>gb|BT018834.1| Zea mays clone EL01N0552D02.d mRNA sequence
          Length = 2172

 Score =  121 bits (61), Expect = 4e-25
 Identities = 89/99 (89%)
 Strand = Plus / Plus

                                                                       
Query: 5   gagtccgaccacaagtncaaatctggagattcagntaagctctgggtgaataaagttgga 64
           |||||||||||||||| |||| ||| |||  ||| |||||| ||||||||||||||||| 
Sbjct: 203 gagtccgaccacaagtacaaaactgaagagccagttaagctttgggtgaataaagttggc 262

                                                  
Query: 65  ccttacaataatcctcaagaaacttacaactatcacagc 103
           ||||||||||||||||||||||| ||||||||| |||||
Sbjct: 263 ccttacaataatcctcaagaaacctacaactattacagc 301

>dbj|AK069143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004K23, full
           insert sequence
          Length = 2132

 Score =  105 bits (53), Expect = 2e-20
 Identities = 87/99 (87%)
 Strand = Plus / Plus

                                                                       
Query: 5   gagtccgaccacaagtncaaatctggagattcagntaagctctgggtgaataaagttgga 64
           ||||| |||||||||| ||||  || |||  ||| ||||||||||||||| ||||| || 
Sbjct: 165 gagtcagaccacaagtacaaagttgaagaaccagttaagctctgggtgaacaaagtcggc 224

                                                  
Query: 65  ccttacaataatcctcaagaaacttacaactatcacagc 103
           |||||||||||||| ||||||||||||||||||||||||
Sbjct: 225 ccttacaataatccacaagaaacttacaactatcacagc 263

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 36      cagntaagctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaact 95
               ||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 3855913 cagttaagctctgggtgaacaaagtcggcccttacaataatccacaagaaacttacaact 3855972

                       
Query: 96      atcacagc 103
               ||||||||
Sbjct: 3855973 atcacagc 3855980

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                           
Query: 36      cagntaagctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaact 95
               ||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 3855887 cagttaagctctgggtgaacaaagtcggcccttacaataatccacaagaaacttacaact 3855946

                       
Query: 96      atcacagc 103
               ||||||||
Sbjct: 3855947 atcacagc 3855954

>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152090

 Score = 97.6 bits (49), Expect = 6e-18
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                         
Query: 36    cagntaagctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaact 95
             ||| ||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 17889 cagttaagctctgggtgaacaaagtcggcccttacaataatccacaagaaacttacaact 17948

                     
Query: 96    atcacagc 103
             ||||||||
Sbjct: 17949 atcacagc 17956

>dbj|AK100605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G12, full
           insert sequence
          Length = 2461

 Score = 73.8 bits (37), Expect = 8e-11
 Identities = 83/99 (83%)
 Strand = Plus / Plus

                                                                       
Query: 5   gagtccgaccacaagtncaaatctggagattcagntaagctctgggtgaataaagttgga 64
           |||||||||||||||| |||| ||| |||  | | ||| |||||||| || || ||||| 
Sbjct: 223 gagtccgaccacaagtacaaagctgaagaaacggttaaactctgggtaaacaaggttggc 282

                                                  
Query: 65  ccttacaataatcctcaagaaacttacaactatcacagc 103
           || |||||||| || |||||||||||||||||| |||||
Sbjct: 283 ccgtacaataacccgcaagaaacttacaactattacagc 321

>gb|AC153000.5| Medicago truncatula clone mth2-94c2, complete sequence
          Length = 97390

 Score = 63.9 bits (32), Expect = 8e-08
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                    
Query: 47   tgggtgaataaagttggaccttacaataatcctcaagaaacttacaactatcacag 102
            |||||||| ||||||||||| || || |||||||||||||||||||| ||| ||||
Sbjct: 7528 tgggtgaacaaagttggaccctataacaatcctcaagaaacttacaattattacag 7583

>gb|AC135794.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0084H09, complete sequence
          Length = 130151

 Score = 56.0 bits (28), Expect = 2e-05
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 44    ctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaactatcacagc 103
             |||||||| || || ||||| || |||||||| || |||||||||||||||||| |||||
Sbjct: 31295 ctctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactattacagc 31354

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 2e-05
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                           
Query: 44      ctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaactatcacagc 103
               |||||||| || || ||||| || |||||||| || |||||||||||||||||| |||||
Sbjct: 4059633 ctctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactattacagc 4059692

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 2e-05
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                           
Query: 44      ctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaactatcacagc 103
               |||||||| || || ||||| || |||||||| || |||||||||||||||||| |||||
Sbjct: 4068327 ctctgggtaaacaaggttggcccgtacaataacccgcaagaaacttacaactattacagc 4068386

>gb|AY815082.1| Schistosoma japonicum SJCHGC06257 protein mRNA, complete cds
          Length = 2576

 Score = 48.1 bits (24), Expect = 0.005
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 44  ctctgggtgaataaagttggaccttacaataatcctcaagaaacttac 91
           |||||| ||||||  |||||||| ||| |||||| |||||||||||||
Sbjct: 336 ctctggatgaatactgttggaccataccataatcgtcaagaaacttac 383

>ref|XM_466169.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2240

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 43  gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
           |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 217 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 270

>ref|XM_506821.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1004_H01.22
           mRNA
          Length = 2266

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 43  gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
           |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 243 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 296

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 43       gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
                |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 20831521 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 20831574

>dbj|AP004038.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_H01
          Length = 121377

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 43    gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
             |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 73982 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 74035

>dbj|AK099161.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068L16, full
           insert sequence
          Length = 2240

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 43  gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
           |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 217 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 270

>dbj|AK067736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117E08, full
           insert sequence
          Length = 2265

 Score = 44.1 bits (22), Expect = 0.074
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 43  gctctgggtgaataaagttggaccttacaataatcctcaagaaacttacaacta 96
           |||||||||||| || ||||| || ||||| || || || ||||||||||||||
Sbjct: 242 gctctgggtgaacaaggttggcccgtacaacaacccacaggaaacttacaacta 295

>gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete sequence
          Length = 136954

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 47    tgggtgaataaagttggaccttacaataatcctcaagaaac 87
             ||||| || ||||| || || ||||||||||||||||||||
Sbjct: 61849 tgggtcaacaaagtaggtccgtacaataatcctcaagaaac 61889

>gb|AC036101.6| Homo sapiens chromosome 10 clone RP11-71J2, complete sequence
          Length = 175492

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     cctcaagaaacttacaactat 97
              |||||||||||||||||||||
Sbjct: 174931 cctcaagaaacttacaactat 174951

>gb|AC069077.7| Homo sapiens chromosome 10 clone RP11-418N10, complete sequence
          Length = 160384

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 77   cctcaagaaacttacaactat 97
            |||||||||||||||||||||
Sbjct: 1439 cctcaagaaacttacaactat 1459

>gb|AC012070.8| Homo sapiens BAC clone RP11-318K6 from 2, complete sequence
          Length = 149776

 Score = 42.1 bits (21), Expect = 0.29
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 77    cctcaagaaacttacaactat 97
             |||||||||||||||||||||
Sbjct: 23980 cctcaagaaacttacaactat 24000

>gb|AC107783.10| Mus musculus chromosome 1, clone RP23-38G5, complete sequence
          Length = 178062

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aaacttacaactatcacagc 103
             ||||||||||||||||||||
Sbjct: 51807 aaacttacaactatcacagc 51788

>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     cctcaagaaacttacaacta 96
              ||||||||||||||||||||
Sbjct: 326785 cctcaagaaacttacaacta 326766

>emb|AL627203.7| Human DNA sequence from clone RP11-446M5 on chromosome 1 Contains part
             of the COL11A1 gene for collagen type XI alpha 1, complete
             sequence
          Length = 68335

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    aatcctcaagaaacttacaa 93
             ||||||||||||||||||||
Sbjct: 66099 aatcctcaagaaacttacaa 66118

>dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B749F18,
             LL56-APP region, complete sequence
          Length = 81450

 Score = 40.1 bits (20), Expect = 1.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cctcaagaaacttacaacta 96
             ||||||||||||||||||||
Sbjct: 63086 cctcaagaaacttacaacta 63067

>gb|AC154033.1| Solanum demissum chromosome 5 clone PGEC132D05 map MAP_LOC, complete
             sequence
          Length = 118497

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    tcaagaaacttacaactat 97
             |||||||||||||||||||
Sbjct: 78389 tcaagaaacttacaactat 78407

>gb|AC005864.1| Homo sapiens 12q24.2 PAC RPCI4-765H13 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 39351

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 42    agctctgggtgaataaagttgga 64
             |||||||||| ||||||||||||
Sbjct: 22596 agctctgggtaaataaagttgga 22574

>gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complete sequence
          Length = 139166

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 76    tcctcaagaaacttacaac 94
             |||||||||||||||||||
Sbjct: 54997 tcctcaagaaacttacaac 55015

>gb|AF269880.1|AF269880 Staphylococcus epidermidis strain SR1 clone step.1028b09 genomic
           sequence
          Length = 3356

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 72  ataatcctcaagaaactta 90
           |||||||||||||||||||
Sbjct: 649 ataatcctcaagaaactta 631

>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     ataatcctcaagaaactta 90
              |||||||||||||||||||
Sbjct: 398846 ataatcctcaagaaactta 398828

>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 67      ttacaataatcctcaagaa 85
               |||||||||||||||||||
Sbjct: 1071265 ttacaataatcctcaagaa 1071247

>emb|AL356596.3|CNS05TDF Human chromosome 14 DNA sequence BAC R-354G16 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 179318

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 52   gaataaagttggaccttac 70
            |||||||||||||||||||
Sbjct: 1110 gaataaagttggaccttac 1128

>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 72     ataatcctcaagaaactta 90
              |||||||||||||||||||
Sbjct: 505728 ataatcctcaagaaactta 505710

>emb|AL121821.7|CNS01DSN Human chromosome 14 DNA sequence BAC C-2298J14 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 127539

 Score = 38.2 bits (19), Expect = 4.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 52   gaataaagttggaccttac 70
            |||||||||||||||||||
Sbjct: 8013 gaataaagttggaccttac 7995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 607,057
Number of Sequences: 3902068
Number of extensions: 607057
Number of successful extensions: 54222
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54101
Number of HSP's gapped (non-prelim): 121
length of query: 103
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 82
effective length of database: 17,151,101,840
effective search space: 1406390350880
effective search space used: 1406390350880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)