ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62k16 |
|---|---|
| Clone Library Name | barley_pub |
>RELA_STAAW (P0A0E9) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAAU (P0A0F0) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAAS (Q6G8T5) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAAR (Q6GG70) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAAN (Q99TL8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAAM (Q931Q4) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 736 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/58 (46%), Positives = 38/58 (65%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL +E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 13 PYSADEVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 70
>RELA_STAES (Q8CS97) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 729 Score = 53.5 bits (127), Expect = 5e-07 Identities = 27/58 (46%), Positives = 37/58 (63%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 6 PYSADEVLYKAKSYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 63
>RELA_STAEQ (Q5HNR8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 729 Score = 53.5 bits (127), Expect = 5e-07 Identities = 27/58 (46%), Positives = 37/58 (63%) Frame = +1 Query: 301 PETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 P + E L A SYL E +V + +AYEAH GQ R++G P+I+HP++VA IL E Sbjct: 6 PYSADEVLYKAKSYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTE 63
>RELA_BACSU (O54408) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 734 Score = 50.8 bits (120), Expect = 3e-06 Identities = 25/46 (54%), Positives = 31/46 (67%) Frame = +1 Query: 331 AISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARIL 468 A SYL E + FV A A +AH Q R+SGEP+IIHP++VA IL Sbjct: 16 ARSYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGIL 61
>RELA_MYXXA (O52177) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 757 Score = 50.1 bits (118), Expect = 5e-06 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Frame = +1 Query: 280 EPFDLVSPETLWESLRPAISYLQPE-ELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEV 456 + +D S + E P +S P+ +L+ + A + + H GQ R+SGEP+++HP+EV Sbjct: 11 QSYDCSSFDDSPERHPPTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEV 70 Query: 457 ARILGE 474 A ILGE Sbjct: 71 AGILGE 76
>SPOT_SHIFL (P0AG26) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 50.1 bits (118), Expect = 5e-06 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +1 Query: 310 LWESLRPAI-SYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 L+ESL I +YL +++ + A +A +AH GQ R SGEP+I HPV VA IL E Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAE 58
>SPOT_ECOLI (P0AG24) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 50.1 bits (118), Expect = 5e-06 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +1 Query: 310 LWESLRPAI-SYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 L+ESL I +YL +++ + A +A +AH GQ R SGEP+I HPV VA IL E Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAE 58
>SPOT_ECO57 (P0AG25) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 702 Score = 50.1 bits (118), Expect = 5e-06 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%) Frame = +1 Query: 310 LWESLRPAI-SYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 L+ESL I +YL +++ + A +A +AH GQ R SGEP+I HPV VA IL E Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAE 58
>RELA_STREQ (Q54089) Putative GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) (Stringent response-like protein) Length = 739 Score = 46.2 bits (108), Expect = 7e-05 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = +1 Query: 331 AISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 A Y+ + FV AL A AH Q R+SGEP+I+HP++VA IL + Sbjct: 16 AAKYMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILAD 63
>SPOT_AQUAE (O67012) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 696 Score = 43.5 bits (101), Expect = 5e-04 Identities = 23/56 (41%), Positives = 33/56 (58%) Frame = +1 Query: 307 TLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 +L E L +S+ P+ + A + A E H QKR++GEP+IIHP+ VA L E Sbjct: 8 SLEEDLEKLLSHY-PQHAEEIQRAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAE 62
>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 841 Score = 42.0 bits (97), Expect = 0.001 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = +1 Query: 304 ETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 E L +R ++ L + A ++A H GQKR+SG+P+I HP+ V IL E Sbjct: 103 EPLLRIVRANDPKIETSTLRQIEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAE 159
>RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 847 Score = 42.0 bits (97), Expect = 0.001 Identities = 24/72 (33%), Positives = 38/72 (52%) Frame = +1 Query: 259 RVSCYSSEPFDLVSPETLWESLRPAISYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFI 438 R+ + P++ V E L +R ++ L + A ++A H GQKR+SG+P+I Sbjct: 92 RLGVQRANPYNPVL-EPLLRIVRGNDPKIETSTLRQIERAYQVAERWHRGQKRKSGDPYI 150 Query: 439 IHPVEVARILGE 474 HP+ V IL E Sbjct: 151 THPLAVTTILAE 162
>RELA_MYCLE (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 787 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/39 (48%), Positives = 26/39 (66%) Frame = +1 Query: 358 LNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 L+ V A ++A + H Q RRSG+P+I HP+ VA IL E Sbjct: 77 LSIVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAE 115
>SPOT_BORBU (O51216) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 667 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = +1 Query: 337 SYLQPEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 +Y E + AL++A + H GQ R SGEP+IIHP+ V+ L + Sbjct: 30 TYKDEFERKSIFKALEIAEQLHYGQYRESGEPYIIHPIMVSLFLAK 75
>SPOT_HAEIN (P43811) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 677 Score = 39.7 bits (91), Expect = 0.007 Identities = 17/30 (56%), Positives = 22/30 (73%) Frame = +1 Query: 385 LAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 +A +AH GQ R SGEP+I HPV VA I+ + Sbjct: 2 IARDAHEGQFRSSGEPYITHPVAVASIIAQ 31
>RELA_MYCTU (P66014) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 790 Score = 38.9 bits (89), Expect = 0.012 Identities = 17/40 (42%), Positives = 27/40 (67%) Frame = +1 Query: 355 ELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 +L+ + A ++A + H Q R+SG+P+I HP+ VA IL E Sbjct: 79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAE 118
>RELA_MYCBO (P66015) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 790 Score = 38.9 bits (89), Expect = 0.012 Identities = 17/40 (42%), Positives = 27/40 (67%) Frame = +1 Query: 355 ELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 +L+ + A ++A + H Q R+SG+P+I HP+ VA IL E Sbjct: 79 DLSILQRAYEVADQRHASQLRQSGDPYITHPLAVANILAE 118
>SPOT_SYNY3 (P74007) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 760 Score = 38.9 bits (89), Expect = 0.012 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +1 Query: 376 ALKLAYEAHNGQKRRSGEPFIIHPVEVARIL 468 A AY+ H Q+R+SGEP+I HPV VA +L Sbjct: 57 AFCFAYDLHAQQRRKSGEPYIAHPVAVAGLL 87
>SPOT_MYCPN (P75386) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 733 Score = 37.0 bits (84), Expect = 0.045 Identities = 19/42 (45%), Positives = 24/42 (57%) Frame = +1 Query: 349 PEELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 PE + + AL + + H QKR SGEPF IHP+ A L E Sbjct: 34 PEVVALITKALDYSKKWHGEQKRLSGEPFFIHPLRTALRLVE 75
>SPOT_MYCGE (P47520) Probable guanosine-3',5'-bis(diphosphate)| 3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 720 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +1 Query: 355 ELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 E+ ++ A A H QKR SGEPF IHP+ A L E Sbjct: 23 EIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVE 62
>YCB8_PSEDE (P29941) Hypothetical 19.2 kDa protein in cobO 3'region (ORF8)| Length = 175 Score = 35.8 bits (81), Expect = 0.10 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%) Frame = +1 Query: 358 LNFVHDALKLAYEAHNGQKRR-SGEPFIIHPVEVARIL 468 ++ + AL+ A AH QKR+ G P+I+HP+ VA I+ Sbjct: 11 IDLENSALQFATRAHGEQKRKYDGRPYIVHPIAVAEIV 48
>P73L_MOUSE (O88898) Tumor protein p73-like (p73L) (p63)| (Transformation-related protein 63) Length = 680 Score = 34.3 bits (77), Expect = 0.29 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Frame = +1 Query: 226 RYWSTPVKSMWRVSCY------SSEPFDLVSPET---LWESLRPAISYLQPEELNFVHD 375 R+ TP W+ S Y S++ + +SPE +W+ L I +QP ELNFV + Sbjct: 21 RFIETPAHFSWKESYYRSAMSQSTQTSEFLSPEVFQHIWDFLEQPICSVQPIELNFVDE 79
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 33.9 bits (76), Expect = 0.38 Identities = 21/60 (35%), Positives = 29/60 (48%) Frame = +1 Query: 31 TGALASTTQCSSCSHAEAVGGGRWRGRPRQSNNNTLLHITWPEETNKGKLGHGSSASFVS 210 +G +STT S S A G G G P + N + L E T +LGHG S +++S Sbjct: 1643 SGDFSSTTDVSGESIAATTGSGESSGLPEVTLNTSELVEGVTEPTVSQELGHGPSMTYIS 1702
>RELA_CORGL (O87331) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP| 3'-pyrophosphotransferase) (ppGpp synthetase I) ((P)ppGpp synthetase) Length = 760 Score = 33.5 bits (75), Expect = 0.50 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 355 ELNFVHDALKLAYEAHNGQKRRSGEPFIIHPVEVARILGE 474 ++ + A A H+G R+SG+P+I HP+ VA I E Sbjct: 51 DVQVLERAYDTAERLHDGVIRKSGDPYITHPLAVATIAAE 90
>TP4AP_MOUSE (Q9JLV2) Trpc4-associated protein (Trp4-associated protein) (Short| transient receptor potential channel 4-associated protein) (TNF-receptor ubiquitous scaffolding/signaling protein) (TRUSS protein) (TAP1 protein) (Rabex-5/Rin2-interacting pro Length = 797 Score = 32.7 bits (73), Expect = 0.85 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 1/109 (0%) Frame = +1 Query: 76 AEAVGGGRWRGRPRQSNNNTLLHITWPEETNKGKL-GHGSSASFVSSGKKIRYWSTPVKS 252 A A G W GRPR N LL + + T +G + + +F++ K+ WS + Sbjct: 20 ATAAAWGGWGGRPRP--GNILLQLRQGQLTGRGLVRAVQFTETFLTERDKLSKWSGIPQL 77 Query: 253 MWRVSCYSSEPFDLVSPETLWESLRPAISYLQPEELNFVHDALKLAYEA 399 + ++ S D V +++ + + P +S E + FV + K EA Sbjct: 78 LLKLYATSHLHSDFVECQSILKEISPLLSM---EAMAFVTEDRKFTQEA 123
>P73L_HUMAN (Q9H3D4) Tumor protein p73-like (p73L) (p63) (Tumor protein 63)| (TP63) (p51) (p40) (Keratinocyte transcription factor KET) (Chronic ulcerative stomatitis protein) (CUSP) Length = 680 Score = 32.7 bits (73), Expect = 0.85 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Frame = +1 Query: 226 RYWSTPVKSMWRVSCY------SSEPFDLVSPET---LWESLRPAISYLQPEELNFVHD 375 R+ TP W+ S Y S++ + +SPE +W+ L I +QP +LNFV + Sbjct: 21 RFVETPAHFSWKESYYRSTMSQSTQTNEFLSPEVFQHIWDFLEQPICSVQPIDLNFVDE 79
>P73L_RAT (Q9JJP6) Tumor protein p73-like (p73L) (p63)| (Transformation-related protein 63) (TP63) (Keratinocyte transcription factor KET) Length = 680 Score = 32.3 bits (72), Expect = 1.1 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 9/59 (15%) Frame = +1 Query: 226 RYWSTPVKSMWRVSCY------SSEPFDLVSPET---LWESLRPAISYLQPEELNFVHD 375 R+ TP W+ S Y S++ + +SPE +W+ L I +QP +LNFV + Sbjct: 21 RFIETPSHFSWKESYYRSAMSQSTQTSEFLSPEVFQHIWDFLEQPICSVQPIDLNFVDE 79
>SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase| (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate guanosine-3'-pyrophosphohydrolase) Length = 749 Score = 31.6 bits (70), Expect = 1.9 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 340 YLQPEE-LNFVHDALKLAYEAHNGQKRRSGEPFIIHPV 450 Y++ E L + A + A E H+GQ R SG +IIHP+ Sbjct: 17 YIKDEATLKEIQKAYEYAEEKHHGQVRNSGARYIIHPL 54
>TP4AP_HUMAN (Q8TEL6) Trpc4-associated protein (Short transient receptor| potential channel 4-associated protein) (Trp4-associated protein) (TAP1 protein) (TNF-receptor ubiquitous scaffolding/signaling protein) (TRUSS protein) Length = 797 Score = 30.0 bits (66), Expect = 5.5 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 1/110 (0%) Frame = +1 Query: 70 SHAEAVGGGRWRGRPRQSNNNTLLHITWPEETNKGKL-GHGSSASFVSSGKKIRYWSTPV 246 S A G W GRPR N LL + + T +G + + +F++ K WS Sbjct: 18 SAATVAAWGGWGGRPRP--GNILLQLRQGQLTGRGLVRAVQFTETFLTERDKQSKWSGIP 75 Query: 247 KSMWRVSCYSSEPFDLVSPETLWESLRPAISYLQPEELNFVHDALKLAYE 396 + + ++ S D V + + + + P +S E + FV + KL E Sbjct: 76 QLLLKLHTTSHLHSDFVECQNILKEISPLLSM---EAMAFVTEERKLTQE 122
>RPOA1_METTW (P09846) DNA-directed RNA polymerase subunit A' (EC 2.7.7.6)| Length = 865 Score = 29.3 bits (64), Expect = 9.4 Identities = 23/63 (36%), Positives = 31/63 (49%) Frame = +1 Query: 34 GALASTTQCSSCSHAEAVGGGRWRGRPRQSNNNTLLHITWPEETNKGKLGHGSSASFVSS 213 GA+ + TQ ++C ++V GGR R +N TL H KG+LG S FV S Sbjct: 723 GAMLNLTQITACVGQQSVHGGR---ITRGYDNRTLPHF------KKGELG-AKSRGFVHS 772 Query: 214 GKK 222 K Sbjct: 773 SYK 775 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,796,544 Number of Sequences: 219361 Number of extensions: 1862930 Number of successful extensions: 4966 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4817 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4966 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
