ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62k22 |
|---|---|
| Clone Library Name | barley_pub |
>ALAT_YEAST (P52892) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 507 Score = 56.2 bits (134), Expect = 2e-08 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 9/63 (14%) Frame = +1 Query: 40 EELNXNVKKVQYAVRGELYLRASELQKEGKR---------IIFTNVGNPHALGQKPLTFP 192 ++LN V K +YAVRG + RA EL++E K+ II N+GNP L QKPLTF Sbjct: 29 KDLNTGVTKAEYAVRGAIPTRADELKEELKKNPEVLPFDDIINANIGNPQQLDQKPLTFT 88 Query: 193 RQV 201 RQV Sbjct: 89 RQV 91
>ALAM_YEAST (P52893) Putative alanine aminotransferase, mitochondrial precursor| (EC 2.6.1.2) (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 592 Score = 55.5 bits (132), Expect = 4e-08 Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 9/73 (12%) Frame = +1 Query: 10 EMMGRKALDYEELNXNVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPH 162 E + L E++N NV K +YAVRG + +RA EL+ + + RII N+GNP Sbjct: 104 EFYPAEQLTLEDVNENVLKAKYAVRGAIPMRAEELKAQLEKDPQSLPFDRIINANIGNPQ 163 Query: 163 ALGQKPLTFPRQV 201 L QKPLT+ RQV Sbjct: 164 QLQQKPLTYYRQV 176
>ALA2_HORVU (P52894) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 53.9 bits (128), Expect = 1e-07 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 9/63 (14%) Frame = +1 Query: 40 EELNXNVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTFP 192 + LN V K +YAVRGE+ + A LQ++ K I++ N+GNP +LGQ+P+TF Sbjct: 8 DNLNPKVLKCEYAVRGEIVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67 Query: 193 RQV 201 R+V Sbjct: 68 REV 70
>ALA2_PANMI (P34106) Alanine aminotransferase 2 (EC 2.6.1.2) (GPT)| (Glutamic--pyruvic transaminase 2) (Glutamic--alanine transaminase 2) (ALAAT-2) Length = 482 Score = 53.5 bits (127), Expect = 1e-07 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 9/63 (14%) Frame = +1 Query: 40 EELNXNVKKVQYAVRGELYLRASELQKEGK---------RIIFTNVGNPHALGQKPLTFP 192 E LN V K +YAVRGE+ + A LQ++ + I++ N+GNP +LGQ+P+TF Sbjct: 8 ENLNPKVLKCEYAVRGEIVIHAQHLQQQLQTQPGSLPFDEILYCNIGNPQSLGQQPVTFF 67 Query: 193 RQV 201 R+V Sbjct: 68 REV 70
>ALAT_HUMAN (P24298) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 52.4 bits (124), Expect = 3e-07 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 8/67 (11%) Frame = +1 Query: 25 KALDYEELNXNVKKVQYAVRGELYLRASELQKEGKR--------IIFTNVGNPHALGQKP 180 K L + +N V++V+YAVRG + RA EL++E ++ +I N+G+ A+GQ+P Sbjct: 18 KVLTLDGMNPRVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGDAQAMGQRP 77 Query: 181 LTFPRQV 201 +TF RQV Sbjct: 78 ITFLRQV 84
>ALAT_SCHPO (Q10334) Putative alanine aminotransferase (EC 2.6.1.2)| (Glutamic--pyruvic transaminase) (GPT) (Glutamic--alanine transaminase) Length = 505 Score = 52.0 bits (123), Expect = 4e-07 Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 9/65 (13%) Frame = +1 Query: 34 DYEELNXNVKKVQYAVRGELYLRASELQKE---------GKRIIFTNVGNPHALGQKPLT 186 D LN V K YAVRG L + A E+Q + I++ N+GNP +GQ P+T Sbjct: 29 DLNSLNQQVFKANYAVRGALAILADEIQDDLLENPSSYPFSEIVYANIGNPQQMGQSPIT 88 Query: 187 FPRQV 201 F RQV Sbjct: 89 FVRQV 93
>ALAT_RAT (P25409) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 51.2 bits (121), Expect = 7e-07 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 8/67 (11%) Frame = +1 Query: 25 KALDYEELNXNVKKVQYAVRGELYLRASELQKEGKR--------IIFTNVGNPHALGQKP 180 K L + +N V++V+YAVRG + RA EL++E ++ +I N+G+ A+GQ+P Sbjct: 18 KVLTLDTMNPCVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGDAQAMGQRP 77 Query: 181 LTFPRQV 201 +TF RQV Sbjct: 78 ITFFRQV 84
>ALAT_MOUSE (Q8QZR5) Alanine aminotransferase (EC 2.6.1.2) (Glutamic--pyruvic| transaminase) (GPT) (Glutamic--alanine transaminase) Length = 495 Score = 51.2 bits (121), Expect = 7e-07 Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 8/67 (11%) Frame = +1 Query: 25 KALDYEELNXNVKKVQYAVRGELYLRASELQKEGKR--------IIFTNVGNPHALGQKP 180 K L + +N V++V+YAVRG + RA EL++E ++ +I N+G+ A+GQ+P Sbjct: 18 KVLTLDTMNPCVRRVEYAVRGPIVQRALELEQELRQGVKKPFTEVIRANIGDAQAMGQRP 77 Query: 181 LTFPRQV 201 +TF RQV Sbjct: 78 ITFFRQV 84
>AAT_MYCTU (P63498) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 36.2 bits (82), Expect = 0.024 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 49 NXNVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 + ++ V Y +RG ++ A+ L+ EG RI+ N+GNP G Sbjct: 31 SAKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFG 71
>AAT_MYCBO (P63499) Probable aspartate aminotransferase (EC 2.6.1.1)| (Transaminase A) (ASPAT) Length = 429 Score = 36.2 bits (82), Expect = 0.024 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 49 NXNVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 + ++ V Y +RG ++ A+ L+ EG RI+ N+GNP G Sbjct: 31 SAKLQDVLYEIRGPVHQHAARLEAEGHRILKLNIGNPAPFG 71
>YFBQ_SHIFL (P0A961) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.054 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 43 ELNXNVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>YFBQ_ECOLI (P0A959) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.054 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 43 ELNXNVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>YFBQ_ECOL6 (P0A960) Probable aminotransferase yfbQ (EC 2.6.1.-)| Length = 405 Score = 35.0 bits (79), Expect = 0.054 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = +1 Query: 43 ELNXNVKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 E + ++ V Y +RG + A L++EG +++ N+GNP G Sbjct: 5 EKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFG 47
>Y286_HAEIN (P71348) Probable aminotransferase HI0286 (EC 2.6.1.-)| Length = 404 Score = 33.9 bits (76), Expect = 0.12 Identities = 14/38 (36%), Positives = 24/38 (63%) Frame = +1 Query: 58 VKKVQYAVRGELYLRASELQKEGKRIIFTNVGNPHALG 171 ++ V Y +RG ++ A L++EG +I+ N+GNP G Sbjct: 10 LEHVCYDIRGPVHKEALRLEEEGNKILKLNIGNPAPFG 47
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 28.1 bits (61), Expect = 6.6 Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Frame = +1 Query: 22 RKALDYEELNXNVKKVQYAVRGELYLR--ASELQKEGKRIIFTNVGNPHALGQK 177 RK L E N KK V EL ASELQ +GKR++ V N G K Sbjct: 304 RKVLQAEPDNDLAKKTLSEVERELKNSEPASELQTKGKRMVIEEVENSGDEGGK 357 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.137 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,313,150 Number of Sequences: 219361 Number of extensions: 304719 Number of successful extensions: 874 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 856 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 865 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
