ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bah62k14 |
|---|---|
| Clone Library Name | barley_pub |
>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor| Length = 589 Score = 125 bits (313), Expect = 1e-28 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 10/192 (5%) Frame = +3 Query: 9 VAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRV 188 V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ H+ F + ++ DR+ Sbjct: 116 VEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRI 174 Query: 189 IEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEV 359 I NV +L L D+ + + Y+V+W ET + P LE+ Sbjct: 175 IFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRRRADDGGFFPRTLEI 234 Query: 360 HWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXXX-------SGWKYIH 518 HW SIINS V V LL GF+A ILMRVL+ND +Y +GWK IH Sbjct: 235 HWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIH 294 Query: 519 GDVFRFPKNKSL 554 DVFRFP + L Sbjct: 295 TDVFRFPPCRGL 306
>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 125 bits (313), Expect = 1e-28 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 10/192 (5%) Frame = +3 Query: 9 VAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRV 188 V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ H+ F + ++ DR+ Sbjct: 116 VEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRI 174 Query: 189 IEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEV 359 I NV +L L D+ + + Y+V+W ET + P LE+ Sbjct: 175 IFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSVEHRSDRRRGDDGGFFPRTLEI 234 Query: 360 HWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXXX-------SGWKYIH 518 HW SIINS V V LL GF+A ILMRVL+ND +Y +GWK IH Sbjct: 235 HWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIH 294 Query: 519 GDVFRFPKNKSL 554 DVFRFP + L Sbjct: 295 TDVFRFPPYRGL 306
>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor| (hMP70) Length = 606 Score = 124 bits (310), Expect = 2e-28 Identities = 71/192 (36%), Positives = 98/192 (51%), Gaps = 10/192 (5%) Frame = +3 Query: 9 VAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRV 188 V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ H+ F + ++ DR+ Sbjct: 116 VEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFHGDRI 174 Query: 189 IEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEV 359 I NV +L L D+ + + Y+V+W ET + P LE+ Sbjct: 175 IFANVSVRDVKPHSLDGLRPDEFLGLTHTYSVRWSETSVERRSDRRRGDDGGFFPRTLEI 234 Query: 360 HWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXX-------XSGWKYIH 518 HW SIINS V V LL GF+A ILMRVL+ND +Y +GWK IH Sbjct: 235 HWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIH 294 Query: 519 GDVFRFPKNKSL 554 DVFRFP + L Sbjct: 295 TDVFRFPPYRGL 306
>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor| Length = 606 Score = 122 bits (306), Expect = 7e-28 Identities = 71/192 (36%), Positives = 96/192 (50%), Gaps = 10/192 (5%) Frame = +3 Query: 9 VAKFRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRV 188 V + R A+ + YYF+ DDLP+ GF+G +E+ G P K L+ H+ F + + DR+ Sbjct: 116 VEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFL-PHSHKIGLWTHLDFHLEFRGDRI 174 Query: 189 IEINVHTDQ---SALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEV 359 I NV +L L D+ + + Y+V+W ET P LE+ Sbjct: 175 IFANVSVRDVKPHSLDGLRPDEFLGLTHAYSVRWSETSVERRSDRRHGDDGGFFPRTLEI 234 Query: 360 HWFSIINSCVTVLLLTGFLATILMRVLKNDFVKYXXXXXXXXXXX-------XSGWKYIH 518 HW SIINS V V LL GF+A ILMRVL+ND +Y +GWK IH Sbjct: 235 HWLSIINSMVLVFLLVGFVAVILMRVLRNDLARYNLDEETTSAGSGDDFDQGDNGWKIIH 294 Query: 519 GDVFRFPKNKSL 554 DVFRFP + L Sbjct: 295 TDVFRFPPYRGL 306
>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor| Length = 587 Score = 120 bits (300), Expect = 3e-27 Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 4/176 (2%) Frame = +3 Query: 18 FRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEI 197 F A+ Y++QMY DDLP+WG +G+ ++ G+ YYL+ + +I +N +R++++ Sbjct: 118 FVYAIKNHYWYQMYIDDLPIWGIVGEADENGED------YYLWTYKKLEIGFNGNRIVDV 171 Query: 198 NVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSII 377 N+ ++ V L + ++ + Y+VKWK++ FE R +KY S H +HWFSI Sbjct: 172 NLTSEGK--VKLVPNTKIQMS--YSVKWKKSDVKFEDRFDKYLDPSFFQHR--IHWFSIF 225 Query: 378 NSCVTVLLLTGFLATILMRVLKNDFVKYX----XXXXXXXXXXXSGWKYIHGDVFR 533 NS + V+ L G ++ ILMR L+ D+ +Y GWK +HGDVFR Sbjct: 226 NSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFR 281
>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor| (SM-11044-binding protein) (EP70-P-iso) Length = 589 Score = 120 bits (300), Expect = 3e-27 Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 4/176 (2%) Frame = +3 Query: 18 FRNAVAKDYYFQMYYDDLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEI 197 F A+ Y++QMY DDLP+WG +G+ ++ G+ YYL+ + +I +N +R++++ Sbjct: 120 FVYAIKNHYWYQMYIDDLPIWGIVGEADENGED------YYLWTYKKLEIGFNGNRIVDV 173 Query: 198 NVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSII 377 N+ ++ V L + ++ + Y+VKWK++ FE R +KY S H +HWFSI Sbjct: 174 NLTSEGK--VKLVPNTKIQMS--YSVKWKKSDVKFEDRFDKYLDPSFFQHR--IHWFSIF 227 Query: 378 NSCVTVLLLTGFLATILMRVLKNDFVKYX----XXXXXXXXXXXSGWKYIHGDVFR 533 NS + V+ L G ++ ILMR L+ D+ +Y GWK +HGDVFR Sbjct: 228 NSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFR 283
>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4| Length = 625 Score = 85.5 bits (210), Expect = 9e-17 Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 9/153 (5%) Frame = +3 Query: 111 KPDPSEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALV---------DLTEDKEVNVDF 263 + D E + + YR + F+++ + R+ ++ S + ++ KE + F Sbjct: 174 REDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKSSCTLPEGTNSSPQEIDPTKENQLYF 233 Query: 264 LYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATILMRVLK 443 Y+V W+E+ + R + Y + S++ ++HWFSIINS V V L+G L+ I++R L+ Sbjct: 234 TYSVHWEESDIKWASRWDTYLTMSDV----QIHWFSIINSVVVVFFLSGILSMIIIRTLR 289 Query: 444 NDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPK 542 D Y SGWK +HGDVFR P+ Sbjct: 290 KDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQ 322
>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane| protein) (Pheromone alpha-factor transporter) (Acidic 24 kDa late endocytic intermediate component) Length = 667 Score = 69.7 bits (169), Expect = 5e-12 Identities = 38/103 (36%), Positives = 54/103 (52%) Frame = +3 Query: 231 LTEDKEVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTG 410 L E + V F Y+VK+ E+ T + R +KY + + WFS+IN + V+LL+ Sbjct: 265 LDEGNDNEVYFTYSVKFNESATSWATRWDKYLHV----YDPSIQWFSLINFSLVVVLLSS 320 Query: 411 FLATILMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFP 539 + L+R LK+DF +Y SGWK HGDVFR P Sbjct: 321 VVIHSLLRALKSDFARYNELNLDDDFQEDSGWKLNHGDVFRSP 363
>TM9S2_RAT (Q66HG5) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 66.6 bits (161), Expect = 4e-11 Identities = 35/103 (33%), Positives = 52/103 (50%) Frame = +3 Query: 246 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 425 E+ + + Y++ ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSISFEEEKNIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 426 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPKNKSL 554 ++R L D +Y GWK +HGD+FR P+ L Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGML 364
>TM9S2_PONPY (Q5R8Y6) Transmembrane 9 superfamily protein member 2 precursor| Length = 663 Score = 66.6 bits (161), Expect = 4e-11 Identities = 36/103 (34%), Positives = 52/103 (50%) Frame = +3 Query: 246 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 425 E+ + + Y+V ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSVSFEEDKKIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 426 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPKNKSL 554 ++R L D +Y GWK +HGD+FR P+ L Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGML 364
>TM9S2_HUMAN (Q99805) Transmembrane 9 superfamily protein member 2 precursor| (p76) Length = 663 Score = 66.6 bits (161), Expect = 4e-11 Identities = 36/103 (34%), Positives = 52/103 (50%) Frame = +3 Query: 246 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 425 E+ + + Y+V ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 264 EIKIAYTYSVSFEEDDKIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 321 Query: 426 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPKNKSL 554 ++R L D +Y GWK +HGD+FR P+ L Sbjct: 322 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGML 364
>TM9S2_MOUSE (P58021) Transmembrane 9 superfamily protein member 2 precursor| Length = 662 Score = 66.6 bits (161), Expect = 4e-11 Identities = 35/103 (33%), Positives = 52/103 (50%) Frame = +3 Query: 246 EVNVDFLYTVKWKETPTPFEKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLLTGFLATI 425 E+ + + Y++ ++E Y S MPH + WFSI+NS V VL L+G +A I Sbjct: 263 EIKIAYTYSISFEEEKNIRWASRWDYILES-MPH-THIQWFSIMNSLVIVLFLSGMVAMI 320 Query: 426 LMRVLKNDFVKYXXXXXXXXXXXXSGWKYIHGDVFRFPKNKSL 554 ++R L D +Y GWK +HGD+FR P+ L Sbjct: 321 MLRTLHKDIARYNQMDSTEDAQEEFGWKLVHGDIFRPPRKGML 363
>BLE1_PSEAE (P37321) Extended-spectrum beta-lactamase PER-1 precursor (EC| 3.5.2.6) Length = 308 Score = 36.2 bits (82), Expect = 0.064 Identities = 21/48 (43%), Positives = 29/48 (60%) Frame = -1 Query: 317 LHPLLERGRCLLPLDSVKEVHINLLVLRQVNQGTLVSVHIDLNNTVVI 174 L PLL P+ SV ++H+ +LVL QV+QG L DLN TV++ Sbjct: 56 LEPLLINPFEKFPMQSVFKLHLAMLVLHQVDQGKL-----DLNQTVIV 98
>HAT1_ASPOR (Q2UEX1) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 511 Score = 32.3 bits (72), Expect = 0.93 Identities = 22/83 (26%), Positives = 36/83 (43%) Frame = +3 Query: 96 VEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTV 275 V+K DP+E +YY +R ++ L+ R +I + + S ++ E+ NV+ Y Sbjct: 384 VKKYNATDPNERRYYWWRMLVKQRLFKRSR--DILIQLEMSDRIEKLEETVTNVEEGYEA 441 Query: 276 KWKETPTPFEKRMEKYSSSSNMP 344 K E M K S P Sbjct: 442 LIKVFTAREEALMAKQEESGESP 464
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 32.0 bits (71), Expect = 1.2 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%) Frame = +3 Query: 186 VIEINVHTDQSALVDLTEDKEVNVDFLYTV-KWKETPTPFEKRMEKYSSSSNMPH--HLE 356 V+ +H D++ L EV D Y++ TPTPF+ +EKY +P HLE Sbjct: 487 VVTTPLHRDKTPLHQKYPSSEVLPDQKYSMDNTPHTPTPFKNALEKYGPLKPLPQTPHLE 546 Query: 357 VHWFSIINS 383 ++ S Sbjct: 547 EDLKEVLRS 555
>SSK22_YEAST (P25390) Serine/threonine-protein kinase SSK22 (EC 2.7.11.1) (MAP| kinase kinase kinase SSK22) (Suppressor of sensor kinase 22) Length = 1331 Score = 31.6 bits (70), Expect = 1.6 Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Frame = +2 Query: 305 EEDGEVFQLLQHAASLGGSLVLH-YKFLCYGPPPHRVPGNNPHASSE 442 E++ EVF+L +SLG +VL+ + + + P +++PGNN AS+E Sbjct: 713 EKNNEVFELEVALSSLGALVVLYPGEPVVWDGPVYKLPGNNLFASNE 759
>HAT1_ASPFU (Q4X0W8) Histone acetyltransferase type B catalytic subunit (EC| 2.3.1.48) Length = 570 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/75 (30%), Positives = 36/75 (48%) Frame = +3 Query: 96 VEKGGKPDPSEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTV 275 ++K DP+E +YY +R + LY + I I + D+ + E+ NV+ Y V Sbjct: 447 IKKHRAEDPNERRYYWWRMLTKQRLYKRSKDILIQLDLDER--IQKLEETVSNVEEGYEV 504 Query: 276 KWKETPTPFEKRMEK 320 KE F +R EK Sbjct: 505 LLKE----FSEREEK 515
>THRB_BOVIN (P00735) Prothrombin precursor (EC 3.4.21.5) (Coagulation factor| II) [Contains: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain] Length = 625 Score = 30.4 bits (67), Expect = 3.5 Identities = 23/94 (24%), Positives = 41/94 (43%) Frame = +3 Query: 123 SEWKYYLYRHIIFDILYNNDRVIEINVHTDQSALVDLTEDKEVNVDFLYTVKWKETPTPF 302 S W+ L+R ++L + + V T L+ DK VD L K + T + Sbjct: 378 SPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTVDDLLVRIGKHSRTRY 437 Query: 303 EKRMEKYSSSSNMPHHLEVHWFSIINSCVTVLLL 404 E+++EK S + H +W ++ + +L L Sbjct: 438 ERKVEKISMLDKIYIHPRYNWKENLDRDIALLKL 471
>IF2_BUCBP (Q89AF5) Translation initiation factor IF-2| Length = 876 Score = 30.0 bits (66), Expect = 4.6 Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 6/104 (5%) Frame = -1 Query: 389 NTRIYNGEPMNLQVMRHVGGAGILLHPLLERGRCLLPLDSVKEVHINL--LVLRQVNQGT 216 N + E + L+ + + +G+++ L++GR + +KE +N +VL G Sbjct: 535 NAILTQSEMLELKSISNGMASGLVIESYLDKGRGPTAIILIKEGKLNKGDIVLCGFEYGK 594 Query: 215 LVSVHIDLNNTVVIVEDVKDNVPVEVI----LPLARVRLASLLD 96 + S+ DL N V + ++PV+++ +PLA ++ + D Sbjct: 595 VRSIRDDLENE---VNSIGPSIPVKILGLSGIPLAGDKIVVVRD 635
>MET10_YEAST (P39692) Sulfite reductase [NADPH] flavoprotein component (EC| 1.8.1.2) Length = 1035 Score = 29.6 bits (65), Expect = 6.0 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 7/53 (13%) Frame = +3 Query: 30 VAKDYYFQMYYD-------DLPLWGFIGKVEKGGKPDPSEWKYYLYRHIIFDI 167 +AK F+ Y+ DLP+ F+ KV++ + P+++ Y++ HI FDI Sbjct: 626 IAKKLSFKEAYEVENKLRPDLPVKNFVVKVKENRRVTPADYDRYIF-HIEFDI 677
>R1AB_CVH22 (Q05002) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p9; p87; p195 (EC 3.4.22.-) (Papain-like proteinases 1/2) (PL1-PRO/PL2-PRO); Peptide HD2; 3C-like proteinase (EC 3.4 Length = 6758 Score = 29.3 bits (64), Expect = 7.9 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +3 Query: 6 DVAKFRNAVAKDYYFQMYYDDLPLWGFIGKV 98 D F++A+ DY + Y D+ WG++G + Sbjct: 5814 DYCCFKHALGCDYVYNPYVIDIQQWGYVGSL 5844 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,513,442 Number of Sequences: 219361 Number of extensions: 1505191 Number of successful extensions: 4686 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4518 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4669 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
