||||||||||||||||| Sbjct: 914 tgttgaagctccagtttcaggg 935
>gb|AC145967.3| Pan troglodytes BAC clone RP43-17M21 from 7, complete sequence Length = 179148 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 33261 tgggaaatggagcaaagatga 33281
>gb|AC147100.2| Pan troglodytes BAC clone RP43-45I10 from 7, complete sequence Length = 150235 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 143869 tgggaaatggagcaaagatga 143849
>gb|AC146375.3| Pan troglodytes BAC clone RP43-75I2 from 7, complete sequence Length = 205242 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 191483 tgggaaatggagcaaagatga 191463
>gb|AC113506.12| Mus musculus chromosome 9, clone RP23-373O2, complete sequence Length = 171170 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 agatgggaaatggagcaaaga 177 ||||||||||||||||||||| Sbjct: 162967 agatgggaaatggagcaaaga 162947
>gb|AC102627.8| Mus musculus chromosome 14, clone RP23-466M3, complete sequence Length = 193228 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 ttgacatacttgggaagaagt 141 ||||||||||||||||||||| Sbjct: 162455 ttgacatacttgggaagaagt 162435
>gb|AC002385.1| Homo sapiens BAC clone CTA-222A16 from 7, complete sequence Length = 201990 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 138638 tgggaaatggagcaaagatga 138618
>gb|AC146114.3| Pan troglodytes BAC clone RP43-22O2 from 7, complete sequence Length = 176328 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 128967 tgggaaatggagcaaagatga 128987
>gb|AC090132.3| Homo sapiens chromosome 8, clone RP11-813B8, complete sequence Length = 205004 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 15922 tgggaaatggagcaaagatga 15942
>gb|AC022821.9| Homo sapiens chromosome 8, clone RP11-51M18, complete sequence Length = 171721 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 144301 tgggaaatggagcaaagatga 144321
>gb|AC148296.3| Pan troglodytes BAC clone CH251-545I16 from chromosome 7, complete sequence Length = 187553 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 133929 tgggaaatggagcaaagatga 133909
>gb|AC148918.3| Medicago truncatula chromosome 2 BAC clone mth2-44o11, complete sequence Length = 126437 Score = 42.1 bits (21), Expect = 0.90 Identities = 39/45 (86%) Strand = Plus / Minus Query: 24 gctccagtttcagggagcaagaagccagctgaagatggccaattg 68 |||||||||||||| ||| |||||||| |||||||| |||||| Sbjct: 80105 gctccagtttcaggttccaaaaagccagcagaagatggacaattg 80061
>gb|AC160964.1| Mus musculus BAC clone RP24-316G24 from chromosome 9, complete sequence Length = 158842 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 157 agatgggaaatggagcaaaga 177 ||||||||||||||||||||| Sbjct: 124444 agatgggaaatggagcaaaga 124464
>dbj|AK086389.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930025A16 product:unclassifiable, full insert sequence Length = 2558 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 agatgggaaatggagcaaaga 177 ||||||||||||||||||||| Sbjct: 1538 agatgggaaatggagcaaaga 1518
>gb|AC093393.3| Homo sapiens BAC clone RP11-816B18 from 2, complete sequence Length = 120450 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgggaaatggagcaaagatga 180 ||||||||||||||||||||| Sbjct: 58625 tgggaaatggagcaaagatga 58605
>gb|AC163102.5| Mus musculus chromosome 18, clone RP23-270E10, complete sequence Length = 179127 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 ttctgggggagatgggaaatggag 171 ||||||||||||||||| |||||| Sbjct: 5037 ttctgggggagatgggagatggag 5060
>gb|AY207005.1| Homo sapiens ferritin-like protein mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 449 caagaagccagctgaagatg 468
>ref|XM_529238.1| PREDICTED: Pan troglodytes similar to ferritin light polypeptide variant (LOC473864), mRNA Length = 462 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>ref|XM_514491.1| PREDICTED: Pan troglodytes similar to hypothetical protein (LOC458071), mRNA Length = 947 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 504 caagaagccagctgaagatg 523
>gb|BC021670.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:22710 IMAGE:4051089), complete cds Length = 900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 448 caagaagccagctgaagatg 467
>gb|BC013928.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:24228 IMAGE:3839120), complete cds Length = 901 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 449 caagaagccagctgaagatg 468
>gb|BC016354.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:24480 IMAGE:4092360), complete cds Length = 900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 449 caagaagccagctgaagatg 468
>gb|BC016715.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:24401 IMAGE:4067055), complete cds Length = 903 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 449 caagaagccagctgaagatg 468
>gb|BC016346.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:24392 IMAGE:4066010), complete cds Length = 904 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 449 caagaagccagctgaagatg 468
>gb|BC008439.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:14642 IMAGE:4093482), complete cds Length = 900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>gb|BC004245.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:10465 IMAGE:3615360), complete cds Length = 878 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 434 caagaagccagctgaagatg 453
>gb|AY466472.1| Homo sapiens ferritin light polypeptide variant (FTL) mRNA, complete cds Length = 576 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>ref|NM_000146.3| Homo sapiens ferritin, light polypeptide (FTL), mRNA Length = 889 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>gb|BC058820.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:61835 IMAGE:4049525), complete cds Length = 892 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 438 caagaagccagctgaagatg 457
>gb|AC163720.2| Mus musculus BAC clone RP23-424C5 from chromosome 16, complete sequence Length = 206284 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 acttgggaagaagtcgttct 147 |||||||||||||||||||| Sbjct: 6780 acttgggaagaagtcgttct 6799
>gb|BC013989.1| Homo sapiens cDNA clone IMAGE:3641578, **** WARNING: chimeric clone **** Length = 4793 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 4348 caagaagccagctgaagatg 4367
>gb|BC005109.1| Homo sapiens mRNA similar to RNA-binding protein S1, serine-rich domain (cDNA clone IMAGE:3958219) Length = 2629 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 468 caagaagccagctgaagatg 449
>gb|AC005913.2| Homo sapiens Xp22-175-176 BAC GSHB-484O17 (Genome Systems Human BAC Library) complete sequence Length = 147124 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 97264 caagaagccagctgaagatg 97283
>emb|CR861037.1| Pongo pygmaeus mRNA; cDNA DKFZp470G1212 (from clone DKFZp470G1212) Length = 955 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>emb|CR456715.1| Homo sapiens full open reading frame cDNA clone RZPDo834G103D for gene FTL, ferritin, light polypeptide; complete cds, incl. stopcodon Length = 528 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>emb|BX571748.1|HSM806624 Homo sapiens mRNA; cDNA DKFZp686L19147 (from clone DKFZp686L19147); complete cds Length = 1000 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 444 caagaagccagctgaagatg 463
>gb|BT008070.1| Synthetic construct Homo sapiens ferritin, light polypeptide mRNA, partial cds Length = 528 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>emb|CR610876.1| full-length cDNA clone CS0DH006YH19 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 666 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 240 caagaagccagctgaagatg 259
>dbj|AK092744.1| Homo sapiens cDNA FLJ35425 fis, clone SMINT2001615, highly similar to FERRITIN LIGHT CHAIN Length = 1818 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 1393 caagaagccagctgaagatg 1412
>emb|CR608406.1| full-length cDNA clone CS0DJ009YD19 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 447 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 21 caagaagccagctgaagatg 40
>emb|CR596451.1| full-length cDNA clone CS0DI017YK07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 858 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 434 caagaagccagctgaagatg 453
>gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence Length = 164239 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tgacatacttgggaagaagtcgtt 145 |||||||||||||||||| ||||| Sbjct: 104670 tgacatacttgggaagaaatcgtt 104647
>gb|DQ295230.1| Naegleria gruberi translation elongation factor 2 (EF-2) mRNA, complete cds Length = 2602 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aagaagccagctgaagatgg 61 |||||||||||||||||||| Sbjct: 275 aagaagccagctgaagatgg 294
>ref|NG_002715.1| Homo sapiens ferritin, light polypeptide-like 1 (FTLL1) pseudogene on chromosome 20 Length = 1178 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 546 caagaagccagctgaagatg 565
>gb|AF116671.1|AF116671 Homo sapiens PRO1853 mRNA, complete cds Length = 1495 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 1478 caagaagccagctgaagatg 1459
>gb|AC007098.4| Homo sapiens BAC clone RP11-443F16 from 2, complete sequence Length = 157650 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 actggtggtcaacatgatca 201 |||||||||||||||||||| Sbjct: 139312 actggtggtcaacatgatca 139293
>gb|AY892153.1| Synthetic construct Homo sapiens clone FLH023842.01L ferritin light polypeptide (FTL) mRNA, partial cds Length = 528 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>gb|AY892152.1| Synthetic construct Homo sapiens clone FLH023841.01L ferritin light polypeptide (FTL) mRNA, partial cds Length = 528 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 246 caagaagccagctgaagatg 265
>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete sequence Length = 197404 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctgtttggctgacaaaagtg 255 |||||||||||||||||||| Sbjct: 37058 ctgtttggctgacaaaagtg 37039
>dbj|AK026534.1| Homo sapiens cDNA: FLJ22881 fis, clone KAT03571, highly similar to HUMFERL Human ferritin L chain mRNA Length = 967 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>dbj|AK131053.1| Homo sapiens cDNA FLJ29019 fis, clone MPG08836, highly similar to Ferritin light chain Length = 884 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 459 caagaagccagctgaagatg 478
>dbj|AK131050.1| Homo sapiens cDNA FLJ29016 fis, clone MPG02306, highly similar to Ferritin light chain Length = 870 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>dbj|AK131048.1| Homo sapiens cDNA FLJ29014 fis, clone LNF06154, highly similar to Ferritin light chain Length = 870 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>dbj|AK130205.1| Homo sapiens cDNA FLJ26695 fis, clone MPG09301, highly similar to Ferritin light chain Length = 865 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 440 caagaagccagctgaagatg 459
>dbj|AK130191.1| Homo sapiens cDNA FLJ26681 fis, clone MPG04585, highly similar to Ferritin light chain Length = 870 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>gb|BC062708.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:71996 IMAGE:4774403), complete cds Length = 905 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 448 caagaagccagctgaagatg 467
>emb|CR792438.14| Zebrafish DNA sequence from clone DKEY-20J1 in linkage group 3, complete sequence Length = 135329 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ctgggggagatgggaaatgg 169 |||||||||||||||||||| Sbjct: 59547 ctgggggagatgggaaatgg 59528
>gb|BC018990.2| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:20176 IMAGE:3503710), complete cds Length = 881 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 417 caagaagccagctgaagatg 436
>gb|BC002991.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone MGC:3729 IMAGE:2905327), complete cds Length = 861 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 413 caagaagccagctgaagatg 432
>gb|AF147331.1|AF147331 Homo sapiens full length insert cDNA clone YB24D08 Length = 491 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 56 caagaagccagctgaagatg 75
>gb|AC111031.8| Mus musculus chromosome 18, clone RP23-447L21, complete sequence Length = 177570 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 148 ttctgggggagatgggaaatggag 171 ||||||||||||||||| |||||| Sbjct: 121937 ttctgggggagatgggagatggag 121960
>dbj|AP006212.1| Homo sapiens genomic DNA, chromosome 20, clone:CTB-271B20, complete sequence Length = 129610 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 14855 caagaagccagctgaagatg 14874
>emb|AL031670.6|HS681N20 Human DNA sequence from clone RP4-681N20 on chromosome 20p12.1-13 Contains the 3' end of the PANK2 gene the Pantothenate kinase 2 (Hallervorden-Spatz syndrome), RNF24 gene for ring finger protein 24, a FTL (ferritin light polypeptide) pseudogene and two CpG Islands, complete sequence Length = 130263 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 23706 caagaagccagctgaagatg 23687
>gb|BC008441.1| Homo sapiens ferritin, light polypeptide, mRNA (cDNA clone IMAGE:4099066) Length = 900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 445 caagaagccagctgaagatg 464
>emb|CT009704.12| Mouse DNA sequence from clone RP23-115B21 on chromosome 16, complete sequence Length = 226520 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 acttgggaagaagtcgttct 147 |||||||||||||||||||| Sbjct: 115375 acttgggaagaagtcgttct 115394
>emb|CT025635.2| Pan troglodytes chromosome X clone RP43-046H06 map Xq28, complete sequence Length = 167178 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 62917 caagaagccagctgaagatg 62898
>gb|M12938.1|HUMFERLA Human ferritin light subunit mRNA, partial cds Length = 576 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 150 caagaagccagctgaagatg 169
>gb|M11147.1|HUMFERL Human ferritin L chain mRNA, complete cds Length = 822 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 397 caagaagccagctgaagatg 416
>gb|AC116547.2| Homo sapiens chromosome 8 clone RP11-314C19 map 8q24.2, complete sequence Length = 166683 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 tgacatacttgggaagaagtcgtt 145 |||||||||||||||||| ||||| Sbjct: 126092 tgacatacttgggaagaaatcgtt 126069
>gb|M10119.1|HUMFERLS Human ferritin light subunit mRNA, complete cds Length = 723 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 caagaagccagctgaagatg 60 |||||||||||||||||||| Sbjct: 325 caagaagccagctgaagatg 344 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,625,560 Number of Sequences: 3902068 Number of extensions: 2625560 Number of successful extensions: 48891 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 48727 Number of HSP's gapped (non-prelim): 164 length of query: 273 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 251 effective length of database: 17,147,199,772 effective search space: 4303947142772 effective search space used: 4303947142772 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)